View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6975_high_23 (Length: 248)

Name: NF6975_high_23
Description: NF6975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6975_high_23
NF6975_high_23
[»] chr3 (117 HSPs)
chr3 (1-231)||(10956280-10956510)
chr3 (1-226)||(18099423-18099648)
chr3 (1-201)||(10958576-10958776)
chr3 (4-226)||(22114561-22114783)
chr3 (1-228)||(5522868-5523095)
chr3 (1-231)||(5191427-5191657)
chr3 (1-226)||(26720327-26720552)
chr3 (5-226)||(1321220-1321441)
chr3 (1-183)||(3859350-3859532)
chr3 (1-226)||(32264292-32264522)
chr3 (1-192)||(45882752-45882943)
chr3 (1-226)||(18097153-18097363)
chr3 (1-161)||(18162508-18162667)
chr3 (1-158)||(11162997-11163154)
chr3 (1-118)||(15780747-15780864)
chr3 (11-226)||(24177058-24177274)
chr3 (1-161)||(11170248-11170408)
chr3 (1-160)||(48361924-48362082)
chr3 (1-160)||(24979552-24979711)
chr3 (1-159)||(32218941-32219099)
chr3 (4-162)||(10084645-10084807)
chr3 (1-130)||(12268219-12268348)
chr3 (4-162)||(10191565-10191727)
chr3 (1-161)||(35777266-35777425)
chr3 (1-84)||(53915749-53915832)
chr3 (1-109)||(6063699-6063809)
chr3 (137-226)||(25388656-25388745)
chr3 (86-199)||(5899545-5899657)
chr3 (1-121)||(6066049-6066170)
chr3 (1-109)||(38889935-38890044)
chr3 (1-84)||(51943292-51943375)
chr3 (1-83)||(4308534-4308616)
chr3 (1-75)||(6561740-6561814)
chr3 (156-226)||(10192401-10192470)
chr3 (1-83)||(43226008-43226090)
chr3 (86-199)||(5886070-5886182)
chr3 (138-226)||(38210126-38210214)
chr3 (138-226)||(50493735-50493823)
chr3 (1-81)||(1626936-1627016)
chr3 (1-81)||(53468708-53468788)
chr3 (1-84)||(1313331-1313413)
chr3 (1-104)||(28761681-28761784)
chr3 (1-80)||(43421668-43421747)
chr3 (156-226)||(10085481-10085550)
chr3 (1-83)||(43228213-43228295)
chr3 (1-83)||(51727259-51727341)
chr3 (145-217)||(6063866-6063939)
chr3 (1-109)||(50493895-50494003)
chr3 (1-81)||(880705-880785)
chr3 (1-81)||(28137548-28137628)
chr3 (1-81)||(47701848-47701928)
chr3 (13-85)||(53597161-53597232)
chr3 (1-105)||(455802-455911)
chr3 (1-105)||(458179-458288)
chr3 (1-105)||(4104148-4104257)
chr3 (144-226)||(53896613-53896695)
chr3 (1-84)||(53917917-53918000)
chr3 (53-111)||(13893287-13893345)
chr3 (10-107)||(23633357-23633455)
chr3 (1-83)||(35918202-35918284)
chr3 (1-81)||(890024-890104)
chr3 (45-109)||(6719408-6719472)
chr3 (8-80)||(27635887-27635959)
chr3 (1-81)||(43423716-43423796)
chr3 (50-109)||(5886181-5886240)
chr3 (50-109)||(5899656-5899715)
chr3 (51-110)||(46966938-46966997)
chr3 (1-80)||(51675008-51675087)
chr3 (10-80)||(3306724-3306794)
chr3 (52-109)||(25388794-25388851)
chr3 (1-81)||(3314608-3314688)
chr3 (1-81)||(5927017-5927097)
chr3 (1-81)||(28100294-28100374)
chr3 (1-81)||(28102255-28102335)
chr3 (1-105)||(746650-746761)
chr3 (1-80)||(6231374-6231453)
chr3 (86-161)||(38889861-38889936)
chr3 (168-231)||(6719532-6719597)
chr3 (1-84)||(25533355-25533446)
chr3 (1-83)||(27101434-27101520)
chr3 (10-81)||(31151271-31151344)
chr3 (2-83)||(39715392-39715472)
chr3 (13-85)||(4560530-4560602)
chr3 (51-107)||(26762863-26762919)
chr3 (1-81)||(36011751-36011831)
chr3 (52-108)||(38210265-38210321)
chr3 (1-81)||(47149148-47149233)
chr3 (1-81)||(53591119-53591199)
chr3 (1-81)||(54691827-54691906)
chr3 (86-161)||(6719471-6719546)
chr3 (168-226)||(11162950-11163008)
chr3 (10-85)||(23636947-23637022)
chr3 (168-226)||(35777222-35777280)
chr3 (17-83)||(6484307-6484373)
chr3 (52-105)||(10621846-10621900)
chr3 (23-81)||(28180948-28181006)
chr3 (27-109)||(53896475-53896557)
chr3 (10-107)||(1618917-1619018)
chr3 (53-105)||(42990181-42990234)
chr3 (45-81)||(4663843-4663879)
chr3 (46-108)||(562060-562123)
chr3 (168-226)||(6066195-6066253)
chr3 (51-106)||(16996705-16996760)
chr3 (1-40)||(30005806-30005845)
chr3 (168-226)||(38889817-38889875)
chr3 (1-40)||(42990269-42990308)
chr3 (51-133)||(47883178-47883260)
chr3 (51-85)||(13419796-13419830)
chr3 (45-83)||(25690653-25690691)
chr3 (52-105)||(41849041-41849095)
chr3 (51-84)||(11007978-11008011)
chr3 (50-83)||(27101562-27101595)
chr3 (53-85)||(1673895-1673927)
chr3 (51-107)||(7768474-7768530)
chr3 (175-226)||(11170204-11170255)
chr3 (13-85)||(13420437-13420509)
chr3 (51-106)||(25635318-25635374)
[»] chr4 (93 HSPs)
chr4 (1-226)||(22802989-22803213)
chr4 (1-226)||(36919840-36920067)
chr4 (1-226)||(31849854-31850079)
chr4 (1-226)||(48486172-48486397)
chr4 (1-226)||(51015099-51015324)
chr4 (1-226)||(24888649-24888874)
chr4 (1-228)||(36921749-36921977)
chr4 (1-195)||(37089626-37089823)
chr4 (1-226)||(5198273-5198498)
chr4 (48-228)||(3824875-3825055)
chr4 (1-205)||(22044645-22044848)
chr4 (1-226)||(24878842-24879067)
chr4 (1-226)||(24880304-24880529)
chr4 (1-231)||(38409047-38409283)
chr4 (1-226)||(5637720-5637947)
chr4 (1-226)||(40091670-40091895)
chr4 (1-198)||(22046940-22047135)
chr4 (1-199)||(9174401-9174599)
chr4 (13-226)||(619714-619927)
chr4 (1-159)||(47274647-47274805)
chr4 (1-199)||(11006492-11006694)
chr4 (1-161)||(11434873-11435033)
chr4 (1-226)||(9148113-9148331)
chr4 (1-161)||(22801117-22801276)
chr4 (1-180)||(52942701-52942881)
chr4 (1-158)||(7941240-7941399)
chr4 (10-175)||(8756513-8756679)
chr4 (86-226)||(18846984-18847124)
chr4 (86-199)||(11008932-11009045)
chr4 (86-199)||(9176836-9176949)
chr4 (1-83)||(6764835-6764917)
chr4 (1-83)||(40637070-40637152)
chr4 (138-226)||(16932213-16932301)
chr4 (1-109)||(18847123-18847231)
chr4 (1-80)||(56030443-56030522)
chr4 (1-83)||(36378288-36378370)
chr4 (1-84)||(14787686-14787771)
chr4 (140-228)||(16934569-16934657)
chr4 (138-226)||(22783170-22783258)
chr4 (1-93)||(9176729-9176821)
chr4 (1-109)||(16934398-16934506)
chr4 (1-81)||(19095880-19095960)
chr4 (1-81)||(24446834-24446914)
chr4 (1-81)||(38270241-38270321)
chr4 (1-105)||(17662489-17662598)
chr4 (10-104)||(18537734-18537829)
chr4 (1-83)||(14633316-14633397)
chr4 (1-83)||(47868397-47868479)
chr4 (1-81)||(2891314-2891395)
chr4 (138-226)||(22780805-22780893)
chr4 (1-109)||(16932044-16932152)
chr4 (1-84)||(5100992-5101075)
chr4 (168-223)||(22801262-22801317)
chr4 (1-104)||(38928433-38928536)
chr4 (1-84)||(44600093-44600176)
chr4 (10-107)||(15032800-15032898)
chr4 (1-105)||(53405100-53405208)
chr4 (1-81)||(3937464-3937543)
chr4 (1-105)||(47210995-47211106)
chr4 (1-83)||(2485127-2485210)
chr4 (1-105)||(24348187-24348296)
chr4 (1-80)||(33415742-33415821)
chr4 (1-80)||(37313321-37313400)
chr4 (45-107)||(40999246-40999308)
chr4 (10-107)||(16186100-16186199)
chr4 (10-75)||(19322701-19322766)
chr4 (1-81)||(12396100-12396180)
chr4 (1-81)||(12401062-12401142)
chr4 (1-81)||(18409602-18409681)
chr4 (45-122)||(25357593-25357671)
chr4 (51-107)||(52043735-52043791)
chr4 (1-83)||(16453305-16453387)
chr4 (1-81)||(6132871-6132950)
chr4 (1-83)||(8631674-8631760)
chr4 (1-94)||(11008821-11008918)
chr4 (1-77)||(41997494-41997570)
chr4 (1-105)||(18709418-18709531)
chr4 (51-133)||(4569899-4569980)
chr4 (52-105)||(22132705-22132759)
chr4 (168-226)||(7941192-7941251)
chr4 (168-226)||(11434828-11434887)
chr4 (53-105)||(22134937-22134990)
chr4 (51-107)||(28453658-28453715)
chr4 (10-107)||(12102061-12102161)
chr4 (51-111)||(16638652-16638712)
chr4 (53-109)||(22780688-22780744)
chr4 (53-109)||(22783053-22783109)
chr4 (55-106)||(26557563-26557614)
chr4 (45-83)||(36380370-36380408)
chr4 (10-83)||(16455283-16455356)
chr4 (23-104)||(18535106-18535187)
chr4 (1-33)||(22132645-22132677)
chr4 (1-33)||(22134870-22134902)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-226)||(2688-2913)
[»] chr7 (80 HSPs)
chr7 (1-226)||(27306484-27306709)
chr7 (1-226)||(44373-44598)
chr7 (1-226)||(35438-35663)
chr7 (1-226)||(18567422-18567647)
chr7 (1-226)||(31435302-31435527)
chr7 (1-226)||(3878381-3878611)
chr7 (1-226)||(25542339-25542564)
chr7 (1-161)||(1049550-1049710)
chr7 (13-189)||(22392319-22392495)
chr7 (1-161)||(26804448-26804603)
chr7 (1-161)||(40836997-40837158)
chr7 (10-132)||(7188445-7188568)
chr7 (138-217)||(2935137-2935217)
chr7 (138-217)||(9027540-9027620)
chr7 (138-217)||(22136945-22137025)
chr7 (138-217)||(40551972-40552052)
chr7 (138-205)||(22107947-22108014)
chr7 (1-80)||(37412383-37412462)
chr7 (138-205)||(40549707-40549774)
chr7 (138-226)||(1047356-1047444)
chr7 (1-97)||(22251797-22251893)
chr7 (1-84)||(13099731-13099814)
chr7 (1-80)||(21990106-21990184)
chr7 (1-84)||(42331254-42331337)
chr7 (1-105)||(31156166-31156271)
chr7 (1-81)||(44724533-44724613)
chr7 (1-104)||(11355189-11355292)
chr7 (1-104)||(20137364-20137467)
chr7 (1-81)||(21679981-21680061)
chr7 (1-85)||(22828888-22828972)
chr7 (55-123)||(45366458-45366526)
chr7 (1-84)||(443546-443629)
chr7 (1-105)||(3035646-3035755)
chr7 (1-105)||(28485491-28485600)
chr7 (1-105)||(38393911-38394020)
chr7 (1-75)||(24258423-24258497)
chr7 (168-222)||(26804408-26804462)
chr7 (1-81)||(4296190-4296271)
chr7 (55-198)||(42006404-42006545)
chr7 (1-81)||(42223110-42223191)
chr7 (1-79)||(7094677-7094759)
chr7 (1-79)||(7470277-7470359)
chr7 (171-226)||(1049699-1049754)
chr7 (13-80)||(3677235-3677301)
chr7 (14-107)||(20091808-20091903)
chr7 (2-81)||(21678020-21678099)
chr7 (1-84)||(20297309-20297396)
chr7 (1-79)||(7092430-7092512)
chr7 (1-79)||(7472235-7472317)
chr7 (1-105)||(11757153-11757263)
chr7 (1-105)||(18345466-18345575)
chr7 (1-83)||(48457601-48457687)
chr7 (1-105)||(7349528-7349639)
chr7 (1-105)||(7351907-7352018)
chr7 (1-81)||(9680768-9680853)
chr7 (10-80)||(24465503-24465574)
chr7 (1-84)||(20299405-20299493)
chr7 (10-79)||(24817613-24817682)
chr7 (11-81)||(39146252-39146322)
chr7 (1-79)||(20625990-20626072)
chr7 (1-79)||(20629881-20629963)
chr7 (1-79)||(20642300-20642382)
chr7 (1-81)||(24748548-24748628)
chr7 (168-226)||(40837144-40837202)
chr7 (23-85)||(30906327-30906389)
chr7 (52-105)||(38396215-38396269)
chr7 (52-105)||(43253830-43253884)
chr7 (53-105)||(1606399-1606452)
chr7 (13-85)||(6332176-6332248)
chr7 (53-109)||(1047239-1047295)
chr7 (53-109)||(2935279-2935335)
chr7 (53-109)||(9027411-9027467)
chr7 (53-109)||(22108087-22108143)
chr7 (53-109)||(22137098-22137154)
chr7 (53-109)||(40549847-40549903)
chr7 (53-109)||(40552125-40552181)
chr7 (1-40)||(1849976-1850015)
chr7 (57-105)||(1849894-1849943)
chr7 (55-107)||(6048599-6048652)
chr7 (1-81)||(25276095-25276175)
[»] chr1 (90 HSPs)
chr1 (1-226)||(10400085-10400310)
chr1 (1-217)||(51749845-51750063)
chr1 (1-226)||(51752163-51752389)
chr1 (1-217)||(13761644-13761861)
chr1 (1-226)||(15823345-15823570)
chr1 (1-226)||(6823682-6823909)
chr1 (1-226)||(20302257-20302483)
chr1 (1-226)||(28842292-28842519)
chr1 (1-226)||(13214880-13215105)
chr1 (1-226)||(28840477-28840704)
chr1 (1-226)||(28207323-28207548)
chr1 (1-226)||(41646719-41646944)
chr1 (1-165)||(47451508-47451672)
chr1 (10-226)||(30790659-30790876)
chr1 (5-219)||(3579877-3580093)
chr1 (10-226)||(39462317-39462534)
chr1 (1-161)||(6822879-6823039)
chr1 (1-158)||(38925735-38925892)
chr1 (3-160)||(14098229-14098385)
chr1 (69-160)||(49687405-49687496)
chr1 (138-226)||(16225946-16226034)
chr1 (138-226)||(47177137-47177224)
chr1 (1-84)||(17324893-17324976)
chr1 (1-109)||(16231517-16231625)
chr1 (10-85)||(18800835-18800910)
chr1 (10-107)||(42922151-42922249)
chr1 (13-85)||(49495468-49495540)
chr1 (147-217)||(23783305-23783376)
chr1 (1-84)||(28998510-28998593)
chr1 (1-84)||(29004226-29004309)
chr1 (1-107)||(16226085-16226191)
chr1 (141-226)||(47179487-47179572)
chr1 (8-81)||(14183850-14183923)
chr1 (1-85)||(31423131-31423215)
chr1 (1-80)||(18307054-18307133)
chr1 (1-92)||(20291390-20291481)
chr1 (1-80)||(25248771-25248850)
chr1 (1-80)||(25251532-25251611)
chr1 (1-105)||(47906183-47906294)
chr1 (1-81)||(2617460-2617540)
chr1 (1-123)||(9241343-9241465)
chr1 (1-81)||(11457732-11457812)
chr1 (1-108)||(16428569-16428677)
chr1 (1-107)||(47177276-47177386)
chr1 (1-107)||(47179627-47179737)
chr1 (1-105)||(48665090-48665201)
chr1 (1-81)||(50076929-50077009)
chr1 (1-84)||(6995957-6996040)
chr1 (1-105)||(9463501-9463612)
chr1 (1-80)||(17318838-17318917)
chr1 (1-105)||(31735778-31735887)
chr1 (10-81)||(50079087-50079158)
chr1 (3-105)||(2510583-2510690)
chr1 (1-83)||(12302762-12302849)
chr1 (1-84)||(27337195-27337282)
chr1 (10-108)||(8347535-8347634)
chr1 (1-81)||(17186385-17186465)
chr1 (1-79)||(21948444-21948526)
chr1 (138-182)||(23783362-23783406)
chr1 (10-107)||(26613503-26613603)
chr1 (1-81)||(31489859-31489939)
chr1 (1-79)||(39932017-39932097)
chr1 (45-85)||(43104099-43104139)
chr1 (1-84)||(2949488-2949571)
chr1 (1-105)||(9459674-9459785)
chr1 (1-105)||(27339387-27339496)
chr1 (168-226)||(6822834-6822893)
chr1 (1-81)||(18839531-18839611)
chr1 (45-105)||(24325575-24325636)
chr1 (13-81)||(50248841-50248909)
chr1 (51-117)||(46782960-46783029)
chr1 (51-106)||(49958963-49959018)
chr1 (1-83)||(6756469-6756551)
chr1 (53-107)||(27916415-27916469)
chr1 (52-105)||(46432036-46432090)
chr1 (51-123)||(2401492-2401565)
chr1 (4-81)||(50307807-50307884)
chr1 (10-108)||(8349314-8349414)
chr1 (1-81)||(17324009-17324089)
chr1 (53-109)||(23783467-23783523)
chr1 (1-40)||(4131636-4131675)
chr1 (23-85)||(15669669-15669732)
chr1 (168-226)||(16231400-16231458)
chr1 (45-79)||(15295149-15295183)
chr1 (1-104)||(40133856-40133968)
chr1 (51-123)||(2393578-2393651)
chr1 (10-75)||(13127895-13127959)
chr1 (51-104)||(26979832-26979885)
chr1 (45-108)||(16431017-16431081)
chr1 (186-226)||(49687360-49687400)
[»] chr8 (55 HSPs)
chr8 (1-223)||(14807610-14807831)
chr8 (1-228)||(15067834-15068061)
chr8 (1-223)||(15072568-15072790)
chr8 (1-226)||(27826841-27827066)
chr8 (1-226)||(27829152-27829377)
chr8 (1-226)||(12517279-12517506)
chr8 (1-182)||(28251822-28252002)
chr8 (1-161)||(4423938-4424098)
chr8 (10-159)||(2468362-2468511)
chr8 (1-161)||(3886173-3886336)
chr8 (86-226)||(44720677-44720816)
chr8 (1-109)||(18810680-18810788)
chr8 (1-109)||(18812865-18812973)
chr8 (1-109)||(44720815-44720923)
chr8 (1-104)||(13858739-13858842)
chr8 (1-104)||(14419446-14419549)
chr8 (138-199)||(18812754-18812815)
chr8 (1-81)||(33541643-33541723)
chr8 (1-84)||(181534-181617)
chr8 (1-84)||(41382670-41382753)
chr8 (138-226)||(43079406-43079494)
chr8 (138-226)||(43081781-43081869)
chr8 (1-81)||(35872633-35872713)
chr8 (1-80)||(36865538-36865618)
chr8 (1-84)||(41384742-41384824)
chr8 (1-83)||(26775199-26775281)
chr8 (51-108)||(17847501-17847558)
chr8 (1-81)||(27107152-27107232)
chr8 (1-81)||(30480758-30480838)
chr8 (1-104)||(5622993-5623096)
chr8 (1-105)||(28283474-28283585)
chr8 (1-105)||(32339280-32339389)
chr8 (1-83)||(1225164-1225246)
chr8 (168-226)||(4423894-4423952)
chr8 (138-199)||(18810569-18810630)
chr8 (1-84)||(43530121-43530208)
chr8 (1-81)||(14477276-14477356)
chr8 (1-81)||(25952521-25952601)
chr8 (1-105)||(15809190-15809299)
chr8 (1-105)||(24873436-24873547)
chr8 (43-85)||(6375985-6376027)
chr8 (10-107)||(15185974-15186072)
chr8 (10-107)||(21482297-21482393)
chr8 (1-81)||(5372433-5372512)
chr8 (1-85)||(27911011-27911094)
chr8 (1-85)||(27957430-27957513)
chr8 (167-222)||(28252008-28252063)
chr8 (51-122)||(31035027-31035097)
chr8 (45-107)||(31162186-31162249)
chr8 (1-105)||(3873981-3874090)
chr8 (52-109)||(43081930-43081987)
chr8 (53-109)||(43079558-43079614)
chr8 (1-40)||(37214465-37214504)
chr8 (45-83)||(22684965-22685003)
chr8 (56-104)||(31574054-31574100)
[»] chr6 (63 HSPs)
chr6 (1-226)||(8995314-8995538)
chr6 (1-226)||(9019761-9019985)
chr6 (1-217)||(11983284-11983499)
chr6 (1-217)||(19227663-19227881)
chr6 (1-226)||(15530377-15530602)
chr6 (1-197)||(14507430-14507626)
chr6 (16-199)||(30729098-30729281)
chr6 (1-160)||(1072132-1072291)
chr6 (4-192)||(15541398-15541586)
chr6 (1-160)||(32279897-32280055)
chr6 (1-199)||(15532936-15533134)
chr6 (90-226)||(4816612-4816747)
chr6 (138-226)||(33308744-33308832)
chr6 (138-226)||(33311013-33311101)
chr6 (138-217)||(29755132-29755212)
chr6 (138-217)||(26068735-26068815)
chr6 (1-84)||(17852518-17852601)
chr6 (1-83)||(28241576-28241658)
chr6 (1-105)||(12195770-12195875)
chr6 (1-109)||(20915611-20915721)
chr6 (138-226)||(26066464-26066552)
chr6 (1-85)||(3390354-3390438)
chr6 (1-81)||(24338703-24338783)
chr6 (1-81)||(32447571-32447651)
chr6 (9-104)||(15346347-15346442)
chr6 (4-81)||(13057173-13057250)
chr6 (10-107)||(12186331-12186431)
chr6 (1-81)||(25477253-25477333)
chr6 (1-74)||(14459020-14459093)
chr6 (1-81)||(3233986-3234065)
chr6 (81-184)||(24192630-24192733)
chr6 (1-83)||(1230504-1230586)
chr6 (1-79)||(3632193-3632271)
chr6 (14-85)||(3028117-3028189)
chr6 (52-109)||(4816551-4816608)
chr6 (1-105)||(30034858-30034967)
chr6 (81-184)||(24191533-24191636)
chr6 (1-105)||(2629140-2629250)
chr6 (4-81)||(13039733-13039810)
chr6 (45-122)||(16455723-16455800)
chr6 (1-81)||(3630119-3630199)
chr6 (1-81)||(12161810-12161889)
chr6 (53-109)||(26068606-26068662)
chr6 (1-40)||(26065006-26065045)
chr6 (1-40)||(26084975-26085014)
chr6 (1-105)||(30967152-30967260)
chr6 (10-107)||(12937458-12937559)
chr6 (53-107)||(26066335-26066389)
chr6 (168-226)||(32279852-32279910)
chr6 (1-74)||(13870677-13870749)
chr6 (51-104)||(15366992-15367045)
chr6 (55-107)||(19696394-19696446)
chr6 (53-109)||(29755003-29755059)
chr6 (53-109)||(33308905-33308961)
chr6 (53-109)||(33311174-33311230)
chr6 (1-40)||(4816486-4816525)
chr6 (14-81)||(22490618-22490685)
chr6 (65-107)||(12911770-12911812)
chr6 (10-75)||(17012029-17012095)
chr6 (44-105)||(28038003-28038065)
chr6 (143-192)||(26084818-26084867)
chr6 (45-85)||(11138278-11138318)
chr6 (45-85)||(25466469-25466509)
[»] chr5 (90 HSPs)
chr5 (1-226)||(38881904-38882130)
chr5 (1-226)||(4236429-4236653)
chr5 (1-223)||(16775959-16776182)
chr5 (1-223)||(21947832-21948050)
chr5 (1-161)||(25921728-25921888)
chr5 (1-224)||(20507717-20507940)
chr5 (8-160)||(36402590-36402741)
chr5 (52-194)||(21684767-21684909)
chr5 (1-141)||(2818591-2818731)
chr5 (1-161)||(2174783-2174943)
chr5 (1-160)||(12556178-12556337)
chr5 (13-157)||(31466245-31466389)
chr5 (1-160)||(6756359-6756518)
chr5 (36-157)||(39797956-39798077)
chr5 (1-109)||(31542651-31542759)
chr5 (1-84)||(26098506-26098589)
chr5 (138-217)||(10749572-10749652)
chr5 (138-217)||(10757027-10757107)
chr5 (138-217)||(15354918-15354998)
chr5 (138-217)||(15357194-15357274)
chr5 (1-109)||(31544996-31545104)
chr5 (138-199)||(34477485-34477546)
chr5 (1-84)||(26097674-26097757)
chr5 (1-83)||(40221464-40221546)
chr5 (138-226)||(31179807-31179895)
chr5 (86-226)||(31544857-31544997)
chr5 (99-226)||(31542501-31542628)
chr5 (138-205)||(23664914-23664981)
chr5 (138-205)||(23667189-23667256)
chr5 (138-205)||(23793606-23793673)
chr5 (1-105)||(10586758-10586866)
chr5 (1-83)||(39854426-39854507)
chr5 (153-226)||(659853-659925)
chr5 (1-81)||(17072827-17072907)
chr5 (1-81)||(25904047-25904127)
chr5 (1-109)||(31179626-31179734)
chr5 (10-81)||(36208524-36208596)
chr5 (1-83)||(10529354-10529436)
chr5 (1-83)||(4409999-4410085)
chr5 (1-79)||(18509573-18509652)
chr5 (1-79)||(18511467-18511547)
chr5 (16-84)||(18596588-18596656)
chr5 (1-105)||(18466599-18466708)
chr5 (1-105)||(18468926-18469035)
chr5 (51-106)||(29748260-29748315)
chr5 (9-84)||(41585969-41586044)
chr5 (168-226)||(659772-659829)
chr5 (10-76)||(6661446-6661512)
chr5 (1-83)||(6747246-6747330)
chr5 (1-78)||(10474578-10474655)
chr5 (52-109)||(34477378-34477435)
chr5 (1-130)||(34530921-34531050)
chr5 (1-81)||(20042994-20043074)
chr5 (1-81)||(24126800-24126880)
chr5 (1-81)||(31472868-31472948)
chr5 (3-83)||(37706037-37706117)
chr5 (1-81)||(1189864-1189949)
chr5 (1-105)||(27912449-27912560)
chr5 (1-105)||(25803935-25804049)
chr5 (51-107)||(2144897-2144954)
chr5 (12-81)||(20044954-20045023)
chr5 (1-74)||(21288715-21288788)
chr5 (168-226)||(25921874-25921933)
chr5 (52-109)||(34479739-34479796)
chr5 (1-81)||(695833-695913)
chr5 (168-228)||(2818729-2818789)
chr5 (1-81)||(39398248-39398327)
chr5 (168-226)||(2174739-2174797)
chr5 (52-105)||(15552154-15552208)
chr5 (1-83)||(17818745-17818826)
chr5 (52-105)||(27910364-27910418)
chr5 (168-217)||(38960487-38960537)
chr5 (53-105)||(3373348-3373401)
chr5 (53-109)||(10757180-10757236)
chr5 (53-109)||(15354789-15354845)
chr5 (53-109)||(15357065-15357121)
chr5 (53-109)||(23665054-23665110)
chr5 (53-109)||(23793477-23793533)
chr5 (53-109)||(38960349-38960405)
chr5 (14-108)||(42770690-42770785)
chr5 (187-226)||(18186489-18186528)
chr5 (1-40)||(34477309-34477348)
chr5 (1-40)||(34479674-34479713)
chr5 (168-199)||(34479855-34479886)
chr5 (50-83)||(6745003-6745036)
chr5 (153-226)||(20504320-20504393)
chr5 (187-224)||(36402747-36402784)
chr5 (45-81)||(2723911-2723947)
chr5 (186-226)||(12556342-12556382)
chr5 (53-109)||(23667329-23667385)
[»] chr2 (60 HSPs)
chr2 (1-226)||(21520948-21521175)
chr2 (1-199)||(19504600-19504798)
chr2 (1-226)||(27104574-27104799)
chr2 (1-222)||(42064294-42064515)
chr2 (1-226)||(24162467-24162693)
chr2 (1-226)||(19502266-19502491)
chr2 (1-193)||(13910299-13910491)
chr2 (1-228)||(22407664-22407891)
chr2 (1-226)||(6259070-6259295)
chr2 (1-226)||(40032313-40032527)
chr2 (1-161)||(43623823-43623982)
chr2 (1-174)||(22287591-22287764)
chr2 (1-161)||(6264400-6264560)
chr2 (10-120)||(18800566-18800676)
chr2 (45-191)||(35107110-35107256)
chr2 (138-217)||(36559211-36559291)
chr2 (1-105)||(42452678-42452783)
chr2 (1-81)||(31733020-31733100)
chr2 (168-228)||(43623968-43624028)
chr2 (1-104)||(28196534-28196637)
chr2 (147-217)||(36561539-36561610)
chr2 (10-85)||(37963191-37963266)
chr2 (1-84)||(42923764-42923849)
chr2 (10-133)||(12342673-12342797)
chr2 (1-81)||(19007560-19007640)
chr2 (1-81)||(22163202-22163282)
chr2 (51-111)||(28462591-28462651)
chr2 (138-217)||(45332528-45332608)
chr2 (53-130)||(45156922-45156999)
chr2 (10-83)||(45280249-45280322)
chr2 (10-123)||(11578368-11578483)
chr2 (1-80)||(15539730-15539809)
chr2 (10-81)||(17849037-17849108)
chr2 (1-105)||(23452492-23452601)
chr2 (1-80)||(38020064-38020143)
chr2 (168-226)||(6264546-6264604)
chr2 (51-117)||(35028463-35028529)
chr2 (1-78)||(3022086-3022163)
chr2 (10-83)||(22874060-22874133)
chr2 (1-81)||(11739815-11739895)
chr2 (138-182)||(36561488-36561532)
chr2 (45-107)||(40699203-40699266)
chr2 (15-81)||(14837193-14837259)
chr2 (51-85)||(17897547-17897581)
chr2 (52-105)||(35215902-35215956)
chr2 (51-186)||(37171049-37171183)
chr2 (45-85)||(20146906-20146946)
chr2 (51-106)||(20589555-20589611)
chr2 (55-107)||(33603818-33603870)
chr2 (1-73)||(34979834-34979906)
chr2 (53-109)||(36559082-36559138)
chr2 (53-109)||(36561359-36561415)
chr2 (168-223)||(18800702-18800757)
chr2 (45-80)||(20147047-20147082)
chr2 (147-182)||(36561518-36561553)
chr2 (1-40)||(38020163-38020202)
chr2 (55-84)||(35218286-35218315)
chr2 (53-82)||(45332399-45332428)
chr2 (63-107)||(13828657-13828701)
chr2 (1-104)||(17848342-17848443)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-222)||(14831-15052)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-226)||(69546-69774)
scaffold0025 (1-158)||(73278-73438)
scaffold0025 (181-226)||(73440-73485)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-159)||(3872-4030)
[»] scaffold0068 (1 HSPs)
scaffold0068 (52-194)||(29001-29143)
[»] scaffold0140 (4 HSPs)
scaffold0140 (138-217)||(21982-22062)
scaffold0140 (138-217)||(24257-24337)
scaffold0140 (53-109)||(22135-22191)
scaffold0140 (53-109)||(24410-24466)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-83)||(1086-1168)
[»] scaffold0127 (1 HSPs)
scaffold0127 (138-226)||(12907-12995)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-84)||(11728-11811)
[»] scaffold0224 (1 HSPs)
scaffold0224 (10-107)||(16082-16180)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-83)||(41738-41820)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-84)||(51959-52044)
scaffold0005 (1-83)||(183895-183976)
[»] scaffold0472 (2 HSPs)
scaffold0472 (1-109)||(6124-6232)
scaffold0472 (138-199)||(6013-6074)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-84)||(79135-79218)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-104)||(79789-79892)
[»] scaffold0468 (1 HSPs)
scaffold0468 (10-72)||(1895-1958)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-101)||(1968-2075)
[»] scaffold0133 (1 HSPs)
scaffold0133 (23-75)||(4773-4825)
[»] scaffold0057 (1 HSPs)
scaffold0057 (14-85)||(16914-16986)
[»] scaffold0045 (1 HSPs)
scaffold0045 (32-104)||(85161-85233)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 117)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10956280 - 10956510
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  10956280 ttgttgccattctaaacccttgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaa 10956379  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10956380 caaatctgcacctaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 10956479  T
Q  201 caaaactgaaacctccaatcgtgccatgatg 231  Q
    |||||||||||||||||||||||||||||||    
T  10956480 caaaactgaaacctccaatcgtgccatgatg 10956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18099423 - 18099648
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  18099423 ttgttgccattctaaacccttgtttcagccccctctatctctcaagtttactctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttgga 18099521  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||| |||||||||| | | || ||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  18099522 acaaatctgcacccaaaaatacgtttctattgttcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttgcc 18099621  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
     ||||||||||||||||||||||||||    
T  18099622 tcaaaactgaaacctccaatcgtgcca 18099648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 10958576 - 10958776
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  10958576 ttgttgccattctaaacccttgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaa 10958675  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||||||||||||||||||||| | ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||    
T  10958676 caaatctgcacctaaaaatacgtttctgttattggctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtctttccc 10958775  T
Q  201 c 201  Q
    |    
T  10958776 c 10958776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 22114561 - 22114783
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaa 103  Q
    ||||| ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22114561 ttgcctttctaaacccttgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaa 22114660  T
Q  104 atctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc-cca 202  Q
    ||||||||| |||||||||| | |||||||||  |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |    
T  22114661 atctgcacccaaaaatacgtttctgttattcgccgccatcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaa 22114760  T
Q  203 aaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||    
T  22114761 aaactgaaacctcc-atcgtgcca 22114783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 5522868 - 5523095
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  5522868 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaa 5522967  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||     
T  5522968 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttgcct 5523067  T
Q  201 caaaactgaaacctccaatcgtgccatg 228  Q
    ||||||||||||| ||||||||||||||    
T  5523068 caaaactgaaaccaccaatcgtgccatg 5523095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 5191657 - 5191427
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||  ||||||||||||||||||||||||||||| || ||||||||||||||    
T  5191657 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaa 5191558  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||| |||||||     
T  5191557 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttgcct 5191458  T
Q  201 caaaactgaaacctccaatcgtgccatgatg 231  Q
    |||||||||||||||||||||||||| ||||    
T  5191457 caaaactgaaacctccaatcgtgccacgatg 5191427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 26720552 - 26720327
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||| |||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26720552 ttgttgcctttctaaacccttatttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaa 26720453  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||     
T  26720452 caaatctgcactaaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcct 26720353  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  |||||||||||||| |||||    
T  26720352 caaacttgaaacctccaatcctgcca 26720327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 1321441 - 1321220
Alignment:
Q  5 tgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    |||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 1321342  T
Q  105 tctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaa 204  Q
    |||||||  ||||||| || | |||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  1321341 tctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcctcaaa 1321242  T
Q  205 actgaaacctccaatcgtgcca 226  Q
      ||||||||| ||||||||||    
T  1321241 cttgaaacctctaatcgtgcca 1321220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3859532 - 3859350
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  3859532 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaa 3859433  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatt 183  Q
    |||||||||||| |||||||||| ||| |||||||  |||||||||||||| |||||||||| ||||||||||||||||||||    
T  3859432 caaatctgcacccaaaaatacgtttatattattcgccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32264292 - 32264522
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtt----tactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||| |||||||||||||||| |||||| |||||||  | |||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32264292 ttgttgcctttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 32264391  T
Q  97 ggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 196  Q
    | |||||||||||||| ||||||| || | ||||||||| ||||||||||||||| ||||||| ||| | |||||||||||||||    ||||||| |||    
T  32264392 gaaacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgactt 32264491  T
Q  197 gcc-ccaaaactgaaacctccaatcgtgcca 226  Q
    ||| | |||||||||||||||||||||||||    
T  32264492 gcctcaaaaactgaaacctccaatcgtgcca 32264522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 45882943 - 45882752
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |    
T  45882943 ttgttgcctttctaaacccttgtttcagccccctctatct-catagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttca 45882845  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtg 192  Q
    ||||||||||||| ||||||| || | |||||||||||| |||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||    
T  45882844 acaaatctgcacccaaaaataggtttctgttattcgttgtcagcgcaccatcgtgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18097153 - 18097363
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| |    
T  18097153 ttgttgccattctaaacccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaa 18097252  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||| |||||||||| | |||||||||                | ||||| |||||||||||||||||||||||||||||  |||||||||    
T  18097253 acaaatctgcacccaaaaatacgtttctgttattcg----------------ccgccactatgcgaccccatcgtgccacgatttttcctatgccttgcc 18097336  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
     ||||||||||||||||||||||||||    
T  18097337 tcaaaactgaaacctccaatcgtgcca 18097363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18162667 - 18162508
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactc-tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| |||||||||||||||||| |||  ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18162667 ttgttgcctttctaaacccttgtttcatccc--tctatctccaagtttactcatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 18162570  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||||||||||| |||||||||| | ||||||||| ||||||||||||||| || ||||||    
T  18162569 acaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcgtggcacgat 18162508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 11163154 - 11162997
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  11163154 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaa 11163055  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccac 158  Q
    |||||||||||| |||||||||| | |||||||||  |||||||||||||| ||||||    
T  11163054 caaatctgcacccaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccac 11162997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15780864 - 15780747
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15780864 ttgttgccattctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 15780765  T
Q  101 caaatctgcacctaaaaa 118  Q
    |||||||||||| |||||    
T  15780764 caaatctgcacccaaaaa 15780747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 24177274 - 24177058
Alignment:
Q  11 tctaaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||| ||||||| ||||||| |||| ||  ||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  24177274 tctaaactcttgttttcagccccctctagctcaatgtttactatgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgc 24177175  T
