View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6978_high_21 (Length: 354)
Name: NF6978_high_21
Description: NF6978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6978_high_21 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 298; Significance: 1e-167; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 332
Target Start/End: Original strand, 2006508 - 2006821
Alignment:
| Q |
19 |
gataggtggatttttcatctaaccaaaagatctatcaaagagcttgtgctgcaaatatctgaacgaaaaccgtataagataccttggtgcttattttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2006508 |
gataggtggatttttcatctaaccaaaagatctatcaaagagcttgtgctgcaaatatccgaacgaaaattgtataagataccttggtgcttattttctt |
2006607 |
T |
 |
| Q |
119 |
gtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaacttaaaaagtcttgatttggatcatgt |
218 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2006608 |
gtcaaagtttacatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaacttaaaaagtcttgatttggatcatgt |
2006707 |
T |
 |
| Q |
219 |
tagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacatt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2006708 |
tagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacatt |
2006807 |
T |
 |
| Q |
319 |
cacgcaccaaatct |
332 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2006808 |
cacgcaccaaatct |
2006821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 19 - 332
Target Start/End: Original strand, 2012001 - 2012314
Alignment:
| Q |
19 |
gataggtggatttttcatctaaccaaaagatctatcaaagagcttgtgctgcaaatatctgaacgaaaaccgtataagataccttggtgcttattttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| | || || | |||||||||||||||||||||||||||| |
|
|
| T |
2012001 |
gataggtggatttttcatctaaccagaaggtctatcaaagagcttgtgctgggattatcgataggacaatcatataagataccttggtgcttattttctt |
2012100 |
T |
 |
| Q |
119 |
gtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaacttaaaaagtcttgatttggatcatgt |
218 |
Q |
| |
|
||||||| ||| || |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| | | | || |
|
|
| T |
2012101 |
gtcaaagcttacattatctaacattattttcttgtttgcttaaacctccatcgatgattgaaggcttgaagaacttgaaaagtctttatttagttaaagt |
2012200 |
T |
 |
| Q |
219 |
tagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacatt |
318 |
Q |
| |
|
|| || ||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||| |||| ||||||||||||||||||||| |
|
|
| T |
2012201 |
tactatttctcaagatgcttttgagagtttgatatctagttgccctctgcttgaaaaattgatgttggcagaatttgacggtttcacccaaataaacatt |
2012300 |
T |
 |
| Q |
319 |
cacgcaccaaatct |
332 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2012301 |
cacgcaccaaatct |
2012314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 22 - 332
Target Start/End: Original strand, 2019807 - 2020117
Alignment:
| Q |
22 |
aggtggatttttcatctaaccaaaagatctatcaaagagcttgtgctgcaaatatctgaacgaaaaccgtataagataccttggtgcttattttcttgtc |
121 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||| ||||||||| ||| || || || || | ||||||||||||||||||||||||||||||| |
|
|
| T |
2019807 |
aggtggatttttcatctaaccaggaggtctatcaaagatcttgtgctgggaatctcaaaaggacaatcatataagataccttggtgcttattttcttgtc |
2019906 |
T |
 |
| Q |
122 |
aaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaacttaaaaagtcttgatttggatcatgttag |
221 |
Q |
| |
|
|||| ||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||| ||| |
|
|
| T |
2019907 |
aaagcttacttcatctaagtttatcttattgtttgcttaaacctccatcgacgattgaaggctttaagaacttgaaaagtcttaagttggatcacattac |
2020006 |
T |
 |
| Q |
222 |
catgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacattcac |
321 |
Q |
| |
|
|||||||| ||| |||||||| |||||||||| |||||||||||||||||| |||| ||||| ||| ||||||||||||| |||||||||||||| |
|
|
| T |
2020007 |
tatgtctcaagatgattttgagattttgatatctggttgccctctgcttgaaagattgatattgattgaatttgatggtttcacaaaaataaacattcac |
2020106 |
T |
 |
