View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6976_high_9 (Length: 259)
Name: NF6976_high_9
Description: NF6976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6976_high_9 |
 | |
|
| [»] scaffold0127 (1 HSPs) |
| | |
|
| [»] scaffold0410 (1 HSPs) |
| | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
| [»] scaffold0841 (1 HSPs) |
| | |
|
| [»] scaffold0686 (1 HSPs) |
| | |
|
| [»] scaffold1475 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 19361878 - 19361624
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
19361878 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggcttaaagggaggtgg |
19361779 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19361778 |
tgtggtttcctcaactcatggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
19361679 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
19361678 |
atggggtcttcgagtggcttaccactcctaagtgaaacagcattcattttgttgg |
19361624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 23634440 - 23634694
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
23634440 |
atattttgttcatcatatctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggcttaaagggaggtgg |
23634539 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | |
|
|
| T |
23634540 |
tgtgttttcctcaactcgtggttcctctctttctgccctagtttccctagatggtggttcgcagatctctttctcactgtcattggatttggttctcctt |
23634639 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||| ||| |||||| |||| |
|
|
| T |
23634640 |
atggggtcttcgattggcttactactcctaagtgtaacaacatacattttgttgg |
23634694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 23906518 - 23906266
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
23906518 |
atatcttgttcatcatttctatgaactttttgaattgctcatctagctttgatttggcaaacctttgtgggaaggggatttttggtttaaagggaggtgg |
23906419 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||| |||| || ||||||||||| | |
|
|
| T |
23906418 |
tgtgttttcctcaactcgtggttcttctctttctgccctggtttccctagatggtggttcgcatatctctttctcactgtcatcggttttggttctcctt |
23906319 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttatt |
253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23906318 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttatt |
23906266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 208
Target Start/End: Complemental strand, 23882045 - 23881840
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| ||||||||||| || || || || |||||| ||||||||||||| || ||||||||||| ||||| || ||||| || || || |||||||| | |
|
|
| T |
23882045 |
attttattcatcatttcgataaatttcttgaattgcccatctagcttagacttagcaaacctttgcgggaaagggattttcggtttgaaaggaggtggag |
23881946 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctat |
202 |
Q |
| |
|
| ||||||||| | ||| || ||||||||||||| |||||||| || | || | || ||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
23881945 |
tagtttcctcaccatgtgatttttctctttctaccttagtttcctcaacttgcggcttgctaatctctttctcactttcattgggtttggctcttcctat |
23881846 |
T |
|
| Q |
203 |
ggggtc |
208 |
Q |
| |
|
|||||| |
|
|
| T |
23881845 |
ggggtc |
23881840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 15949174 - 15949428
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
15949174 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaaaggaatttttggcttaaagggaggtgg |
15949273 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
15949274 |
tgtggtctcctcaactcgtggttcttctctttctaccctggtttccctagccggtggttcgcagatctctttctcactttcattggatatggttctccct |
15949373 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15949374 |
atggggtcttctagtggcttaccactcctaagtgtaacagcattcattttgttgg |
15949428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 11860334 - 11860080
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| |
|
|
| T |
11860334 |
atatattgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgcgggaagggaatttttggcttaaagggatctgg |
11860235 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
11860234 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttcccttagcggtggttcgcaaatctctttctcactttcattggatttggttatccat |
11860135 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
11860134 |
atggggtctttgagtggcttaccactcctaagtgtaacaatattcattttgttgg |
11860080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 255
Target Start/End: Original strand, 10552406 - 10552657
Alignment:
| Q |
4 |
ttttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtgt |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
10552406 |
ttttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaaggaaatttttggcttaaagggaggtggtgt |