Q  110 acctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactga 209  Q
    || ||||||||||| |||||| ||||   ||| ||||||||| ||||||  ||||| |||||||||||||  ||||||||||| |||||  || ||||||    
T  24177174 acttaaaaatacgtttatgtttttcgcctccaacgcaccatcgtgccacattgcgatcccatcgtgccacattttttccagtgacttgcttcagaactga 24177075  T
Q  210 aacctccaatcgtgcca 226  Q
    |||  ||||||||||||    
T  24177074 aacaaccaatcgtgcca 24177058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11170408 - 11170248
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11170408 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 11170309  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||| ||||||| || | |||||||||  |||||||||| |||  ||||||||    
T  11170308 caaatctgcacccaaaaatatgtttctgttattcgccgccagcgcacaatcgagccacgat 11170248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 48361924 - 48362082
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| ||||||||||| ||||||||||||| | |||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48361924 ttgttgtcattctaaacc-ttgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 48362022  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||||| | |||||||||| | || |||||| ||||||||||||||| ||||||||    
T  48362023 caaatctgcatccaaaaatacgtttctgctattcgctgccagcgcaccatcatgccacga 48362082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 24979711 - 24979552
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||||||||||||||| |||||||  | ||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||    
T  24979711 ttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaa 24979612  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||||||| ||||||| || ||||||||||| | |||||| |||||| ||||||||    
T  24979611 caaatctgcaccaaaaaatatgtttatgttattcgctaccagcgtaccatcgtgccacga 24979552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 32219099 - 32218941
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||| |||||||||||||||||| |||||||  | ||||| || ||||||||||||||||||||| | |||||||  ||||||||||||||    
T  32219099 ttgttgcctttctgaacccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttatactgaaagtattacttaaaatttggaa 32219000  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacg 159  Q
    |||||||||||| |||||||||| | | ||||||| ||||||||||||||| |||||||    
T  32218999 caaatctgcacccaaaaatacgtttctcttattcgctgccagcgcaccatcgtgccacg 32218941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 10084645 - 10084807
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    ||||| ||||||||||||||| ||||||| |||||||   |||  |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  10084645 ttgcctttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttgga 10084744  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatg 162  Q
    ||||||||||||  ||||||| || | |||| |||| ||||||||||||||| ||||||||||    
T  10084745 acaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatg 10084807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12268219 - 12268348
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | |||||||| ||||||||||| || |||||||  | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12268219 ttgttgtctttctaaactcttgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaa 12268318  T
Q  101 caaatctgcacctaaaaatacgtctatgtt 130  Q
    ||||| |||||  |||||||||||| ||||    
T  12268319 caaatttgcactgaaaaatacgtctctgtt 12268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 10191565 - 10191727
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    ||||| ||||||||||||||| ||||||| | |||||   |||  |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10191565 ttgcctttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 10191664  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatg 162  Q
    |||||| |||||  ||||||| || | |||| |||| ||||||||||||||| ||||||||||    
T  10191665 acaaatttgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatg 10191727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35777425 - 35777266
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  ||||||||||||||||||||||| |||||||  | |||| || |||||||| ||||||||||||||||||||| | ||||||||| || ||    
T  35777425 ttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaa 35777326  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||| ||||||| || |||||| || | ||||||||||||||| |||||||||    
T  35777325 caaatctgcacccaaaaatatgtttatgtt-tttgctgccagcgcaccatcgtgccacgat 35777266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53915749 - 53915832
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||| ||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  53915749 ttgttgtcatcctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtat 53915832  T

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Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6063699 - 6063809
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||  |||| || |||||||||||||||||||||||||||||| | ||||||||| ||     
T  6063699 ttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgt 6063798  T
Q  99 aacaaatctgc 109  Q
    |||||||||||    
T  6063799 aacaaatctgc 6063809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 25388745 - 25388656
Alignment:
Q  137 tgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  25388745 tgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 25388656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 5899657 - 5899545
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    ||||||||| || |||||||||| ||| |||||||||| | | || ||   ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  5899657 gcttaaaatctgtaacaaatctgtacccaaaaatacgttt-tatttttatctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttt 5899559  T
Q  186 tccagtgccttgcc 199  Q
    ||||||||||||||    
T  5899558 tccagtgccttgcc 5899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6066049 - 6066170
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct-tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| |||||||||||||||||||||||  |||||||  | |||| || ||||||||||||||||||||||||||||||   ||||||||| || |    
T  6066049 ttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgta 6066148  T
Q  100 acaaatctgcacctaaaaatac 121  Q
    |||||||||| || ||||||||    
T  6066149 acaaatctgctcccaaaaatac 6066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38890044 - 38889935
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||| ||   |||||||||||||||||||||||||||| |||||||||||||    
T  38890044 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgct---atacaaggtctatatttatagtaaaagtttcgcttaaaattt 38889948  T
Q  97 ggaacaaatctgc 109  Q
    |||||||||||||    
T  38889947 ggaacaaatctgc 38889935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51943375 - 51943292
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||| ||||||||| |||||||||| || ||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  51943375 ttgttgcctttctaaacctttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagtat 51943292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4308534 - 4308616
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  4308534 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 4308616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6561814 - 6561740
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatag 75  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||    
T  6561814 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 10192401 - 10192470
Alignment:
Q  156 cacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgcca 10192470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43226090 - 43226008
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||| ||||||||||||||| ||||||    
T  43226090 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagta 43226008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 5886182 - 5886070
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    ||||||||| || ||||||| |||||| |||||||||| | | || ||   ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  5886182 gcttaaaatctgtaacaaatttgcacccaaaaatacgttt-tatttttatctgccagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatttt 5886084  T
Q  186 tccagtgccttgcc 199  Q
    |||||| |||||||    
T  5886083 tccagtaccttgcc 5886070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 38210214 - 38210126
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  38210214 gccagcgcactatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 38210126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 50493823 - 50493735
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  50493823 gccagcgcaccatcgtgccacgatgagactccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 50493735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1626936 - 1627016
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  1626936 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 1627016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 53468708 - 53468788
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||||||||||||||||||||||||| | |||||  | |||||| ||||||||| ||||||||||||||||||||    
T  53468708 ttgttgccattctaaacccttgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaag 53468788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1313413 - 1313331
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||| |||||| ||||||||||||| |||||||  | |||||||||||| |||||||||||||||||||||||||||    
T  1313413 ttgttgccattgtaaacc-ttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaagtat 1313331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28761681 - 28761784
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | |||||||||||||||||| |||| |||||||  | |||||||||||| ||| |||||||||||||||||||||||| || | || ||||||    
T  28761681 ttgttgtctttctaaacccttgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatccctcataaattggaa 28761780  T
Q  101 caaa 104  Q
    ||||    
T  28761781 caaa 28761784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 43421668 - 43421747
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| |||||||||||||||||| ||||||||||||  | |||||| ||||||||| |||||||||||||||||||    
T  43421668 ttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaa 43421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 10085481 - 10085550
Alignment:
Q  156 cacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  10085481 cacgatgtgatcccatcgtgccacgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgcca 10085550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43228295 - 43228213
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||| |||||||||||||| ||||||| || |||| ||||||||||| ||||||||||||||| ||||||    
T  43228295 ttgttgcctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagta 43228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 51727259 - 51727341
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| | |||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  51727259 ttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 51727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 6063866 - 6063939
Alignment:
Q  145 caccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||    
T  6063866 caccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctcca 6063939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50494003 - 50493895
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||  ||||||||||||||||||||||| ||||||| ||| |||| || |||||||||||||||||||||||| |||||   ||||||||| || |    
T  50494003 ttgttgcttttctaaacccttgtttcagccccctctatctctca-gtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgta 50493905  T
Q  100 acaaatctgc 109  Q
    ||||||||||    
T  50493904 acaaatctgc 50493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 880705 - 880785
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||| |||||||||| ||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  880705 ttgttgccattctaaactcttgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28137548 - 28137628
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||| |  |||||||||||||||||    
T  28137548 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaag 28137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47701848 - 47701928
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| | |||||  | |||||| ||||||||| ||||||||||||||||||||    
T  47701848 ttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaag 47701928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 53597232 - 53597161
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||||||||||| ||||| ||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  53597232 taaacccttgtttcatcccct-ctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatc 53597161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 455911 - 455802
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatg-tttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   ||| | ||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  455911 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 455812  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  455811 tggaacaaat 455802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 458288 - 458179
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatg-tttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   ||| | ||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  458288 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 458189  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  458188 tggaacaaat 458179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4104148 - 4104257
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  4104148 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 4104247  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  4104248 tggaacaaat 4104257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 53896613 - 53896695
Alignment:
Q  144 gcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||  |||||| |||||||| |||||||||    
T  53896613 gcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtaccttgcccaaaaaactaaaacctcc-atcgtgcca 53896695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53917917 - 53918000
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||| ||||||||||||| || ||||  | ||||| |||||| |||||||||||||||||||||||||||    
T  53917917 ttgttgtcattctaaaccattgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaagtat 53918000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 13893345 - 13893287
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac 111  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  13893345 tgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 13893287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 23633455 - 23633357
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    ||||||| |||||||| |||||  |||||||  | |||||||||||||||| |||||||||||||||||||||||| || | ||| |||||||||||||    
T  23633455 ttctaaatccttgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 23633357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 35918202 - 35918284
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| |||||||  |  ||| || |||||||||||||||||||||||| ||||||    
T  35918202 ttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaagta 35918284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 890024 - 890104
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||||||||||||||||||||||  | |||||||  | |||||| |||||||||  |||||||||||||||||||    
T  890024 ttgttgccattctaaacccttgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 890104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 6719408 - 6719472
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  6719408 gtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 27635887 - 27635959
Alignment:
Q  8 cattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||| || |||||||||||||| ||||||||    
T  27635887 cattctaaacccttgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtagtaaaa 27635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43423716 - 43423796
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| ||| |||  | ||||||  |||||||| ||||||||||||||||||||    
T  43423716 ttgttgcctttctaaacccttgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaag 43423796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 5886240 - 5886181
Alignment:
Q  50 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  5886240 ctctgataaaaggtctatatttatagtaaaagtttcgcttaaaatctgtaacaaatctgc 5886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 5899715 - 5899656
Alignment:
Q  50 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  5899715 ctctgataaaaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 5899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 46966938 - 46966997
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca 110  Q
    |||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||||    
T  46966938 tctgatacaatgtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgca 46966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51675008 - 51675087
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||| | ||||||||||||||||||||||| |||||||  | ||||||  |||||||| |||||||||||||||||||    
T  51675008 ttgttgtctttctaaacccttgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 3306794 - 3306724
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    ||||||||||||||||||||||| | |||||  | |||||| ||||||||| |||||||||||||||||||    
T  3306794 ttctaaacccttgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 25388851 - 25388794
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  25388851 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 25388794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3314688 - 3314608
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||| || |||||||||||| |||||||||| |||||||  | |||||| |||||||||  |||||||||||||||||||    
T  3314688 ttgttacctttctaaacccttatttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 3314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5927017 - 5927097
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||  ||||||||||||||||||||||  |||||||  | |||||| | ||||||| ||||||||||||||||||||    
T  5927017 ttgttgcatttctaaacccttgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaag 5927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28100294 - 28100374
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||  ||||||||||||||||||||||| |||||||  | | |||||||||||||| |  |||||||||||||||||    
T  28100294 ttgttgcttttctaaacccttgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaag 28100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28102255 - 28102335
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | | ||||||| |||||| |  |||||||||||||||||    
T  28102255 ttgttgcctttctaaacccttgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaag 28102335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 746761 - 746650
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-----tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||  ||||||||||||||||||||||| |||||||     |||  |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  746761 ttgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 746662  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  746661 tttggaacaaat 746650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6231453 - 6231374
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||| ||||||||||||||  |||||||  |  ||||| ||||||||| |||||||||||||||||||    
T  6231453 ttgttgcctttctaaatccttgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 38889936 - 38889861
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||||||| || |||||||||||||| ||||||| || | |||||||||  |||||||||||||| |||||||||    
T  38889936 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 38889861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 6719532 - 6719597
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaac--ctccaatcgtgccatgatg 231  Q
    |||||||||||||||||||||||||| |||||  |||||||||||  |||||||||||||| ||||    
T  6719532 ccatcgtgccacgatttttccagtgcattgcctaaaaactgaaacctctccaatcgtgccacgatg 6719597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25533446 - 25533355
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-------tcat-gtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||| ||||||||||||||||||||||| |||||||       |||  |||||  |||||||||||||||||||||||||||||||||    
T  25533446 ttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 25533355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27101434 - 27101520
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgt----ttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||| | |||||||  || |    || ||||||||||||||||||||||||||| ||||||    
T  27101434 ttgttgcctttctaaacccttgtttcagcctcctctatctctatctcaatttgctctgatacaaggtctatatttatagtgaaagta 27101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 31151344 - 31151271
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||||||||| ||||||| |||||||  | |||||| |||||||||| ||||||||||||||||||||    
T  31151344 ttctaaacccttgttttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaag 31151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 39715472 - 39715392
Alignment:
Q  2 tgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||  ||||||||||| ||||||||||| ||||||  | |||||| ||||||||| |||||||||||||| |||||||    
T  39715472 tgttgcctctctaaacccttatttcagcccct-ctatctcaaggtttacactgatacaatgtctatatttatagcaaaagta 39715392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 4560530 - 4560602
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||| ||||||||||||| |||||||  ||||||||| |||||||  ||||||| ||||||| ||||||||    
T  4560530 taaaccattgtttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagtatc 4560602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 26762919 - 26762863
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||| ||||||||||||||||| ||| || |||| |||||||||||||    
T  26762919 tctgatacaaggtttatatttatagtaaaagcatccctaaaaaattggaacaaatct 26762863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36011831 - 36011751
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||| ||||||||||||||| | |||||  | |||||| || |||||| ||||||||||||||||||||    
T  36011831 ttgttgtctttctaaatccttgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaag 36011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 38210321 - 38210265
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 108  Q
    ||||||||||| ||||||||||||||||||| | ||||||||| || ||||||||||    
T  38210321 ctgatacaaggcctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctg 38210265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47149148 - 47149233
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttc----atgtttac-tctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| ||||||| |    | |  ||| |||||||||||||||||||||||||||||||    
T  47149148 ttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagtaaaag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 53591199 - 53591119
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | |||||||| |||||||||||| | |||||||  | |||||| || |||||| ||||||||||||||||||||    
T  53591199 ttgttgtctttctaaactcttgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54691827 - 54691906
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||| ||| ||||||| |||||||| | ||||| ||||||| | |||||||||||||||| | ||||||||||||||||||    
T  54691827 ttgtcgcctttctaaaaccttgttttaccccct-ctatcttaaggtttactctgatacaaagcctatatttatagtaaaag 54691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 6719471 - 6719546
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||||||| || | |||||||||||| ||||||| || | |||||||||  |||||||||||||| |||||||||    
T  6719471 gcttaaaatctgtatcaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 6719546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 11163008 - 11162950
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||||||    
T  11163008 ccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgcca 11162950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 23637022 - 23636947
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||||| |||| | |||||||  | |||||||||||||||| || |||||||||| ||||| ||||    
T  23637022 ttctaaacccttgttttagcctcctctatctcaaggtttactctgatacaaagtatatatttatattaaaattatc 23636947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 35777280 - 35777222
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  35777280 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 35777222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 6484373 - 6484307
Alignment:
Q  17 cccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||||||||||| |||||||  | |||||| ||||||||| | |||||||||||| |||||||    
T  6484373 cccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaagta 6484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 10621846 - 10621900
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  10621846 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 10621900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 28181006 - 28180948
Alignment:
Q  23 tttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  28181006 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 28180948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 53896475 - 53896557
Alignment:
Q  27 agccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||| |||||||  | |||| || |||||||||||||||||||||||| |||||   ||||||||| || |||||||||||    
T  53896475 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 53896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 1618917 - 1619018
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatct-tcatg-tttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||| ||||||| ||| ||| ||| | |||||| || ||||||||||||||||||||| |||||||| || | ||| |||||||||||    
T  1618917 ttctaaacccttgttttcagccccctctgtctctcaaggtttactatggtacaaggtctatatttatagtcaaagtatccctcataaaattggaacaaat 1619016  T
Q  106 ct 107  Q
    ||    
T  1619017 ct 1619018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 42990234 - 42990181
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    ||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  42990234 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 42990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 4663879 - 4663843
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||||||||| ||||||||||||||||||||    
T  4663879 gtttactctgatacaatgtctatatttatagtaaaag 4663843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 562060 - 562123
Alignment:
Q  46 tttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 108  Q
    |||||||| |||||| ||||||||||||||||||| |||| |||| |||  |||||||||||||    
T  562060 tttactctaatacaaagtctatatttatagtaaaattatcccttataaaaatggaacaaatctg 562123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 6066195 - 6066253
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||| |||||||||||||||||  |||||| |||||||| |||||||||    
T  6066195 ccatcgtgccacgatgtttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 6066253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 16996760 - 16996705
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 106  Q
    ||||||||||||| |||||||||| |||||  ||| || |||||||||||||||||    
T  16996760 tctgatacaaggtttatatttatattaaaaccatccctaaaaatttggaacaaatc 16996705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30005845 - 30005806
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  30005845 ttgttgcctttctaaacccttgtttcagccccctctatct 30005806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 38889875 - 38889817
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||||||||||| |||||||||   ||||||||||||||| |||||||||    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctcc-atcgtgcca 38889817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42990308 - 42990269
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  42990308 ttgttgcctttctaaacccttgtttcagccccctctatct 42990269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 47883178 - 47883260
Alignment:
Q  51 tctgatacaaggtctatatttatagt-aaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttatt 133  Q
    ||||||||||||  ||||||||||||  |||||| | |||||||| |||||||||||| || || ||||||||| |||||||||    
T  47883178 tctgatacaaggcttatatttatagtggaaagtaacccttaaaatatggaacaaatcttca-ctgaaaatacgtttatgttatt 47883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 13419830 - 13419796
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||| |||||||||||||||||||||||||||    
T  13419830 tctgatataaggtctatatttatagtaaaagtatc 13419796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 25690653 - 25690691
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  25690653 gtttgctctgatacaaggtctatatttatagtgaaagta 25690691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 41849095 - 41849041
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    ||||||||| |||||||||||||||||||||||  || | |||||||||||||||    
T  41849095 ctgatacaatgtctatatttatagtaaaagtataactcataaatttggaacaaat 41849041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 11007978 - 11008011
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||| ||||||||||||||||||||    
T  11007978 tctgatacaaggtttatatttatagtaaaagtat 11008011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 27101562 - 27101595
Alignment:
Q  50 ctctgatacaaggtctatatttatagtaaaagta 83  Q
    ||||||||||||||||||||||||||| ||||||    
T  27101562 ctctgatacaaggtctatatttatagtgaaagta 27101595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 1673927 - 1673895
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||||| |||||||||||||||||||||||    
T  1673927 tgatacaagttctatatttatagtaaaagtatc 1673895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 7768530 - 7768474
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||  ||||||||||||||||  ||| || |||| |||||||||||||    
T  7768530 tctgatacaaggcttatatttatagtaaaaacatccctaaaaaattggaacaaatct 7768474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 11170255 - 11170204
Alignment:
Q  175 gccacgatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||    
T  11170255 gccacgatttttccagtgccttgcctcaaaaaccgaaacctcc-atcgtgcca 11170204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 13420437 - 13420509
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||||||| | | |||||  | |||| || ||||||||   ||||||||||||||||||||||    
T  13420437 taaacccttgtttcagcctcctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagtatc 13420509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 25635374 - 25635318
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatc 106  Q
    |||||||||| |||||||||||||||||||| ||| || | ||| ||||||||||||    
T  25635374 tctgatacaaagtctatatttatagtaaaagcatccctcataaaattggaacaaatc 25635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22802989 - 22803213
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22802989 ttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 22803088  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| || ||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||     
T  22803089 caaatctgca-ctcaaaatacgtttttgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctttcct 22803187  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  22803188 caaaactgaaacctccaatcgtgcca 22803213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36919840 - 36920067
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||||||||||||| | ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36919840 ttgttgcctttctaaacccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 36919939  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||||||||||| |||||||||| | |  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  36919940 aacaaatctgcacccaaaaatacgtttctactattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttgc 36920039  T
Q  199 cccaaaactgaaacctccaatcgtgcca 226  Q
    | ||||| ||||||||||||||||||||    
T  36920040 ctcaaaattgaaacctccaatcgtgcca 36920067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31849854 - 31850079
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| |  |||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  31849854 ttgttgcctttctaaacccttgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaa 31849953  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  31849954 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgccc 31850053  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  31850054 caaaactgaaacctccaatcgtgcca 31850079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 48486397 - 48486172
