View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6975_high_9 (Length: 460)

Name: NF6975_high_9
Description: NF6975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6975_high_9
NF6975_high_9
[»] chr7 (34 HSPs)
chr7 (302-444)||(5793068-5793209)
chr7 (1-55)||(8001405-8001459)
chr7 (1-55)||(35133125-35133179)
chr7 (5-55)||(37837317-37837367)
chr7 (1-53)||(48316673-48316725)
chr7 (5-55)||(433530-433580)
chr7 (5-55)||(32684856-32684906)
chr7 (1-55)||(34899466-34899520)
chr7 (1-55)||(40993335-40993389)
chr7 (1-55)||(42978788-42978842)
chr7 (5-55)||(46822203-46822253)
chr7 (1-55)||(48061600-48061654)
chr7 (1-53)||(9449998-9450050)
chr7 (1-53)||(35261481-35261533)
chr7 (2-46)||(46822611-46822655)
chr7 (5-52)||(9137735-9137782)
chr7 (1-55)||(12141166-12141221)
chr7 (1-40)||(31481973-31482012)
chr7 (5-55)||(1485095-1485145)
chr7 (5-55)||(7640614-7640664)
chr7 (8-54)||(19404617-19404663)
chr7 (5-55)||(35496014-35496064)
chr7 (1-55)||(39171449-39171503)
chr7 (5-55)||(42408525-42408575)
chr7 (5-55)||(45349658-45349708)
chr7 (5-55)||(46339242-46339292)
chr7 (1-55)||(48930885-48930939)
chr7 (5-54)||(13592349-13592398)
chr7 (5-54)||(22927710-22927759)
chr7 (7-52)||(38649096-38649141)
chr7 (11-55)||(14627736-14627780)
chr7 (5-53)||(17222841-17222889)
chr7 (5-53)||(19297052-19297100)
chr7 (1-53)||(28407779-28407831)
[»] chr2 (54 HSPs)
chr2 (1-55)||(33585595-33585649)
chr2 (1-55)||(35220514-35220568)
chr2 (1-55)||(280984-281038)
chr2 (1-55)||(5427729-5427783)
chr2 (1-55)||(17249007-17249061)
chr2 (1-55)||(19062207-19062261)
chr2 (5-54)||(8971468-8971517)
chr2 (3-55)||(17994586-17994638)
chr2 (1-53)||(25508930-25508982)
chr2 (5-55)||(84020-84070)
chr2 (1-55)||(7646664-7646718)
chr2 (5-55)||(9986181-9986231)
chr2 (1-55)||(10237076-10237130)
chr2 (1-55)||(12554041-12554095)
chr2 (5-55)||(18763658-18763708)
chr2 (5-55)||(25087228-25087278)
chr2 (5-55)||(27248990-27249040)
chr2 (1-55)||(29173577-29173631)
chr2 (5-55)||(31580494-31580544)
chr2 (1-55)||(31788642-31788696)
chr2 (5-55)||(37994474-37994524)
chr2 (5-55)||(40659771-40659821)
chr2 (5-54)||(4228315-4228364)
chr2 (5-54)||(30420861-30420910)
chr2 (5-46)||(33923895-33923936)
chr2 (2-55)||(38445353-38445406)
chr2 (1-53)||(21570249-21570301)
chr2 (5-52)||(5754626-5754673)
chr2 (2-53)||(14955716-14955767)
chr2 (5-52)||(25622782-25622829)
chr2 (11-54)||(30399890-30399933)
chr2 (1-55)||(1421862-1421915)
chr2 (1-55)||(3309131-3309185)
chr2 (1-55)||(4041454-4041508)
chr2 (1-55)||(4778939-4778993)
chr2 (1-55)||(4904005-4904059)
chr2 (5-55)||(8806058-8806108)
chr2 (1-55)||(8809465-8809519)
chr2 (1-55)||(17151610-17151664)
chr2 (5-55)||(24461633-24461683)
chr2 (1-55)||(27097267-27097321)
chr2 (1-55)||(27949614-27949668)
chr2 (5-55)||(32913432-32913482)
chr2 (5-55)||(34600406-34600456)
chr2 (5-55)||(36234190-36234240)
chr2 (4-46)||(37876475-37876517)
chr2 (5-55)||(39641145-39641195)
chr2 (7-52)||(11561417-11561462)
chr2 (1-46)||(16376125-16376170)
chr2 (2-43)||(41327926-41327967)
chr2 (6-46)||(1415748-1415788)
chr2 (10-54)||(6174013-6174057)
chr2 (1-53)||(10929851-10929903)
chr2 (5-53)||(38575326-38575374)
[»] chr1 (54 HSPs)
chr1 (1-54)||(24583325-24583378)
chr1 (1-53)||(5984015-5984067)
chr1 (1-55)||(44915818-44915872)
chr1 (5-55)||(9687044-9687094)
chr1 (1-55)||(24583129-24583183)
chr1 (1-55)||(27456663-27456717)
chr1 (5-55)||(44543455-44543505)
chr1 (1-55)||(48750364-48750418)
chr1 (1-55)||(49504454-49504508)
chr1 (1-55)||(49627092-49627146)
chr1 (1-54)||(14872818-14872871)
chr1 (5-53)||(7836657-7836705)
chr1 (7-55)||(9172684-9172732)
chr1 (7-55)||(9180666-9180714)
chr1 (5-55)||(5701451-5701501)
chr1 (5-55)||(7342914-7342964)
chr1 (5-55)||(11454129-11454179)
chr1 (1-55)||(15431525-15431579)
chr1 (1-55)||(29738523-29738577)
chr1 (9-55)||(31317923-31317969)
chr1 (1-55)||(31919168-31919222)
chr1 (1-55)||(34529253-34529307)
chr1 (5-55)||(51872055-51872105)
chr1 (1-54)||(35484251-35484304)
chr1 (10-55)||(45805668-45805713)
chr1 (5-54)||(48217629-48217678)
chr1 (1-53)||(19061088-19061140)
chr1 (5-53)||(27579989-27580037)
chr1 (3-39)||(32395179-32395215)
chr1 (2-53)||(49648736-49648787)
chr1 (5-55)||(7997981-7998031)
chr1 (1-55)||(10776320-10776374)
chr1 (1-55)||(11462341-11462395)
chr1 (5-55)||(19715734-19715784)
chr1 (5-55)||(25406123-25406173)
chr1 (1-55)||(31984340-31984394)
chr1 (1-55)||(34412951-34413005)
chr1 (1-55)||(36775569-36775623)
chr1 (5-55)||(38520374-38520424)
chr1 (1-55)||(45415737-45415791)
chr1 (5-55)||(47133086-47133136)
chr1 (5-55)||(50165938-50165988)
chr1 (5-55)||(51868484-51868534)
chr1 (5-54)||(9919580-9919629)
chr1 (5-54)||(13144672-13144721)
chr1 (6-55)||(16162012-16162061)
chr1 (1-54)||(21947478-21947531)
chr1 (9-54)||(31130433-31130478)
chr1 (10-55)||(32676974-32677019)
chr1 (1-53)||(7337524-7337576)
chr1 (5-53)||(33817009-33817057)
chr1 (5-53)||(33876479-33876527)
chr1 (7-55)||(34519322-34519370)
chr1 (11-55)||(35584461-35584505)
[»] chr8 (44 HSPs)
chr8 (1-55)||(1236554-1236608)
chr8 (1-55)||(15344486-15344540)
chr8 (1-55)||(15433551-15433605)
chr8 (1-55)||(15524855-15524909)
chr8 (1-48)||(27110329-27110376)
chr8 (1-55)||(31013465-31013519)
chr8 (1-55)||(41060120-41060174)
chr8 (2-55)||(16928614-16928667)
chr8 (1-54)||(37971461-37971514)
chr8 (1-55)||(7883098-7883152)
chr8 (5-55)||(9619196-9619246)
chr8 (5-55)||(11464366-11464416)
chr8 (5-55)||(11725875-11725925)
chr8 (1-55)||(14585855-14585909)
chr8 (5-55)||(29777414-29777464)
chr8 (5-55)||(30568178-30568228)
chr8 (5-55)||(37565718-37565768)
chr8 (1-55)||(41896695-41896749)
chr8 (1-46)||(18890565-18890610)
chr8 (1-46)||(23230821-23230866)
chr8 (4-55)||(42046402-42046453)
chr8 (5-52)||(44578225-44578272)
chr8 (5-55)||(2656065-2656115)
chr8 (5-55)||(3240562-3240612)
chr8 (5-55)||(4809159-4809209)
chr8 (1-55)||(7198052-7198106)
chr8 (5-55)||(9498438-9498488)
chr8 (5-55)||(11267203-11267253)
chr8 (5-55)||(14906762-14906812)
chr8 (5-55)||(15047087-15047137)
chr8 (5-55)||(24099113-24099163)
chr8 (5-55)||(25190922-25190972)
chr8 (5-55)||(34611999-34612049)
chr8 (1-55)||(40211159-40211213)
chr8 (5-55)||(42447866-42447916)
chr8 (5-55)||(44099775-44099825)
chr8 (5-55)||(45445668-45445718)
chr8 (1-38)||(5046931-5046968)
chr8 (1-46)||(10377867-10377912)
chr8 (5-54)||(16794486-16794535)
chr8 (5-54)||(33896281-33896330)
chr8 (1-46)||(43833862-43833907)
chr8 (5-53)||(8412381-8412429)
chr8 (5-53)||(43192188-43192236)
[»] chr3 (57 HSPs)
chr3 (1-55)||(53807717-53807771)
chr3 (1-55)||(628782-628836)
chr3 (5-55)||(36906307-36906357)
chr3 (1-55)||(45568304-45568358)
chr3 (5-55)||(49552063-49552113)
chr3 (1-55)||(51923902-51923956)
chr3 (1-54)||(48650594-48650647)
chr3 (1-53)||(4711657-4711709)
chr3 (5-53)||(4821985-4822033)
chr3 (3-54)||(21916656-21916707)
chr3 (5-55)||(3848758-3848808)
chr3 (1-55)||(6954555-6954609)
chr3 (1-55)||(9797393-9797447)
chr3 (1-55)||(9998642-9998696)
chr3 (1-55)||(10108411-10108465)
chr3 (1-55)||(10229651-10229705)
chr3 (1-55)||(21289673-21289727)
chr3 (1-55)||(27856340-27856394)
chr3 (5-55)||(38854875-38854925)
chr3 (1-47)||(38859979-38860025)
chr3 (1-55)||(43017063-43017117)
chr3 (1-55)||(43488449-43488503)
chr3 (1-55)||(46304379-46304433)
chr3 (5-55)||(50194194-50194244)
chr3 (1-55)||(52922976-52923030)
chr3 (1-46)||(8914887-8914932)
chr3 (1-54)||(21313211-21313264)
chr3 (5-54)||(25631366-25631415)
chr3 (2-55)||(35175580-35175633)
chr3 (1-54)||(42460924-42460977)
chr3 (1-46)||(51303511-51303556)
chr3 (3-55)||(7448773-7448825)
chr3 (3-55)||(7456915-7456967)
chr3 (1-53)||(10233245-10233297)
chr3 (5-53)||(30648560-30648608)
chr3 (5-52)||(1074632-1074679)
chr3 (5-52)||(11819426-11819473)
chr3 (1-48)||(20987621-20987668)
chr3 (1-40)||(21533683-21533722)
chr3 (9-48)||(25849998-25850037)
chr3 (1-51)||(7546790-7546840)
chr3 (5-55)||(17237990-17238040)
chr3 (5-55)||(25162621-25162671)
chr3 (5-55)||(32607654-32607704)
chr3 (5-55)||(33580059-33580109)
chr3 (5-55)||(35499039-35499089)
chr3 (5-55)||(38440430-38440480)
chr3 (5-55)||(44907238-44907288)
chr3 (5-55)||(46934824-46934874)
chr3 (5-55)||(50611257-50611307)
chr3 (1-55)||(54149166-54149220)
chr3 (10-55)||(2342638-2342683)
chr3 (5-54)||(29503646-29503695)
chr3 (1-37)||(27706103-27706139)
chr3 (2-54)||(36461297-36461349)
chr3 (1-53)||(40556877-40556929)
chr3 (5-49)||(40702764-40702808)
[»] chr6 (39 HSPs)
chr6 (1-53)||(7976048-7976100)
chr6 (4-55)||(32327079-32327130)
chr6 (1-55)||(67860-67914)
chr6 (1-55)||(546208-546262)
chr6 (5-55)||(4984406-4984456)
chr6 (1-55)||(9341510-9341564)
chr6 (1-55)||(21426545-21426599)
chr6 (1-55)||(33053027-33053081)
chr6 (2-55)||(606382-606435)
chr6 (1-54)||(12170645-12170698)
chr6 (5-55)||(8027957-8028007)
chr6 (5-55)||(8497156-8497206)
chr6 (5-55)||(10228867-10228917)
chr6 (5-55)||(12059612-12059662)
chr6 (5-55)||(25064424-25064474)
chr6 (1-55)||(28981354-28981408)
chr6 (5-55)||(33740417-33740467)
chr6 (2-55)||(3913433-3913486)
chr6 (1-54)||(23128795-23128848)
chr6 (6-55)||(30776845-30776894)
chr6 (1-53)||(20226028-20226080)
chr6 (1-53)||(22120012-22120064)
chr6 (5-52)||(21507584-21507631)
chr6 (1-55)||(679285-679339)
chr6 (5-55)||(4088648-4088698)
chr6 (5-55)||(12653132-12653182)
chr6 (5-55)||(17237125-17237175)
chr6 (5-55)||(17334941-17334991)
chr6 (5-55)||(23947156-23947206)
chr6 (1-55)||(29255305-29255359)
chr6 (1-55)||(30493709-30493763)
chr6 (1-55)||(30608374-30608428)
chr6 (1-55)||(31296997-31297051)
chr6 (1-55)||(32802723-32802777)
chr6 (5-55)||(33110799-33110849)
chr6 (5-55)||(35001778-35001828)
chr6 (5-54)||(8196247-8196296)
chr6 (1-46)||(14802004-14802049)
chr6 (3-55)||(7515061-7515113)
[»] chr5 (42 HSPs)
chr5 (5-55)||(6011997-6012047)
chr5 (5-55)||(10332406-10332456)
chr5 (5-55)||(13422112-13422162)
chr5 (1-55)||(34945568-34945622)
chr5 (1-55)||(38597972-38598026)
chr5 (5-55)||(7241974-7242024)
chr5 (5-55)||(7247149-7247199)
chr5 (1-55)||(9113584-9113638)
chr5 (1-55)||(13007404-13007458)
chr5 (1-55)||(14211402-14211456)
chr5 (1-55)||(24229643-24229697)
chr5 (1-55)||(24874704-24874758)
chr5 (5-55)||(25980336-25980386)
chr5 (1-55)||(26825605-26825659)
chr5 (1-55)||(28540765-28540819)
chr5 (5-55)||(41184279-41184329)
chr5 (5-54)||(8096358-8096407)
chr5 (5-54)||(43148917-43148966)
chr5 (2-54)||(8088072-8088124)
chr5 (1-53)||(31391614-31391666)
chr5 (5-52)||(9425327-9425374)
chr5 (5-52)||(15710873-15710920)
chr5 (5-55)||(3271241-3271291)
chr5 (5-55)||(11768189-11768239)
chr5 (1-55)||(15571662-15571716)
chr5 (5-55)||(16981482-16981532)
chr5 (1-55)||(19103326-19103380)
chr5 (9-55)||(26877968-26878014)
chr5 (5-55)||(27266698-27266748)
chr5 (407-445)||(32126578-32126616)
chr5 (5-55)||(35475177-35475227)
chr5 (1-55)||(37985972-37986026)
chr5 (5-55)||(38007536-38007586)
chr5 (1-46)||(2979174-2979219)
chr5 (5-54)||(4954182-4954231)
chr5 (5-54)||(11976795-11976844)
chr5 (2-55)||(19121088-19121141)
chr5 (5-54)||(28235777-28235826)
chr5 (2-46)||(6217075-6217119)
chr5 (1-53)||(14082257-14082309)
chr5 (5-49)||(15571097-15571141)
chr5 (5-53)||(34881907-34881955)
[»] chr4 (46 HSPs)
chr4 (1-55)||(2520975-2521029)
chr4 (1-55)||(19853371-19853425)
chr4 (1-55)||(29966522-29966576)
chr4 (1-55)||(47320271-47320325)
chr4 (5-55)||(53616489-53616539)
chr4 (3-55)||(21686101-21686153)
chr4 (5-55)||(9645363-9645413)
chr4 (5-55)||(11299869-11299919)
chr4 (5-55)||(20569457-20569507)
chr4 (5-55)||(22301050-22301100)
chr4 (1-55)||(27652139-27652193)
chr4 (1-55)||(31891146-31891200)
chr4 (5-55)||(34024277-34024327)
chr4 (5-55)||(38706549-38706599)
chr4 (1-55)||(43095824-43095878)
chr4 (5-55)||(51318185-51318235)
chr4 (4-53)||(10496534-10496583)
chr4 (6-55)||(56199297-56199346)
chr4 (5-53)||(12493493-12493541)
chr4 (2-54)||(17949184-17949236)
chr4 (2-54)||(17953036-17953088)
chr4 (1-45)||(33921250-33921294)
chr4 (1-45)||(44596856-44596900)
chr4 (5-48)||(10359394-10359437)
chr4 (1-52)||(32766710-32766761)
chr4 (5-55)||(4644058-4644108)
chr4 (5-55)||(9528716-9528766)
chr4 (1-55)||(13634311-13634365)
chr4 (1-55)||(19896482-19896536)
chr4 (1-55)||(22611379-22611433)
chr4 (5-55)||(25274083-25274133)
chr4 (5-55)||(28857601-28857651)
chr4 (5-55)||(35261392-35261442)
chr4 (5-55)||(35348507-35348557)
chr4 (1-55)||(43510392-43510446)
chr4 (5-55)||(44947612-44947662)
chr4 (1-55)||(48257491-48257545)
chr4 (5-55)||(49410423-49410473)
chr4 (1-55)||(53811224-53811277)
chr4 (1-55)||(56040505-56040559)
chr4 (1-46)||(29960817-29960862)
chr4 (1-46)||(36194904-36194949)
chr4 (5-53)||(1532108-1532156)
chr4 (5-53)||(2115429-2115477)
chr4 (1-53)||(9178549-9178601)
chr4 (6-54)||(51888071-51888119)
[»] scaffold0219 (1 HSPs)
