View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6978_low_62 (Length: 223)

Name: NF6978_low_62
Description: NF6978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6978_low_62
NF6978_low_62
[»] chr7 (35 HSPs)
chr7 (1-192)||(27173184-27173375)
chr7 (1-209)||(7826782-7826994)
chr7 (1-209)||(27104950-27105162)
chr7 (1-188)||(4442834-4443021)
chr7 (1-177)||(13458951-13459127)
chr7 (9-135)||(14207281-14207405)
chr7 (9-135)||(14215971-14216095)
chr7 (9-120)||(22034972-22035083)
chr7 (9-103)||(17131664-17131758)
chr7 (2-78)||(13965823-13965899)
chr7 (2-78)||(26091953-26092029)
chr7 (2-78)||(40924972-40925048)
chr7 (2-78)||(49155319-49155395)
chr7 (9-103)||(17142486-17142580)
chr7 (2-78)||(21755430-21755506)
chr7 (24-78)||(26115767-26115821)
chr7 (22-71)||(11550299-11550348)
chr7 (2-71)||(12798656-12798725)
chr7 (22-71)||(14957578-14957627)
chr7 (22-78)||(8710622-8710678)
chr7 (22-78)||(13689058-13689114)
chr7 (22-78)||(14335413-14335469)
chr7 (22-78)||(44788548-44788604)
chr7 (24-71)||(14261423-14261470)
chr7 (22-71)||(9591388-9591437)
chr7 (2-71)||(14140704-14140773)
chr7 (17-78)||(15146115-15146176)
chr7 (22-71)||(15158254-15158303)
chr7 (2-71)||(15343456-15343525)
chr7 (2-71)||(16947627-16947696)
chr7 (2-71)||(19150036-19150105)
chr7 (2-71)||(20749435-20749504)
chr7 (22-78)||(11234410-11234466)
chr7 (2-78)||(12459646-12459722)
chr7 (22-78)||(18587368-18587424)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-209)||(26318-26530)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-209)||(23885-24097)
[»] chr6 (26 HSPs)
chr6 (1-209)||(16379685-16379897)
chr6 (1-209)||(16647281-16647493)
chr6 (1-192)||(16100793-16100984)
chr6 (26-192)||(18401423-18401589)
chr6 (114-209)||(1646239-1646338)
chr6 (56-150)||(14133901-14133995)
chr6 (1-61)||(14149316-14149376)
chr6 (2-71)||(21474499-21474568)
chr6 (2-78)||(24367292-24367368)
chr6 (1-71)||(19455922-19455992)
chr6 (1-71)||(19466067-19466137)
chr6 (17-78)||(16924968-16925029)
chr6 (2-71)||(18797589-18797658)
chr6 (2-71)||(19437901-19437970)
chr6 (22-78)||(2872135-2872191)
chr6 (2-78)||(10466161-10466237)
chr6 (22-78)||(16574782-16574838)
chr6 (22-78)||(16620542-16620598)
chr6 (22-78)||(27190328-27190384)
chr6 (22-78)||(27258856-27258912)
chr6 (22-78)||(29589772-29589828)
chr6 (2-71)||(19486607-19486676)
chr6 (22-71)||(22829719-22829768)
chr6 (2-71)||(24515727-24515796)
chr6 (22-71)||(28312529-28312578)
chr6 (22-66)||(24293115-24293159)
[»] chr4 (29 HSPs)
chr4 (1-209)||(14999539-14999751)
chr4 (1-209)||(15290325-15290537)
chr4 (5-192)||(12340036-12340225)
chr4 (2-78)||(3261962-3262038)
chr4 (2-78)||(7357295-7357371)
chr4 (2-78)||(11204400-11204476)
chr4 (2-78)||(29450705-29450781)
chr4 (2-78)||(44659034-44659110)
chr4 (22-71)||(14683602-14683651)
chr4 (2-71)||(20893066-20893135)
chr4 (22-78)||(8050551-8050607)
chr4 (22-78)||(8389440-8389496)
chr4 (22-78)||(12479628-12479684)
chr4 (22-78)||(14300907-14300963)
chr4 (22-78)||(16233920-16233976)
chr4 (22-78)||(17092077-17092133)
chr4 (22-78)||(19635164-19635220)
chr4 (22-78)||(19775721-19775777)
chr4 (22-78)||(23958775-23958831)
chr4 (22-78)||(27714364-27714420)
chr4 (27-78)||(14697129-14697180)
chr4 (24-71)||(16150671-16150718)
chr4 (24-71)||(16154817-16154864)
chr4 (22-71)||(13513385-13513434)
chr4 (2-71)||(15073394-15073463)
chr4 (22-71)||(18224374-18224423)
chr4 (22-71)||(18604747-18604796)
chr4 (2-71)||(27903420-27903489)
chr4 (22-71)||(40476075-40476124)
[»] chr3 (45 HSPs)
chr3 (1-209)||(30149879-30150091)
chr3 (1-209)||(8271805-8272017)
chr3 (1-209)||(13964761-13964970)
chr3 (1-192)||(6150259-6150450)
chr3 (1-192)||(22150143-22150334)
chr3 (1-148)||(15944001-15944148)
chr3 (1-189)||(17201181-17201370)
chr3 (144-192)||(15948020-15948068)
chr3 (2-78)||(10408625-10408701)
chr3 (2-78)||(12509879-12509955)
chr3 (2-78)||(28756976-28757052)
chr3 (2-78)||(47126601-47126677)
chr3 (22-78)||(15399944-15400000)
chr3 (22-71)||(24185844-24185893)
chr3 (22-78)||(3688590-3688646)
chr3 (22-78)||(5422357-5422413)
chr3 (22-78)||(10008247-10008303)
chr3 (22-78)||(10908857-10908913)