10552505 |
T |
|
| Q |
104 |
ggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctatg |
203 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10552506 |
ggtctcctcaactcgtggttcttctctttctaccctggtttccctaaccggtggttcgcagatctctctctcactttcattggatttggttctccctata |
10552605 |
T |
|
| Q |
204 |
gggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
10552606 |
gggtcttctagtggcttaccactcctaagtataacaacattcattttgttgg |
10552657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 55502487 - 55502233
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
55502487 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtggaaagggaatttttggcttaaagggaggtgg |
55502388 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||||||| ||||| ||||| | |
|
|
| T |
55502387 |
tgtggtttcctcaactcgtggttcttctctttctgccctagtttccctagacggtggttcgcaaatctccttctcatcttcattgggtttggctctcctt |
55502288 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
55502287 |
atgggatcttcgagtggcttaccactcctaagtgtaacaacattcattttgttgg |
55502233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 11942499 - 11942245
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
11942499 |
atattttgttcatcatctctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaattttcggcttaaagggaggtgg |
11942400 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||| |||||||||| ||| ||||||||||||||||||| | |
|
|
| T |
11942399 |
tgtgttttcctcaactcgtggttcctctctttctgccctagtttccctagatggtggtttgcagatctctttctgactatcattggatttggttctcctt |
11942300 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
| |||||||||||||||||| ||||||||| |||||||| |||||||||| |||| |
|
|
| T |
11942299 |
acggggtcttcgagtggcttgccactcctacgtgtaacaacattcattttgttgg |
11942245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 15562080 - 15562334
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
15562080 |
atatcttgttcatcatctctatgaactttttgaattgctcatcgagctttgatttggcaaacctttgtgggaaggggatttttggcttaaagggaggtgg |
15562179 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |||| ||||||||| ||||||| || || ||||||||||| ||||||| | || | ||| | |
|
|
| T |
15562180 |
tgtgttttcctcaactcgtggttcctctctttctgccctggtttccctagatggtggttggcggatttctttctcactgtcattggtctcggctgtcctt |
15562279 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15562280 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
15562334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 37937493 - 37937239
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
37937493 |
atatcttgttcatcatctctatgaactttttgaattgctcatctagctttgatttggcaaacctttgagggaaggggatttttggcttaaagggaggtgg |
37937394 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
| |||||||||||||||||| ||||||||| | || ||||||||| ||||||||||| || ||||||||||| | || || | |||||||| | |
|
|
| T |
37937393 |
caagttttcctcaactcgtggtttctctctttctgctctggtttccctagatggtggttcgcagatttctttctcactgttatcggtctcggttctcctt |
37937294 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37937293 |
atggggtcttcgagtggcttaccactcctaagtgtgacagcattcattttattgg |
37937239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 1209852 - 1209995
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| ||||||||||| || || || || ||||| ||||||||||||| || ||||||||||||||||| || |||||||| || || |||||||| | |
|
|
| T |
1209852 |
attttattcatcatttcgataaatttcttgaattgtccatctagcttagacttagcaaacctttgtgggaaagggatttttggtttgaaaggaggtggag |
1209951 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttcc |
146 |
Q |
| |
|
| ||||||||| ||| || |||||||||||||||||||||| |
|
|
| T |
1209952 |
tagtttcctcattatgtgatttttctctttctaccctagtttcc |
1209995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 13053753 - 13053515
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| ||||||||||| || || || || |||| | ||||||||||||| || ||||| ||||| ||||| || |||||||| || || |||||||| | |
|
|
| T |
13053753 |
attttattcatcatttcaataaatttgttgaatttcccatctagcttagacttagcaaatctttgcgggaaagggatttttggtttgaacggaggtgggg |
13053654 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctat |
202 |
Q |
| |
|
| ||||||||| | || |||||||||||| |||| ||| |||| | || ||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
13053653 |
tagtttcctcacca---------tccttttctaccctagcttccttaacttgtggattgctaatctctttctcactttcattgggtttggctcttcctat |
13053563 |
T |
|
| Q |
203 |
ggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
|| ||| | | ||| |||||||||||||||| || || |||||||| |
|
|
| T |
13053562 |
ggtgtcctttaatggtctaccactcctaagtgtgacggcgttcatttt |