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48486397 ttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 48486298  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | ||||||||| ||||||||||||||  ||||||  || ||||||||||||||||||    ||||||| ||||||     
T  48486297 caaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgcct 48486198  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  48486197 caaaactgaaacctccaatcgtgcca 48486172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 51015324 - 51015099
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51015324 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaa 51015225  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc- 199  Q
    |||||||||||  ||||||| || | ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||     
T  51015224 caaatctgcactgaaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcct 51015125  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
      ||||||||||||||| |||||||||    
T  51015124 aaaaaactgaaacctcc-atcgtgcca 51015099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24888874 - 24888649
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24888874 ttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaa 24888775  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||     
T  24888774 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcct 24888675  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||||||||||    
T  24888674 caaacttgaaacctccaatcgtgcca 24888649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 36921749 - 36921977
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| |||||| ||||||||||| ||||| |||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36921749 ttgttgcctttctaagcccttgtttcaccccct-ctatctctcaaagtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttgg 36921847  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||||||||| | |||||||||| | ||||||||| |||||  |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  36921848 aacaaatctgcatccaaaaatacgtttctgttattcgctgccaatgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttgc 36921947  T
Q  199 cccaaaactgaaacctccaatcgtgccatg 228  Q
    | ||||||||||||||||||||||||||||    
T  36921948 ctcaaaactgaaacctccaatcgtgccatg 36921977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 37089626 - 37089823
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttg 97  Q
    |||||||||||||||||||||||||||||||| |||||||   ||| |||||  ||||||||||||||||||||||||||||||| | ||||||||||||    
T  37089626 ttgttgccattctaaacccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttg 37089725  T
Q  98 gaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcct 195  Q
    |||||||||||||||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37089726 gaacaaatctgcacctaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcct 37089823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5198498 - 5198273
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5198498 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 5198399  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||| || |||||     
T  5198398 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgcct 5198299  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||| ||||||||||||||    
T  5198298 caaacttgaaatctccaatcgtgcca 5198273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 3824875 - 3825055
Alignment:
Q  48 tactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcac 147  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | |||||||||| |||| |||||    
T  3824875 tactctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcac 3824974  T
Q  148 catcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgccatg 228  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  3824975 catcgtgccacgatgcgaccccattgtgccatgatttttccagtgctttgcctcaaaactgaaacctccaatcgtgccatg 3825055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22044645 - 22044848
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22044645 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaa 22044744  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| ||||||||| || | |||| |||  ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||     
T  22044745 caaatctgca-ctaaaaatatgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcct 22044843  T
Q  201 caaaa 205  Q
    |||||    
T  22044844 caaaa 22044848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24879067 - 24878842
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||| ||||||||||| ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24879067 ttgttgtctttctaaaccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 24878968  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||| |||||| |||||||||| | ||||||||| |||||||| |||||| ||||||| ||| | |||||||||||||||    ||||||| |||||      
T  24878967 caaatatgcacccaaaaatacgtttctgttattcgatgccagcgtaccatcgtgccacgttgcaatcccatcgtgccacgaaaaatccagtgacttgcgt 24878868  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  24878867 caaaactgaaacctccaatcgtgcca 24878842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24880529 - 24880304
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||| ||||  ||||| ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24880529 ttgttgcctttctaaaccctagtttacgccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 24880430  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| | |||||||||| | ||||||||| ||||||||||||||| ||||||| ||| | ||||||||||| |||    ||||||| ||||||     
T  24880429 caaatctgcatccaaaaatacgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaatcccatcgtgccgcgaaaaatccagtgacttgcct 24880330  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||| ||||||||    
T  24880329 caaaactgaaacctccattcgtgcca 24880304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 38409283 - 38409047
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcat------gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaat 94  Q
    |||||||| || |||||| ||||||||||||| ||||||| | |      |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38409283 ttgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaat 38409184  T
Q  95 ttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcc 194  Q
    |||||||||||||||||  ||||||| || | |||| ||||  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  38409183 ttggaacaaatctgcactcaaaaatatgtttctgtttttcgccgccaacgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgct 38409084  T
Q  195 ttgccccaaaactgaaacctccaatcgtgccatgatg 231  Q
    ||||| ||||  |||||||||||||||||||| ||||    
T  38409083 ttgcctcaaacttgaaacctccaatcgtgccacgatg 38409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5637720 - 5637947
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||| |||||||| |||||||||||||| |||||||   |||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  5637720 ttgttgcctttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaattt 5637819  T
Q  97 ggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 196  Q
    |||||||||||||||| |||| ||||| | |||| |||| ||||||| ||||||| ||||||||||||| ||||||||| || |||||||||||||||||    
T  5637820 ggaacaaatctgcacccaaaa-tacgtttctgtttttcgctgccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgcctt 5637918  T
Q  197 gccccaaaactgaaacctccaatcgtgcca 226  Q
    ||| |||||||||||||||| |||||||||    
T  5637919 gcctcaaaactgaaacctcc-atcgtgcca 5637947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 40091670 - 40091895
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||||||||||||||| |||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40091670 ttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 40091769  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||| |||||  |||||||||| || |||||||| || ||| |||||||| || |||| |||||||||||| || ||||||||||||| || ||| |      
T  40091770 caaatatgcactgaaaaatacgtttacgttattcgctgtcagtgcaccatcgtgtcacgttgcgaccccatcatggcacgatttttccaatggcttactt 40091869  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||| ||||||||||||||    
T  40091870 caaaactgaaatctccaatcgtgcca 40091895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 22046940 - 22047135
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  22046940 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaa 22047039  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||||||| ||||||||| || | |||| |||  ||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  22047040 caaatctgca-ctaaaaatatgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 9174401 - 9174599
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  ||||||||||||||||||||||| ||||||| || |||| || |||||||||||||||||||||||||||||| | ||||||||  || ||    
T  9174401 ttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaa 9174500  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||| ||||||| || | |||| |||  ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  9174501 caaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcc 9174599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 619714 - 619927
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacc 112  Q
    |||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||    
T  619714 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctacc 619813  T
Q  113 taaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaac 212  Q
     ||||||| || | |||||||||  |||||||||||||  ||||||| |||||||||||||||||||||    |||| || |||||| ||||||||||||    
T  619814 caaaaatatgtttctgttattcgccgccagcgcaccattgtgccacgttgcgaccccatcgtgccacgaaaaatccaatgacttgcctcaaaactgaaac 619913  T
Q  213 ctccaatcgtgcca 226  Q
     |||||| ||||||    
T  619914 atccaattgtgcca 619927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 47274805 - 47274647
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  47274805 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaa 47274706  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacg 159  Q
    |||||||||||| |||||||||| ||||||||||| ||||| ||||||||| |||||||    
T  47274705 caaatctgcacccaaaaatacgtttatgttattcgctgccatcgcaccatcgtgccacg 47274647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 11006492 - 11006694
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtt----tactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||| ||||||||||||||||||||||| |||||||   | |     || |||||||||||||||||||||||||||||||| | ||||||||| |    
T  11006492 ttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagtctgatacaaggtctatatttatagtaaaagtcttgcttaaaatct 11006591  T
Q  97 ggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 196  Q
    | |||||||||||||| ||||||| || | |||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11006592 gtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 11006691  T
Q  197 gcc 199  Q
    |||    
T  11006692 gcc 11006694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11435033 - 11434873
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11435033 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 11434934  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||||||    
T  11434933 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 11434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9148331 - 9148113
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||| ||||||||| ||||||| |||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9148331 ttgttgcctttctaaacccttgcttcagccccctctatctctcaaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttgg 9148232  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    ||||||||||||||  ||||||||| | ||||||| | ||        ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  9148231 aacaaatctgcacc-caaaatacgtttctgttatttgctg--------ccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttgc 9148141  T
Q  199 cccaaaactgaaacctccaatcgtgcca 226  Q
    | ||||  ||||||||||||||| ||||    
T  9148140 ctcaaacttgaaacctccaatcgcgcca 9148113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22801117 - 22801276
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| ||||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22801117 ttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaa 22801216  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||| || ||||||||| | ||||||| | |||| |||||||||| |||||||||    
T  22801217 caaatctgca-ctcaaaatacgtttctgttatttgctgccggcgcaccatcgtgccacgat 22801276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 52942701 - 52942881
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgata--caaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| |||||||||||||||||||||||| ||||||  | ||||| |||||||  ||||||||||||||||||| |||||||  ||||||||||||    
T  52942701 ttgttgcctttctaaacccttgtttcagcccct-ctatctcaaagtttagtctgatatacaaggtctatatttatagtgaaagtattacttaaaatttgg 52942799  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacg 180  Q
    |||||||||||||| ||||||| || ||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||    
T  52942800 aacaaatctgcaccaaaaaatatgtttatgttattcgctgccagcgcatcatcgtgccacgttgtgaccccatcgtgccacg 52942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 7941399 - 7941240
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatctt--catgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||||||||||||| |||||||   |  |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7941399 ttgttgcctttctaaacccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttgg 7941300  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccac 158  Q
    |||||||||||||| |||||||||| | ||||||||||  ||||||||||||| ||||||    
T  7941299 aacaaatctgcacccaaaaatacgtttctgttattcgtcaccagcgcaccatcgtgccac 7941240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 8756513 - 8756679
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 108  Q
    |||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  8756513 ttctaaacccttgttttcagccccttctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatctg 8756612  T
Q  109 cacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtg 175  Q
    |||| | ||||| || | |||||||||   ||||||||||| | || |||| ||||| | |||||||    
T  8756613 caccgagaaatatgtttctgttattcgcctccagcgcaccaacatggcacgttgcgatctcatcgtg 8756679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 18847124 - 18846984
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    |||| ||||||| |||||||||||||| ||||||| || | |||| |||   || ||||||||||| |||||||||||||||||||||| ||||||||||    
T  18847124 gctttaaatttgtaacaaatctgcacccaaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttt 18847025  T
Q  186 tccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  18847024 tccagtaccttgcctcaaaactgaaacctccaatcgtgcca 18846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 11008932 - 11009045
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    ||||||||| || |||||||||||||| ||||||| || | |||| || | |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  11008932 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 11009031  T
Q  186 tccagtgccttgcc 199  Q
    ||||||||||||||    
T  11009032 tccagtgccttgcc 11009045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 9176836 - 9176949
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    |||| ||||||  |||||||||||||| ||||||| || | |||| |||  ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  9176836 gctttaaatttataacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttt 9176935  T
Q  186 tccagtgccttgcc 199  Q
    ||||||||||||||    
T  9176936 tccagtgccttgcc 9176949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6764917 - 6764835
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  6764917 ttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 6764835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40637152 - 40637070
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  40637152 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagta 40637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 16932213 - 16932301
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  16932213 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 16932301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18847231 - 18847123
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||| |||| |||||||  | ||||  | |||||||||||||||||||||||||||||| | ||||||||| || ||    
T  18847231 ttgttgcctttctaaacccttgtttcaaccccctctatctcaaagtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaa 18847132  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  18847131 caaatctgc 18847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 56030522 - 56030443
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||| |||||||||||||||||||||||||||||||||  | |||||||||||||||| | |||||||||||||||||    
T  56030522 ttgttgtcattctaaacccttgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36378370 - 36378288
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||| |||||||||| ||||||||||||||||||||||    
T  36378370 ttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagta 36378288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14787686 - 14787771
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-atgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||||||||||||||||| ||||||| || | ||||| | ||||||||||||||||||||||||||||||||    
T  14787686 ttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagtat 14787771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 16934569 - 16934657
Alignment:
Q  140 cagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgccatg 228  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||||    
T  16934569 cagcgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccatg 16934657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 22783170 - 22783258
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||  |||||| |||||||| |||||||||    
T  22783170 gccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 22783258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9176729 - 9176821
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaa 93  Q
    |||||||  ||||||||||||||||||||||| ||||||| || |||| || ||||||||||||||||||||||||||| || | ||||||||    
T  9176729 ttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaa 9176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16934398 - 16934506
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  |||||||||||||| |||||||| |||||||  | |||| || ||||||||||||||||||||||||||||||   ||||||||| || ||    
T  16934398 ttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaa 16934497  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  16934498 caaatctgc 16934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19095960 - 19095880
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| ||||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  19095960 ttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 19095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24446834 - 24446914
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  24446834 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24446914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38270241 - 38270321
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||| |||||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  38270241 ttgttgcctttctaaacccttgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 38270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17662489 - 17662598
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||| |||||||||||||||||||||||||||||||||||  || | |||||    
T  17662489 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaatt 17662588  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  17662589 tggaacaaat 17662598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 18537734 - 18537829
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    |||||||||||||||| ||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||| ||| || | || ||||||||||    
T  18537734 ttctaaacccttgttttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaagcatcactcataaattggaacaaa 18537829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14633397 - 14633316
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||| |||||||||||| ||||||||  | |||||||||||||||||||||||||||||||| ||||||    
T  14633397 ttgttgcctttctaaacctttgtttcagccc-ttctatctcaaagtttactctgatacaaggtctatatttatagtgaaagta 14633316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 47868479 - 47868397
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||| |||||||||  ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  47868479 ttgttgcctttctaaacccttctttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagta 47868397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2891395 - 2891314
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctga-tacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||| | |||||| |||| ||||| ||||||||||||||||||||    
T  2891395 ttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaag 2891314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 22780805 - 22780893
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||  |||||| |||||||| |||||||||    
T  22780805 gccagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 22780893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16932044 - 16932152
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  |||||||||||||| |||||||| |||||||  | |||| || ||||||||||| ||||||||||||||||||   ||||||||| || ||    
T  16932044 ttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaa 16932143  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  16932144 caaatctgc 16932152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5101075 - 5100992
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||| ||||||||| ||| |||||||  | |||||| ||||| |||||||||||||||||||||||||||    
T  5101075 ttgttgtcattctaaacctttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaagtat 5100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 22801262 - 22801317
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtg 223  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  22801262 ccatcgtgccacgatttttccagttccttgcctcaaaactgaaacctccaatcgtg 22801317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38928433 - 38928536
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||| |||||||||||||| |||||||  | ||||||||| |||||| | |||||||||||||||||| ||| || | || ||||||    
T  38928433 ttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaagaatccctcataaattggaa 38928532  T
Q  101 caaa 104  Q
    ||||    
T  38928533 caaa 38928536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44600093 - 44600176
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||  ||||||||||||||||||||||| |||||||  | |||| || | ||||||||||||||||||||||||||||||    
T  44600093 ttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaagtat 44600176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 15032800 - 15032898
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    ||||||||||||||||||||||| | |||||  | |||||||||| ||| | |||||||||||||||||||||||| || | ||| |||||||||||||    
T  15032800 ttctaaacccttgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 15032898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 53405208 - 53405100
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct---tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaattt 96  Q
    |||||||| ||||||||||||||||||||||||   ||| |||  | |||||  |||||||||||||||||||||||||||||||||  || | ||||||    
T  53405208 ttgttgcctttctaaacccttgtttcagcccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaattt 53405109  T
Q  97 ggaacaaat 105  Q
    |||||||||    
T  53405108 ggaacaaat 53405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3937464 - 3937543
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||||||||||| || |||||||  | ||||||||||||| || ||||||||||||||||||||    
T  3937464 ttgttgcctttctaaacccttgtttcagctccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaag 3937543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47210995 - 47211106
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcat------gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| ||||||||||||||||||||||| ||||||| | |      |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  47210995 ttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 47211094  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  47211095 tttggaacaaat 47211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2485127 - 2485210
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccc-ttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||||||| |||||| ||||| ||  | |||| ||||||||||||||||||||||||||| ||||||    
T  2485127 ttgttgcctttctaaacccttgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 2485210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24348296 - 24348187
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||||   ||||||||||||||||||||||||||||||||  || | |||||    
T  24348296 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtataactcataaatt 24348197  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  24348196 tggaacaaat 24348187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33415742 - 33415821
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    ||||| || ||||||||||||||||||||||| |||||||  | |||||||||||||||| | |||||||| ||||||||    
T  33415742 ttgttacctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaa 33415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37313321 - 37313400
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||| ||||||||   |||||||||||||||||    
T  37313321 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 40999246 - 40999308
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||| ||||| |||||||||||||||| || | |||||||||||||||||||||    
T  40999246 gtttactctgatataaggtttatatttatagtaaaaataacccttaaaatttggaacaaatct 40999308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 16186100 - 16186199
Alignment:
Q  10 ttctaaacccttgtttc-agccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgct--taaaatttggaacaaatc 106  Q
    ||||||||||||||||  |||||| ||| |||  | ||||||||||||||||||| ||||||||||||||||||||| ||  ||||| ||||||||||||    
T  16186100 ttctaaacccttgtttttagccccctctctctcaaggtttactctgatacaaggtttatatttatagtaaaagtatccctcctaaaa-ttggaacaaatc 16186198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 19322766 - 19322701
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatag 75  Q
    |||||||||||||||||| |||| |||||||  | ||||||||||||||||| |||||||||||||    
T  19322766 ttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12396100 - 12396180
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||| ||||||||||||||| |||||||  | ||||||  | |||||| ||||||||||||||||||||    
T  12396100 ttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12396180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12401062 - 12401142
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||| ||||||||||||||| |||||||  | ||||||  | |||||| ||||||||||||||||||||    
T  12401062 ttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18409602 - 18409681
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||| | |||||||   ||||||| |||||||||  |||||||||||||||||||    
T  18409602 ttgttgcctttctaaacccttgtttcagcctc-tctatctcattgtttacactgatacaaattctatatttatagtaaaag 18409681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 25357671 - 25357593
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgct--taaaatttggaacaaatctgcacctaaaaatacg 122  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||  || |||||||||    
T  25357671 gtttactttgatacaaggtctatatttatagtaaaagtatccctcgtaaaa-ttggaacaaatctgagcccaaaaatacg 25357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 52043735 - 52043791
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||||||||||||||| ||| || |||| |||||||||||||    
T  52043735 tctgatacaaggtctatatttatagtaaaagcatccctaaaaaattggaacaaatct 52043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16453387 - 16453305
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| || |||||||||||||||||||| |||||||    |||| ||||||||||| | |||||||||||| |||||||    
T  16453387 ttgttgcctttttaaacccttgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaagta 16453305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6132950 - 6132871
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||| |||||||||| ||||| | |||||||  |||||||| | ||||||| ||||||||||||||||||||    
T  6132950 ttgttgcctttctgaacccttgtt-cagcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaag 6132871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8631674 - 8631760
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | |||| || |||||||| ||||||||||||||| ||||||    
T  8631674 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtgaaagta 8631760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11008821 - 11008918
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtt----tactctgatacaaggtctatatttatagtaaaagtatcgcttaaaat 94  Q
    |||||||| ||||||||||||||||||||||| |||||||   | |     ||  ||||||||||||||||||||||||||||||| | |||||||||    
T  11008821 ttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagcctgatacaaggtctatatttatagtaaaagtcttgcttaaaat 11008918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41997570 - 41997494
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagta 77  Q
    ||||| || |||| ||| |||||||||||||| | |||||  | |||||||||||||||| ||||||||||||||||    
T  41997570 ttgtttcctttctgaacacttgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagta 41997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18709418 - 18709531
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-------atgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-a 91  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||       | |||||  || ||||||||||||||||||||||||||||||  || | |    
T  18709418 ttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactcata 18709517  T
Q  92 aatttggaacaaat 105  Q
    ||||||||||||||    
T  18709518 aatttggaacaaat 18709531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 4569980 - 4569899
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttatt 133  Q
    ||||||||||||  |||||||||||| |||||| | |||||||| |||||||||||| || || ||||||||| | |||||||    
T  4569980 tctgatacaaggcttatatttatagtgaaagtaacccttaaaatatggaacaaatcttca-ctgaaaatacgtttctgttatt 4569899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 22132705 - 22132759
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  22132705 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 22132759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 7941251 - 7941192
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcccc--aaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||| ||||||||||||||||||| |  ||||||||||||||| |||||||||    
T  7941251 ccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgcca 7941192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 11434887 - 11434828
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcccc--aaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||| |||||| |  ||||||||||||||| |||||||||    
T  11434887 ccatcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaacctcc-atcgtgcca 11434828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 22134937 - 22134990
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    ||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  22134937 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 22134990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 28453715 - 28453658
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaa-atttggaacaaatct 107  Q
    |||||||||||||||||||||||||||||| |||| || ||| | |||||||||||||    
T  28453715 tctgatacaaggtctatatttatagtaaaaatatccctcaaataattggaacaaatct 28453658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 12102161 - 12102061
Alignment:
Q  10 ttctaaacccttgttt-cagcccct-tctatcttcatgtttactctgatacaaggtctatatttatagtaaaag-tatcgcttaaaatttggaacaaatc 106  Q
    |||||||||||||||| |||||||  |||||||  | ||||  ||||||||||| |||||||||||||||||||  ||| || |||| ||||||||||||    
T  12102161 ttctaaacccttgttttcagcccccctctatctcaaggttttatctgatacaagatctatatttatagtaaaagaaatccctaaaaaattggaacaaatc 12102062  T
Q  107 t 107  Q
    |    
T  12102061 t 12102061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 16638712 - 16638652
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac 111  Q
    ||||||||||||| ||||||| ||| || |||| | |||||||||||||||||| ||||||    
T  16638712 tctgatacaaggtttatatttttagaaagagtaacccttaaaatttggaacaaacctgcac 16638652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 22780688 - 22780744