chr3 (22-78)||(12889356-12889412)
chr3 (22-78)||(13255337-13255393)
chr3 (22-78)||(15345672-15345728)
chr3 (22-78)||(15358730-15358786)
chr3 (22-78)||(15586819-15586875)
chr3 (22-78)||(15713483-15713539)
chr3 (22-78)||(26790840-26790896)
chr3 (22-78)||(43165322-43165378)
chr3 (22-78)||(48428094-48428150)
chr3 (24-71)||(16327127-16327174)
chr3 (1-71)||(13317929-13317999)
chr3 (17-71)||(16804369-16804423)
chr3 (1-71)||(16831923-16831993)
chr3 (22-71)||(6603389-6603438)
chr3 (17-66)||(11861033-11861082)
chr3 (2-71)||(11949321-11949390)
chr3 (2-71)||(12181008-12181077)
chr3 (26-71)||(12273002-12273047)
chr3 (22-71)||(16638427-16638476)
chr3 (22-71)||(16754128-16754177)
chr3 (2-71)||(17494311-17494380)
chr3 (22-71)||(20059481-20059530)
chr3 (2-71)||(24189968-24190037)
chr3 (2-71)||(31692581-31692650)
chr3 (2-71)||(31941567-31941636)
chr3 (22-71)||(53382445-53382494)
chr3 (22-78)||(15065718-15065774)
[»] chr1 (23 HSPs)
chr1 (1-209)||(20828631-20828843)
chr1 (1-192)||(20527982-20528173)
chr1 (9-189)||(20927986-20928166)
chr1 (1-192)||(41215099-41215286)
chr1 (26-192)||(22133016-22133182)
chr1 (9-119)||(20172164-20172275)
chr1 (2-78)||(20074949-20075025)
chr1 (2-78)||(31537237-31537313)
chr1 (2-78)||(38910066-38910142)
chr1 (2-78)||(48425947-48426023)
chr1 (2-78)||(52988815-52988891)
chr1 (24-78)||(20297455-20297509)
chr1 (2-78)||(37680123-37680199)
chr1 (22-78)||(16347855-16347911)
chr1 (22-78)||(21833345-21833401)
chr1 (22-78)||(33388289-33388345)
chr1 (22-78)||(51330752-51330808)
chr1 (17-71)||(17042270-17042324)
chr1 (22-71)||(21228816-21228865)
chr1 (2-71)||(21739276-21739345)
chr1 (17-78)||(22496511-22496572)
chr1 (22-71)||(41350928-41350977)
chr1 (22-78)||(24785117-24785173)
[»] chr5 (28 HSPs)
chr5 (1-207)||(24584019-24584229)
chr5 (1-192)||(23508512-23508703)
chr5 (87-209)||(21934623-21934749)
chr5 (2-78)||(14884341-14884417)
chr5 (2-78)||(20345224-20345300)
chr5 (24-78)||(22505621-22505675)
chr5 (1-78)||(25851014-25851091)
chr5 (2-71)||(23078255-23078324)
chr5 (22-78)||(14997109-14997165)
chr5 (22-78)||(16359462-16359518)
chr5 (22-78)||(19772920-19772976)
chr5 (22-78)||(22330257-22330313)
chr5 (22-78)||(27521366-27521422)
chr5 (22-78)||(27613316-27613372)
chr5 (22-78)||(27665860-27665916)
chr5 (22-78)||(27682770-27682826)
chr5 (22-78)||(29473443-29473499)
chr5 (22-78)||(34569454-34569510)
chr5 (22-78)||(37288866-37288922)
chr5 (22-78)||(41773802-41773858)
chr5 (24-78)||(40711740-40711794)
chr5 (22-71)||(18782081-18782130)
chr5 (2-71)||(21561375-21561444)
chr5 (2-71)||(21983527-21983596)
chr5 (30-103)||(26056565-26056638)
chr5 (22-78)||(20803557-20803613)
chr5 (22-78)||(21882734-21882790)
chr5 (22-78)||(23526011-23526067)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-209)||(1133-1345)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-189)||(35031-35219)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-209)||(4975-5188)
[»] chr8 (29 HSPs)
chr8 (1-192)||(21847947-21848138)
chr8 (1-192)||(20649965-20650156)
chr8 (2-192)||(16415066-16415256)
chr8 (1-192)||(21194162-21194353)
chr8 (1-192)||(22437270-22437461)
chr8 (9-192)||(23903142-23903324)
chr8 (2-78)||(16268835-16268911)
chr8 (2-78)||(28984005-28984081)
chr8 (2-78)||(28989224-28989300)
chr8 (2-71)||(19985281-19985350)
chr8 (2-71)||(21928529-21928598)
chr8 (2-71)||(22027891-22027960)
chr8 (22-78)||(17671653-17671709)
chr8 (22-78)||(19115494-19115550)
chr8 (22-78)||(20015894-20015950)
chr8 (22-78)||(22117806-22117862)
chr8 (22-78)||(22126590-22126646)
chr8 (2-70)||(22373971-22374039)
chr8 (22-78)||(32603239-32603295)
chr8 (27-78)||(22375090-22375141)
chr8 (17-71)||(22031204-22031258)
chr8 (1-71)||(22053964-22054034)
chr8 (22-71)||(18859678-18859727)
chr8 (22-71)||(19481703-19481752)
chr8 (17-78)||(19981061-19981122)
chr8 (2-71)||(20391187-20391256)
chr8 (22-71)||(22042928-22042977)
chr8 (22-71)||(30310775-30310824)
chr8 (2-71)||(31414143-31414212)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-192)||(90445-90636)
scaffold0021 (1-192)||(8100-8291)
scaffold0021 (1-192)||(21046-21236)