13053515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 11926304 - 11926558
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || || |||||||| |
|
|
| T |
11926304 |
atattttgttcatcatttctatgaactttttaaattgctcatctagtttagatttggcaaacctttgtgggaatggaatttttggcttgaaaggaggtgg |
11926403 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| | |
|
|
| T |
11926404 |
tgtggtctcctcagctcgtggttcttctctttcttccctagtttccctagacggtggttcgcaaacttctttctcactctcattggatttggttctcctt |
11926503 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
11926504 |
atggggtcttcgagtggcttaccactcctaagtgtaacaacattcattttgttgg |
11926558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 23463301 - 23463048
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
23463301 |
atatcttgttcatcatctctatgaattttttgaatttctcatctagctttgatttggcaaacctttgtgggaaggggatttttggcttaaagggaggtgg |
23463202 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| |||| | ||||||| |||||||||| || ||||||||||| | ||| | | |||||||| | |
|
|
| T |
23463201 |
cgtgttttcctcaactcgtggttcctctctttctgccct-ggttccctagatggtggttcgcggatttctttctcactgttatttgtctcggttctcctt |
23463103 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23463102 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
23463048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 23294814 - 23295061
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| |||| ||||| || ||||| |||||||||||| |||||||||| || ||||||||||||||||| ||||| ||||| ||||| || || || | |
|
|
| T |
23294814 |
attttattcaccattttgataaacttcttaaattgctcaactagcttagacttagcaaacctttgtgggaaaggaatctttggtttaaaagggggcggcg |
23294913 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctat |
202 |
Q |
| |
|
||||||| | || |||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| | || || | ||| | | |||| |
|
|
| T |
23294914 |
aagtttccttaccttgtggtttttcgctttctaccctagtttccccaacttgtggttcgcaaatctctttctcaatctccttaggtttagcctttcctac |
23295013 |
T |
|
| Q |
203 |
ggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
|||||| || ||| || ||||| ||||||||||||| |||||||||| |
|
|
| T |
23295014 |
ggggtcctctagttgcctaccattcctaagtgtaacgacattcatttt |
23295061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 15695752 - 15695498
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||| |
|
|
| T |
15695752 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtggaaaagggatttttggtttaaagggaggtgg |
15695653 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||| | |
|
|
| T |
15695652 |
ggtgttttcctcaactcgtggttcttctctttctgccctagtttcccttgatggtggttcgcagatctctttctcactgtcattggattcggttctcctt |
15695553 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15695552 |
atgggatcttcgagtggcttaccactcctaagtgtaacagcattcattttgttgg |
15695498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 15848871 - 15849125
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||| | ||||| || ||||||||||| || |
|
|
| T |
15848871 |
atatcttgttcatcatttctatgaactttttgaattgctcatctagctttgatttggaaaacctttgtggaaagcggattttcggtttaaagggaggcgg |
15848970 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||| ||||||||||| ||||||| ||||||||||| | |
|
|
| T |
15848971 |
tgtgttttcctcaactcgtggttcttctctttctgccctggtttcgctagatggtggttcgcaaatttctttctcactgtcattggttttggttctcctt |
15849070 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
15849071 |
atggggtcttcgagtggcttaccactcctaagtgtgacaacattcattttattgg |
15849125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 22238893 - 22238639
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| || | |
|
|
| T |
22238893 |
atatcttgttcatcatctccatgaattttttgaattgctcatctagctttgatttggcaaacctttgtgggaaggggatttttggcttaaaggggggcgt |
22238794 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |||| ||||||||| ||||| || | |||||||||||||| | || || | |||||||| | |
|
|
| T |
22238793 |
tgtgttttcctcaactcgtggttcctctctttcttccctggtttccctagttggtggctcacggatctctttctcactgtgatcggtctcggttctcctt |
22238694 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22238693 |
atggggtcttcgagtggctttccactcctaagtgtaacagcattcattttattgg |
22238639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 25784134 - 25784381
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggatta-aagggaggtggt |
101 |
Q |
| |
|
||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | || ||||| || ||||||||| |
|
|
| T |
25784134 |
attttattcatcatttcaataaactttttaaattgctcatctagcttagaattggcaaacctttgtgggaaaggaa-tcttcgattataaaggaggtggt |
25784232 |
T |
|
| Q |
102 |
gtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctcccta |
201 |
Q |