| Q |
322 |
gcaccaaatct |
332 |
Q |
| |
|
||||||||||| |
|
|
| T |
2020107 |
gcaccaaatct |
2020117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 332
Target Start/End: Original strand, 2010591 - 2010904
Alignment:
| Q |
19 |
gataggtggatttttcatctaaccaaaagatctatcaaagagcttgtgctgcaaatatctgaacgaaaaccgtataagataccttggtgcttattttctt |
118 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||||||| |||||||| | |||| || || || ||||||||||||||||||||||||||||||||| |
|
|
| T |
2010591 |
gataggtagatttttcatctaaccagaaggtctatcaaaaagcttgtgattgaaatctcgaaaggacaaccgtataagataccttggtgcttattttctt |
2010690 |
T |
 |
| Q |
119 |
gtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaacttaaaaagtcttgatttggatcatgt |
218 |
Q |
| |
|
||||||| ||| |||||||| |||| |||| |||||||||||||||||||||| |||| |||||| |||||||| ||||||||||| |||||||| | |
|
|
| T |
2010691 |
gtcaaagcttacttcatctaagtttatcttatggtttgcttaaacctccatcgacaattgtaggctttaagaacttgaaaagtcttgagttggatcactt |
2010790 |
T |
 |
| Q |
219 |
tagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacatt |
318 |
Q |
| |
|
|| |||||||| ||||||||||||||||| ||| | |||||||| |||||||||| |||| ||| ||| |||| |||||||| ||||||||||| |
|
|
| T |
2010791 |
tactatgtctcaagatgcttttgagaatttgttatttggttgccctttgcttgaaaaattgatattcgatgaatttgagggtttcacaaaaataaacatt |
2010890 |
T |
 |
| Q |
319 |
cacgcaccaaatct |
332 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2010891 |
aacgcaccaaatct |
2010904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 3361847 - 3361962
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaaga |
190 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||| ||||| || |||| | | |||| ||||||||||||| | ||| |||||||||| |||| |
|
|
| T |
3361847 |
tataagatcccttggtgcttattctcttgtcaaagtttacatcatttagaattaaaatgctgttggcttaaacctccaacaacgtttgaaggcttcaaga |
3361946 |
T |
 |
| Q |
191 |
acttaaaaagtcttga |
206 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
3361947 |
acttgaaaagtcttga |
3361962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 286
Target Start/End: Complemental strand, 6601675 - 6601480
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaaga |
190 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| ||||| ||||| || ||||| | | |||| ||||| ||| ||||| || || |||| || | || |
|
|
| T |
6601675 |
tataaaataccttcatgcttattttcttgtcaaggtttacatcatttagaattatttaactgttggcttataccaccatcaacatttcaaggattcagga |
6601576 |
T |
 |
| Q |
191 |
acttaaaaagtcttgatttggatcatgttagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattga |
286 |
Q |
| |
|
|||| || ||||||||| || | ||||||| | ||||||| |||||||||| || |||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
6601575 |
acttgaagagtcttgatctgcaacatgttaccttgtctcaagatgcttttgaaaacttgatatctacttgccctttgcttgaacgattgacattga |
6601480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 3341385 - 3341484
Alignment:
| Q |
233 |
atgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacattcacgcaccaaatct |
332 |
Q |
| |
|
|||||||||| || |||||||||| ||||| || |||||| | |||||||||| |||| |||||||||| || || || || ||||| ||||||||||| |
|
|
| T |
3341385 |
atgcttttgaaaacatgatatctagctgccccctacttgaagaattgacattgaaagaaattgatggtttaacacagattaatattcatgcaccaaatct |
3341484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 332
Target Start/End: Complemental strand, 4334898 - 4334664
Alignment:
| Q |
98 |
taccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaacttaaa |
197 |
Q |
| |
|
|||||||||| ||||| || |||||||||||| || | ||| |||| || |||||||||||||||||| ||| | |||||||||| | ||||| || |
|
|
| T |
4334898 |
taccttggtgtttattctcatgtcaaagtttacattctttaaaattaaatgggtgtttgcttaaacctccaacgatgtttgaaggctttagaaacttgaa |
4334799 |
T |
 |
| Q |
198 |
aagtcttgatttggatcatgttagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgat |
297 |
Q |
| |
|