scaffold0021 (1-192)||(30622-30812)
[»] chr2 (23 HSPs)
chr2 (1-192)||(22280650-22280841)
chr2 (3-192)||(22739363-22739552)
chr2 (51-192)||(24567425-24567566)
chr2 (26-192)||(25131154-25131320)
chr2 (2-78)||(20848248-20848324)
chr2 (22-78)||(9338241-9338297)
chr2 (22-78)||(9486875-9486931)
chr2 (22-78)||(10871509-10871565)
chr2 (22-78)||(16983899-16983955)
chr2 (22-78)||(17001659-17001715)
chr2 (22-78)||(22323070-22323126)
chr2 (22-78)||(24265029-24265085)
chr2 (22-78)||(24712693-24712749)
chr2 (22-78)||(27220675-27220731)
chr2 (22-78)||(27373928-27373984)
chr2 (22-78)||(44383298-44383354)
chr2 (24-71)||(19716747-19716794)
chr2 (24-71)||(19721310-19721357)
chr2 (24-71)||(23113389-23113436)
chr2 (17-78)||(21322989-21323050)
chr2 (17-78)||(24705205-24705266)
chr2 (22-78)||(11351439-11351495)
chr2 (22-78)||(23029189-23029245)
[»] scaffold0011 (5 HSPs)
scaffold0011 (1-191)||(181934-182124)
scaffold0011 (9-192)||(73775-73958)
scaffold0011 (9-192)||(78156-78339)
scaffold0011 (19-192)||(175701-175874)
scaffold0011 (9-71)||(151631-151693)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-189)||(131659-131847)
scaffold0008 (1-192)||(26719-26910)
[»] scaffold0467 (2 HSPs)
scaffold0467 (1-192)||(791-982)
scaffold0467 (1-124)||(13501-13624)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-209)||(7032-7243)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-192)||(12795-12986)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-192)||(1122-1313)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-189)||(25124-25313)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-189)||(15856-16044)
[»] scaffold0673 (1 HSPs)
scaffold0673 (1-192)||(5474-5665)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-189)||(4073-4260)
[»] scaffold0561 (1 HSPs)
scaffold0561 (1-192)||(6174-6365)
[»] scaffold0962 (1 HSPs)
scaffold0962 (1-192)||(2516-2705)
[»] scaffold0112 (1 HSPs)
scaffold0112 (17-192)||(3442-3617)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-129)||(25870-25999)
[»] scaffold0058 (1 HSPs)
scaffold0058 (5-119)||(77446-77560)
[»] scaffold0462 (1 HSPs)
scaffold0462 (35-131)||(2701-2797)
[»] scaffold0233 (1 HSPs)
scaffold0233 (1-120)||(20896-21015)
[»] scaffold1164 (1 HSPs)
scaffold1164 (143-192)||(2291-2340)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-78)||(29991-30067)
[»] scaffold0041 (1 HSPs)
scaffold0041 (2-78)||(41792-41868)
[»] scaffold0010 (1 HSPs)
scaffold0010 (2-78)||(39504-39580)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-78)||(514524-514600)
[»] scaffold0068 (1 HSPs)
scaffold0068 (24-78)||(67301-67355)
[»] scaffold0585 (1 HSPs)
scaffold0585 (2-71)||(4260-4329)
[»] scaffold0102 (2 HSPs)
scaffold0102 (2-71)||(42762-42831)
scaffold0102 (17-78)||(50531-50592)
[»] scaffold0443 (1 HSPs)
scaffold0443 (2-78)||(11866-11942)
[»] scaffold0118 (1 HSPs)
scaffold0118 (2-78)||(518-594)
[»] scaffold0412 (1 HSPs)
scaffold0412 (17-71)||(15765-15819)
[»] scaffold1530 (1 HSPs)
scaffold1530 (2-71)||(647-716)
[»] scaffold1433 (1 HSPs)
scaffold1433 (2-71)||(1482-1551)
[»] scaffold0993 (1 HSPs)
scaffold0993 (17-78)||(1039-1100)
[»] scaffold0420 (1 HSPs)
scaffold0420 (2-71)||(8678-8747)
[»] scaffold0405 (1 HSPs)
scaffold0405 (2-71)||(5666-5735)
[»] scaffold0404 (1 HSPs)
scaffold0404 (2-71)||(7808-7877)
[»] scaffold0310 (1 HSPs)
scaffold0310 (2-71)||(11041-11110)
[»] scaffold0298 (1 HSPs)
scaffold0298 (2-71)||(9398-9467)
[»] scaffold0259 (1 HSPs)
scaffold0259 (22-71)||(8322-8371)
[»] scaffold0167 (1 HSPs)
scaffold0167 (2-71)||(1184-1253)
[»] scaffold0104 (1 HSPs)
scaffold0104 (2-71)||(43590-43659)
[»] scaffold0028 (3 HSPs)
scaffold0028 (22-71)||(11533-11582)
scaffold0028 (22-71)||(18001-18050)
scaffold0028 (22-71)||(55068-55117)
[»] scaffold0007 (1 HSPs)
scaffold0007 (22-71)||(48729-48778)
[»] scaffold0423 (1 HSPs)
scaffold0423 (22-78)||(2454-2510)
[»] scaffold0411 (1 HSPs)
scaffold0411 (22-78)||(8467-8523)
[»] scaffold0055 (1 HSPs)
scaffold0055 (22-78)||(22304-22360)
[»] scaffold0052 (1 HSPs)
scaffold0052 (22-78)||(7293-7349)
[»] scaffold0044 (1 HSPs)
scaffold0044 (22-78)||(3481-3537)