scaffold0219 (5-53)||(14732-14780)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-54)||(50953-51005)
[»] scaffold0495 (1 HSPs)
scaffold0495 (5-55)||(5586-5636)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-55)||(71159-71213)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-55)||(71729-71783)
[»] scaffold0603 (1 HSPs)
scaffold0603 (2-51)||(7892-7941)
[»] scaffold0157 (1 HSPs)
scaffold0157 (5-53)||(26936-26984)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-55)||(1832-1886)
[»] scaffold0146 (1 HSPs)
scaffold0146 (5-55)||(16159-16209)
[»] scaffold0136 (1 HSPs)
scaffold0136 (5-55)||(9901-9951)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-55)||(83275-83325)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-55)||(57947-57997)
[»] scaffold0127 (1 HSPs)
scaffold0127 (5-46)||(15672-15713)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-54)||(65902-65955)


Alignment Details
Target: chr7 (Bit Score: 123; Significance: 5e-63; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 302 - 444
Target Start/End: Original strand, 5793068 - 5793209
Alignment:
Q  302 atagtatggggtgtttcataaacatgagttggtggtggactgtatctggataccaagtcaatgcaagttaatgtcgaattggagttattgtcatagtgaa 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  5793068 atagtatggggtgtttcataaacatgagttggtggtggactgtatctggataccaagccaatgcaagttaatgtcgaattggagttatagtcatagtgaa 5793167  T
Q  402 gggtatgataagtgccaaatctatttgatttcacatatatatt 444  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  5793168 gggtat-atcagtgccaaatctatttgatttcacatatatatt 5793209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8001459 - 8001405
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  8001459 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 8001405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35133125 - 35133179
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||    
T  35133125 gttgtatgctattaacttgggtgatgtgagtttgttcgcagattcaccctatacg 35133179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 37837367 - 37837317
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  37837367 tatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 37837317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48316725 - 48316673
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  48316725 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttta 48316673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 433580 - 433530
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  433580 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 433530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 32684856 - 32684906
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || |||||||||||||| | ||||||||||||||    
T  32684856 tatgctattaacttggatgctgtaagtttgttcgtagattcatcctttacg 32684906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34899520 - 34899466
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  34899520 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacg 34899466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40993335 - 40993389
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  40993335 gttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 40993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42978788 - 42978842
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||| ||||||| ||||| ||||||||    
T  42978788 gttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacg 42978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 46822203 - 46822253
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  46822203 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 46822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48061600 - 48061654
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| | | |||||||||||| ||||| ||||||||    
T  48061600 gttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacg 48061654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9450050 - 9449998
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||| || |||| ||| |||||||||||||||||| ||||||    
T  9450050 gttgtatgctattaatttaggtgttgtgagtttgttcgcatattcacccttta 9449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35261481 - 35261533
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||||| |  ||| |||||||||||| ||||||||||||    
T  35261481 gttgtatgctattaacttggatattgtgagtttgttcgcagattcatccttta 35261533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 46822655 - 46822611
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||    
T  46822655 ttgtatgctattaacttggatgttgtgagtttgttcgcatattca 46822611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 9137735 - 9137782
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| || |||||||||||||||| |||||||||||    
T  9137735 tatgctattaacatggatgttgtaagtttgttcgcagattcatccttt 9137782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12141221 - 12141166
Alignment:
Q  1 gttgtatgctattaacttggg-tgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||| | ||||||    
T  12141221 gttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacg 12141166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31482012 - 31481973
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgca 40  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  31482012 gttgtatgctattaacttgggtgttgtatgtttgttcgca 31481973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 1485145 - 1485095
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || |||||  ||||||||| ||||||||||||||    
T  1485145 tatgctattaacttggatgttgtaaacttgttcgcagattcatcctttacg 1485095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 7640664 - 7640614
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  7640664 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacg 7640614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19404663 - 19404617
Alignment:
Q  8 gctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||| || ||| |||||||||||| |||||||||||||    
T  19404663 gctattaacttggatgctgtgagtttgttcgcagattcatcctttac 19404617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 35496064 - 35496014
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||| | |||||||| |||||    
T  35496064 tatgctattaacttggatgatgtgagtttgttcgtagattcatcccttacg 35496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39171503 - 39171449
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| | | |||||||| ||| ||||| ||||||||    
T  39171503 gttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacg 39171449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 42408525 - 42408575
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  42408525 tatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacg 42408575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 45349708 - 45349658
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| ||||||||||||  |||| ||||||||    
T  45349708 tatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacg 45349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 46339242 - 46339292
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||| |||||| ||||||||| || ||||||||||||||    
T  46339242 tatgttattaacttggatgatgtgagtttgttcacagattcatcctttacg 46339292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48930885 - 48930939
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| ||| ||||    
T  48930885 gttgtatgctattaacttgggtattgtgagtttgttcgcagattcaacctatacg 48930939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13592398 - 13592349
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||| | || ||| |||||||||||| |||||||||||||    
T  13592398 tatgctattaacttcgatgctgtgagtttgttcgcagattcatcctttac 13592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 22927759 - 22927710
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||| ||||||| || ||| |||||||||||| |||||||||||||    
T  22927759 tatgctatcaacttggttgctgtgagtttgttcgcaaattcatcctttac 22927710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 38649141 - 38649096
Alignment:
Q  7 tgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||| ||| || ||| ||||||||||||||||||||||||    
T  38649141 tgctattaacatggatgttgtgagtttgttcgcatattcatccttt 38649096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 14627780 - 14627736
Alignment:
Q  11 attaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||| || ||| | |||||||||||||||||||||||||    
T  14627780 attaacttggatgctgtgattttgttcgcatattcatcctttacg 14627736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17222889 - 17222841
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||| |||||||| || ||| |||||||||||| ||||||||||||    
T  17222889 tatgctagtaacttggatgttgtgagtttgttcgcagattcatccttta 17222841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19297052 - 19297100
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||| ||||||| ||| |||||||||||| ||||| ||||||    
T  19297052 tatgctattaatttgggtgttgtgagtttgttcgcagattcacccttta 19297100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28407831 - 28407779
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||||| || ||| |||||||||||| ||| | ||||||    
T  28407831 gttgtatgctattaacttggatgctgtgagtttgttcgcagatttacccttta 28407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33585649 - 33585595
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  33585649 gttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacg 33585595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35220514 - 35220568
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  35220514 gttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 35220568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 280984 - 281038
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  280984 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 281038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5427783 - 5427729
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  5427783 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 5427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17249061 - 17249007
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  17249061 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacg 17249007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19062261 - 19062207
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| ||||||||    
T  19062261 gttgtatgctattaacttgggtgatgtgagtttgctcgcagattcaccctttacg 19062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 8971517 - 8971468
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  8971517 tatgctattaacttggatgctgtgagtttgttcgcatattcatcctttac 8971468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 17994638 - 17994586
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  17994638 tgtatgctattaacttggatgttgtgagtttgttcgcatattcatccgttacg 17994586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25508982 - 25508930
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||| ||||    
T  25508982 gttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgttta 25508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 84070 - 84020
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  84070 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 84020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7646664 - 7646718
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| | ||||||    
T  7646664 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacg 7646718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9986231 - 9986181
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9986231 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 9986181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10237130 - 10237076
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  10237130 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 10237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12554095 - 12554041
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  12554095 gttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 12554041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 18763658 - 18763708
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  18763658 tatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 18763708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25087228 - 25087278
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  25087228 tatgctattaacttggatgatgtgagtttgttcccagattcatcctttacg 25087278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 27249040 - 27248990