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  22780688 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 22783053 - 22783109
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  22783053 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 26557614 - 26557563
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 106  Q
    ||||||||| |||||||||||||||| |||| || |||| ||||||||||||    
T  26557614 atacaaggtttatatttatagtaaaattatccctcaaaaattggaacaaatc 26557563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 36380408 - 36380370
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  36380408 gtttactctgatacaaagtccatatttatagtaaaagta 36380370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 16455356 - 16455283
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    ||||||||||||||||||||||| | |||||    |||| ||||||||||| | ||||||| |||| |||||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctcggtttgctctgatacaaagcctatattaatagcaaaagta 16455283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 18535106 - 18535187
Alignment:
Q  23 tttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    |||||||||| |||||||  | |||||||||||  | |||||||||||||| ||||||| ||| || | || ||||||||||    
T  18535106 tttcagccccctctatctcaaggtttactctgaatcgaggtctatatttattgtaaaagcatccctcataaattggaacaaa 18535187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22132645 - 22132677
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct 33  Q
    |||||||| ||||||||||||||||||||||||    
T  22132645 ttgttgcctttctaaacccttgtttcagcccct 22132677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22134870 - 22134902
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct 33  Q
    |||||||| ||||||||||||||||||||||||    
T  22134870 ttgttgcctttctaaacccttgtttcagcccct 22134902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2913 - 2688
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  2913 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaa 2814  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||     
T  2813 caaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcct 2714  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  2713 caaaactgaaacctccaatcgtgcca 2688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 27306484 - 27306709
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27306484 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 27306583  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | ||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||| || ||||||     
T  27306584 caaatctgcacccaaaaatacgtttctgttattcgctgctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttgcct 27306683  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  27306684 caaaactgaaacctccaatcgtgcca 27306709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44598 - 44373
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44598 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggta 44499  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| ||||||| || ||||||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||      
T  44498 caaatctgcacccaaaaatatgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttgcgt 44399  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||||||||||    
T  44398 caaacttgaaacctccaatcgtgcca 44373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 35663 - 35438
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | |||| |||||||||||||||||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35663 ttgttgtctttctgaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 35564  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | || |||| | ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| |||||     
T  35563 caaatctgcacccaaaaatacgtttctgctatttgctgccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct 35464  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||||||||||    
T  35463 caaacttgaaacctccaatcgtgcca 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18567647 - 18567422
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18567647 ttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaa 18567548  T
Q  101 caaatctgcacc-taaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    | ||| ||||||  |||||||||| | ||||||||||||||||||||||||| ||||| | || ||||||||||||||||||    ||||||| ||||||    
T  18567547 c-aatttgcaccaaaaaaatacgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttgcc 18567449  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
     ||||||||||||||||||||||||||    
T  18567448 tcaaaactgaaacctccaatcgtgcca 18567422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31435302 - 31435527
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31435302 ttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaa 31435401  T
Q  101 caaatctgcacc-taaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    | ||| ||||||  |||||||||| | ||||||||||||||||||||||||| ||||| | || ||||||||||||||||||    ||||||| ||||||    
T  31435402 c-aatttgcaccaaaaaaatacgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttgcc 31435500  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
     ||||||||||||||||||||||||||    
T  31435501 tcaaaactgaaacctccaatcgtgcca 31435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 3878611 - 3878381
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatt----tatagtaaaagtatcgcttaaaat 94  Q
    |||||| | ||||||||||||||||||||||| ||||||| |||  |||| |||||||||||||||||||||    ||||||||||||||||||||||||    
T  3878611 ttgttgtctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaat 3878512  T
Q  95 ttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcc 194  Q
    |||||||||||||||||| |||| ||||| | ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  3878511 ttggaacaaatctgcacccaaaa-tacgtttctgttattcgctgccagcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgct 3878413  T
Q  195 ttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||| ||||  ||||||||||||||||||||    
T  3878412 ttgcctcaaacttgaaacctccaatcgtgcca 3878381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25542564 - 25542339
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    ||||| || ||||||||| |||||||||||||| ||||||  | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25542564 ttgttacctttctaaacctttgtttcagcccct-ctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 25542466  T
Q  101 caaatctgcac-ctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
     |||||| ||| | ||||||| || | |||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  25542465 taaatctacactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttgcc 25542366  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
      |||||||||||||||||||||||||    
T  25542365 ttaaaactgaaacctccaatcgtgcca 25542339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 1049550 - 1049710
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  1049550 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 1049649  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||| |||||||||| | |||||||||  ||||||||||| || |||||||||    
T  1049650 caaatctgcacccaaaaatacgtttctgttattcgccgccagcgcaccttcgtgccacgat 1049710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 22392495 - 22392319
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacc 112  Q
    |||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  22392495 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcact 22392396  T
Q  113 taaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttcca 189  Q
     |||||||| | | |||| || |   ||||||||||||| | ||||| ||||| ||||||||| |||||||| ||||    
T  22392395 gaaaaatacatttctgttttttgcctccagcgcaccatcgtaccacgttgcgatcccatcgtggcacgatttctcca 22392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 26804603 - 26804448
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||||    ||||||||||||||||||||||||||||||||||||||||||||    
T  26804603 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 26804508  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||||||||||  ||||||||| | ||||||| | ||||||||||||||| |||||||||    
T  26804507 caaatctgcacc-caaaatacgtttctgttatttgctgccagcgcaccatcgtgccacgat 26804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40836997 - 40837158
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||| |||||||||| || |||| ||  ||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  40836997 ttgttgcctttctaaacccttctttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaa 40837096  T
Q  101 caaatctgcac-ctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||||||||| | ||||||| || | | || |||| ||||||| ||||||| |||||||||    
T  40837097 caaatctgcactcaaaaaatatgtttctatttttcgctgccagcacaccatcgtgccacgat 40837158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 7188568 - 7188445
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 108  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||||||| |||||||||||||||||||||||| || | ||| |||||||||||||     
T  7188568 ttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatctc 7188469  T
Q  109 cacctaaaaatacgtctatgttat 132  Q
      || |||||||||| ||||||||    
T  7188468 agcccaaaaatacgtttatgttat 7188445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 2935217 - 2935137
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  2935217 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 2935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 9027540 - 9027620
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  9027540 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 9027620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 22137025 - 22136945
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  22137025 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 22136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 40552052 - 40551972
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  40552052 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 40551972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 22108014 - 22107947
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaa 205  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22108014 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaa 22107947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37412383 - 37412462
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||||||||||||||||||||||||||| | ||||| || |||||||||||| |||||||||||||||||||||||    
T  37412383 ttgttgccattctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 40549774 - 40549707
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaa 205  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40549774 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaa 40549707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 1047356 - 1047444
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  1047356 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 1047444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22251797 - 22251893
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttg 97  Q
    |||||||| |||||||| |||||||||||| | |||||||  | |||||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  22251797 ttgttgcctttctaaactcttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaagtgtcgcttaaaatttg 22251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13099731 - 13099814
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||||||||||||||||| |||| |||||||  | ||||||| |||| |||||||||||||||||||||||||||    
T  13099731 ttgttgccattctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaagtat 13099814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21990184 - 21990106
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||| |||||||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  21990184 ttgttgtcattctaaacccttgtttcagcccct-ctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 42331254 - 42331337
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||||||||||||||||| |||||||  | ||||| |||||||||| |||||||||||||||||||||||    
T  42331254 ttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagtat 42331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31156166 - 31156271
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttgga 99  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| |  ||||||||| |||||||||||||||||||||| ||| | |||||||||    
T  31156166 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaatttgga 31156265  T
Q  100 acaaat 105  Q
    ||||||    
T  31156266 acaaat 31156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44724613 - 44724533
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| | ||||| || |||||| ||||||||| ||||||||||||||||||||    
T  44724613 ttgttgcctttctaaacccttgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaag 44724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11355292 - 11355189
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| | |||||||||||||||||| ||| || | || ||||||    
T  11355292 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaagaatccctcataaattggaa 11355193  T
Q  101 caaa 104  Q
    ||||    
T  11355192 caaa 11355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20137364 - 20137467
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||| | | |||||||||||||||| ||| || | || ||||||    
T  20137364 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaagaatccctcataaattggaa 20137463  T
Q  101 caaa 104  Q
    ||||    
T  20137464 caaa 20137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21680061 - 21679981
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| || |||||| ||||||||||||||||||||    
T  21680061 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 21679981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22828888 - 22828972
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||| |||||||| |||||||||||||| |||||||  | |||||||| ||||||| | ||||||||||||||||||||||    
T  22828888 ttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagtatc 22828972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 45366526 - 45366458
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgt 123  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||  ||||||||||    
T  45366526 atacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaaatacgt 45366458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 443629 - 443546
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||| |||||| ||| || |||||||  | |||||||||||| ||| |||||||||||||||||||||||    
T  443629 ttgttgccattctaaaccattgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagtat 443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3035755 - 3035646
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  3035755 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 3035656  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  3035655 tggaacaaat 3035646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 28485600 - 28485491
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| |||||||||||||||||| ||||||||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  28485600 ttgttgcctttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 28485501  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  28485500 tggaacaaat 28485491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38394020 - 38393911
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  38394020 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 38393921  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  38393920 tggaacaaat 38393911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24258497 - 24258423
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatag 75  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||   ||||||||||||    
T  24258497 ttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 26804462 - 26804408
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgt 222  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  26804462 ccatcgtgccacgatttttccactgccttgcctcaaaactgaaacctccaatcgt 26804408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4296190 - 4296271
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatac-aaggtctatatttatagtaaaag 81  Q
    |||||| ||||||||||||||||||||||||| |||||||  | |||||| ||||||| || ||||||||||||||||||||    
T  4296190 ttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaag 4296271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 198
Target Start/End: Complemental strand, 42006545 - 42006404
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgtta-ttcgttgccagcgcaccatcct 153  Q
    ||||| ||| ||||||||||||||||||| | |||||||| |||||||||||| || || ||||||||| ||||||| ||| ||  || || |||||| |    
T  42006545 atacacggtttatatttatagtaaaagtaacccttaaaatatggaacaaatcttca-ctgaaaatacgtttatgttatttcctt--caacgtaccatcgt 42006449  T
Q  154 gccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||| | |||  ||||||||||||||||||| ||||| |||||    
T  42006448 gccacgttacgattccatcgtgccacgattttttcagtgacttgc 42006404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42223191 - 42223110
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccc-cttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||||||||||||| ||| | |||||||  | |||||||||||||||| | ||||||||||||||||||    
T  42223191 ttgttgccattctaaacccttgtttcatcccacatctatctcaaggtttactctgatacaaagcctatatttatagtaaaag 42223110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7094677 - 7094759
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||||||||||||||||||||||||||| ||||||| ||   | |||| ||||||||||||||||||||||||| ||||    
T  7094677 ttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaa 7094759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7470277 - 7470359
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | ||||| |||||||||||||||||||||||||||||    
T  7470277 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 1049699 - 1049754
Alignment:
Q  171 tcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  1049699 tcgtgccacgatttttccagtaccttgcttcaaaactgaaacctccaatcgtgcca 1049754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 3677301 - 3677235
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    ||||||||||||||||||||| |||||| || |||||||||||| |||| ||||||||||||||||||    
T  3677301 taaacccttgtttcagcccct-ctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 20091808 - 20091903
Alignment:
Q  14 aaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    |||||||||||| ||||||| |||||||  | ||||||||||||| || |||||||||||||||||||||||| || | ||| |||||||||||||    
T  20091808 aaacccttgttttcagccccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 20091903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 21678099 - 21678020
Alignment:
Q  2 tgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||| ||||||||||||||||||||||| |||||||  | ||||||  ||||||||  |||||||||||||||||||    
T  21678099 tgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaag 21678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20297396 - 20297309
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||||||||||||||||| ||||||| ||   | |||||  ||||||||||||| |||||| ||||||||||||    
T  20297396 ttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtccatatttttagtaaaagtat 20297309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7092430 - 7092512
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||| ||||||||||||||||||||||||| || ||||   |||  |||| ||||||||||||||||||||||||||||||    
T  7092430 ttgttgtcattctaaacccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7472235 - 7472317
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||  ||||||||||||||||||||||| |||||||   |||  ||||| |||||||||||||||||||||||||||||    
T  7472235 ttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11757263 - 11757153
Alignment:
Q  1 ttgttgccattctaaaccc-ttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaat 94  Q
    |||||| |||||||||||| ||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | ||||    
T  11757263 ttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 11757164  T
Q  95 ttggaacaaat 105  Q
    |||||||||||    
T  11757163 ttggaacaaat 11757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18345575 - 18345466
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcat----gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| |||||||||||||||||| |||| ||||||| | |    ||| |  |||||||||||||||||||||||||||||||||  || | |||||    
T  18345575 ttgttgcctttctaaacccttgtttcaaccccctctatctccctcaaagttcagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 18345476  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  18345475 tggaacaaat 18345466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48457687 - 48457601
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | |||||  ||||||||||||||||||||||||| ||||||    
T  48457687 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtgaaagta 48457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7349528 - 7349639
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-----tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| |||||||||| |||||||||||| |||||||     |||  |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  7349528 ttgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 7349627  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  7349628 tttggaacaaat 7349639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7351907 - 7352018
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-----atgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||     | |||||  |||||||||||| ||||||||||||||||||||  || | |||    
T  7351907 ttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagtataactcataaa 7352006  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  7352007 tttggaacaaat 7352018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9680853 - 9680768
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatg-tttac-tctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||||||||| |||| |||||||   ||| | ||||| |||||||||||||||||||||||||||||||    
T  9680853 ttgttgcccttctaaacccttgtttcaaccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaag 9680768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 24465574 - 24465503
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaa 80  Q
    ||||||||||||||||||||||| |||||||  | |||||| |||||||||| |||||||| ||||||||||    
T  24465574 ttctaaacccttgtttcagccccctctatctcaaggtttacatctgatacaaagtctatatctatagtaaaa 24465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20299493 - 20299405
Alignment:
Q  1 ttgttgccattctaaaccc-ttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| |||||||||||| ||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||    
T  20299493 ttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 20299405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 24817613 - 24817682
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaa 79  Q
    |||||||||||||||||||||||| ||||||  | |||||| |||||||||||||||||||||||| ||||    
T  24817613 ttctaaacccttgtttcagcccct-ctatctcaaggtttacatctgatacaaggtctatatttatattaaa 24817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 39146252 - 39146322
Alignment:
Q  11 tctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||||||||||||||| || ||||  | |||||| ||||||||  ||||||||||||||||||||    
T  39146252 tctaaacccttgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaag 39146322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20626072 - 20625990
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | ||||| ||||||| |||||||||||||||| ||||    
T  20626072 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaa 20625990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20629963 - 20629881
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | ||||| ||||||| |||||||||||||||| ||||    
T  20629963 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaa 20629881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20642382 - 20642300
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | ||||| ||||||| |||||||||||||||| ||||    
T  20642382 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaa 20642300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24748628 - 24748548
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||||||||||||||||||| ||||  |  | |||||| ||||||||| ||||||||||||| ||||||    
T  24748628 ttgttgtctttctaaacccttgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaag 24748548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 40837144 - 40837202
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||    
T  40837144 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgcca 40837202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 30906327 - 30906389
Alignment:
Q  23 tttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||| |||||||  |  |||||||| ||||||||||||||||||||| |||||||||    
T  30906327 tttcagccccctctatctcaagatttactcttatacaaggtctatatttatagcaaaagtatc 30906389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 38396269 - 38396215
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  38396269 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 38396215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 43253830 - 43253884
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  43253830 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 43253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 1606452 - 1606399
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    ||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  1606452 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 1606399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 6332248 - 6332176
Alignment:
Q  13 taaacccttgtttc-agccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||| |||||| ||| ||| || | ||||||||||||||| | |||||||||||||||||||||    
T  6332248 taaacccttgtttccagccccctctctct-caaggttactctgatacaagttttatatttatagtaaaagtatc 6332176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 1047239 - 1047295
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  1047239 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 1047295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 2935335 - 2935279
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  2935335 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 2935279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 9027411 - 9027467
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  9027411 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 9027467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 22108143 - 22108087
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  22108143 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22108087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 22137154 - 22137098
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  22137154 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22137098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 40549903 - 40549847
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  40549903 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 40549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 40552181 - 40552125
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  40552181 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 40552125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1850015 - 1849976
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  1850015 ttgttgcctttctaaacccttgtttcagccccctctatct 1849976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 1849943 - 1849894
Alignment:
Q  57 acaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    ||||||||||||||||||||||||||||  || | |||||||||||||||    
T  1849943 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 1849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 6048652 - 6048599
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtatcgcttaaa-atttggaacaaatct 107  Q
    ||||||||||||||||||||||||||| ||| || ||| | |||||||||||||    
T  6048652 atacaaggtctatatttatagtaaaagcatccctcaaataattggaacaaatct 6048599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25276175 - 25276095
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||   |||||| |||||| |||||||  | |||| ||||||||||| |  |||||||||||||||||    
T  25276175 ttgttgcctttctaaattattgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaag 25276095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10400085 - 10400310
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| ||||||||||||||||||||||||| ||||||| |  |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10400085 ttgttgtcattctaaacccttgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaa 10400184  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||     
T  10400185 caaatctgcacccaaaaatacgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttgcct 10400284  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||||||||||    
T  10400285 caaacttgaaacctccaatcgtgcca 10400310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 51750063 - 51749845
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51750063 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 51749964  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | |||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  51749963 caaatctgcacccaaaaatacgtttctgttattcgccgccagcgcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcct 51749864  T
Q  201 c--aaaactgaaacctcca 217  Q
    |  ||||||||||||||||    
T  51749863 caaaaaactgaaacctcca 51749845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 51752389 - 51752163
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    ||||| || |||||||| |||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51752389 ttgttacctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 51752290  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| |||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||     
T  51752289 caaatctgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgcct 51752190  T
Q  201 c--aaaactgaaacctccaatcgtgcca 226  Q
    |  ||||||||||||||| |||||||||    
T  51752189 caaaaaactgaaacctcc-atcgtgcca 51752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13761861 - 13761644
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13761861 ttgttgcctttctaaacccttgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 13761762  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc- 199  Q
    |||||||||||| |||||||||| | |||||||||  |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||     
T  13761761 caaatctgcacccaaaaatacgtttctgttattcgccgccagcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcct 13761662  T
Q  200 ccaaaactgaaacctcca 217  Q
    | ||||||||||||||||    
T  13761661 caaaaactgaaacctcca 13761644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15823570 - 15823345
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| | |||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15823570 ttgttgcctttctaaacccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 15823471  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| | ||||||| || | ||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||     
T  15823470 caaatctgcatccaaaaatatgtttctgttatttgctgctagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttgcct 15823371  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||||||||||    
T  15823370 caaacttgaaacctccaatcgtgcca 15823345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6823909 - 6823682
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct-tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| |||||||||||||||||||||||  |||||||  | |||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  6823909 ttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttgga 6823810  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||| |||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  6823809 acaaatctgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgcc 6823710  T
Q  200 cc--aaaactgaaacctccaatcgtgcca 226  Q
     |  ||||||||||||||| |||||||||    
T  6823709 tcaaaaaactgaaacctcc-atcgtgcca 6823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 20302483 - 20302257
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  20302483 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaa 20302384  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||| |||||| ||||||| || | |||||||||  |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||     
T  20302383 caaatatgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcct 20302284  T
Q  201 c--aaaactgaaacctccaatcgtgcca 226  Q
    |  ||||||||||||||| |||||||||    
T  20302283 caaaaaactgaaacctcc-atcgtgcca 20302257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 28842519 - 28842292