[»] scaffold1056 (1 HSPs)
scaffold1056 (24-71)||(1785-1832)
[»] scaffold0615 (1 HSPs)
scaffold0615 (1-40)||(9542-9581)
[»] scaffold0410 (1 HSPs)
scaffold0410 (17-76)||(200-259)
[»] scaffold0309 (1 HSPs)
scaffold0309 (24-71)||(12791-12838)
[»] scaffold0156 (1 HSPs)
scaffold0156 (24-71)||(37003-37050)
[»] scaffold0108 (1 HSPs)
scaffold0108 (24-71)||(50169-50216)
[»] scaffold0067 (2 HSPs)
scaffold0067 (2-69)||(29690-29757)
scaffold0067 (1-71)||(64772-64842)
[»] scaffold0040 (2 HSPs)
scaffold0040 (27-78)||(17935-17986)
scaffold0040 (24-78)||(111100-111154)
[»] scaffold0020 (2 HSPs)
scaffold0020 (24-71)||(98776-98823)
scaffold0020 (27-71)||(176052-176096)
[»] scaffold0079 (1 HSPs)
scaffold0079 (17-71)||(36562-36616)
[»] scaffold0017 (2 HSPs)
scaffold0017 (17-71)||(17252-17306)
scaffold0017 (17-78)||(195024-195085)
[»] scaffold2059 (1 HSPs)
scaffold2059 (22-71)||(960-1009)
[»] scaffold1459 (1 HSPs)
scaffold1459 (17-66)||(1218-1267)
[»] scaffold1299 (1 HSPs)
scaffold1299 (2-71)||(2019-2088)
[»] scaffold1288 (1 HSPs)
scaffold1288 (2-71)||(26-95)
[»] scaffold0865 (1 HSPs)
scaffold0865 (2-71)||(1443-1512)
[»] scaffold0751 (1 HSPs)
scaffold0751 (2-71)||(5245-5314)
[»] scaffold0708 (1 HSPs)
scaffold0708 (2-71)||(5316-5385)
[»] scaffold0664 (1 HSPs)
scaffold0664 (2-71)||(7102-7171)
[»] scaffold0550 (1 HSPs)
scaffold0550 (17-78)||(10344-10405)
[»] scaffold0431 (1 HSPs)
scaffold0431 (22-71)||(10432-10481)
[»] scaffold0367 (1 HSPs)
scaffold0367 (2-71)||(9192-9261)
[»] scaffold0273 (1 HSPs)
scaffold0273 (17-78)||(97-158)
[»] scaffold0239 (1 HSPs)
scaffold0239 (2-71)||(9957-10026)
[»] scaffold0222 (1 HSPs)
scaffold0222 (2-71)||(20878-20947)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-71)||(29591-29660)
[»] scaffold0165 (1 HSPs)
scaffold0165 (2-71)||(12024-12093)
[»] scaffold0148 (1 HSPs)
scaffold0148 (17-78)||(2056-2117)
[»] scaffold0133 (1 HSPs)
scaffold0133 (2-71)||(28456-28525)
[»] scaffold0130 (1 HSPs)
scaffold0130 (22-71)||(7970-8019)
[»] scaffold0109 (1 HSPs)
scaffold0109 (22-71)||(13315-13364)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-71)||(53594-53663)
[»] scaffold0074 (1 HSPs)
scaffold0074 (2-71)||(15187-15256)
[»] scaffold0056 (1 HSPs)
scaffold0056 (2-71)||(1054-1123)
[»] scaffold0046 (1 HSPs)
scaffold0046 (2-71)||(70172-70241)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-71)||(2123-2192)
[»] scaffold0023 (2 HSPs)
scaffold0023 (17-78)||(30760-30821)
scaffold0023 (2-71)||(164572-164641)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-71)||(230043-230092)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-71)||(200639-200708)
[»] scaffold0203 (1 HSPs)
scaffold0203 (3-71)||(1026-1094)
[»] scaffold0080 (2 HSPs)
scaffold0080 (22-78)||(31940-31996)
scaffold0080 (22-78)||(37406-37462)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-78)||(424365-424421)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 27173375 - 27173184
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27173375 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 27173276  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27173275 ttgggtttggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 27173184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 7826994 - 7826782
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826994 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 7826895  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  7826894 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 7826795  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  7826794 attttggtgatgt 7826782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 27104950 - 27105162
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27104950 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 27105049  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  27105050 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 27105149  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  27105150 attttggtgatgt 27105162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 4443021 - 4442834