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  27249040 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 27248990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29173631 - 29173577
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||||    
T  29173631 gttgtatgttattaactttggtgttgtgagtttgttcgcagattcatcctttacg 29173577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 31580544 - 31580494
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  31580544 tatgctattaacttggatgatgtgagtttgttcgcagattcatcatttacg 31580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31788642 - 31788696
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  31788642 gttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacg 31788696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 37994474 - 37994524
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  37994474 tatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacg 37994524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 40659821 - 40659771
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  40659821 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 40659771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 4228315 - 4228364
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  4228315 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 4228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 30420861 - 30420910
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  30420861 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 30420910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 33923895 - 33923936
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  33923895 tatgctattaacttgggtgctgtgagtttgttcgcatattca 33923936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 38445353 - 38445406
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||||    
T  38445353 ttgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctttacg 38445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21570301 - 21570249
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||||  || |||||||||||||||| ||||| ||||||    
T  21570301 gttgtatgctattaacttgaatgctgtaagtttgttcgcagattcagccttta 21570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 5754626 - 5754673
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  5754626 tatgctattaacatggatgatgtgagtttgttcacatattcatccttt 5754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 14955716 - 14955767
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||    
T  14955716 ttgtatgttattaacttaggtgttgtgagtttgttcgcagattcatccttta 14955767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 25622829 - 25622782
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| || ||| ||||||||||||||||||||||||    
T  25622829 tatgctattaacatggatgttgtgagtttgttcgcatattcatccttt 25622782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 30399933 - 30399890
Alignment:
Q  11 attaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||| |||| |||||||||||||||| |||||||||||||    
T  30399933 attaacttaggtgttgtaagtttgttcgcagattcatcctttac 30399890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1421862 - 1421915
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  1421862 gttgtatgctattaacttgggtgttgtgagtttgtttgcagattca-cctttacg 1421915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3309131 - 3309185
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||||| ||| ||||    
T  3309131 gttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacg 3309185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4041508 - 4041454
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||||| |||| ||| |||||||||||| ||||| ||||||||    
T  4041508 gttgcatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacg 4041454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4778939 - 4778993
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||| ||||||| ||| |||||||||||| ||||| ||||||||    
T  4778939 gttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacg 4778993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4904059 - 4904005
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||| | ||||| ||||||||    
T  4904059 gttgtatgctattaacttggatgttgtgagtttgttcgtagattcagcctttacg 4904005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 8806058 - 8806108
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| || ||||||||| ||||||||||||||    
T  8806058 tatgctattaacttggatgttgtgagattgttcgcagattcatcctttacg 8806108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8809465 - 8809519
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||| || |||| ||||||    
T  8809465 gttgtatgctattaacttggatgttgtgagtttgttcgcagatccatcttttacg 8809519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17151610 - 17151664
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||  || ||| ||||||| |||||||||| ||||||||    
T  17151610 gttgtatgctattaacttgaatgttgtgagtttgtccgcatattcaccctttacg 17151664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 24461633 - 24461683
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| |||| ||| ||||||||||||  |||||||||||||    
T  24461633 tatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacg 24461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27097321 - 27097267
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| ||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  27097321 gttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctttacg 27097267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27949614 - 27949668
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||| | ||||||| ||||||    
T  27949614 gttgtatgctattaacttggatgttgtgagtttgttcggagattcatcatttacg 27949668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 32913432 - 32913482
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||| |||||||| ||||||||||||||    
T  32913432 tatgctattaacttggatgttgtgagtatgttcgcagattcatcctttacg 32913482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 34600406 - 34600456
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||  ||||||||| || ||||||||||||||    
T  34600406 tatgctattaacttggatgatgcgagtttgttcacagattcatcctttacg 34600456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 36234190 - 36234240
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  36234190 tatgctattaacttggatgttgtgagtttgttcacagattcatcctttacg 36234240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 37876517 - 37876475
Alignment:
Q  4 gtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||||||||||||||||  |||||||||||| |||||    
T  37876517 gtatgctattaacttgggtgatgcgagtttgttcgcagattca 37876475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 39641195 - 39641145
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||| |||||||||| |||||| |||||||||||| |||||| |||||||    
T  39641195 tatgcgattaacttggatgatgtgagtttgttcgcaaattcattctttacg 39641145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 11561462 - 11561417
Alignment:
Q  7 tgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||| ||| || |||||||||||||||| |||||||||||    
T  11561462 tgctattaacatggatgttgtaagtttgttcgcagattcatccttt 11561417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16376125 - 16376170
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||| |||||||||| |||||| |||||||||||| |||||    
T  16376125 gttgtatgcgattaacttggatgatgtgagtttgttcgcagattca 16376170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 41327926 - 41327967
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatat 43  Q
    ||||||||||||||||| |||||||| ||||| |||||||||    
T  41327926 ttgtatgctattaacttaggtgatgtgagtttattcgcatat 41327967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 1415748 - 1415788
Alignment:
Q  6 atgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  1415748 atgctattaacttgggtgttgtgagtttgttcgcagattca 1415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6174013 - 6174057
Alignment:
Q  10 tattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||| || ||| |||||||||||| |||||||||||||    
T  6174013 tattaacttggatgttgtgagtttgttcgcagattcatcctttac 6174057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10929851 - 10929903
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||| ||||||||||||||| || ||| |||||||| ||||||||| ||||||    
T  10929851 gttgaatgctattaacttggatgctgtgagtttgtttgcatattcacccttta 10929903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 38575374 - 38575326
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||| ||||| || ||| |||||||||||| ||||||||||||    
T  38575374 tatgctattatcttggatgttgtgagtttgttcgcagattcatccttta 38575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24583325 - 24583378
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  24583325 gttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttac 24583378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5984015 - 5984067
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  5984015 gttgtatgctattaacttgggtgatgtgagtttgttcgcatattcacccttta 5984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44915818 - 44915872
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  44915818 gttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacg 44915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9687094 - 9687044
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  9687094 tatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 9687044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24583129 - 24583183
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||||||||||||||| ||||||||| || ||||||||||||||    
T  24583129 gttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacg 24583183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27456663 - 27456717
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  27456663 gttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttacg 27456717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 44543455 - 44543505
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  44543455 tatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 44543505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48750364 - 48750418
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||    
T  48750364 gttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacg 48750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 49504508 - 49504454
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  49504508 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 49504454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49627092 - 49627146
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  49627092 gttgtatgctattaatttgggtgttgtgagtttgttcgcagattcatcctttacg 49627146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14872818 - 14872871
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||||||| || ||| |||||||||||||||||| |||||||    
T  14872818 gttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttac 14872871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 7836705 - 7836657
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  7836705 tatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 7836657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 9172684 - 9172732
Alignment:
Q  7 tgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  9172684 tgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 9172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 9180666 - 9180714
Alignment:
Q  7 tgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  9180666 tgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 9180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 5701451 - 5701501
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  5701451 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 5701501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 7342914 - 7342964
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  7342914 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 7342964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 11454129 - 11454179
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  11454129 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 11454179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15431579 - 15431525
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||| |||||| || ||| |||||||||||| ||||||||||||||    
T  15431579 gttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacg 15431525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29738577 - 29738523
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||| ||||||| ||||| ||||||||    