| |
|
|| ||||||||| || |||||| | |||||||||||||||||||| || |||| |||| ||||||||||||| ||||||||| ||||| ||| |||| |
|
|
| T |
25784233 |
gtagtttcctcaccttgtggttttcctctttctaccctagtttcctcaacttgtggctcgctaatctctttctcaatttcattgggtttggctcttccta |
25784332 |
T |
|
| Q |
202 |
tggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
25784333 |
tggggttctctagtggcctaccactcctaagtgtaacatcattcatttt |
25784381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 19968266 - 19968492
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| ||||||||||| || || || || |||||| ||||||||||||| || ||||||||||| ||||| || |||||||| || || |||||||| | |
|
|
| T |
19968266 |
attttattcatcatttcaataaatttcttgaattgcccatctagcttagacttagcaaacctttgcgggaaagggatttttggtttgaacggaggtgggg |
19968365 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctat |
202 |
Q |
| |
|
||||||||||| | |||||||||| ||||| |||| ||| |||| |||| ||||||||||||||||||||||| ||| | ||| ||||| |
|
|
| T |
19968366 |
tggtttcctca---------ccatctctttctaacctagcttccttaactcgtggctcgctaatctctttctcactttcattgggtttcgctcttcctat |
19968456 |
T |
|
| Q |
203 |
ggggtcttcgagtggcttaccactcctaagtgtaac |
238 |
Q |
| |
|
|| ||| || | ||| |||||||||||||||||||| |
|
|
| T |
19968457 |
ggtgtcctctaatggtttaccactcctaagtgtaac |
19968492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 25616949 - 25616829
Alignment:
| Q |
126 |
tctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctatggggtcttcgagtggcttaccac |
225 |
Q |
| |
|
|||||||||||||||| |||| ||| |||| | || || |||||||||||||||||||| ||||| ||| ||||||| ||| || | ||| |||||| |
|
|
| T |
25616949 |
tctctttctaccctagcttccttaacttgtggcttgctaacctctttctcactttcattgggtttggctcttcctatggtgtcctctaatggtctaccac |
25616850 |
T |
|
| Q |
226 |
tcctaagtgtaacagcattca |
246 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
25616849 |
tcctaagtgtaacggcattca |
25616829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 10645486 - 10645232
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
10645486 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttgacaaacctttatgggaagggaatttttggcttaaagggaggtgg |
10645387 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | |
|
|
| T |
10645386 |
ggtgttttcctcgactcgtggttcttctctttctgccctggtttccctagatggtggttcgcagatctctttctcactgtcattggatttggttctcctt |
10645287 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| |
|
|
| T |
10645286 |
atggggtcttcgagtggcttaccactcctaagtgtaacaacattcagtttgttgg |
10645232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 18244399 - 18244275
Alignment:
| Q |
126 |
tctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctatggggtcttcgagtggcttaccac |
225 |
Q |
| |
|
|||||||||||||||| |||| ||| |||| | || || || ||||||||||| ||||| |||| ||| ||||| | ||| || | ||| || ||| |
|
|
| T |
18244399 |
tctctttctaccctagcttccttaacttgtggcttgctaacctttttctcactttaattggggttggctcttcctatagtgtcctctaatggtctatcac |
18244300 |
T |
|
| Q |
226 |
tcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
||||||||||||| ||||||||||| |
|
|
| T |
18244299 |
tcctaagtgtaactgcattcatttt |
18244275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 21028493 - 21028239
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21028493 |
atattttgttcatcatttctatgaactttttgaattgctcatctagctttgatttggcaaacctttgtgggaagggaatttttggcttaaagggaggtgg |
21028394 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||| |||| || ||||||||||| | |
|
|
| T |
21028393 |
tgtgttttcctcaactcgtggttcttctctttctgccctggtttccctagatggtggttcgcagatctctttctcactgtcatcggttttggttctcctt |
21028294 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| |
|
|
| T |
21028293 |
atggggtcttcgagtggcttaacactcctaagtgtaacaacattcattttgttgg |
21028239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 22660162 - 22659910
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
22660162 |
atatcttgttcatcatttctatgaactttttgaattgctcatctagctttgatttggcaaacctttgtgggaaggggatttttggtttaaagggaggtgg |
22660063 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||| || |||| || |||||||| || | |
|
|
| T |
22660062 |
tgtgtttttctcaactcgtggttcttctctttctgccctggtttccctagatggtggttcgcagctctctttctctctgtcatcggttttggttcccctt |
22659963 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttatt |
253 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22659962 |
acggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttatt |
22659910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 17585487 - 17585233
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| ||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