|||||||||| | || || | || ||| |||||||||| || || || ||||| ||||| |||||||||| |||| ||||| |||| || || |
|
|
| T |
4334798 |
aagtcttgatctatgtctagtgaatattgttcaagatgcttttgaaaactttatctctaggtgccccttgcttgaaaagttgagattgagagaattttat |
4334699 |
T |
 |
| Q |
298 |
ggtttcacccaaataaacattcacgcaccaaatct |
332 |
Q |
| |
|
||||| || ||||| || ||||| ||||||||||| |
|
|
| T |
4334698 |
ggtttaacgcaaattaatattcatgcaccaaatct |
4334664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 3378863 - 3378976
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaaga |
190 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||||||| |||| ||| ||||||| |||| |||||||||||| | | |||||||||| |||| |
|
|
| T |
3378863 |
tataagataacatggtgcttattctcttgtcaaagtttacgtcatttaagcttatattgttgtcgacttaaacctccaacaatatttgaaggcttcaaga |
3378962 |
T |
 |
| Q |
191 |
acttaaaaagtctt |
204 |
Q |
| |
|
| || ||||||||| |
|
|
| T |
3378963 |
atttgaaaagtctt |
3378976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 335
Target Start/End: Original strand, 3379027 - 3379114
Alignment:
| Q |
248 |
tgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacattcacgcaccaaatctgaa |
335 |
Q |
| |
|
|||||||| | |||||||| |||||| ||||| ||||| ||| ||||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
3379027 |
tgatatctggctgccctctacttgaagatttggcattgttggaagttgatggtttcacacaaattaatgctcacgcaccaaatctgaa |
3379114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 4322873 - 4322774
Alignment:
| Q |
233 |
atgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacattcacgcaccaaatct |
332 |
Q |
| |
|
|||||||||| || ||||||| | ||||| |||||||||| ||| |||||||||| |||||||||| |||||||| || || || ||||||||||| |
|
|
| T |
4322873 |
atgcttttgaaaacatgatatccaaatgccccttgcttgaaaagatgaaattgacagaagttgatggtttaacccaaattaatatccatgcaccaaatct |
4322774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 332
Target Start/End: Original strand, 20953124 - 20953362
Alignment:
| Q |
94 |
aagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaact |
193 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||| | | |||| ||| |||| |||||||||||| ||||| |||||||||| |||| | |
|
|
| T |
20953124 |
aagataccttggtgcttattctcttgtcaaagtttacatcatttgaaattacattggtgttgtcttaaacctccaacgacgtttgaaggctttaagaggt |
20953223 |
T |
 |
| Q |
194 |
taaaaagtcttgatttggatcatgttagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaact |
293 |
Q |
| |
|
| || ||||||||| || ||| || | || |||| |||||||||| || ||||| ||| | ||||||||||||||||| |||| ||||| |||| | |
|
|
| T |
20953224 |
tgaagagtcttgatctgaatctagtaacagtggctcaagatgcttttgaaaacttgatctctggctgccctctgcttgaaaaattgaaattgatagaagt |
20953323 |
T |
 |
| Q |
294 |
tgatggtttcacccaaataaacattcacgcaccaaatct |
332 |
Q |
| |
|
|||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
20953324 |
tgatggtttcacccaaattaatattcgtgcaccaaatct |
20953362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 311
Target Start/End: Original strand, 20934586 - 20934803
Alignment:
| Q |
94 |
aagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaact |
193 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||| | | |||| ||| |||| |||||||||||| || | || ||||||| | || || |
|
|
| T |
20934586 |
aagataccttggtgcttattctcttgtcaaagtttacatcatttgaaattacatttctgttgtcttaaacctccaacgttgtttaaaggctttaggagct |
20934685 |
T |
 |
| Q |
194 |
taaaaagtcttgatttggatcatgttagca-tgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaac |
292 |
Q |
| |
|
| |||||||||||| || |||||| ||||| || |||| |||||||||| || ||||||||| | ||||| ||||||||||| |||| |||||| ||| |
|
|
| T |
20934686 |
tgaaaagtcttgatctgaatcatg-tagcagtggctcaagatgcttttgaaaacttgatatctggctgccccctgcttgaaaaattgaaattgaccgaag |
20934784 |
T |
 |
| Q |
293 |
ttgatggtttcacccaaat |
311 |
Q |
| |
|
||| ||| ||| ||||||| |
|
|
| T |
20934785 |
ttggtggcttcgcccaaat |
20934803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 309