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||| |||||||||||| |||    
T  4443021 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttctacctcggttagttgtgttgagcgt 4442922  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgcta 188  Q
    |||  ||||||||||||||| |||||||| || || || ||||||||||||||||| |||||||| |||||||| ||  |||||||||    
T  4442921 ttgaatttggttgtaactccgttgttgcgagggatggtcattgacaccccggctagtggttcggtaactacttccttagtgtgtgcta 4442834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 13459127 - 13458951
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | |    
T  13459127 tcttctccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatttcggttagttgtgttgagcat 13459028  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttt 177  Q
    |||  ||| ||||||||||  |||||||| || || || ||  ||||||||||||| |||| |||||||||||||||    
T  13459027 ttgaatttagttgtaactctgttgttgcgagggatggtcatcaacaccccggctagtggttaggtgactacttcttt 13458951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 14207405 - 14207281
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||||| |||||||||  |||  |||||| |||||||||||||||||||  |||    
T  14207405 gaggtatgtgttttatcaatagtactcctttaattgcaattattaatactggcgctactcat--tttggtctcggttagttgtgttgaacgtttgaattt 14207308  T
Q  109 ggttgtaactcctttgttgcggggaat 135  Q
    |||||||||||| |||| ||| |||||    
T  14207307 ggttgtaactccgttgtcgcgtggaat 14207281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 14216095 - 14215971
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||||| |||||||||  |||  |||||| |||||||||||||||||||  |||    
T  14216095 gaggtatgtgttttatcaatagtactcctttaattgcaattattaatactggcgctactcat--tttggtctcggttagttgtgttgaacgtttgaattt 14215998  T
Q  109 ggttgtaactcctttgttgcggggaat 135  Q
    |||||||||||| |||| ||| |||||    
T  14215997 ggttgtaactccgttgtcgcgtggaat 14215971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 22035083 - 22034972
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    |||||||||||||||| |||||||||| |||| |||||| | |||||||| ||||||| |||||||| ||||||  |||||||||||||| ||||  |||    
T  22035083 gaggtatgtgttttatcaatagtactcatttgattgcaaatgttgatacttgtgctacgcattctttcatctcgcttagttgtgttgaacctttgaattt 22034984  T
Q  109 ggttgtaactcc 120  Q
    |||| |||||||    
T  22034983 ggttttaactcc 22034972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 17131758 - 17131664
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttg 103  Q
    |||||||||||||||  || |||||||| ||| ||| |||||||||||| |||||||| ||||||||||| |||  ||||||||  |||||||||    
T  17131758 gaggtatgtgttttaacaacagtactccattgattgtaattattgatacgggtgctacccattcttttatatcgcttagttgtgcggaacgtttg 17131664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 13965823 - 13965899
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  13965823 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 13965899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 26091953 - 26092029
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  26091953 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 26092029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 40924972 - 40925048
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  40924972 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 40925048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 49155395 - 49155319
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  49155395 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 49155319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 17142486 - 17142580
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttg 103  Q
    |||| ||||||||||| |  |||| ||  ||| |||||||||||||| | ||||||  ||||||||||||||||  |||||||||||||||||||    
T  17142486 gagggatgtgttttatcatcagtattcaattgattgcaattattgattcgggtgcttttcattcttttatctcgcttagttgtgttgaacgtttg 17142580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 21755506 - 21755430
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| |||||||||| |||||||||||||| ||||||    
T  21755506 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattggtgctactcattgttttat 21755430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 26115767 - 26115821