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||  |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28842519 ttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttgg 28842420  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    ||||||| |||||  ||||||| || | |||| |||| ||||||  ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  28842419 aacaaatttgcactcaaaaatatgtttctgtttttcgctgccaggacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgc 28842320  T
Q  199 cccaaaactgaaacctccaatcgtgcca 226  Q
    |  |||||||||||||||||||||||||    
T  28842319 ctaaaaactgaaacctccaatcgtgcca 28842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 13215105 - 13214880
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13215105 ttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 13215006  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | ||||||| | ||||| | ||||||| ||||||| ||| | |||||| ||||||||    ||||||| ||||||     
T  13215005 caaatctgcacccaaaaatacgtttttgttatttgctgccaacacaccatcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttgcct 13214906  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  13214905 caaaactgaaacctccaatcgtgcca 13214880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 28840704 - 28840477
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    ||||| || |||||||||||||||||| |||| | ||||| |||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28840704 ttgtttcctttctaaacccttgtttcatccccctgtatctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 28840605  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||||||||||  ||||||| || | |||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  28840604 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttgc 28840505  T
Q  199 cccaaaactgaaacctccaatcgtgcca 226  Q
    |  |||||||||||||||||||||||||    
T  28840504 ctaaaaactgaaacctccaatcgtgcca 28840477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 28207323 - 28207548
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28207323 ttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 28207422  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| ||||| |||| |||||||||||  |||||||||||||| ||||||| || ||||||||||||||| ||    |||| || ||||||     
T  28207423 caaatctgcacccaaaaaaacgtttatgttattcgccgccagcgcaccatcgtgccacgttgtgaccccatcgtgccatgaaaaatccaatgacttgcct 28207522  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||||||||||    
T  28207523 caaagttgaaacctccaatcgtgcca 28207548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 41646944 - 41646719
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41646944 ttgttgcctttctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 41646845  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| | ||||||| || | ||||||||| |||||| |||||||| ||||||| ||| | |||| ||||||||||    ||||||| ||||||     
T  41646844 caaatctgcatccaaaaatatgtttctgttattcgctgccagtgcaccatcgtgccacgttgcaatcccaccgtgccacgaaaaatccagtgacttgcct 41646745  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||| ||||||||||    
T  41646744 caaaactgaaacctctaatcgtgcca 41646719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 47451672 - 47451508
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||||||| |||||||||||| |||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47451672 ttgttgccattccaaacccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaa 47451573  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcga 165  Q
    |||||||||||| |||||||||| | ||||||||| || |||||||||||| |||||||||||||    
T  47451572 caaatctgcaccaaaaaatacgtttctgttattcgctgtcagcgcaccatcgtgccacgatgcga 47451508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 30790659 - 30790876
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 108  Q
    |||||||| ||||||| |||| || |||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30790659 ttctaaactcttgttttcagctccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 30790758  T
Q  109 cacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactg 208  Q
    |||  |||||||||| |||||| |||    ||||||||||||| ||||||  ||||| |||||||||||||| ||||||||||| |||||  || |||||    
T  30790759 cactgaaaaatacgtttatgtttttcccctccagcgcaccatcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgcttcataactg 30790858  T
Q  209 aaacctccaatcgtgcca 226  Q
    |||| |||||||||||||    
T  30790859 aaacatccaatcgtgcca 30790876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 3579877 - 3580093
Alignment:
Q  5 tgccattctaaacccttgtttcagcccct--tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaaca 102  Q
    |||| |||| ||||||||||||||||||   |||||||  |  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3579877 tgcctttctgaacccttgtttcagccccccctctatctcaaattttacgctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaaca 3579976  T
Q  103 aatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccca 202  Q
    ||| |||||   ||||||||| |||| ||||||  |||||||||||||| ||||||| ||| | |||| ||| |||||||||||||| || |||||| ||    
T  3579977 aatttgcactctaaaatacgtttatgatattcgccgccagcgcaccatcgtgccacgttgcaatcccaccgtaccacgatttttccaatgacttgcctca 3580076  T
Q  203 aaactgaaacctccaat 219  Q
     ||||||||| ||||||    
T  3580077 taactgaaacatccaat 3580093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 39462534 - 39462317
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||| |||||||||||   |||||||  | |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  39462534 ttctaaacctttgtttcagccttctctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgc 39462435  T
Q  110 a-cctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactg 208  Q
    | || |||||||||| | ||||||||  ||| ||||||||||| ||||||  ||| | |||||||||||||||    |||| || |||||| ||||||||    
T  39462434 acccaaaaaatacgtttctgttattcactgcaagcgcaccatcgtgccacattgcaatcccatcgtgccacgaaaaatccactgacttgcctcaaaactg 39462335  T
Q  209 aaacctccaatcgtgcca 226  Q
    ||||||| ||||||||||    
T  39462334 aaacctctaatcgtgcca 39462317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6823039 - 6822879
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  6823039 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaa 6822940  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||| |||||||| | | | |||||||  |||||||||||||| |||||||||    
T  6822939 caaatctgcacccaaaaatacatttctattattcgccgccagcgcaccatcgtgccacgat 6822879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 38925735 - 38925892
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||| ||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38925735 ttgttgcctttctgaactcttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 38925834  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccac 158  Q
     ||||||||||| ||||||||   | |||| |||| ||||| ||| ||||| ||||||    
T  38925835 taaatctgcacccaaaaatacacttctgttgttcgctgccaacgccccatcgtgccac 38925892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 14098229 - 14098385
Alignment:
Q  3 gttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaaca 102  Q
    |||||| || |||||| ||||||||| ||| |||||||  | ||||| | |||||||||||||||||||||||| |||||||  |||||||||||||||     
T  14098229 gttgcctttttaaaccattgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaac- 14098327  T
Q  103 aatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||| ||| ||||    
T  14098328 aatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgcaacga 14098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 49687496 - 49687405
Alignment:
Q  69 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |||||||||||| ||||||||    
T  49687496 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgtcagcgcaccatcgtgccacga 49687405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 16226034 - 16225946
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  16226034 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 16225946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 47177224 - 47177137
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||||||    
T  47177224 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtcttgcccaaaaactaaaacctcc-atcgtgcca 47177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17324893 - 17324976
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||||||||||||||| |||||| | |||||||| |||||||||| | |||||||||||||||||||||||||||    
T  17324893 ttgttgccattctaaacccttgttttagccccctgtatcttcaggtttactctggttcaaggtctatatttatagtaaaagtat 17324976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 16231625 - 16231517
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  ||||| ||||||||||||||||| |||||||  | |||| || |||||||||||||||||||||||||||||| | ||||||||| || ||    
T  16231625 ttgttgcttttctagacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaa 16231526  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  16231525 caaatctgc 16231517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 18800835 - 18800910
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||||| ||||||||||||||| |||||  | |||||||||||||||||||||||||||||||||||||||||    
T  18800835 ttctaaacctttgtttcagccccttgtatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatc 18800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 42922249 - 42922151
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    |||||||||||| ||||| |||| |||||||| | ||||||||||||||||  ||||||||||||||||||||||| || | |||||||||||||||||    
T  42922249 ttctaaacccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatct 42922151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 49495468 - 49495540
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||||||||| |||||||  | |||||||||||||||| ||||||||||||||||||||||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatc 49495540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 23783376 - 23783305
Alignment:
Q  147 ccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  23783376 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 23783305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28998510 - 28998593
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||||||||||||||| | |||||||  | |||||||||||| ||| |||||||||||||||||||||||    
T  28998510 ttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagtat 28998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29004226 - 29004309
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||||||||||||||| | |||||||  | |||||||||||| ||| |||||||||||||||||||||||    
T  29004226 ttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagtat 29004309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16226191 - 16226085
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  |||||||||||||||| || ||| |||||||  | |||| || |||||||||||||||||||||||||||||| | ||||||||| || ||    
T  16226191 ttgttgcttttctaaacccttgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaa 16226092  T
Q  101 caaatct 107  Q
    |||||||    
T  16226091 caaatct 16226085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 47179572 - 47179487
Alignment:
Q  141 agcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||  |||||| |||||||| |||||||||    
T  47179572 agcgcaccatcgtgccacgatgagaccccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 47179487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 14183850 - 14183923
Alignment:
Q  8 cattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||||||||||  |||||||  | ||||||||||||||| |||||||||||||||||||||    
T  14183850 cattctaaacccttgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaag 14183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31423131 - 31423215
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| |  |||||||||||||||||||||    
T  31423131 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagtatc 31423215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18307133 - 18307054
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| |||||||||||||| ||||    
T  18307133 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20291481 - 20291390
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaa 92  Q
    |||||||| |||||||||||||||||| | || |||||||  |  ||| |||| |||||||||||||||||||||||||||| |||||||||    
T  20291481 ttgttgcctttctaaacccttgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaa 20291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25248771 - 25248850
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||| |||||||||| ||| ||||    
T  25248771 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaa 25248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25251532 - 25251611
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||| | ||||||||| ||||||||||||| |||||||  | |||||||||||||||| |||||||||||||||||||    
T  25251532 ttgttgtctttctaaacctttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 47906294 - 47906183
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-----atgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||||||||||||||||||||||||||| ||||||| ||     | |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  47906294 ttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 47906195  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  47906194 tttggaacaaat 47906183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2617540 - 2617460
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||||||||||||||||| | |||||||  | |||| ||||||||||||||||||||||||||| ||||    
T  2617540 ttgttgtctttctaaacccttgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 9241343 - 9241465
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct-tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttgg 98  Q
    |||||||| ||||||||| |||||||||||||  |||||||| | |||||||||||||||| | |||||||||||||||||||| | |  | ||| ||||    
T  9241343 ttgttgcctttctaaacc-ttgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagtaacccccataaaattgg 9241441  T
Q  99 aacaaatctgcacctaaaaatacgt 123  Q
    |||||||||| ||| ||||||||||    
T  9241442 aacaaatctg-acccaaaaatacgt 9241465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11457732 - 11457812
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||||| ||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  11457732 ttgttgtctttctaaaccattgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 11457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16428677 - 16428569
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttgga 99  Q
    |||||||| ||||||||||||||||||||||| |||||||    |||| |||||||| ||   |||||||||||||||||||||| |||| ||| || ||    
T  16428677 ttgttgcctttctaaacccttgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagtatcccttataaaattcga 16428578  T
Q  100 acaaatctg 108  Q
    |||||||||    
T  16428577 acaaatctg 16428569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 47177386 - 47177276
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||  ||||||||||||||||||||||| |||||||   |||  |||| || ||||||||||||||||||||||||||||||   ||||||||| |    
T  47177386 ttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatct 47177287  T
Q  97 ggaacaaatct 107  Q
    | |||||||||    
T  47177286 gtaacaaatct 47177276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 47179737 - 47179627
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||  ||||||||||||||||||||||| |||||||   |||  |||| || ||||||||||||||||||||||||||||||   ||||||||| |    
T  47179737 ttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatct 47179638  T
Q  97 ggaacaaatct 107  Q
    | |||||||||    
T  47179637 gtaacaaatct 47179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 48665201 - 48665090
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttc------tatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| |||||||||||||||||| |||| ||      |||||| | |||||||||||| |||||||||||||||||||||||||||  || | |||    
T  48665201 ttgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaa 48665102  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  48665101 tttggaacaaat 48665090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50076929 - 50077009
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||| |||||||||||||| ||||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  50076929 ttgttgtctttctaaatccttgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6995957 - 6996040
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||| ||||||||| ||||||| ||||| |||||||  |  ||||||||||| ||||||||||||||||| |||||||||    
T  6995957 ttgttgcctttctaaaccgttgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaagtat 6996040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9463501 - 9463612
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-----tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| ||||||||||||||||||||||| |||||||     |||  |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  9463501 ttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 9463600  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  9463601 tttggaacaaat 9463612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17318917 - 17318838
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||| ||||||||   |||||||||||||||||    
T  17318917 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaa 17318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31735778 - 31735887
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| |||||||||||||||| |||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  31735778 ttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 31735877  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  31735878 tggaacaaat 31735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 50079087 - 50079158
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||||||||| |||||||  | |||||| || |||||| ||||||||||||||||||||    
T  50079087 ttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 50079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 2510583 - 2510690
Alignment:
Q  3 gttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttg 97  Q
    |||||| || |||||||||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||||    
T  2510583 gttgcctttataaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttg 2510682  T
Q  98 gaacaaat 105  Q
    ||||||||    
T  2510683 gaacaaat 2510690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12302762 - 12302849
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatg-tttac-tctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||  ||||||||||||||||||||||| |||||||   ||| | ||||| |||||||||||||||||||||||||||||||||    
T  12302762 ttgttgcatttctaaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagta 12302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27337195 - 27337282
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | |||||  || ||||||||||||||||||||||||||||||    
T  27337195 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtat 27337282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 8347535 - 8347634
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    |||||||||||||||||| |||| |||||||  | |||||| ||||||||||||||||| ||||||||||||||| | || | ||| |||||||||||||    
T  8347535 ttctaaacccttgtttcaaccccctctatctcaaggtttacatctgatacaaggtctat-tttatagtaaaagtacccctcataaaattggaacaaatct 8347633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17186385 - 17186465
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||| |||||||||| |||||||  | |||| |||||||||||  |||||||||||| ||||||    
T  17186385 ttgttgcctttctaaacccttatttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaag 17186465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21948444 - 21948526
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | ||||| | |||||||||||||||||||||||||||    
T  21948444 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaa 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 23783406 - 23783362
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgat 182  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  23783406 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 23783362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 26613503 - 26613603
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatct-tcatgtttac-tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 106  Q
    |||||||||||||||| ||||||| ||||||| ||| | || | ||||||||||||||||||||||||| ||||| ||| || |||| ||||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatctctcaaggtttcatctgatacaaggtctatatttatagcaaaagaatccctcaaaaattggaacaaatc 26613602  T
Q  107 t 107  Q
    |    
T  26613603 t 26613603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31489939 - 31489859
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||| || |||||||||||||||||| |||| |||||||  | |||||| || |||||| ||||||||||||||||||||    
T  31489939 ttgttacctttctaaacccttgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 31489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 39932097 - 39932017
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| ||||||||||||||||||||||| ||||||| || | ||||  ||| |||||||||||||||||||||||||    
T  39932097 ttgttgcctttctaaacccttgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 43104139 - 43104099
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43104139 gtttactctgatacaaggtctatatttatagtaaaagtatc 43104099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2949488 - 2949571
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||||||||||||||||| |||||||  | |||| ||| ||| |||  ||||||||||| ||||||||||    
T  2949488 ttgttgtcattctaaacccttgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaagtat 2949571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9459674 - 9459785
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-----tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||| | ||||||||||||||||||||||| |||||||     |||  |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  9459674 ttgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 9459773  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  9459774 tttggaacaaat 9459785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27339387 - 27339496
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| |||||| |||||||||||||||| |||||||   |||  |||||  || ||||||||||||||||||||||||||||||  || | |||||    
T  27339387 ttgttgcctttctaagcccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactcataaatt 27339486  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  27339487 tggaacaaat 27339496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 6822893 - 6822834
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcccc--aaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||| |||||||||    
T  6822893 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgcca 6822834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18839611 - 18839531
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcat-gtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||  |||||||||||||||||||||| |||||| |||| ||||||  | |||||| ||||||||||||||||||||    
T  18839611 ttgttgcctatctaaacccttgtttcagccccctctatc-tcatggtttacaataatacaatgtctatatttatagtaaaag 18839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 24325636 - 24325575
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||| |||||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  24325636 gtttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 50248841 - 50248909
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| |||||||||| || |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  50248841 taaacctttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 46783029 - 46782960
Alignment:
Q  51 tctgatacaaggtctatatt---tatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaa 117  Q
    ||||||||||||| ||||||   ||||||||||||| | ||||||||||||||||||| ||||| |||||    
T  46783029 tctgatacaaggtttatattatttatagtaaaagtaacccttaaaatttggaacaaatatgcacttaaaa 46782960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 49959018 - 49958963
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 106  Q
    ||||||||||||||||||||||||| ||||| ||| |  |||||||||||||||||    
T  49959018 tctgatacaaggtctatatttatagcaaaagcatcccacaaaatttggaacaaatc 49958963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6756551 - 6756469
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||| |||||||||||| ||| ||||| |  | |||||| | ||||||| |||||||||||||| |||||||    
T  6756551 ttgttgcctttctaagcccttgtttcagtcccctctatttcaaggtttacaccgatacaatgtctatatttatagcaaaagta 6756469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 27916469 - 27916415
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    |||||||| |||||||||||||||||||||||| ||  ||| |||||||||||||    
T  27916469 tgatacaatgtctatatttatagtaaaagtatccctccaaaattggaacaaatct 27916415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 46432036 - 46432090
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  46432036 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 46432090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 2401492 - 2401565
Alignment:
Q  51 tctgatacaaggtctatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgt 123  Q
    ||||||||||||  ||||||||||||  |||||||| |||||||| |||||||||||| |||  ||||||||||    
T  2401492 tctgatacaaggcttatatttatagtggaaagtatcccttaaaatatggaacaaatcttcactgaaaaatacgt 2401565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 50307807 - 50307884
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||| |||||||||||| |||||||||| | |||||  | ||||||| |||||||| |  |||||||||||||||||    
T  50307807 ttgcctttctaaacccttttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaag 50307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 8349314 - 8349414
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    ||||||||||||||||||||||  |||||||  | |||| | ||| ||||||| |||||||||||| ||||| |||| || | ||| |||||||||||||    
T  8349314 ttctaaacccttgtttcagccctctctatctcaaggtttgcatctaatacaagatctatatttataataaaattatccctcataaaattggaacaaatct 8349413  T
Q  108 g 108  Q
    |    
T  8349414 g 8349414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17324089 - 17324009
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||| ||| |||| ||||||||||| |||||  |||||||  | ||||||||| |||||| ||||||||||||| ||||||    
T  17324089 ttgtggcctttctgaacccttgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaag 17324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 23783523 - 23783467
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  23783523 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23783467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4131636 - 4131675
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  4131636 ttgttgccattctaaatccttgtttcagccccctctatct 4131675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 15669669 - 15669732
Alignment:
Q  23 tttcagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||| ||||||   |||||||| |||| |||||||||| |||||||||||||||||||    
T  15669669 tttcagccccctctatcccaatgtttacatctgctacaaggtctgtatttatagtaaaagtatc 15669732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 16231458 - 16231400
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||| |||||||  |||||| |||||||| |||||||||    
T  16231458 ccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctcc-atcgtgcca 16231400  T

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Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 15295149 - 15295183
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||| ||||||||||||||||||||||||||||||    
T  15295149 gtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40133968 - 40133856
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccctt-------ctatct-tcatg-tttactctgatacaaggtctatatttatagtaaaagtatcgcttaa 91  Q
    |||||| |||||||||||||||||||||||||||       |||| | ||| | ||||||||||||||| | |||||||||||||||||| ||| || |     
T  40133968 ttgttgtcattctaaacccttgtttcagcccctttcagcccctatatctcaagatttactctgatacaaagcctatatttatagtaaaagaatccctcat 40133869  T
Q  92 aatttggaacaaa 104  Q
    || ||||||||||    
T  40133868 aaattggaacaaa 40133856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 2393578 - 2393651
Alignment:
Q  51 tctgatacaaggtctatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgt 123  Q
    ||||||||||||  ||||||||||||  ||| |||| |||||||| |||||||||||| |||  ||||||||||    
T  2393578 tctgatacaaggcttatatttatagtggaaaatatcccttaaaatatggaacaaatcttcactgaaaaatacgt 2393651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 13127895 - 13127959
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatag 75  Q
    |||||||||||||||||| ||||| || |||  | |||||||| |||||||||| |||||||||||    
T  13127895 ttctaaacccttgtttcaacccct-ctctctaaaggtttactccgatacaaggtttatatttatag 13127959  T

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Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 26979832 - 26979885
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    ||||||||||||||| |||||||| |||||| ||| || |||| ||||||||||    
T  26979832 tctgatacaaggtctttatttataataaaagcatccctaaaaaattggaacaaa 26979885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 16431081 - 16431017
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 108  Q
    |||| |||||||||||   |||||||||||||||||||||| || | ||| ||||||||||||||    
T  16431081 gtttgctctgatacaaaacctatatttatagtaaaagtatccctcataaaattggaacaaatctg 16431017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 49687400 - 49687360
Alignment:
Q  186 tccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||| |||||| ||||||||||||||||||| ||||||    
T  49687400 tccagtgacttgcctcaaaactgaaacctccaattgtgcca 49687360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 14807831 - 14807610
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14807831 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 14807732  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| || ||||||||| |||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||     
T  14807731 caaatctgca-ctcaaaatacgtttatgtttttcgctgccagcgcaccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct 14807633  T
Q  201 caaaactgaaacctccaatcgtg 223  Q
    ||||  |||||||||||||||||    
T  14807632 caaacttgaaacctccaatcgtg 14807610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 15068061 - 15067834
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||  | |||||   ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15068061 ttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaa 15067962  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | ||||||||| ||||||||||||||| ||||||| ||||| ||||||||| || ||||||||||||| |||||      
T  15067961 caaatctgcacccaaaaatacgtttttgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcatgatttttccagtggcttgctt 15067862  T
Q  201 caaaactgaaacctccaatcgtgccatg 228  Q
    ||||||||||||||||||||||||||||    
T  15067861 caaaactgaaacctccaatcgtgccatg 15067834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15072790 - 15072568
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15072790 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 15072691  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||| |||||| |||||||||| | ||||||||| ||||||||||||||| ||||||| ||||| ||||||||| ||||||||||| |||| |||||      
T  15072690 caaatttgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttgctt 15072591  T
Q  201 caaaactgaaacctccaatcgtg 223  Q
    |||||||||||||||||||||||    
T  15072590 caaaactgaaacctccaatcgtg 15072568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 27827066 - 27826841
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27827066 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaa 27826967  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc-c 199  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||      
T  27826966 caaatctgcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgctt 27826867  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
    | |||| |||||||||| |||||||||    
T  27826866 caaaaaatgaaacctcc-atcgtgcca 27826841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 27829377 - 27829152
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27829377 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaa 27829278  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc- 199  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||     
T  27829277 caaatctgcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcct 27829178  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
    | |||| |||||||||| |||||||||    
T  27829177 caaaaaatgaaacctcc-atcgtgcca 27829152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 12517279 - 12517506
