View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6975_low_51 (Length: 206)
Name: NF6975_low_51
Description: NF6975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6975_low_51 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 8526843 - 8527025
Alignment:
| Q |
12 |
atggacatcatcttgatgcagatagaaaacgaggtatgtcacaattatcattgagattatgcttatgcggtggaccccatttatccaatgaatgccctat |
111 |
Q |
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| T |
8526843 |
atggacatcatcttgatgcagatagaaaacgaggtatgtcacaattatcattgagattatgcttatgcggtggaccccatttatccaatgaatgccctat |
8526942 |
T |
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| Q |
112 |
gagagttgccagggcttgtttcctgaaaaaacaatattaaaaatttgctaaaagaaagaataagctctaatagtgatgtccat |
194 |
Q |
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| T |
8526943 |
gagagttgcgagagcttgtttcctgaaaaaacaatattaaaaatttgctaaaagaaagaataagctctaatagtaatgaccat |
8527025 |
T |
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