T  29738577 gttgtatgctattaacttgggtgctgtgagttcgttcgcagattcaccctttacg 29738523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 31317923 - 31317969
Alignment:
Q  9 ctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  31317923 ctattaacttgggtgatgtgagtttgttcgcaaattcaccctttacg 31317969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31919168 - 31919222
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||  |||||||||||| ||||||||||||||    
T  31919168 gttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacg 31919222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34529253 - 34529307
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||  |||||||    
T  34529253 gttgtatactattaacttgggtgatgtgagtttgttcgcagattcaatctttacg 34529307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 51872055 - 51872105
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  51872055 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 51872105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35484304 - 35484251
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||  |||||||    
T  35484304 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttac 35484251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 45805713 - 45805668
Alignment:
Q  10 tattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  45805713 tattaacttggatgatgtgagtttgttcgcagattcatcctttacg 45805668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 48217629 - 48217678
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  48217629 tatgctattaacttggatgttgtgagtttgttcgcaaattcatcctttac 48217678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19061088 - 19061140
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||| ||||    
T  19061088 gttgtatgctattaacttggatgttgtgagtttgttcgcacattcatctttta 19061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 27580037 - 27579989
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  27580037 tatgctattaacttgggtgttgtgagtttgttcgcagattcacccttta 27579989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 32395179 - 32395215
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgc 39  Q
    ||||||||||||||||||||| |||||||||||||||    
T  32395179 tgtatgctattaacttgggtgctgtaagtttgttcgc 32395215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 49648787 - 49648736
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||| |||||| ||||||||||| ||||||||| ||||||| |||||||    
T  49648787 ttgtatgttattaatttgggtgatgtgagtttgttcacatattcgtccttta 49648736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 7997981 - 7998031
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  7997981 tatgttattaacttggatgatgtgagtttgtttgcagattcatcctttacg 7998031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10776374 - 10776320
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| ||||||||||||||| ||| ||||||||||||  |||| ||||||||    
T  10776374 gttgtattctattaacttgggtgctgtgagtttgttcgcaatttcaccctttacg 10776320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11462395 - 11462341
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| | ||||||    
T  11462395 gttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatttacg 11462341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 19715784 - 19715734
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||| |||||| ||||||||||||||    
T  19715784 tatgctattaacttggatgctgtgagtttattcgcagattcatcctttacg 19715734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 25406173 - 25406123
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  25406173 tatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacg 25406123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31984340 - 31984394
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| | |||||||||| ||| | ||||||||    
T  31984340 gttgtatgctattaacttgggtgttgtgactttgttcgcagatttaccctttacg 31984394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34413005 - 34412951
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  34413005 gttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 34412951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36775623 - 36775569
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| ||| ||||    
T  36775623 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacg 36775569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 38520424 - 38520374
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  38520424 tatgctattaacttggatgttgtgagtttgttcacaaattcatcctttacg 38520374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45415737 - 45415791
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||  |||||| ||||||| ||| |||||||||||||||||| ||||||||    
T  45415737 gttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacg 45415791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 47133086 - 47133136
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||| ||||||||||    
T  47133086 tatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacg 47133136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 50165988 - 50165938
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  50165988 tatgctattaacttggatgttgtgagtttgttcacagattcatcctttacg 50165938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 51868534 - 51868484
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  51868534 tatgttattaacttggatgctgtgagtttgttcgcaaattcatcctttacg 51868484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 9919580 - 9919629
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| ||| |||||||||    
T  9919580 tatgctattaacttggatgctgtgagtttgttcgcagatttatcctttac 9919629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13144721 - 13144672
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| ||||| |||||||    
T  13144721 tatgctattaacttggatgttgtgagtttgttcgcagattcaccctttac 13144672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 16162012 - 16162061
Alignment:
Q  6 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||| |||| ||| |||||||||||| ||||| ||||||||    
T  16162012 atgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacg 16162061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21947531 - 21947478
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||  |||||||||||||||||| |||||||||||| ||| | |||||||    
T  21947531 gttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttac 21947478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 31130478 - 31130433
Alignment:
Q  9 ctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||| || ||| ||||||||| ||||||||||||||||    
T  31130478 ctattaacttggatgctgtgagtttgttcacatattcatcctttac 31130433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 32677019 - 32676974
Alignment:
Q  10 tattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  32677019 tattaacttggatgatgtgagtttgttcgcagattcatcttttacg 32676974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7337576 - 7337524
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||| ||||||||||||||| || ||| |||||||||||| ||||| ||||||    
T  7337576 gttgcatgctattaacttggctgttgtgagtttgttcgcagattcacccttta 7337524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 33817057 - 33817009
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||| ||||||||||| |||||| |||||||||||  ||||||||||||    
T  33817057 tatgttattaacttggatgatgtgagtttgttcgcggattcatccttta 33817009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 33876527 - 33876479
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||| ||||||||||| |||||| |||||||||||  ||||||||||||    
T  33876527 tatgttattaacttggatgatgtgagtttgttcgcggattcatccttta 33876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 34519322 - 34519370
Alignment:
Q  7 tgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| |  ||| |||||||||||| ||||||||||||||    
T  34519322 tgctattaacttggatcctgtgagtttgttcgcagattcatcctttacg 34519370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 35584505 - 35584461
Alignment:
Q  11 attaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||| || ||| |||||||||||| ||||||||||||||    
T  35584505 attaacttggatgctgtgagtttgttcgcaaattcatcctttacg 35584461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1236608 - 1236554
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  1236608 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 1236554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15344486 - 15344540
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  15344486 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 15344540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15433551 - 15433605
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  15433551 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 15433605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15524855 - 15524909
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  15524855 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 15524909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27110376 - 27110329
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 48  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27110376 gttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatc 27110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31013519 - 31013465
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  31013519 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 31013465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41060174 - 41060120
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||| || ||||||||||| |||||||||||| ||||||||||||||    
T  41060174 gttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacg 41060120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 16928667 - 16928614
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  16928667 ttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 16928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37971461 - 37971514
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  37971461 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttac 37971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7883152 - 7883098
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  7883152 gttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 7883098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9619246 - 9619196
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9619246 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 9619196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 11464366 - 11464416
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||| | ||||||||||||||    
T  11464366 tatgctattaacttggatgatgtgagtttgttcgtagattcatcctttacg 11464416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 11725875 - 11725925
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  11725875 tatgctattaacttggatgatgtgagtttgttcacagattcatcctttacg 11725925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14585855 - 14585909
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  14585855 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacg 14585909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 29777414 - 29777464
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  29777414 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 29777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 30568228 - 30568178
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  30568228 tatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 30568178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 37565768 - 37565718
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  37565768 tatgctattaacttggatgctgtgagtttgttcgcaaattcatcctttacg 37565718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41896695 - 41896749
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  41896695 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 41896749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18890610 - 18890565
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||    
T  18890610 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattca 18890565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23230821 - 23230866
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||    
T  23230821 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattca 23230866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 42046402 - 42046453
Alignment:
Q  4 gtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  42046402 gtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 42046453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 44578225 - 44578272
