View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6975_low_14 (Length: 408)
Name: NF6975_low_14
Description: NF6975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6975_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 18 - 390
Target Start/End: Complemental strand, 32364149 - 32363777
Alignment:
| Q |
18 |
atcaactggtagataggttccctatcccgtgtaactagaaatctagaatttcactcaactagaaatctagtgtttacatttattaaatgagtaaattaat |
117 |
Q |
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| T |
32364149 |
atcaactggtagataggttccctatcccgtgtaactagaaatctagaatttcactcaactagaaatctagtgtttacatttattaaatgagtaaattaat |
32364050 |
T |
|
| Q |
118 |
tttgttattttgcagatgatgaggtactcataataaaaagtctgacacacagagaaatcaatgcagttataaaggtgagaatttgttctttgatagatat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32364049 |
tttgttattttgcagatgatgaggtactcataataaaaagtctgacacacagagaaatcaatgcagttataaaggtgagaatctgttctttgatagatat |
32363950 |
T |
|
| Q |
218 |
ttatttgatgccttttggtatataaatttgatgaagatggttgccattgtatacttcctagagttagtttatccacattcttttgcactacctttttatg |
317 |
Q |
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| T |
32363949 |
ttatttgatgccttttggtatataaatttgatgaagatggttgccattgtatacttcctagagttagtttatccacattcttttgcactacctttttatg |
32363850 |
T |
|
| Q |
318 |
cagactctaccaaatccagtctatctctttcaaggtattgtactgcgtcgaggtgccaaaggaactggaatga |
390 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32363849 |
cagactctaccaaatccagtctatctctttcaaggtattgtactgcgtcgaggtgccaaaggaactggaatga |
32363777 |
T |
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