Target Start/End: Original strand, 20927202 - 20927417
Alignment:
| Q |
94 |
aagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaagaact |
193 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||| ||| |||| ||| |||| |||||||||||| ||||| ||||| |||| |||| | |
|
|
| T |
20927202 |
aagataccttggtgcttattctcttgtcaaagtttacatcatttaaaattacattggtgttgtcttaaacctccaacgacgtttgaaagctttaagagtt |
20927301 |
T |
 |
| Q |
194 |
taaaaagtcttgatttggatcatgttagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaact |
293 |
Q |
| |
|
| || ||||||||| || ||| || | || |||| ||| ||| || |||||||||||| | ||||| ||||||||||| || | ||| |||||| | |
|
|
| T |
20927302 |
tgaagagtcttgatctgaatctagtaacagtggctcaaaatgatttcgaaaatttgatatctggctgccccctgcttgaaaaatttaaattcacagaagt |
20927401 |
T |
 |
| Q |
294 |
tgatggtttcacccaa |
309 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
20927402 |
tgatggcttcacccaa |
20927417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 320
Target Start/End: Original strand, 20923606 - 20923835
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaaga |
190 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||| ||||| ||| || | || || || ||||||||||||| ||| | |||||||||| | || |
|
|
| T |
20923606 |
tataacataccttggtgcttattctcttgtcaaagtttacatcatttaaatttgttttgttcttcgcttaaacctccagcgatgtttgaaggcttcatga |
20923705 |
T |
 |
| Q |
191 |
acttaaaaagtcttgatttggatcatgttagcatgtctcagtatgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacaga |
290 |
Q |
| |
|
|||| ||||||||| | ||||| || |||| || || | |||||||||| || ||||||||| | | |||| |||||||||| ||| |||| | | |
|
|
| T |
20923706 |
acttgaaaagtcttcaattggaacaagttacagtggctaaagatgcttttgaaaacttgatatctggctcccctttgcttgaaaaattggttttgaaaaa |
20923805 |
T |
 |
| Q |
291 |
acttgatggtttcacccaaataaacattca |
320 |
Q |
| |
|
| ||||||| ||||| ||||| |||||||| |
|
|
| T |
20923806 |
agttgatggattcactcaaattaacattca |
20923835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 39274324 - 39274425
Alignment:
| Q |
234 |
tgcttttgagaatttgatatctagttgccctctgcttgaaaatttgacattgacagaacttgatggtttcacccaaataaacattcacgcaccaaatctg |
333 |
Q |
| |
|
||||||||| || ||||||| | |||||||| |||||| |||||| |||| ||||| ||||||||| |||||| | || ||||| |||||||||||| |
|
|
| T |
39274324 |
tgcttttgaaaaaatgatatccggctgccctctacttgaatatttgagtttgatagaacctgatggtttaacccaagttaatattcatgcaccaaatctg |
39274423 |
T |
 |
| Q |
334 |
aa |
335 |
Q |
| |
|
|| |
|
|
| T |
39274424 |
aa |
39274425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 39274181 - 39274218
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagttt |
128 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
39274181 |
tataagataccttggtgcttattctcctgtcaaagttt |
39274218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 17969990 - 17970084
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggctt |
185 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||| ||| |||| | |||||||||| ||||| ||| ||| | || ||||||| |
|
|
| T |
17969990 |
tataagataccttggtgcttattttcttatcaaagtttacatcatttaaaattaagtcattgtttgctgaaacccccaacgatgtttaaaggctt |
17970084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 21237664 - 21237777
Alignment:
| Q |
91 |
tataagataccttggtgcttattttcttgtcaaagtttagatcatctaacattatattattgtttgcttaaacctccatcgacgattgaaggcttgaaga |
190 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||| || |||| ||||| ||||||||||||| | ||| |||||||||| | || |
|
|
| T |
21237664 |
tataagataccttggtgcttattctcttgtcaaagtttacatcatttagaattaacaagttgttggcttaaacctccaacaacgtttgaaggcttcagga |
21237763 |
T |
 |
| Q |
191 |
acttaaaaagtctt |
204 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
21237764 |
acttggaaagtctt |
21237777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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