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||||||| ||||||||||||| || || |||||||||||    
T  44578225 tatgctattaacttggatgatgtaagtttgatcacagattcatccttt 44578272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 2656065 - 2656115
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  2656065 tatgctattaacttggatgctgtgagtttgttcgcaaattcatcatttacg 2656115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 3240562 - 3240612
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||| |||||| ||||||||||||||    
T  3240562 tatgctattaacttggatgttgtgagtttattcgcagattcatcctttacg 3240612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 4809159 - 4809209
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| | || ||| |||||||||||| ||||||||||||||    
T  4809159 tatgctattaacttagatgttgtgagtttgttcgcagattcatcctttacg 4809209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7198106 - 7198052
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||| ||||||| ||| ||||| |||||| ||||| ||||||||    
T  7198106 gttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacg 7198052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9498488 - 9498438
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  9498488 tatgctattaacttggatgctgtgagtttgttcacagattcatcctttacg 9498438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 11267203 - 11267253
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||||||||||  |||||||||||||    
T  11267203 tatgctattaacttggatgctgtgagtttgttcgcagtttcatcctttacg 11267253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 14906812 - 14906762
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |  ||| |||||||||||| ||||||||||||||    
T  14906812 tatgctattaacttggatcctgtgagtttgttcgcagattcatcctttacg 14906762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 15047087 - 15047137
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||  || |||||||||||||||| ||||||| ||||||    
T  15047087 tatgctattaacttgaatgttgtaagtttgttcgcagattcatcttttacg 15047137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 24099163 - 24099113
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  24099163 tatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacg 24099113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 25190972 - 25190922
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| | ||||||    
T  25190972 tatgctattaacttgggtgctgtgagtttgttcgcagattcaccttttacg 25190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 34611999 - 34612049
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| |||||| |||||||    
T  34611999 tatgctattaacttggatgttgtgagtttgttcgcagattcattctttacg 34612049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40211213 - 40211159
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||  |||||||||| |||||||||| | ||||| ||||||||    
T  40211213 gttgtatgctattaatctgggtgatgtgagtttgttcgtagattcaccctttacg 40211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 42447916 - 42447866
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||||||| ||||||||| |||||||    
T  42447916 tatgctattaacttggatgttgtgagtttgttcacatattcattctttacg 42447866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 44099825 - 44099775
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||| ||| ||||||||||||||    
T  44099825 tatgctattaacttggatgttgtgagtttgttagcagattcatcctttacg 44099775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 45445718 - 45445668
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||||||||| | ||||||    
T  45445718 tatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacg 45445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5046931 - 5046968
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcg 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  5046931 gttgtatgttattaacttgggtgatgtgagtttgttcg 5046968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10377867 - 10377912
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  10377867 gttgtatgctattaacttgggtgctgtgagtttgctcgcagattca 10377912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 16794486 - 16794535
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||| ||||||||||| || ||| |||||||||||| |||||||||||||    
T  16794486 tatggtattaacttggatgttgtgagtttgttcgcagattcatcctttac 16794535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 33896281 - 33896330
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| ||||| |||||| |||||||||||||    
T  33896281 tatgctattaacttggatgttgtgagttttttcgcagattcatcctttac 33896330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43833907 - 43833862
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  43833907 gttgtatgctattaacttgggtgctgtgagtttgtttgcagattca 43833862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8412429 - 8412381
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||| ||| |||||||| ||| ||||| ||||||    
T  8412429 tatgctattaacttgggtgttgtgagtttgtttgcagattcacccttta 8412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 43192236 - 43192188
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||| || | | |||||||||||| ||||||||||||    
T  43192236 tatgctattaacttggatgttctgagtttgttcgcagattcatccttta 43192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53807771 - 53807717
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  53807771 gttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacg 53807717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 628836 - 628782
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  628836 gttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacg 628782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 36906307 - 36906357
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  36906307 tatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 36906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45568358 - 45568304
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||    
T  45568358 gttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacg 45568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 49552113 - 49552063
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  49552113 tatgctattaacttggatgctgtaagtttgttcgcagattcatcctttacg 49552063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 51923902 - 51923956
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||    
T  51923902 gttgtatgctattaacttgggtgttgtgagtttgttcgcatatccatcctatacg 51923956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48650647 - 48650594
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  48650647 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttac 48650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4711657 - 4711709
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  4711657 gttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatccttta 4711709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 4821985 - 4822033
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  4821985 tatgctattaacttgggtgatgtgagtttgttcgcagattcattcttta 4822033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 21916656 - 21916707
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||||| |||||| ||||||||| || |||||||||||||    
T  21916656 tgtatgctattaacttggatgatgtgagtttgttctcagattcatcctttac 21916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 3848808 - 3848758
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  3848808 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 3848758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6954609 - 6954555
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  6954609 gttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacg 6954555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9797447 - 9797393
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||| ||||||||    
T  9797447 gttgtatgctattaacttgggtgctgtgagtttgtttgtatattcaccctttacg 9797393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9998642 - 9998696
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  9998642 gttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 9998696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10108411 - 10108465
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  10108411 gttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 10108465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10229651 - 10229705
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  10229651 gttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 10229705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21289727 - 21289673
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  21289727 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacg 21289673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27856340 - 27856394
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  27856340 gttgcatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacg 27856394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 38854925 - 38854875
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  38854925 tatgttattaacttggatgatgtgagttttttcgcatattcatcctttacg 38854875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38860025 - 38859979
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcat 47  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  38860025 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcat 38859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43017063 - 43017117
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| |||| ||| ||||| ||| |||||||||||||||||    
T  43017063 gttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacg 43017117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43488503 - 43488449
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||||||| ||||||    
T  43488503 gttgtatgctattaatttgggtgctgtgagtttgttcgcagattcatcatttacg 43488449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46304433 - 46304379
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||| ||||||||    
T  46304433 gttgtatgctattaacttgagtgttgtgagtttgttcgcagattcaccctttacg 46304379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 50194244 - 50194194
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  50194244 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 50194194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52923030 - 52922976
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  52923030 gttgtatgctattaacttggctgctgtgagtttgttcgcagattcaccctttacg 52922976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8914887 - 8914932
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  8914887 gttgtatgctattaacttgagtgatgtgagtttgttcgcagattca 8914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21313211 - 21313264
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| |||||||    
T  21313211 gttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttac 21313264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 25631415 - 25631366
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||| ||||||||||| |||||| |||||||||||| |||||||||||||    
T  25631415 tatgttattaacttggatgatgtgagtttgttcgcagattcatcctttac 25631366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 35175580 - 35175633
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| ||| ||| |||||||||||| ||||||| ||||||    
T  35175580 ttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacg 35175633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42460924 - 42460977
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| |||||||    
T  42460924 gttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttac 42460977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51303556 - 51303511
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||    
T  51303556 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattca 51303511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7448825 - 7448773
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| | ||||||    
T  7448825 tgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacg 7448773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7456967 - 7456915
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| | ||||||    
T  7456967 tgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacg 7456915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10233245 - 10233297
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||    
T  10233245 gttgtatgctattaacttgggtgctgtgagtttgttcgtacattcacccttta 10233297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30648608 - 30648560