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||  |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  12517279 ttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttgg 12517378  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    ||||||| |||||  ||||||| || | |||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  12517379 aacaaatttgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattgc 12517478  T
Q  199 cccaaaactgaaacctccaatcgtgcca 226  Q
    | ||||||||||||||||||||||||||    
T  12517479 ctcaaaactgaaacctccaatcgtgcca 12517506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 28251822 - 28252002
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    ||||||||||||||||||||||||||| |||  |||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28251822 ttgttgccattctaaacccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 28251921  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgat 182  Q
    |||||||||| || ||||||||| | |||| |||| ||||| ||||||||| | ||||||||||| ||||||||||||||||    
T  28251922 caaatctgca-ctcaaaatacgtttctgtttttcgctgccaacgcaccatcgtaccacgatgcgatcccatcgtgccacgat 28252002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4424098 - 4423938
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||| ||||||||||||||| |||||||  | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4424098 ttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaa 4423999  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||  ||||||| || | | || |||| ||||||||||||||| |||||||||    
T  4423998 caaatctgcactcaaaaatatgtttctatttttcgctgccagcgcaccatcgtgccacgat 4423938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 2468362 - 2468511
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||| |||||||||||| || |||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2468362 ttctaaatccttgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgc 2468461  T
Q  110 acctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacg 159  Q
    ||  |||||||||| | |||||||||   ||||||||||||| |||||||    
T  2468462 actaaaaaatacgtttctgttattcgcatccagcgcaccatcgtgccacg 2468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3886173 - 3886336
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3886173 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaa 3886272  T
Q  101 caaatctgcacc---taaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||| ||||||    ||||||| || | ||||||||| ||||||| ||||||| | |||||||    
T  3886273 caaatatgcacccaaaaaaaatatgtttctgttattcgctgccagcacaccatcgtaccacgat 3886336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 44720816 - 44720677
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    ||||||||| || |||||||||||||| ||||||| || | |||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44720816 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttt-gctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 44720718  T
Q  186 tccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||| ||||||| |||||||||||||||||| |||||||    
T  44720717 tccagtaccttgcctcaaaactgaaacctccaaacgtgcca 44720677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18810788 - 18810680
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| |||||||||||| |||||||||||||||||||| || ||||||||||| ||    
T  18810788 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaa 18810689  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  18810688 caaatctgc 18810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18812973 - 18812865
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||| | ||||||| || |||| |||||||||||| |||||||||||||||||||| || ||||||||||| ||    
T  18812973 ttgttgcctttctaaacccttgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaa 18812874  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  18812873 caaatctgc 18812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44720923 - 44720815
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| || ||||| |||||||||||||||||||||||| | ||||||||| || ||    
T  44720923 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaatctgtaa 44720824  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  44720823 caaatctgc 44720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13858739 - 13858842
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||| |||| |||||||  | |||||||||||||||| |||||||||||||||||||||||| || | || ||||||    
T  13858739 ttgttgcctttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaattggaa 13858838  T
Q  101 caaa 104  Q
    ||||    
T  13858839 caaa 13858842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14419446 - 14419549
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| |||||||||||||||||||||||| || | || ||||||    
T  14419446 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcactcataaattggaa 14419545  T
Q  101 caaa 104  Q
    ||||    
T  14419546 caaa 14419549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 18812815 - 18812754
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18812815 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 18812754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33541643 - 33541723
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||||||    
T  33541643 ttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaag 33541723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 181617 - 181534
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||||| |||||||||||||||| |||||||  | ||||| |||||||||| |||||||||||||||||||||||    
T  181617 ttgttgccattctaagcccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagtat 181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41382753 - 41382670
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| |||||||||||||||||| |||||| |||||||  | |||||||||||| |||||||||||||||||||||||||||    
T  41382753 ttgttgtcattctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaagtat 41382670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 43079494 - 43079406
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  43079494 gccagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 43079406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 43081869 - 43081781
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  43081869 gccagcgtaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 43081781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35872633 - 35872713
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  35872633 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 35872713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36865618 - 36865538
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||||||||||||||||||| |||||||| | |||||| |||||||||| |||||||||||||||||||    
T  36865618 ttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41384824 - 41384742
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| |||||||||||||||||||||||||| ||||||  || |||||| |||| |||||||||||||||||||||||||||    
T  41384824 ttgttgtcattctaaacccttgtttcagcccct-ctatctcaatttttactttgattcaaggtctatatttatagtaaaagtat 41384742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26775281 - 26775199
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||| | ||||||||||||||||||||    
T  26775281 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagta 26775199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 17847558 - 17847501
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 108  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  17847558 tctgatacaaggtctatatttatagtaaaagtatccctcaaaatttggaacaaatctg 17847501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27107152 - 27107232
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||  ||||||||| ||||||||||||||||||||    
T  27107152 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 27107232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30480758 - 30480838
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||||||||| ||||||||||||  | |||||| || |||||| ||||||||||||||||||||    
T  30480758 ttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 30480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5622993 - 5623096
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||| ||||||||||   |||||||||||||||||| ||| || | || ||||||    
T  5622993 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaatcactcataaattggaa 5623092  T
Q  101 caaa 104  Q
    ||||    
T  5623093 caaa 5623096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28283474 - 28283585
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-----atgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||||||||||||||||||||||||||| ||||||| ||     | |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  28283474 ttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 28283573  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  28283574 tttggaacaaat 28283585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32339389 - 32339280
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  32339389 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 32339290  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  32339289 tggaacaaat 32339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1225246 - 1225164
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||| | ||||||||||||||||||||||| |||||||  | |||||| ||||||||| | ||||||||||||||||||||    
T  1225246 ttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaagta 1225164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 4423952 - 4423894
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  4423952 ccatcgtgccacgatttttccagtgccttgccttaaaactgaaacctccaattgtgcca 4423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 18810630 - 18810569
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||||| |||||||||| |||||||||||||| | |||||||||||||||||||    
T  18810630 gccagcgcaccatcgtgccacgatgtgaccccatcgtgccgcaatttttccagtgccttgcc 18810569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43530208 - 43530121
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||  ||||||||||||||||||||||| |||||||   |||  |||| |||||||||||||||||||||||||||||||||||    
T  43530208 ttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 43530121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14477356 - 14477276
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||||||||| |||| |||||||  | |||| ||||||||||| | ||||||||||||||||||    
T  14477356 ttgttgcctttctaaacccttgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaag 14477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25952601 - 25952521
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||| |  |||||||||||||||||    
T  25952601 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaag 25952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15809299 - 15809190
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| | |||||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  15809299 ttgttgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 15809200  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  15809199 tggaacaaat 15809190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24873436 - 24873547
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-----tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| ||||||||||||||||||||||| |||||||     |||  |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  24873436 ttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 24873535  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  24873536 tttggaacaaat 24873547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 6376027 - 6375985
Alignment:
Q  43 atgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6376027 atgtttactctgatacaaggtctatatttatagtaaaagtatc 6375985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 15185974 - 15186072
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    ||||||||||||||||||| | | | |||||  | |||||||||||||||| || ||||||||||||||||||||| || | ||| |||||||||||||    
T  15185974 ttctaaacccttgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 15186072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 21482393 - 21482297
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||| ||  |||||||  | ||||||||||||||||  ||||||||||||||||||| ||| || ||||  ||||||||||||    
T  21482393 ttctaaacccttgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaagaatc-ctaaaaaactggaacaaatct 21482297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5372433 - 5372512
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  |  ||||| ||||||||| ||||||| ||||||||||||    
T  5372433 ttgttgcctttctaaacccttgtttcagcccc-tctatctcaagatttacactgatacaatgtctataattatagtaaaag 5372512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27911094 - 27911011
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||  |||||||| ||| |||||||| |||||||||||    
T  27911094 ttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatc 27911011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27957513 - 27957430
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||  |||||||| ||| |||||||| |||||||||||    
T  27957513 ttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatc 27957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 28252008 - 28252063
Alignment:
Q  167 cccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgt 222  Q
    ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  28252008 cccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgt 28252063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 31035097 - 31035027
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacg 122  Q
    |||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||  || |||||||||    
T  31035097 tctgatacaaggtctatatttatagtaaaaatatc-ctaaaaaattggaacaaatctgagcccaaaaatacg 31035027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 31162249 - 31162186
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    ||||||| ||||||||||||||||||||||||||||||||| || | ||| |||||||||||||    
T  31162249 gtttactatgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaatct 31162186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3874090 - 3873981
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||| | |||||||||||||||||||||||  ||||||   |||  |||||  ||||||||| |||||||||||||||||||||||  || | |||||    
T  3874090 ttgttgtctttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaagtctatatttatagtaaaagtataactcataaatt 3873991  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  3873990 tggaacaaat 3873981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 43081987 - 43081930
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  43081987 ctgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43081930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 43079614 - 43079558
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  43079614 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37214465 - 37214504
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  37214465 ttgttgcctttctaaacccttgtttcagccccctctatct 37214504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 22684965 - 22685003
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  22684965 gtttgctctgatacaaggtctatatttatagtgaaagta 22685003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 31574054 - 31574100
Alignment:
Q  56 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    ||||||||||||||||||||||||||  || || |||||||||||||||    
T  31574054 tacaaggtctatatttatagtaaaag--tctctcaaaatttggaacaaa 31574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 8995538 - 8995314
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8995538 ttgttgcctttctaaacccttgttttagccccctctatctctca-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttgga 8995440  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||| |||| ||||| | ||||||| | || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  8995439 acaaatctgcacccaaaa-tacgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcc 8995341  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
    | |||||||||||||||||||||||||    
T  8995340 caaaaactgaaacctccaatcgtgcca 8995314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9019985 - 9019761
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9019985 ttgttgcctttctaaacccttgttttagccccctctatctctca-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttgga 9019887  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||| |||| ||||| | ||||||| | || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  9019886 acaaatctgcacccaaaa-tacgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcc 9019788  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
    | |||||||||||||||||||||||||    
T  9019787 caaaaactgaaacctccaatcgtgcca 9019761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11983284 - 11983499
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||| || ||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  11983284 ttgttgcctttctaagcctttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaa 11983383  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||     
T  11983384 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg-cttacct 11983482  T
Q  201 caaaactgaaacctcca 217  Q
    || ||||||||||||||    
T  11983483 cacaactgaaacctcca 11983499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 19227663 - 19227881
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||| |||||| | |||||  | |||| |||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  19227663 ttgttgcctttctaaacccttgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaa 19227762  T
Q  101 caaatctgca-cctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||| || ||||||| || | |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19227763 caaatctgcacccaaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 19227862  T
Q  200 -ccaaaactgaaacctcca 217  Q
     | |||| |||||||||||    
T  19227863 tcaaaaattgaaacctcca 19227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 15530377 - 15530602
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    ||||||||||||||| |||||| ||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15530377 ttgttgccattctaagcccttgcttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 15530476  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||| ||||||| ||||||| || | | | ||||  ||||||| ||||||| |||||||||||| ||||||||| |||||| ||||| ||||| |||||     
T  15530477 caaacctgcacccaaaaatatgtttctataattcactgccagcacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttgcct 15530576  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||  ||||||||||||| ||||||    
T  15530577 caaacttgaaacctccaattgtgcca 15530602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 14507430 - 14507626
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||| |||||| |||||||  | |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14507430 ttgttgcctttctaaacccttgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 14507529  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttg 197  Q
    ||||||| |||  ||||||| || | |||| |||| || |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  14507530 caaatctacactcaaaaatatgtttctgtttttcgctggcagcgcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttg 14507626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 30729098 - 30729281
Alignment:
Q  16 acccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaa 115  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  30729098 acccttgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcacccaa 30729197  T
Q  116 aaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||| | ||||||||| ||||||||||| ||| ||||||| || |||||||||||| |||||  ||||||||| ||||||    
T  30729198 aaatacgtttctgttattcgctgccagcgcactatcgtgccacgttgtgaccccatcgtggcacgaaatttccagtgacttgcc 30729281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 1072132 - 1072291
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||| ||||||||||  | |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  1072132 ttgttgcctttctaaacccttgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaa 1072231  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||||||| |||||||||| ||||||||||| ||||  || |||||| ||||||||    
T  1072232 caaatctgcacccaaaaatacgtttatgttattcgctgcctacgtaccatcgtgccacga 1072291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 15541398 - 15541586
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaa 103  Q
    ||||| ||||||||||||||||||||||| |||||||  | ||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  15541398 ttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaa 15541497  T
Q  104 atctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtg 192  Q
    ||||||||||||||||| || | || |||||| |||||||| |||||| ||||||| ||||| | ||||||| || ||  |||||||||    
T  15541498 atctgcacctaaaaatatgtttctgctattcgctgccagcgtaccatcgtgccacgttgcgatctcatcgtggcatgaaatttccagtg 15541586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 32280055 - 32279897
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| || ||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32280055 ttgttgcctttttaaacccttgtttcagcccct-ctatctccaagtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaa 32279957  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||||||  |||||||| | |||||||||||  |||||||||||||| ||||||||    
T  32279956 caaatctgcactcaaaaatacatttatgttattcgccgccagcgcaccatcgtgccacga 32279897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15532936 - 15533134
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    ||||| || ||||||||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  15532936 ttgttacctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaa 15533035  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||||||||||| || | | ||||| | | ||||||||||||  || |||| ||||| | ||||||| ||| |  ||||||||| ||||||    
T  15533036 caaatctgcacctaaaaatatgtttctcttatttgctaccagcgcaccattgtgacacgttgcgatctcatcgtggcacaaaatttccagtgacttgcc 15533134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 4816612 - 4816747
Alignment:
Q  90 aaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttcca 189  Q
    ||||| || |||||||||||||| ||||||| || | |||| || | | ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  4816612 aaaatctgtaacaaatctgcaccaaaaaatatgtttctgttttt-gctaccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 4816710  T
Q  190 gtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    || ||||||| ||||||||||||||||||||||||||    
T  4816711 gtaccttgcctcaaaactgaaacctccaatcgtgcca 4816747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 33308832 - 33308744
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  33308832 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 33308744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 33311101 - 33311013
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  33311101 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 33311013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 29755132 - 29755212
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  29755132 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 29755212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 26068735 - 26068815
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  26068735 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 26068815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17852601 - 17852518
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||||||||||||||||||| |||||||  | |||||||||||| ||| |||||||||||||||||||||||    
T  17852601 ttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagtat 17852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28241576 - 28241658
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  28241576 ttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagta 28241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12195770 - 12195875
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttgga 99  Q
    |||||||  ||||||||||||||||||||||| |||||||  | |||| || ||||||||||||||||||||||||||||||||  || | |||||||||    
T  12195770 ttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttgga 12195869  T
Q  100 acaaat 105  Q
    ||||||    
T  12195870 acaaat 12195875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20915611 - 20915721
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttg 97  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  ||||  ||||||||||||||||||||||||||||||| | ||||||||| ||    
T  20915611 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaa-tttagcctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctg 20915709  T
Q  98 gaacaaatctgc 109  Q
     |||||||||||    
T  20915710 taacaaatctgc 20915721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 26066464 - 26066552
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaa-aactgaaacctccaatcgtgcca 226  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||| || |||| |||||||| |||||||||    
T  26066464 gccagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaataactaaaacctcc-atcgtgcca 26066552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3390438 - 3390354
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||  ||||||||| ||||||||||||||||||||||||    
T  3390438 ttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagtatc 3390354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24338703 - 24338783
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  24338703 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32447571 - 32447651
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||| | ||||||||||||||||||    
T  32447571 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaag 32447651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 15346442 - 15346347
Alignment:
Q  9 attctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    |||||||||||||| ||||||||| |||||||  | |||||| ||||||||| |||||||||||||||||||||||| || | || ||||||||||    
T  15346442 attctaaacccttggttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaa 15346347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 13057250 - 13057173
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  13057250 ttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 13057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 12186331 - 12186431
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatcttcatgtttac-tctgatacaaggtctatatttatagtaaaagt-atcgcttaaaatttggaacaaatc 106  Q
    |||||||||||||||| |||||||||||||||  | |||||| | ||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||    
T  12186331 ttctaaacccttgttttcagccccttctatctcaaggtttacatgtgatacaaggtttatatttatagtaaaagtaatcgctaaaaaattggaacaaatc 12186430  T
Q  107 t 107  Q
    |    
T  12186431 t 12186431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25477333 - 25477253
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||| ||||||||    
T  25477333 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 25477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14459020 - 14459093
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttata 74  Q
    |||||||| |||||||||||| |||||||||| |||||||  | |||| |||||||||||||||||||||||||    
T  14459020 ttgttgcctttctaaacccttatttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3233986 - 3234065
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||| ||||||||||||||| |||||||| | |||||| ||||||||| ||||||||||||||||||||    
T  3233986 ttgttgtctttctaaatccttgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaag 3234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 24192630 - 24192733
Alignment:
Q  81 gtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacg 180  Q
    |||| |||||||||||||||||||| |||||  ||||||| || | ||||||||| ||||||||| ||||| ||||||  ||| | ||||||||| ||||    
T  24192630 gtattgcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcatgccacattgcaatcccatcgtggcacg 24192729  T
Q  181 attt 184  Q
    ||||    
T  24192730 attt 24192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1230504 - 1230586
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||||||||| |||  |||||||  | |||| || |||||||||||||||||||||||| ||||||    
T  1230504 ttgttgcctttctaaacccttgtttcaaccctctctatctcaaagtttgctatgatacaaggtctatatttatagtgaaagta 1230586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3632193 - 3632271
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||||| |||||||||||||||||| | || |||||||  | |||||| ||||||||| ||||||||||||||||||    
T  3632193 ttgttgcctttctaaacccttgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaa 3632271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 3028117 - 3028189
Alignment:
Q  14 aaacccttgttt-cagccccttctatcttcatg-tttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||| ||||||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  3028117 aaacccttgttttcagccccttttatct-catggtttactttgatacaaggtctatatttatagtaaaagtatc 3028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 4816551 - 4816608
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  4816551 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 4816608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 30034858 - 30034967
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct----tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| |||||||||||||||| ||| || |||||||    | | |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  30034858 ttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 30034957  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  30034958 tggaacaaat 30034967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 24191533 - 24191636
Alignment:
Q  81 gtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacg 180  Q
    |||| |||||||||||||||||||| |||||  ||||||| || | ||||||||| ||||||||| ||||| | ||||  ||| | ||||||||| ||||    
T  24191533 gtattgcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcataccacattgcaatcccatcgtggcacg 24191632  T
Q  181 attt 184  Q
    ||||    
T  24191633 attt 24191636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2629140 - 2629250
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct-----tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaat 94  Q
    |||||||| ||||||||||||||||||||||||     ||| |||  | |||||   ||||||||||||||||||||||||||||||||  || | ||||    
T  2629140 ttgttgcctttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagtataactaataaat 2629239  T
Q  95 ttggaacaaat 105  Q
    |||||||||||    
T  2629240 ttggaacaaat 2629250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 13039810 - 13039733
Alignment:
Q  4 ttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||| ||||||||||||||||||||| | | |||||  | |||||| |||||||||  |||||||||||||||||||    
T  13039810 ttgcctttctaaacccttgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaag 13039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 16455723 - 16455800
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacg 122  Q
    |||||| | |||||||||| ||||||||||||||| ||||| || |||| ||||||||||||||  || |||||||||    
T  16455723 gtttacaccgatacaaggtatatatttatagtaaaggtatccctgaaaaattggaacaaatctgagcccaaaaatacg 16455800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3630119 - 3630199
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||  |||||||||||| |||||||  |  |||||  |||||||| ||||||||||||||||||||    
T  3630119 ttgttgcctttctaaaccgatgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaag 3630199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12161810 - 12161889
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||  ||||||||||||||||||||||||| |||||  | ||||||  |||||||| ||||||||||| ||||||||    
T  12161810 ttgttgcatttctaaacccttgtttcagcccctt-tatctcaaggtttacaatgatacaatgtctatatttaaagtaaaag 12161889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 26068606 - 26068662
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  26068606 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 26068662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26065045 - 26065006
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  26065045 ttgttgccattctaaacccttgtttcagccccctctatct 26065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26085014 - 26084975
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  26085014 ttgttgccattctaaacccttgtttcagccccctctatct 26084975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30967260 - 30967152
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||| | ||||||||||||||||||||||| |||||||   |||  |||||  || ||||||||||||||||||||||||||||||  || | |||||    
T  30967260 ttgttgtctttctaaacccttgtttcagccccctctatctctctcaaagtttagcct-atacaaggtctatatttatagtaaaagtataactcataaatt 30967162  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  30967161 tggaacaaat 30967152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 12937458 - 12937559
Alignment:
Q  10 ttctaaacccttgtttcagcccct-tctatcttcatgtttac-tctgatacaaggtctata--tttatagtaaaagtatcgcttaaaatttggaacaaat 105  Q
    |||||||||||  ||||||||||| | |||||  | |||||| |||||||||| |||||||  ||||||||||||||||| || ||||||||||| ||||    
T  12937458 ttctaaaccctgttttcagcccctctgtatctcaaggtttacatctgatacaatgtctatatatttatagtaaaagtatccctaaaaatttggaataaat 12937557  T
Q  106 ct 107  Q
    ||    
T  12937558 ct 12937559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 26066335 - 26066389
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||||||||||||||   ||||||||| || |||||||||    
T  26066335 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 26066389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 32279910 - 32279852
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||| | |||||| || ||||||||| |||||||||||||    
T  32279910 ccatcgtgccacgacttttccagcgacttgcctcagaactgaaacatccaatcgtgcca 32279852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13870677 - 13870749
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttata 74  Q
    |||||||| |||||||||||| |||||||||| |||||||  | |||| ||||||||||| | |||||||||||    
T  13870677 ttgttgcctttctaaacccttatttcagcccc-tctatctcaaggtttgctctgatacaaagcctatatttata 13870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 15367045 - 15366992
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    |||||||||| |||||||||||||||||||||||| || | || ||||||||||    
T  15367045 tctgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaa 15366992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 19696446 - 19696394
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||||||||||| |||  | |||| |||||||||||||    
T  19696446 atacaaggtctatatttatagtaaaagaatccttcaaaaattggaacaaatct 19696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 29755003 - 29755059
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  29755003 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 29755059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 33308961 - 33308905
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  33308961 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33308905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 33311230 - 33311174
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  33311230 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33311174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4816486 - 4816525
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  4816486 ttgttgcctttctaaacccttgtttcagccccctctatct 4816525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 22490685 - 22490618
Alignment:
Q  14 aaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||||| |||||||  | |||||| || || ||| |||||||||||| |||||||    
T  22490685 aaacccttgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaag 22490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 12911770 - 12911812
Alignment:
Q  65 tatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  12911770 tatatttatagtaaaagtatccctaaaaatttggaataaatct 12911812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 17012095 - 17012029
Alignment:
Q  10 ttctaaacccttgt-ttcagccccttctatcttcatgtttactctgatacaaggtctatatttatag 75  Q
    |||||||||||| | ||||| ||| |||||||  | |||||||| ||||||||||||||||||||||    
T  17012095 ttctaaacccttttattcagacccctctatctcaaggtttactccgatacaaggtctatatttatag 17012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 28038003 - 28038065
Alignment:
Q  44 tgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||  |||||||| |||||||||||||||||||||||| || | ||| |||||||||||    
T  28038003 tgtttacgttgatacaatgtctatatttatagtaaaagtatccctcataaaattggaacaaat 28038065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 26084867 - 26084818
Alignment:
Q  143 cgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtg 192  Q
    ||||||||| |||||||||||||  | |||||| ||||||||||||||||    
T  26084867 cgcaccatcgtgccacgatgcgattcaatcgtggcacgatttttccagtg 26084818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 11138318 - 11138278
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||||||||||||| | ||||| |||||||||||||||    
T  11138318 gtttactctgatacaagatttatatctatagtaaaagtatc 11138278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 25466469 - 25466509
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||||||| | ||| |||||||||||||||||||||||    
T  25466469 gtttactctgacaaaagatctatatttatagtaaaagtatc 25466509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 90)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 38882130 - 38881904
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct-tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| |||||||||||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38882130 ttgttgcctttctaaacccttgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgga 38882031  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||| |||||||||| | |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38882030 acaaatctgcacccaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 38881931  T
Q  200 -ccaaaactgaaacctccaatcgtgcca 226  Q
     | |||||| |||||||| |||||||||    
T  38881930 tcaaaaactaaaacctcc-atcgtgcca 38881904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 4236653 - 4236429
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||| |||||||||||||| | ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4236653 ttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 4236554  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||| || ||||||||| | |||| |||  ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||     
T  4236553 caaatctgca-ctcaaaatacgtttctgtttttccctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttgcct 4236455  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
     |||||||||||||||||||||||||    
T  4236454 taaaactgaaacctccaatcgtgcca 4236429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16776182 - 16775959
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatattt-atagtaaaagtatcgcttaaaatttgga 99  Q
    |||||||| || |||||||||||||||||||| |||||||  | |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  16776182 ttgttgcctttgtaaacccttgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttgga 16776083  T
Q  100 acaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||| |||  ||||||| || | |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  16776082 acaaatcttcactcaaaaatatgtttctgtttttcgatgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcc 16775983  T
Q  200 ccaaaactgaaacctccaatcgtg 223  Q
     ||||  |||||||||||||||||    
T  16775982 tcaaacttgaaacctccaatcgtg 16775959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 21948050 - 21947832
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | |||||||||||||||||||||||| ||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21948050 ttgttgtctttctaaacccttgtttcagcccct-ctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 21947952  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| ||||||| || | ||||||||| |||||   ||||||| ||||||| ||| | ||||||||||||||     ||||||| ||| ||     
T  21947951 caaatctgcacccaaaaatatgtttctgttattcgctgcca---caccatcgtgccacgttgcaatcccatcgtgccacgtaaagtccagtgacttacct 21947855  T
Q  201 caaaactgaaacctccaatcgtg 223  Q
    |||||||||||||||||||||||    
T  21947854 caaaactgaaacctccaatcgtg 21947832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25921728 - 25921888
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||||||||||||||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25921728 ttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 25921827  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||| |||||||||| | ||||||||| || |||||||||||| |||||||||    
T  25921828 caaatctgcacccaaaaatacgtttctgttattcgctgtcagcgcaccatcgtgccacgat 25921888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20507717 - 20507940
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  20507717 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaa 20507816  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||||||||| || ||||||| || | ||||||||| ||| |||||||| || ||||| | ||| | |||||||||||||||    |||| || ||||||     
T  20507817 caaatctgctcccaaaaatatgtttctgttattcgctgctagcgcaccttcgtgccatgttgcaatcccatcgtgccacgaaaaatccaatgacttgcct 20507916  T
Q  201 caaaactgaaacctccaatcgtgc 224  Q
    ||||||| ||||||||||||||||    
T  20507917 caaaactaaaacctccaatcgtgc 20507940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 36402590 - 36402741
Alignment:
Q  8 cattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36402590 cattctaaacccttgtttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaagtatcgcttaaaattt-gaacaaatct 36402688  T
Q  108 gcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    ||||| |||||||||| | ||||||||||||||| ||||||||| ||||||||    
T  36402689 gcacccaaaaatacgtttctgttattcgttgccaacgcaccatcgtgccacga 36402741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 52 - 194
Target Start/End: Original strand, 21684767 - 21684909
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatc 151  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||  ||||||| || | |||| |||| |||||||||||||||    
T  21684767 ctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatc 21684866  T
Q  152 ctgccacgatgcgaccccatcgtgccacgatttttccagtgcc 194  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  21684867 gtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 21684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2818591 - 2818731
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    ||||| || ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2818591 ttgttacctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 2818690  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgcca 141  Q
    ||||||||||||  ||||||||| | ||||||||| |||||    
T  2818691 caaatctgcacccgaaaatacgtttttgttattcgctgcca 2818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2174943 - 2174783
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  2174943 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaa 2174844  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||  ||||||| || | |||| |||| |||||| |||||||| |||||||||    
T  2174843 caaatctgcactcaaaaatatgtttctgtttttcgctgccagtgcaccatcgtgccacgat 2174783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 12556178 - 12556337
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| |||||||||||||| |||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  12556178 ttgttgtcattctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaa 12556277  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
    |||||||| ||  |||||||| | | ||||||||| |||||||||| |||| ||||||||    
T  12556278 caaatctgtacacaaaaatacatttctgttattcgctgccagcgcatcatcgtgccacga 12556337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 31466245 - 31466389
Alignment:
Q  13 taaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacc 112  Q
    |||||| ||||||||||||||| |||||  | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31466245 taaacctttgtttcagccccttttatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcacc 31466344  T
Q  113 taaaaatacgtctatgttattcgttgccagcgcaccatcctgcca 157  Q
     |||||||| | |||| |||||  |||||| |||||||| |||||    
T  31466345 caaaaatacatttatggtattccctgccagtgcaccatcgtgcca 31466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6756518 - 6756359
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||| |||||||||| || |||||||  | ||||| | ||||||||| |||||||| |||||||||||||  ||||||||||||||    
T  6756518 ttgttgcctttctaaaccattgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaagtataacttaaaatttggaa 6756419  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacga 160  Q
     ||||||||||| |||||||||| | ||||||||| ||||||||||||||| ||||||||    
T  6756418 taaatctgcaccaaaaaatacgtttctgttattcgctgccagcgcaccatcgtgccacga 6756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 39798077 - 39797956
Alignment:
Q  36 tatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcg 135  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| || | |||||||||    
T  39798077 tatcttcaagtttactctaatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcg 39797978  T
Q  136 ttgccagcgcaccatcctgcca 157  Q
     ||||||||||||||| |||||    
T  39797977 ctgccagcgcaccatcgtgcca 39797956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31542759 - 31542651
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| || |||||||||||||||||||||||||||||| | ||||||||| || ||    
T  31542759 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaa 31542660  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  31542659 caaatctgc 31542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26098506 - 26098589
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||||||||||| |||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  26098506 ttgttgccattctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagtat 26098589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 10749652 - 10749572
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  10749652 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 10749572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 10757107 - 10757027
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  10757107 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 10757027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 15354918 - 15354998
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  15354918 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 15354998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 15357194 - 15357274
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  15357194 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 15357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31545104 - 31544996
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| | |||||  | |||| || |||||||||||||||||||||||||||||| | ||||||||| || ||    
T  31545104 ttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaa 31545005  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  31545004 caaatctgc 31544996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 34477485 - 34477546
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34477485 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 34477546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26097757 - 26097674
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||| || |||||||||| |||||||  | |||||||||||| |||||||||||||||||||||||||||    
T  26097757 ttgttgccattctaaacctttatttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaagtat 26097674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40221546 - 40221464
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||||||||||||||||||||||||||| |||||||  | |||||||||||  ||| ||||||||||||||||||||||    
T  40221546 ttgttgccattctaaacccttgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaagta 40221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 31179807 - 31179895
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||  |||||| |||||||| |||||||||    
T  31179807 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctcc-atcgtgcca 31179895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 31544997 - 31544857
Alignment:
Q  86 gcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttt 185  Q
    ||||||||| || || ||||||||||| ||||||| || | |||| ||    |||||||||||||| || | ||||| ||||||||||||||||||||||    
T  31544997 gcttaaaatctgtaataaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttt 31544898  T
Q  186 tccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||||  |||||| |||||||| |||||||||    
T  31544897 tccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 31544857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 31542628 - 31542501
Alignment:
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||||||||||| ||||||| || | |||| ||    |||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||    
T  31542628 aacaaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttgc 31542529  T
Q  199 cc-caaaactgaaacctccaatcgtgcca 226  Q
    ||  |||||| |||||||| |||||||||    
T  31542528 ccaaaaaactaaaacctcc-atcgtgcca 31542501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 23664981 - 23664914
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaa 205  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  23664981 gccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaa 23664914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 23667256 - 23667189
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaa 205  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  23667256 gccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaa 23667189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 23793606 - 23793673
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaa 205  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  23793606 gccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaa 23793673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10586866 - 10586758
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagcccct---tctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaattt 96  Q
    |||||||||||||||||||||||||||||||||   ||| |||  | |||||  |||||||||||||||||||||||||||||||||  || | ||||||    
T  10586866 ttgttgccattctaaacccttgtttcagcccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaattt 10586767  T
Q  97 ggaacaaat 105  Q
    |||||||||    
T  10586766 ggaacaaat 10586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39854507 - 39854426
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||||||||||||||| ||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  39854507 ttgttgcctttctaaacccttgtttcagcccct-ctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 39854426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 659853 - 659925
Alignment:
Q  153 tgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  659853 tgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcctc-aaactgaaacctccaatcgtgcca 659925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17072907 - 17072827
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  17072907 ttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 17072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25904127 - 25904047
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  25904127 ttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 25904047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31179626 - 31179734
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||| || |||||||  | |||| || |||||||| |||||||||||||||||||||   ||||||||| |  ||    
T  31179626 ttgttgcctttctaaacccttgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcctgcttaaaatctataa 31179725  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  31179726 caaatctgc 31179734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 36208596 - 36208524
Alignment:
Q  10 ttctaaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||||||||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||    
T  36208596 ttctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaag 36208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10529354 - 10529436
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||||||||| |||  |||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  10529354 ttgttgcctttctaaacccttgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 10529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4410085 - 4409999
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | |||| ||||||||||||||||||||||||||| ||||||    
T  4410085 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 4409999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18509573 - 18509652
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||| |||||||||||||||||||||||||| |||||| |||  ||||| |||||||||||||||||||||||||||||    
T  18509573 ttgttgtcattctaaacccttgtttcagcccct-ctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18511467 - 18511547
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-atgtttactctgatacaaggtctatatttatagtaaa 79  Q
    |||||| ||||||||||||||||||||||||| ||||||| || | ||||| |||||||||||||||||||||||| ||||    
T  18511467 ttgttgtcattctaaacccttgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatattaaa 18511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 18596656 - 18596588
Alignment:
Q  16 acccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||||||| ||||||   | |||||||||||| |||||||||||||||||||||||||||    
T  18596656 acccttgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaagtat 18596588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18466708 - 18466599
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc---atgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||   | |||||  ||||||||||||||||||||||||||||| |||  || | |||||    
T  18466708 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaaatataactcataaatt 18466609  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  18466608 tggaacaaat 18466599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18469035 - 18468926
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||||   ||||||||||||||||||||||||||||||||  || | |||||    
T  18469035 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagtataactcataaatt 18468936  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  18468935 tggaacaaat 18468926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 29748315 - 29748260
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 106  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  29748315 tctgatacaaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 29748260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 41585969 - 41586044
Alignment:
Q  9 attctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||||||||| | |||||  | ||||||||||||||||   |||||||||||||||||||||    
T  41585969 attctaaacccttgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaagtat 41586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 659829 - 659772
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcctc-aaactgaaacctccaatcgtgcca 659772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 6661446 - 6661512
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagt 76  Q
    |||||||||||||||||| |||  |||||||  | ||||||||||||||||||||||||||||||||    
T  6661446 ttctaaacccttgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttatagt 6661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6747330 - 6747246
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct--tcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||  ||||||||||||||||||||||| |||||||  |  | ||| ||||||||||||||||||||||||||| ||||||    
T  6747330 ttgttgcttttctaaacccttgtttcagccccctctatctctttctctttgctctgatacaaggtctatatttatagtgaaagta 6747246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10474578 - 10474655
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaa 78  Q
    |||||||| ||||||| ||||||||||||||| ||||| |  | |||||| ||||||||| |||||||||||||||||    
T  10474578 ttgttgcctttctaaatccttgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaa 10474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 34477378 - 34477435
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||||||||||||| |||||||||||||| ||||||||||| || |||||||||||    
T  34477378 ctgatacaaggtctatttttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 34477435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 34530921 - 34531050
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  |||||||| |||||||||||||| |||||||  | |||||||||||| ||| ||||||||||| |||||||| |||    ||||  |||||    
T  34530921 ttgttgcatttctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaagaatcctaaaaaaactggaa 34531020  T
Q  101 caaatctgcacctaaaaatacgtctatgtt 130  Q
    |||||||   ||| ||||||||| ||||||    
T  34531021 caaatctaggcctgaaaatacgtttatgtt 34531050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20043074 - 20042994
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||| |||||||||||||| |||||||  | |||| || |||||||| | ||||||||||||||||||    
T  20043074 ttgttgcctttctaaacacttgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaag 20042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24126880 - 24126800
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | |||||||| |||||||||||||| |||||||  | |||||| |||||| || ||||||||||||||||||||    
T  24126880 ttgttgtctttctaaactcttgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaag 24126800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31472868 - 31472948
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||||||| |||||| |||||||  | |||||| || |||||| ||| ||||||||||||||||    
T  31472868 ttgttgcctttctaaacccttgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaag 31472948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 37706037 - 37706117
Alignment:
Q  3 gttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||| ||||||||| || |||||||||| |||||||  | |||||| ||||||||| |||||||||||||| |||||||    
T  37706037 gttgcctttctaaacctttatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagta 37706117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1189864 - 1189949
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcatg-tttac-tctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||| |||||||||||||| |||||||   ||| | ||||| |||||||||||||||||||||||||||||||    
T  1189864 ttgttgcctttctaaactcttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaag 1189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27912560 - 27912449
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-----tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| |||||||||||||||||||| || |||||||     |||  |||||  |||||||||||||||||||||||||||||||||  || | |||    
T  27912560 ttgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 27912461  T
Q  94 tttggaacaaat 105  Q
    ||||||||||||    
T  27912460 tttggaacaaat 27912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25804049 - 25803935
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---------tcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta- 90  Q
    ||||||||||||||||||||||||| |||||| |||||||         |||  ||||  |||||||||||||||||||||||||||||||||  || |     
T  25804049 ttgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagcctgatacaaggtctatatttatagtaaaagtataactcat 25803950  T
Q  91 aaatttggaacaaat 105  Q
    |||||||||||||||    
T  25803949 aaatttggaacaaat 25803935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 2144897 - 2144954
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaa-atttggaacaaatct 107  Q
    ||||||||||||||||||||||||||||||||||| || ||| | |||||||||||||    
T  2144897 tctgatacaaggtctatatttatagtaaaagtatccctcaaataattggaacaaatct 2144954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 20045023 - 20044954
Alignment:
Q  12 ctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||||||| ||| |||  | |||| ||||||||||| | ||||||||||||||||||    
T  20045023 ctaaacccttgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21288788 - 21288715
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttata 74  Q
    ||||||| ||||||||||||| ||||| |||| |||||||  | ||||||||| || |||||||||||||||||    
T  21288788 ttgttgctattctaaacccttatttcaaccccctctatctcaaggtttactctaattcaaggtctatatttata 21288715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 25921874 - 25921933
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcccc--aaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||| |||||||||    
T  25921874 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgcca 25921933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 34479739 - 34479796
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||||||||||||| ||||||||||| || ||||||||||| || |||||||||||    
T  34479739 ctgatacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaatctgc 34479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 695913 - 695833
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| |||||||||||||||||| |||| | |||||  | |||||| || |||||| ||||||||| ||||||||||    
T  695913 ttgttgcctttctaaacccttgtttcatccccctttatctcaaggtttacactcatacaatgtctatattcatagtaaaag 695833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 2818729 - 2818789
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgccatg 228  Q
    ||||||||||||||    ||||||| |||||| ||||||||||||||||||||||||||||    
T  2818729 ccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccatg 2818789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39398248 - 39398327
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||||| | | ||||| || |||||||||||||||||    
T  39398248 ttgttgcctttctaaacccttgtttcagcccc-tctatctcaaggtttacaccggtacaatgtttatatttatagtaaaag 39398327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 2174797 - 2174739
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||    
T  2174797 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgcca 2174739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 15552208 - 15552154
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  15552208 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 15552154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17818745 - 17818826
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||| |||||||||||||| ||| |||  | |||||| ||||||||| |||||||||||||  |||||||    
T  17818745 ttgttgcctttctaaactcttgtttcagcccc-tctttctcaaggtttacactgatacaatgtctatatttataacaaaagta 17818826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 27910418 - 27910364
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  27910418 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 27910364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 38960487 - 38960537
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  38960487 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 38960537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 3373348 - 3373401
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    ||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  3373348 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 3373401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 10757236 - 10757180
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  10757236 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 10757180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 15354789 - 15354845
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  15354789 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 15354845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 15357065 - 15357121
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  15357065 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 15357121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 23665110 - 23665054
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  23665110 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23665054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 23793477 - 23793533
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  23793477 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23793533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 38960349 - 38960405
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  38960349 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 38960405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 42770785 - 42770690
Alignment:
Q  14 aaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 108  Q
    |||||||||||| ||| ||| |||||||  | |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  42770785 aaacccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 42770690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 18186489 - 18186528
Alignment:
Q  187 ccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  18186489 ccagtgacttgcctcaaaactgaaacctccaatcgtgcca 18186528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34477309 - 34477348
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  34477309 ttgttgcctttctaaacccttgtttcagccccctctatct 34477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34479674 - 34479713
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  34479674 ttgttgcctttctaaacccttgtttcagccccctctatct 34479713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Original strand, 34479855 - 34479886
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgcc 199  Q
    ||||||||||||||||||||||||||||||||    
T  34479855 ccatcgtgccacgatttttccagtgccttgcc 34479886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 6745036 - 6745003
Alignment:
Q  50 ctctgatacaaggtctatatttatagtaaaagta 83  Q
    ||||||||||||||||||||||||||| ||||||    