17585487 |
atatcttgttcatcatctctatgaattttttgaattgctcatctagctttgatttggcaaacctttgagggaaggggatttttggcttaaagggaggtgg |
17585388 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| | || ||||||||| |||||||||| || ||||||||||| | || || | |||||||| | |
|
|
| T |
17585387 |
cgtgttttcctcaactcgtggttcctctctttctgctctggtttccctagatggtggttcgcggatttctttctcactgttatcggtctcggttctcctt |
17585288 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17585287 |
atggggtcttcgagtggcttaccactcctaagtgtgacagcattcattttattgg |
17585233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 23631917 - 23631679
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| ||||||||||| || | || || |||||| ||||||| ||||| || ||||||||||| ||||| | |||||||| || || |||||||| | |
|
|
| T |
23631917 |
attttattcatcatttcgataattttcttgaattgcccatctagtttagacttagcaaacctttgcgggaaagagatttttggtttgaatggaggtgggg |
23631818 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctat |
202 |
Q |
| |
|
| ||||||||| | ||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
23631817 |
tcgtttcctcacca---------tctctttctacccaagtttcctcaacttgtggctcgcaaatctctttctcactttcattgggtttggctcttcctat |
23631727 |
T |
|
| Q |
203 |
ggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
|||||| || || || ||||||||||||||||||| ||||||||||| |
|
|
| T |
23631726 |
ggggtcctctagcggtctaccactcctaagtgtaacggcattcatttt |
23631679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 24021521 - 24021592
Alignment:
| Q |
31 |
taaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||||||||||||| |||||| || ||||||||||||||||| |||||||||| ||| | || ||||||| |
|
|
| T |
24021521 |
taaattgctcatctaacttagacttagcaaacctttgtgggaaatgaatttttggcttacatggtggtggtg |
24021592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 4888 - 5139
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaattttt-ggattaaagggaggtg |
99 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
4888 |
atatcttgttcatcatttctatgaactttttgaattgctcatctagctttgatttggcaaacctttgtgggaaggtaattttttggcttaaagggaggtg |
4987 |
T |
|
| Q |
100 |
gtgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccc |
199 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||| |||| || ||||||||||| |
|
|
| T |
4988 |
gtgtgttttcctcaactcgtggttcttctctttctaccctggtttccctagatggtggttcgcagacttctttctcactgtcatcggttttggttctcct |
5087 |
T |
|
| Q |
200 |
tatggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttta |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5088 |
tatggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttta |
5139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 17099737 - 17099991
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
17099737 |
atattttgttcatcatctccatgaactttttgaattgctcatcgagctttgatttggcaaacctttgtgggaaggggatttttggcttaaagggaggtgg |
17099836 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||| || ||||||||||| ||||||| | |||||||| | |
|
|
| T |
17099837 |
cgtgttttcctcaactcgtggttcctctctttctgccctggtttccctagatggtggttcgcggatttctttctcactgtcattggtctcggttctcctt |
17099936 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17099937 |
atggggtcttcgagtggcttaccactcctaagtgtaacaacattcattttattgg |
17099991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 20401906 - 20401652
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||| ||||||||||| || ||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
20401906 |
atatcttgttcatcatctccatgaattttttgaattgctcatctagttttgatttggcaaacctttgtgggaagggaatttttggcttaaagggaggtgt |
20401807 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccct |
200 |
Q |
| |
|
|||| || |||||||||||||||| ||| ||||| |||| ||||||||| ||||| |||| |||||||||||||| | || || | |||||||| | |
|
|
| T |
20401806 |
tgtgtttccctcaactcgtggttcctctttttctgccctggtttccctagatggtggctcgcggatctctttctcactgtgatcggtctcggttctcctt |
20401707 |
T |
|
| Q |
201 |
atggggtcttcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20401706 |
atggggtcctcgagtggcttaccactcctaagtgtaacagcattcattttattgg |
20401652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 26195468 - 26195396
Alignment:
| Q |
31 |
taaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtgt |
103 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||| | ||| | ||||||||| ||| | || |||||||| |
|
|
| T |
26195468 |
taaattgctcatctaacttagacttggcaaacctttgcgagaaagaaatttttggcttataagggggtggtgt |
26195396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0410 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0410
Description:
Target: scaffold0410; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 13163 - 12914
Alignment:
| Q |
1 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
13163 |
atattttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggggtttttggcttaaagggaggtgg |
13064 |
T |
|
| Q |
101 |
tgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagc-ggtggttcgcaaatctctttctcactttcattggatttggttctccc |
199 |
Q |
| |
|
||| |||| |||||||||| || |||||||||||||||||||| ||| ||| | || ||| ||||||||||||||||||||| || ||||||||| || |
|
|
| T |
13063 |
tgtactttcatcaactcgtgttttttctctttctaccctagttt-cctcagcttgcggctcgtaaatctctttctcactttcatcgggtttggttcttcc |
12965 |
T |
|
| Q |
200 |
tatggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
| ||| ||| | ||||||||||||||||||||||| | | |||||||||| |
|
|
| T |
12964 |
tttggagtcctttagtggcttaccactcctaagtgtgataacattcatttt |
12914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 100 - 250
Target Start/End: Complemental strand, 108955 - 108805
Alignment:
| Q |
100 |
gtgtggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccc |
199 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| || |||||||||||||| |||| || ||||||||||| |
|
|
| T |
108955 |
gtgtgttttcctcaactcgtggttcttctctttctgccctggtttccctagatggtggttcacagatctctttctcactatcatcggttttggttctcct |
108856 |
T |
|
| Q |
200 |
tatggggtcttcgagtggcttaccactcctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
108855 |
tatggggtcttcgagtggcttaccactcctaagtgtaacaacattcatttt |
108805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0841 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0841
Description:
Target: scaffold0841; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 1300 - 1514
Alignment:
| Q |
27 |
tttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtgtggtttcctcaactcgtggttctt |
126 |
Q |
| |
|
||||| |||||| ||||||||||||| || ||||||||||||||||| || |||||||| || || |||||||| || ||||||||| | | |
|
|
| T |
1300 |
tttttgaattgcccatctagcttagacttagcaaacctttgtgggaaagggatttttggtttgaacggaggtggggtagtttcctca---------ccat |
1390 |
T |
|
| Q |
127 |
ctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctatggggtcttcgagtggcttaccact |
226 |
Q |
| |
|
||||||||||||||| |||| ||| ||| | || ||||||||||||||||||||||| || | ||| ||||||| ||| || | ||| ||||||| |
|
|
| T |
1391 |
ctctttctaccctagcttccttaacttatggcttgctaatctctttctcactttcattggggttagctcttcctatggtgtcctctaatggtctaccact |
1490 |
T |
|
| Q |
227 |
cctaagtgtaacagcattcatttt |
250 |
Q |
| |
|
||||||||| || ||||||||||| |
|
|
| T |
1491 |
cctaagtgtgacggcattcatttt |
1514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0686 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0686
Description:
Target: scaffold0686; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 3410 - 3184
Alignment:
| Q |
3 |
attttgttcatcatttctatgaactttttaaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtg |
102 |
Q |
| |
|
||||| ||||||||||| || || || || |||||| |||||||| |||| || ||||||||||| |||| || |||||| | || || |||||||| | |
|
|
| T |
3410 |
attttattcatcatttcaataaatttcttgaattgcccatctagcatagacttagcaaacctttgcaggaaagggattttttgtttgaacggaggtgggg |
3311 |
T |
|
| Q |
103 |
tggtttcctcaactcgtggttcttctctttctaccctagtttccctaagcggtggttcgcaaatctctttctcactttcattggatttggttctccctat |
202 |
Q |
| |
|
| ||||||||| || |||||||||||||||| |||| ||| |||| |||| |||||||||||||| |||||||| ||||||||| ||||| |
|
|
| T |
3310 |
tagtttcctca-cta--------tctctttctaccctagcttccttaacttgtggctcgctaatctctttctcaccttcattgggtttggttcttcctat |
3220 |
T |
|
| Q |
203 |
ggggtcttcgagtggcttaccactcctaagtgtaac |
238 |
Q |
| |
|
|| ||| || | ||| ||||||||||||||||||| |
|
|
| T |
3219 |
ggtgtcctctaatggtctaccactcctaagtgtaac |
3184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1475 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1475
Description:
Target: scaffold1475; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 1758 - 1725
Alignment:
| Q |
222 |
ccactcctaagtgtaacagcattcattttattgg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
1758 |
ccactcctaagtgtaacagcattcattttgttgg |
1725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 32801 - 32874
Alignment:
| Q |
31 |
taaattgctcatctagcttagatttggcaaacctttgtgggaagggaatttttggattaaagggaggtggtgtg |
104 |
Q |
| |
|
||||||||||||||| |||||| || ||||||||| |||||| ||||||||| | ||| | || ||||||||| |
|
|
| T |
32801 |
taaattgctcatctaacttagacttaacaaacctttatgggaaaggaattttttgcttatatggtggtggtgtg |
32874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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