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||    
T  30648608 tatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 30648560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 1074679 - 1074632
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  1074679 tatgctattaacatggatgatgtgagtttgttcacatattcatccttt 1074632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 11819426 - 11819473
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  11819426 tatgctattaacatggatgatgtgagtttgttcacatattcatccttt 11819473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20987668 - 20987621
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 48  Q
    |||||||||||||||||||| |||||| |||||||||| | |||||||    
T  20987668 gttgtatgctattaacttggatgatgtgagtttgttcgtagattcatc 20987621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21533722 - 21533683
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgca 40  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  21533722 gttgtatgctattaacttgggtgctgtgagtttgttcgca 21533683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 25849998 - 25850037
Alignment:
Q  9 ctattaacttgggtgatgtaagtttgttcgcatattcatc 48  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  25849998 ctattaacttgggtgttgtgagtttgttcgcatattcatc 25850037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7546790 - 7546840
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctt 51  Q
    ||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||    
T  7546790 gttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctt 7546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 17237990 - 17238040
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||  |||| |||||||||    
T  17237990 tatgctattaacttggatgatgtgagtttgttcgctgattcttcctttacg 17238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25162621 - 25162671
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||  ||||||||||||||    
T  25162621 tatgctattaacttggatgttgtgagtttgttcgcggattcatcctttacg 25162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 32607654 - 32607704
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||| ||| || ||| |||||||||||| ||||||||||||||    
T  32607654 tatgctattaacctggatgttgtgagtttgttcgcagattcatcctttacg 32607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 33580059 - 33580109
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| | |||||||||| ||||| ||||||||    
T  33580059 tatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacg 33580109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 35499089 - 35499039
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||| |||| || ||||||||| |||||| ||||||||||||||    
T  35499089 tatgctattaatttggatgttgtaagttttttcgcagattcatcctttacg 35499039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 38440480 - 38440430
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  38440480 tatgctattaacttggatgctgtgagtttgctcgcagattcatcctttacg 38440430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 44907288 - 44907238
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||| |||| || ||| |||||||||||| ||||||||||||||    
T  44907288 tatgctattaatttggatgttgtgagtttgttcgcagattcatcctttacg 44907238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 46934824 - 46934874
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||| | ||||||||||||||    
T  46934824 tatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacg 46934874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 50611307 - 50611257
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||| |  ||||||||||| ||||||||||||||    
T  50611307 tatgctattaacttggatgatatgggtttgttcgcagattcatcctttacg 50611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54149166 - 54149220
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||||||| |||| |||||||  |||| ||||||||    
T  54149166 gttgtatgctattaacctgggtgatgtgagttagttcgcaggttcaccctttacg 54149220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 2342638 - 2342683
Alignment:
Q  10 tattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  2342638 tattaacttggatgctgtgagtttgttcgcagattcatcctttacg 2342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 29503646 - 29503695
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| |  ||| ||| ||||||||||||||||||||||    
T  29503646 tatgctattaacttggattctgtgagtatgttcgcatattcatcctttac 29503695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27706139 - 27706103
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttc 37  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  27706139 gttgtatgctattaacttgggtgctgttagtttgttc 27706103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 36461349 - 36461297
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||||| ||| ||| |||||||| ||| ||||| |||||||    
T  36461349 ttgtatgctattaacttgagtgctgtgagtttgttagcagattcaccctttac 36461297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40556877 - 40556929
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||  ||||||||| ||| |||||||||||| ||||| ||||||    
T  40556877 gttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcacccttta 40556929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 40702764 - 40702808
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcc 49  Q
    |||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  40702764 tatgctcttaacatggatgatgtaagtttgttcgcagattcatcc 40702808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7976100 - 7976048
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  7976100 gttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatccttta 7976048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 32327130 - 32327079
Alignment:
Q  4 gtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  32327130 gtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 32327079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 67914 - 67860
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  67914 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 67860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 546208 - 546262
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||    
T  546208 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacg 546262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 4984456 - 4984406
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  4984456 tatgctattaacttagatgatgtaagtttgttcgcagattcatcctttacg 4984406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9341564 - 9341510
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  9341564 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 9341510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21426599 - 21426545
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||    
T  21426599 gttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacg 21426545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33053081 - 33053027
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  33053081 gttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacg 33053027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 606382 - 606435
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  606382 ttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 606435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12170645 - 12170698
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||| |||||||    
T  12170645 gttgtatgctattaacttgggtgctgtgagtttgctcgcatattcaccctttac 12170698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 8028007 - 8027957
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| | |||||| |||||||||||| ||||||||||||||    
T  8028007 tatgctattaactttgatgatgtgagtttgttcgcaaattcatcctttacg 8027957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 8497156 - 8497206
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  8497156 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 8497206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 10228867 - 10228917
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  10228867 tatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacg 10228917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 12059662 - 12059612
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  12059662 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 12059612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25064424 - 25064474
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  25064424 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 25064474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28981354 - 28981408
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| |||| ||| ||||||||| |||||||| ||||||||    
T  28981354 gttgtatgctattaactttggtgttgtgagtttgttcacatattcaccctttacg 28981408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 33740467 - 33740417
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| | |||| |||||||||||| ||||||||||||||    
T  33740467 tatgctattaacttggataatgtgagtttgttcgcagattcatcctttacg 33740417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 3913486 - 3913433
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||||| ||| |||||||||||| || || ||||||||    
T  3913486 ttgtatgctattaacttgggtgttgtgagtttgttcgcagatgcaccctttacg 3913433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23128795 - 23128848
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||||| |||||||    
T  23128795 gttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttac 23128848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 30776845 - 30776894
Alignment:
Q  6 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  30776845 atgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 30776894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20226028 - 20226080
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||||| ||||    
T  20226028 gttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcattta 20226080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22120012 - 22120064
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||||| ||||    
T  22120012 gttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcattta 22120064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21507631 - 21507584
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  21507631 tatgctattaacatggatgatgtgagtttgttcacatattcatccttt 21507584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 679285 - 679339
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| |||| ||| |||||||||| | ||||| ||||||||    
T  679285 gttgtatgctattaacttaggtgttgtgagtttgttcgtagattcaccctttacg 679339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 4088648 - 4088698
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||| |||||||||| || ||| |||||||||||| ||||||||||||||    
T  4088648 tatgccattaacttggatgctgtgagtttgttcgcagattcatcctttacg 4088698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 12653132 - 12653182
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||| ||||    
T  12653132 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctgtacg 12653182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 17237175 - 17237125
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||| |||||||| ||||||||||||||    
T  17237175 tatgctattaacttggatgttgtgagtgtgttcgcagattcatcctttacg 17237125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 17334941 - 17334991
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  17334941 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacg 17334991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 23947206 - 23947156
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||| | ||||||||||||||    
T  23947206 tatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacg 23947156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29255359 - 29255305
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| ||||||||| || ||||| || |||||    
T  29255359 gttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccattacg 29255305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30493709 - 30493763
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| ||| | |||||||||| ||||| ||||||||    
T  30493709 gttgtatgctattaacctgggtgttgtgaatttgttcgcagattcaccctttacg 30493763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30608428 - 30608374
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| || ||||| ||| ||||||||||||||    
T  30608428 gttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacg 30608374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31296997 - 31297051