T  6745036 ctctgatacaaggtctatatttatagtgaaagta 6745003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 20504320 - 20504393
Alignment:
Q  153 tgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||| ||| | |||||||||||||||    |||| || |||||| ||||||| ||||||||||||||||||    
T  20504320 tgccacgttgcaatcccatcgtgccacgaaaaatccattgacttgcctcaaaactaaaacctccaatcgtgcca 20504393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 36402747 - 36402784
Alignment:
Q  187 ccagtgccttgccccaaaactgaaacctccaatcgtgc 224  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  36402747 ccagtgacttgcctcaaaactgaaacctccaatcgtgc 36402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 2723947 - 2723911
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  2723947 gtttacactgatacaatgtctatatttatagtaaaag 2723911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 12556342 - 12556382
Alignment:
Q  186 tccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||| |||||| ||||||||||||||||||| ||||||    
T  12556342 tccagtgacttgcctcaaaactgaaacctccaattgtgcca 12556382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 23667385 - 23667329
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    |||||||||||||||||||||||| |||||   ||||||||| |  |||||||||||    
T  23667385 tgatacaaggtctatatttatagttaaagtcatgcttaaaatctataacaaatctgc 23667329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21520948 - 21521175
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgg 98  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||  ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  21520948 ttgttgcctttctaaacccttgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaagtatcgcttaaattttgg 21521047  T
Q  99 aacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 198  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||| |||||    
T  21521048 aacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttgc 21521147  T
Q  199 cccaaaactgaaacctccaatcgtgcca 226  Q
      ||||||||||||||||||||||||||    
T  21521148 ttcaaaactgaaacctccaatcgtgcca 21521175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19504600 - 19504798
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  19504600 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaa 19504699  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||||||||||  || | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19504700 caaatctgcacctaaaaatgtgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 19504798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 27104799 - 27104574
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||| |||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27104799 ttgttgcctttctgaacccttgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaa 27104700  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc- 199  Q
    |||||||||||  ||||||| || |||||| |||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||     
T  27104699 caaatctgcactcaaaaatatgtttatgtttttccctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcct 27104600  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
    | ||||||||||||||| |||||||||    
T  27104599 caaaaactgaaacctcc-atcgtgcca 27104574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 42064515 - 42064294
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42064515 ttgttgcctttctaaacccttgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 42064416  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||||     
T  42064415 caaatctgcactaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttgcct 42064316  T
Q  201 caaaactgaaacctccaatcgt 222  Q
    ||||  ||||||||||| ||||    
T  42064315 caaacttgaaacctccagtcgt 42064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 24162467 - 24162693
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  24162467 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaa 24162566  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | |  ||||||  |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  24162567 caaatctgcacccaaaaatacgtttctaatattcgcagccagcgcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcct 24162666  T
Q  201 c--aaaactgaaacctccaatcgtgcca 226  Q
    |  ||||||||||||||| |||||||||    
T  24162667 caaaaaactgaaacctcc-atcgtgcca 24162693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19502266 - 19502491
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||| |||||||||||||| | ||||| || |||| ||||||||||||||||||||||||||||||| | || |||||||||||||     
T  19502266 ttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggat 19502365  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc- 199  Q
    |||||||||| | ||||||| || | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  19502366 caaatctgcaaccaaaaatatgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcct 19502465  T
Q  200 ccaaaactgaaacctccaatcgtgcca 226  Q
      ||||||||||||||| |||||||||    
T  19502466 aaaaaactgaaacctcc-atcgtgcca 19502491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 13910299 - 13910491
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  13910299 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaa 13910398  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgc 193  Q
    |||||||||||  ||||||| || | |||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  13910399 caaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgc 13910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 22407664 - 22407891
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||||||||||||||| || | |||||    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  22407664 ttgttgcctttctaaacccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaa 22407763  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | ||||||||| ||||| ||||||||| ||||||| || || ||||||||||||| |||||| || || ||||||     
T  22407764 caaatctgcacccaaaaatacgtttctgttattcgctgccaacgcaccatcgtgccacgttgtgatcccatcgtgccacaattttttcactgacttgcct 22407863  T
Q  201 caaaactgaaacctccaatcgtgccatg 228  Q
    |||||||||||| |||||||||||||||    
T  22407864 caaaactgaaacatccaatcgtgccatg 22407891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6259070 - 6259295
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| |||||||| ||||||||| || | |||||||  | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6259070 ttgttgcctttctaaactcttgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 6259169  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    ||| |||||||| ||||||| || | ||||||||   |||||||||||||| || |||| ||||| |||||||||||||||||||||||||| ||| ||     
T  6259170 caagtctgcacccaaaaatatgtttctgttattcaccgccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactttcct 6259269  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||| |||||| ||||||    
T  6259270 caaaactgaaacatccaatagtgcca 6259295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 40032313 - 40032527
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40032313 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaa 40032412  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| |||||||||| | ||||||||| ||||||||||||||| |           | |||||||||||||||    ||||||| |||| |     
T  40032413 caaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcgt-----------atcccatcgtgccacgaaaaatccagtgacttgtct 40032501  T
Q  201 caaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||||    
T  40032502 caaaactgaaacctccaatcgtgcca 40032527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43623823 - 43623982
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||| |||||||| |||| ||||||| |  ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  43623823 ttgttgcctttctaaaccattgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaa 43623922  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    ||||||||||||  ||||||||| ||||||||| | ||||||||||||||| |||||||||    
T  43623923 caaatctgcacc-caaaatacgtttatgttatttgctgccagcgcaccatcgtgccacgat 43623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22287591 - 22287764
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| | |||||  | ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  22287591 ttgttgcctttctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 22287690  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgt 174  Q
    ||||| |||||| ||| |||| | | ||||||||| ||||||||||||||  ||||||| | ||| ||||||||    
T  22287691 caaatatgcacccaaacatacatttttgttattcgctgccagcgcaccatggtgccacgttacgatcccatcgt 22287764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6264400 - 6264560
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||| ||||||||||||| |||||||  | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6264400 ttgttgcctttctaaacctttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaa 6264499  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgat 161  Q
    |||||||||||| ||||||| || | |||||||||  || |  |||||||| |||||||||    
T  6264500 caaatctgcacccaaaaatatgtttctgttattcgccgctaatgcaccatcgtgccacgat 6264560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 18800566 - 18800676
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18800566 ttctaaacccttgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgc 18800665  T
Q  110 acctaaaaata 120  Q
    || ||||||||    
T  18800666 acttaaaaata 18800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 35107256 - 35107110
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcg 144  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||  |||||||||||    |||||    
T  35107256 gtttactatgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgcattgaaaaatacgattatgttattcgccttcagcg 35107157  T
Q  145 caccatcctgccacgatgcgaccccatcgtgccacgatttttccagt 191  Q
    |||||   || |||| | ||| ||||||||| |||| ||||||||||    
T  35107156 caccaatgtgacacgttacgatcccatcgtgacacgttttttccagt 35107110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 36559211 - 36559291
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  36559211 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 36559291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 42452783 - 42452678
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttgga 99  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||| ||||||||||| ||||||||||||| |||||||||  || | |||||||||    
T  42452783 ttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaagtataactcataaatttgga 42452684  T
Q  100 acaaat 105  Q
    ||||||    
T  42452683 acaaat 42452678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31733020 - 31733100
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  |||||||||||| ||||| ||||||||||||||||||||    
T  31733020 ttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaag 31733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 43623968 - 43624028
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgccatg 228  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctcaaaactgaaacctccaatcgtgccatg 43624028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28196637 - 28196534
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||| ||||||||||||| |||||||  |||||||||||||||||| |  ||||||||||||||||| ||| || | || ||||||    
T  28196637 ttgttgcctttctaaacctttgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaagaatccctcataaattggaa 28196538  T
Q  101 caaa 104  Q
    ||||    
T  28196537 caaa 28196534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 36561539 - 36561610
Alignment:
Q  147 ccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  36561539 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 36561610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 37963191 - 37963266
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||||||||||||||||||| |||||||  | ||||||||| |||||| ||||||||||||||||||||||||    
T  37963191 ttctaaacccttgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagtatc 37963266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 42923764 - 42923849
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-atgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||||||||||||||| | ||||||| || | ||||||| |||| |||||||||||||||||||||||||||    
T  42923764 ttgttgccattctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaagtat 42923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 12342673 - 12342797
Alignment:
Q  10 ttctaaaccctt-gtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 108  Q
    |||||||||||| ||||||||||| |||||||  | |||||||||||||||| || |||||||||||||||||||||    |||| ||||||||||||||    
T  12342673 ttctaaaccctttgtttcagccccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtatcctaaaaaaattggaacaaatctg 12342772  T
Q  109 cacctaaaaatacgtctatgttatt 133  Q
      || ||||||| |  |||||||||    
T  12342773 accccaaaaatatgattatgttatt 12342797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19007640 - 19007560
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||||| |||||||| | ||||||||||||||||||    
T  19007640 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaag 19007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22163202 - 22163282
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||||| ||||||| ||||||||||||||| |||||||  | |||||| ||||||||| ||||||||||||||||||||    
T  22163202 ttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaag 22163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 28462591 - 28462651
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac 111  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  28462591 tctgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 28462651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 45332528 - 45332608
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||  |||||| |||||||||    
T  45332528 gccagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttccttgcccaaaaaactaaaacctcca 45332608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 45156999 - 45156922
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgtt 130  Q
    ||||| ||||||||||||||||||||||| ||| || |||||||||||||||||  | ||||||||||||| ||||||    
T  45156999 tgatataaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatccacgcctaaaaatacgtttatgtt 45156922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 45280249 - 45280322
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    ||||||||||||||||||||||| |||||||  | |||| |||||||||||||| |||||||||||| ||||||    
T  45280249 ttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaagta 45280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 11578368 - 11578483
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag-tatcgcttaaaatttggaacaaatc-t 107  Q
    ||||||||||||||||||||||  |||||||  |  ||||| |||||| |||||||||||||||||||||||  ||| || |||| ||||||||||||      
T  11578368 ttctaaacccttgtttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaagcaatccctcaaaaattggaacaaatcag 11578467  T
Q  108 gcacctaaaaatacgt 123  Q
    || |||||||||||||    
T  11578468 gcccctaaaaatacgt 11578483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15539730 - 15539809
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||| |||||||||||||||||||| |||| | |||||  | |||||| ||||||||| |||||||||||||||||||    
T  15539730 ttgttgtcattctaaacccttgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaa 15539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 17849108 - 17849037
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||||||||||| |||||||  | |||||| ||||||||| || |||||||||||||||||    
T  17849108 ttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaag 17849037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23452492 - 23452601
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatt 95  Q
    |||||||| ||||||||||||||||||||||| ||| |||   |||  |||||  |||||||||||||||||||||||||||||||||  || | |||||    
T  23452492 ttgttgcctttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 23452591  T
Q  96 tggaacaaat 105  Q
    ||||||||||    
T  23452592 tggaacaaat 23452601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38020143 - 38020064
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 80  Q
    |||||||| ||||||||||||||| || |||| ||||||| || |||||| | ||||||| |||||||||||||||||||    
T  38020143 ttgttgcctttctaaacccttgttccaaccccctctatctccaggtttacaccgatacaatgtctatatttatagtaaaa 38020064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 6264546 - 6264604
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  6264546 ccatcgtgccacgatttttccagtgacttgcctcaaaactgaaacatccaatcatgcca 6264604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 35028529 - 35028463
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaa 117  Q
    |||||||||| |||||||||||||||||||||||| || |||| |||||||||||||  ||||||||    
T  35028529 tctgatacaatgtctatatttatagtaaaagtatccctaaaaaattggaacaaatctcaacctaaaa 35028463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3022163 - 3022086
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaa 78  Q
    |||||||| || |||||||||||||||||| | | |||||  | |||||||||||||||| |||||||||||||||||    
T  3022163 ttgttgcctttataaacccttgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaa 3022086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 22874133 - 22874060
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    ||||||||||||||||||||||| ||||||| || |||| ||||||||||| | || ||||||||| |||||||    
T  22874133 ttctaaacccttgtttcagccccctctatctccaggtttgctctgatacaaagcctgtatttatagcaaaagta 22874060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11739815 - 11739895
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    |||||| | ||||||||||||||| ||||||| |||||||  | |||||| || |||||| ||||||||||||||||||||    
T  11739815 ttgttgtctttctaaacccttgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 11739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 36561488 - 36561532
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgat 182  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  36561488 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 36561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 40699266 - 40699203
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    |||||||||||| |||||||||||||||||||||||||||| || | ||| |||||||||||||    
T  40699266 gtttactctgatgcaaggtctatatttatagtaaaagtatccctcagaaaattggaacaaatct 40699203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 14837259 - 14837193
Alignment:
Q  15 aacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaag 81  Q
    ||||||||||||||| || |||||||  | |||||| ||||||||| ||||||||||| ||||||||    
T  14837259 aacccttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 14837193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 17897547 - 17897581
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||||||||||||||||||||||||||    
T  17897547 tctgatacaaggtctatatttatagtaaaagtatc 17897581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 35215902 - 35215956
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 105  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  35215902 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 35215956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 37171049 - 37171183
Alignment:
Q  51 tctgatacaaggtctatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttatt-cgttgccagcgcacc 148  Q
    ||||||||||||| ||||||||||||  |||||| | |||||||| |||||||||||| ||| | ||||||||| | ||||||| | ||  |||||||||    
T  37171049 tctgatacaaggtttatatttatagtggaaagtaacccttaaaatatggaacaaatcttcac-tgaaaatacgtttttgttatttcctt--cagcgcacc 37171145  T
Q  149 atcctgccacgatgcgaccccatcgtgccacgattttt 186  Q
    ||| ||||||| | |||  |||||||| ||||| ||||    
T  37171146 atcgtgccacgttacgattccatcgtggcacgaatttt 37171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 20146906 - 20146946
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  20146906 gtttactttgatacaaggtctatatttatagtaaaaatatc 20146946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 20589611 - 20589555
Alignment:
Q  51 tctgatacaaggtctatatttatagtaaaag-tatcgcttaaaatttggaacaaatc 106  Q
    |||||||||||||||||||||||||||||||  ||| || |||| ||||||||||||    
T  20589611 tctgatacaaggtctatatttatagtaaaagcaatccctcaaaaattggaacaaatc 20589555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 33603870 - 33603818
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||| ||||||||||||||||||||| || | || |||||||||||||    
T  33603870 atacaaggtttatatttatagtaaaagtatccctaacaaattggaacaaatct 33603818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34979834 - 34979906
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttat 73  Q
    ||||| || |||||||| |||||||||||||| |||||||  | |||||| || |||||| ||||||||||||    
T  34979834 ttgttacctttctaaacgcttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttat 34979906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 36559082 - 36559138
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  36559082 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 36559138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 36561359 - 36561415
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  36561359 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 36561415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 18800702 - 18800757
Alignment:
Q  168 ccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtg 223  Q
    |||||||||||| |||||||||||| |||||  || ||||||||| ||||||||||    
T  18800702 ccatcgtgccacaatttttccagtgacttgcttcataactgaaacatccaatcgtg 18800757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 20147047 - 20147082
Alignment:
Q  45 gtttactctgatacaaggtctatatttatagtaaaa 80  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20147047 gtttactttgatacaaggtctatatttatagtaaaa 20147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 36561518 - 36561553
Alignment:
Q  147 ccatcctgccacgatgcgaccccatcgtgccacgat 182  Q
    ||||| ||||||||||||||||||||||||||||||    
T  36561518 ccatcgtgccacgatgcgaccccatcgtgccacgat 36561553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38020202 - 38020163
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  38020202 ttgttgcctttctaaacccttgtttcagccccctctatct 38020163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 35218286 - 35218315
Alignment:
Q  55 atacaaggtctatatttatagtaaaagtat 84  Q
    ||||||||||||||||||||||||||||||    
T  35218286 atacaaggtctatatttatagtaaaagtat 35218315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 82
Target Start/End: Original strand, 45332399 - 45332428
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagt 82  Q
    ||||||||||||||||||||||||||||||    
T  45332399 tgatacaaggtctatatttatagtaaaagt 45332428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 13828657 - 13828701
Alignment:
Q  63 tctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 107  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||    
T  13828657 tctatatttatagtaaaagaatccctaaaaaattggaacaaatct 13828701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17848443 - 17848342
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||| |||| |||||| |||||||  | | |||  ||||||||| | |||||||||||||||||| ||| || | || ||||||    
T  17848443 ttgttgtctttctaaaccctcgtttgagccccctctatctcaaggatta--ctgatacaaagcctatatttatagtaaaagaatccctcataaattggaa 17848346  T
Q  101 caaa 104  Q
    ||||    
T  17848345 caaa 17848342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 15052 - 14831
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||| | ||||||||||||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15052 ttgttgcctttctaaatcattgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 14953  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc 200  Q
    |||||||||||| ||||||| || | ||||||||| ||||||||||||||| || |||| || || |||||||||||||||  ||||||||| ||||||     
T  14952 caaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttgcct 14853  T
Q  201 caaaactgaaacctccaatcgt 222  Q
    || ||||||||| ||| |||||    
T  14852 cataactgaaacttcccatcgt 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 69546 - 69774
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  69546 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaattt 69645  T
Q  97 ggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 196  Q
    ||||||||||||||||  |||||| || | |||| |||| ||||||| ||||||| ||| ||||||||| ||||| |||| |||||||||||||||| ||    
T  69646 ggaacaaatctgcacc-caaaatatgtttctgtttttcgctgccagcacaccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgcttt 69744  T
Q  197 gccccaaaactgaaacctccaatcgtgcca 226  Q
    ||| ||||  ||||||||||||||||||||    
T  69745 gcctcaaacttgaaacctccaatcgtgcca 69774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 73278 - 73438
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct---tcat-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 96  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||  |||| || ||||||| ||||||||||||||||||||||||| ||||||||||    
T  73278 ttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaattt 73377  T
Q  97 ggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccac 158  Q
    ||||||||||||||||  |||||| || | |||| |||| ||||||| ||||||| ||||||    
T  73378 ggaacaaatctgcacc-caaaatatgtttctgtttttcgctgccagcacaccatcgtgccac 73438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 73440 - 73485
Alignment:
Q  181 atttttccagtgccttgccccaaaactgaaacctccaatcgtgcca 226  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  73440 atttttccagtgctttgcctcaaacttgaaacctccaatcgtgcca 73485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4030 - 3872
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||| ||||||||||||||||||||||| |||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  4030 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaa 3931  T
Q  101 caaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatcctgccacg 159  Q
    |||||||||||| |||||||||| ||||||||||| ||||| ||||||||| |||||||    
T  3930 caaatctgcacccaaaaatacgtttatgttattcgctgccatcgcaccatcgtgccacg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 52 - 194
Target Start/End: Complemental strand, 29143 - 29001
Alignment:
Q  52 ctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacctaaaaatacgtctatgttattcgttgccagcgcaccatc 151  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||  ||||||| || | |||| |||| |||||||||||||||    
T  29143 ctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatc 29044  T
Q  152 ctgccacgatgcgaccccatcgtgccacgatttttccagtgcc 194  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  29043 gtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 29001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 22062 - 21982
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  22062 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 21982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 24337 - 24257
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctcca 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  24337 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 24257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 22191 - 22135
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  22191 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 24466 - 24410
Alignment:
Q  53 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 109  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  24466 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 24410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1086 - 1168
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| |||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  1086 ttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 12907 - 12995
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaatcgtgcca 226  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  12907 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 12995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11728 - 11811
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||| ||||||||| || |||||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  11728 ttgttgtcattctaaatccctgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagtat 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 16082 - 16180
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 107  Q
    |||||||||||| ||||| |||| |||||||| | ||||||||||||||||  ||||||||||||||||||||||| || | |||||||||||||||||    
T  16082 ttctaaacccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatct 16180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41738 - 41820
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||| ||||||    
T  41738 ttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagta 41820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 52044 - 51959
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatct-tc-atgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||||||||||||||||||||||||||| ||||||| || | ||||| | ||||||||||||||||||||||||||||||||    
T  52044 ttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagtat 51959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 183895 - 183976
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagta 83  Q
    |||||||| ||||||||| |||||||||||| ||||||||  | |||||||||||||||||||||||||||||||| ||||||    
T  183895 ttgttgcctttctaaacctttgtttcagccc-ttctatctcaaagtttactctgatacaaggtctatatttatagtgaaagta 183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6232 - 6124
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||||  ||||||||||||||||||||||| |||||||  | |||| || ||||||||||||||||||||||||||||||   ||||||||  || ||    
T  6232 ttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaaactgtaa 6133  T
Q  101 caaatctgc 109  Q
    |||||||||    
T  6132 caaatctgc 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 6074 - 6013
Alignment:
Q  138 gccagcgcaccatcctgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 199  Q
    |||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  6074 gccagcgcaccatcgtgccatgatgagaccccatcatgccacgatttttccagtgccttgcc 6013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 79218 - 79135
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtat 84  Q
    |||||||| |||||||||||||||| |||||| |||||||  |  ||||||||||| |||||||||||||||||||||| ||||    
T  79218 ttgttgcctttctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaaggtat 79135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 79892 - 79789
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaa 100  Q
    |||||| | ||||||||||||||||||||||| |||||||  | |||||| |||||||||   |||||||||||||||||| ||| || | || ||||||    
T  79892 ttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaagaatccctcataaattggaa 79793  T
Q  101 caaa 104  Q
    ||||    
T  79792 caaa 79789  T

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Target: scaffold0468 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 1895 - 1958
Alignment:
Q  10 ttctaaacccttgtttcagccccttctatcttcatgtttac-tctgatacaaggtctatattta 72  Q
    ||||||||||||||||||||| | |||||||  | |||||| ||||||||||||||||||||||    
T  1895 ttctaaacccttgtttcagccacctctatctctaggtttacatctgatacaaggtctatattta 1958  T

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Target: scaffold0511 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2075 - 1968
Alignment:
Q  1 ttgttgccattctaaacccttgtttcagccccttctatctt------catgtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaa 93  Q
    |||||||| ||||||||||||||||||||||| | ||||||       | |||| || ||| |||||||||||||||||||| |||||||  |||| |||    
T  2075 ttgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacttataaa 1976  T
Q  94 tttggaac 101  Q
    ||||||||    
T  1975 tttggaac 1968  T

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Target: scaffold0133 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 4825 - 4773
Alignment:
Q  23 tttcagccccttctatcttcatgtttactctgatacaaggtctatatttatag 75  Q
    |||||| ||| |||||||  | |||||||||||||||||||||||||||||||    
T  4825 tttcagacccctctatctcaaggtttactctgatacaaggtctatatttatag 4773  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 16914 - 16986
Alignment:
Q  14 aaacccttgttt-cagccccttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatc 85  Q
    |||||||||||| ||||| | |||||||  | ||||||||||||||||||| |||||||||| ||||| ||||    
T  16914 aaacccttgttttcagcctcctctatctcaaggtttactctgatacaaggtttatatttatattaaaattatc 16986  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 85233 - 85161
Alignment:
Q  32 cttctatcttcatgtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 104  Q
    |||||||||  | ||||||| |||||||| | |||||||||||||||||| ||| || | || ||||||||||    
T  85233 cttctatctcaaggtttactttgatacaaagcctatatttatagtaaaagaatccctcataaattggaacaaa 85161  T

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