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    ||||||||||||||||  |||| |||||||||| |||||||||||||| ||||||    
T  26115767 ttaatagtactcctttaattgctattattgatattggtgctactcattgttttat 26115821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 11550299 - 11550348
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  11550299 tattaataatactcctttagttgctattattgatactggtgctactcatt 11550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 12798656 - 12798725
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  12798656 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 12798725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 14957627 - 14957578
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  14957627 tattaataatactcctttagttgctattattgatactggtgctactcatt 14957578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8710678 - 8710622
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  8710678 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 8710622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 13689114 - 13689058
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  13689114 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 13689058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 14335469 - 14335413
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  14335469 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 14335413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 44788548 - 44788604
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  44788548 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 44788604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 14261423 - 14261470
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  14261423 ttaatagtactcctttaattgctattatagatactggtgctactcatt 14261470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 9591437 - 9591388
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  9591437 tattaataatactcctttagttgctattattgatactggtgctacacatt 9591388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 14140773 - 14140704
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  14140773 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 14140704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 15146115 - 15146176
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| ||||||||| || |||||  |||| |||||||||||||||||||| |||| ||||||    
T  15146115 tgttatattaatagaacacctttagttgctattattgatactggtgctacgcattgttttat 15146176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 15158254 - 15158303
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  15158254 tattaataatactcctttagttgctattattgatactggtgctacgcatt 15158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 15343525 - 15343456
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  15343525 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 15343456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 16947627 - 16947696
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  |||||||||||| |||  |||| ||||| |||||||||||||||||||    
T  16947627 cttatcagaggtacttgtttctttaatagtactcatttaattgctattatagatactggtgctactcatt 16947696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19150105 - 19150036
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||||| |||||||||    
T  19150105 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggttctactcatt 19150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 20749504 - 20749435
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||||| |||||||||    
T  20749504 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggttctactcatt 20749435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 11234410 - 11234466
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||| ||||||||||||| |||| ||||||    
T  11234410 tattaataatactcctttagttgctattattaatactggtgctacgcattgttttat 11234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 12459722 - 12459646
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||| ||||||| ||| ||||||    