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||| |||| |||| | ||||||||||||| |||| ||||||||    
T  31296997 gttgtatgctattaatttggatgatttgagtttgttcgcattttcaccctttacg 31297051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32802723 - 32802777
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||| ||||||| ||| |||||| ||||||||||| ||||||||    
T  32802723 gttgtatgatattaaattgggtgctgtgagtttgatcgcatattcaccctttacg 32802777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 33110799 - 33110849
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||||| || ||||||||||||||||||    
T  33110799 tatgctattaacttggatgttgtgagtttatttgcatattcatcctttacg 33110849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 35001778 - 35001828
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||| ||||||||||    
T  35001778 tatgctattaacttggatgttgtgagtttgttcgcagattaatcctttacg 35001828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 8196296 - 8196247
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| ||| |||||||| |||||||||||||    
T  8196296 tatgctattaacttggatgctgtgagtgtgttcgcaaattcatcctttac 8196247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14802004 - 14802049
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||    
T  14802004 gttgtatgctattaacttggatgctgtgagtttgttcgcagattca 14802049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7515113 - 7515061
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| |  ||| |||||||||||| ||||| ||||||||    
T  7515113 tgtatgctattaacttggtttctgtgagtttgttcgcaaattcaccctttacg 7515061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 6012047 - 6011997
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  6012047 tatgctattaacttgggtgatgtgagtttgttcgcagattcaccctttacg 6011997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 10332456 - 10332406
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  10332456 tatgctattaacttgggtgatgtgagtttgttcacagattcatcctttacg 10332406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 13422112 - 13422162
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||||||    
T  13422112 tatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacg 13422162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34945568 - 34945622
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  34945568 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 34945622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38597972 - 38598026
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  38597972 gttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacg 38598026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 7241974 - 7242024
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  7241974 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 7242024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 7247149 - 7247199
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  7247149 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 7247199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9113638 - 9113584
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| | | |||||||||||| ||||| ||||||||    
T  9113638 gttgtatgctattaacttgggtgttctgagtttgttcgcagattcaccctttacg 9113584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13007404 - 13007458
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  13007404 gttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacg 13007458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14211402 - 14211456
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  14211402 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 14211456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24229697 - 24229643
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||  |||||||    
T  24229697 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacg 24229643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24874704 - 24874758
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||||||||||||||| | ||||||| || ||||||||||||||    
T  24874704 gttgtatgttattaacttgggtgatgtgaatttgttcacagattcatcctttacg 24874758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25980336 - 25980386
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| ||||||||    
T  25980336 tatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacg 25980386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26825605 - 26825659
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  26825605 gttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 26825659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28540819 - 28540765
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  28540819 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacg 28540765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 41184329 - 41184279
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  41184329 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 41184279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 8096407 - 8096358
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  8096407 tatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttac 8096358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 43148917 - 43148966
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  43148917 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 43148966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8088124 - 8088072
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||||||||| | | |||||||||||| ||||||| |||||    
T  8088124 ttgtatgctattaacttgggtgttatgagtttgttcgcagattcatcttttac 8088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31391666 - 31391614
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| ||||||    
T  31391666 gttgtatgctattaacttggatgttgtgagtttgttcgcaaattcacccttta 31391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 9425374 - 9425327
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||| ||||||||||| |||||| ||||||||||||||||| ||||||    
T  9425374 tatgttattaacttggatgatgtgagtttgttcgcatattcgtccttt 9425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 15710873 - 15710920
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    |||||||||||| ||| || ||| ||||||||||||||||||||||||    
T  15710873 tatgctattaacatggatgttgtgagtttgttcgcatattcatccttt 15710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 3271291 - 3271241
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || | | |||||||||||| ||||||||||||||    
T  3271291 tatgctattaacttggatgttatgagtttgttcgcagattcatcctttacg 3271241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 11768189 - 11768239
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||| ||||| |||||| |||||||||||| ||||||||| ||||    
T  11768189 tatgctattatcttggatgatgtgagtttgttcgcagattcatcctatacg 11768239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15571662 - 15571716
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | |||  |||||||||    
T  15571662 gttgtatgctattaacttgggtgttgtgagtttgttcgtagatttgtcctttacg 15571716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 16981482 - 16981532
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| |||||| |||||||    
T  16981482 tatgctattaacttggatgttgtgagtttgttcgcagattcattctttacg 16981532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19103380 - 19103326
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||| |||| | | |||||||||||| ||||||||| ||||    
T  19103380 gttgtatgctattaactttggtgctatgagtttgttcgcagattcatcctatacg 19103326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 26878014 - 26877968
Alignment:
Q  9 ctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||| || ||| |||||||||||| ||||||||||||||    
T  26878014 ctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 26877968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 27266748 - 27266698
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  27266748 tatgctattaacttggatgctgtgagtttgttcgcagattcatcatttacg 27266698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 445
Target Start/End: Original strand, 32126578 - 32126616
Alignment:
Q  407 tgataagtgccaaatctatttgatttcacatatatattt 445  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  32126578 tgataagtgtcaaatctatttgatttcacctatatattt 32126616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 35475227 - 35475177
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| ||| |||||| ||||||||||||||||    
T  35475227 tatgctattaacttggatgttgtgagtatgttcgtatattcatcctttacg 35475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37986026 - 37985972
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||  |||||| |||||||| ||| ||||||| ||||||    
T  37986026 gttgtatgctattaacttgaatgatgtgagtttgtttgcagattcatcttttacg 37985972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 38007536 - 38007586
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| ||||||||| |||||||| | ||||||    
T  38007536 tatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacg 38007586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2979219 - 2979174
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||    
T  2979219 gttgtatgctattaacttggatgttgtgagtttgttcgcagattca 2979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 4954182 - 4954231
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||| | || ||| ||||||||| ||||||||||||||||    
T  4954182 tatgctattaactttgatgttgtgagtttgttcacatattcatcctttac 4954231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11976844 - 11976795
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||| ||||||||||| || ||| |||||||||||| |||||||||||||    
T  11976844 tatgttattaacttggatgttgtgagtttgttcgcagattcatcctttac 11976795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 19121088 - 19121141
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||| |||||| |||| |||||| |||||||||||| ||||| ||||||||    
T  19121088 ttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacg 19121141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 28235777 - 28235826
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| |||||    
T  28235777 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttac 28235826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 6217075 - 6217119
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||    
T  6217075 ttgtatgctattaacttgagtgctgtgagtttgttcgcagattca 6217119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14082309 - 14082257
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||| | |||||  |||||||||||| ||||| ||||||    
T  14082309 gttgtatgctattaacttcgatgatgggagtttgttcgcagattcacccttta 14082257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 15571097 - 15571141
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcc 49  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||    
T  15571097 tatgctattaacttggatgttgtgagtttgttcgcagattcatcc 15571141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 34881907 - 34881955
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||| || ||| |||||||| ||| ||||||||||||    
T  34881907 tatgctattaacttggatgttgtgagtttgtttgcagattcatccttta 34881955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2520975 - 2521029
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  2520975 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 2521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19853425 - 19853371
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  19853425 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 19853371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29966522 - 29966576
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  29966522 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 29966576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47320325 - 47320271
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||    
T  47320325 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacg 47320271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 53616539 - 53616489
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  53616539 tatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 53616489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 21686153 - 21686101
Alignment:
Q  3 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| ||||||||    
T  21686153 tgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 21686101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9645413 - 9645363
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9645413 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 9645363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 11299919 - 11299869
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| |||||||||||||| ||| |||||||||||| ||||||||||||||    
T  11299919 tatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacg 11299869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 20569457 - 20569507
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| | |||| |||||||||||| ||||||||||||||    
T  20569457 tatgctattaacttggataatgtgagtttgttcgcagattcatcctttacg 20569507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 22301050 - 22301100
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  22301050 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 22301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27652139 - 27652193
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||||| ||||    
T  27652139 gttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctatacg 27652193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31891200 - 31891146
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  31891200 gttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctatacg 31891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 34024327 - 34024277
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  34024327 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 34024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 38706599 - 38706549
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  38706599 tatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacg 38706549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43095824 - 43095878
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||| |||| |||||| |||||||||||| ||||||| ||||||    
T  43095824 gttgtatgctattaatttggatgatgtgagtttgttcgcagattcatcatttacg 43095878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 51318185 - 51318235
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  51318185 tatgctattaacttggatgatgtgagtttgttcacagattcatcctttacg 51318235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 10496534 - 10496583
Alignment:
Q  4 gtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  10496534 gtatgctattaacttgggtgctttgagtttgttcgcagattcatccttta 10496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 56199297 - 56199346
Alignment:
Q  6 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  56199297 atgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 56199346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12493493 - 12493541
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  12493493 tatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 12493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 17949236 - 17949184
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||| |||||||||||||| ||| |||||||||||| ||||| |||||||    
T  17949236 ttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttac 17949184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 17953088 - 17953036
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||| |||||||||||||| ||| |||||||||||| ||||| |||||||    
T  17953088 ttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttac 17953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33921250 - 33921294
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattc 45  Q
    |||||||||||||||||||| || ||| |||||||||||||||||    
T  33921250 gttgtatgctattaacttggatgttgtgagtttgttcgcatattc 33921294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44596856 - 44596900
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattc 45  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  44596856 gttgtatgctattaacttgggtgctgtgagtttgttcgcagattc 44596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 10359437 - 10359394
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatc 48  Q
    |||||||||||||||| |||||| |||||||||||| |||||||    
T  10359437 tatgctattaacttggatgatgtgagtttgttcgcaaattcatc 10359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32766710 - 32766761
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 52  Q
    ||||||||||||||||||||||| ||| ||||||||| || ||||| |||||    
T  32766710 gttgtatgctattaacttgggtgctgtgagtttgttctcagattcacccttt 32766761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 4644058 - 4644108
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| || ||||||||| ||||||||||||||    
T  4644058 tatgctattaacttggatgttgtgagcttgttcgcagattcatcctttacg 4644108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9528766 - 9528716
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||  || ||| |||||||||||| ||||||||||||||    
T  9528766 tatgctattaacttgaatgttgtgagtttgttcgcagattcatcctttacg 9528716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13634311 - 13634365
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| | |||||||| | ||||| ||||||||    
T  13634311 gttgtatgctattaacttgggtgctgtgaatttgttcggagattcaccctttacg 13634365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19896536 - 19896482
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| |||| | |||||||||||| ||||| | ||||||    
T  19896536 gttgtatgctattaacttggatgatatgagtttgttcgcagattcaccatttacg 19896482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22611379 - 22611433
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||| ||||||| ||| |||||||||||| ||||| ||||||||    
T  22611379 gttgtatggtattaaattgggtgctgtgagtttgttcgcagattcaccctttacg 22611433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25274083 - 25274133
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||| | || ||| |||||||||||| ||||||||||||||    
T  25274083 tatgctattaacttagatgttgtgagtttgttcgcagattcatcctttacg 25274133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 28857601 - 28857651
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||  | ||| |||||||||||| ||||||||||||||    
T  28857601 tatgctattaacttggcagctgtgagtttgttcgcagattcatcctttacg 28857651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 35261392 - 35261442
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||| ||| ||||||||||||||    
T  35261392 tatgctattaacttggatgttgtgagtttgtttgcagattcatcctttacg 35261442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 35348507 - 35348557
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  35348507 tatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacg 35348557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43510392 - 43510446
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||  ||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  43510392 gttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 43510446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 44947612 - 44947662
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  44947612 tatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacg 44947662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48257545 - 48257491
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| |  ||| |||||||||||| ||||| ||||||||    
T  48257545 gttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacg 48257491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 49410423 - 49410473
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||| ||||||||||| |||||| |||||||||||  ||||||||||||||    
T  49410423 tatgttattaacttggatgatgtgagtttgttcgctgattcatcctttacg 49410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53811224 - 53811277
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||    
T  53811224 gttgtatgctattaacttgggtgttgtgag-ttgttcgcagattcaccctttacg 53811277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 56040559 - 56040505
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||||||| || ||| |||||| ||||| ||||| ||||||||    
T  56040559 gttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacg 56040505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29960862 - 29960817
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||| |||||||||||| ||| |||||||||||| |||||    
T  29960862 gttgtatgcttttaacttgggtgctgtgagtttgttcgcagattca 29960817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36194904 - 36194949
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||    
T  36194904 gttgtatgctattaacttggatgttgtgagtttgttcgcagattca 36194949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1532108 - 1532156
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||| || ||| || ||||||||| ||||||||||||    
T  1532108 tatgctattaacttggatgttgtgagcttgttcgcagattcatccttta 1532156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 2115477 - 2115429
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    |||||||||||||||| |  ||| |||||||||||| ||||||||||||    
T  2115477 tatgctattaacttggatactgtgagtttgttcgcagattcatccttta 2115429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9178549 - 9178601
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||| |||| || ||||||||||||  |||| ||||||    
T  9178549 gttgtatgctattaacttgtgtgacgtgagtttgttcgcagtttcacccttta 9178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 51888119 - 51888071
Alignment:
Q  6 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||| |||| ||| ||||||||||||||| || |||||||    
T  51888119 atgctattaacttaggtgttgtgagtttgttcgcatatccaccctttac 51888071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 14780 - 14732
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  14780 tatgctattaacttgggtgctgtgagtttgttcgcaaattcatccttta 14732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 50953 - 51005
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  50953 ttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttac 51005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 5586 - 5636
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  5586 tatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacg 5636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 71213 - 71159
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| |||||||||||| | | ||| ||||||||||    
T  71213 gttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacg 71159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 71783 - 71729
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  71783 gttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacg 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 7892 - 7941
Alignment:
Q  2 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctt 51  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||| ||||    
T  7892 ttgtatgttattaacttgggtgttgtgagtttgttcgcatattcaccctt 7941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 26984 - 26936
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 53  Q
    ||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  26984 tatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 26936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1886 - 1832
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||| |||||||||||||| | | |||||||||||| ||||| ||||||||    
T  1886 gttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacg 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 16209 - 16159
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| |||||| |||||||||||  |||| |||||||||    
T  16209 tatgctattaacttggatgatgtgagtttgttcgctgattcttcctttacg 16159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9951 - 9901
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||| ||||||||    
T  9951 tatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacg 9901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 83325 - 83275
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  83325 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacg 83275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 57997 - 57947
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 55  Q
    |||||||||||||||| || ||| |||||||||||| ||| ||||||||||    
T  57997 tatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacg 57947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 15672 - 15713
Alignment:
Q  5 tatgctattaacttgggtgatgtaagtttgttcgcatattca 46  Q
    ||||||||||||||||||| ||| |||||||||||| |||||    
T  15672 tatgctattaacttgggtgctgtgagtttgttcgcagattca 15713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 65955 - 65902
Alignment:
Q  1 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 54  Q
    ||||||||||||||||||| ||| | | |||||||||||| ||||| |||||||    
T  65955 gttgtatgctattaacttgagtgttatgagtttgttcgcagattcaccctttac 65902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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