T  12459722 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactgatgctactaattgttttat 12459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 18587368 - 18587424
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||  |||||||||||||||||||| |||| ||||||    
T  18587368 tattaataatactcctttagttgttattattgatactggtgctacgcattgttttat 18587424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 26530 - 26318
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26530 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 26431  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  26430 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 26331  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  26330 attttggtgatgt 26318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 24097 - 23885
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24097 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 23998  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  23997 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 23898  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  23897 attttggtgatgt 23885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 6e-95; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16379685 - 16379897
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16379685 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 16379784  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  16379785 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 16379884  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  16379885 attttggtgatgt 16379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16647281 - 16647493
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16647281 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttaaacgt 16647380  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    ||||    
T  16647381 ttggatttggttgtaactcatttgttgcgtggaatggttattgacaccccgactagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 16647480  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  16647481 attttggtgatgt 16647493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 16100984 - 16100793
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||| |||| |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||    
T  16100984 tcttatccgaagtatttgttttatcaatagtactcctttgattgcaattattgatattggtgctactcatttttttatctcggttagttgtgttgagcgt 16100885  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16100884 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccgactagcggttcggtgactacttcttttatgtgtgctaagtg 16100793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 18401589 - 18401423
Alignment:
Q  26 aatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaactcctttgt 125  Q
    ||||||||||||||| ||||||||||||||| ||||| |||| || |||||||||||| |||||||||||||||||||   ||||||| |||||||||||    
T  18401589 aatagtactcctttgattgcaattattgatattggtgttactgatacttttatctcggttagttgtgttgaacgtttgaaattggttggaactcctttgt 18401490  T
Q  126 tgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  18401489 tgcggggaatggttattgacaccctgactagcggttcagtgactacttcttttatgtgtgctaagtg 18401423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 1646239 - 1646338
Alignment:
Q  114 taactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gttaattttggtgatgt 209  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  1646239 taactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgttaattttggtgatgt 1646338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 14133995 - 14133901
Alignment:
Q  56 actggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaactcctttgttgcggggaatcgttattgacacccc 150  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||   |||||||||||||| |||||||| || || || |||||||||||    
T  14133995 actggtgctactcattcttttatctcggttagttgtgttgagcgtttgaaattggttgtaactccgttgttgcgagggatggtcattgacacccc 14133901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14149376 - 14149316
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggt 61  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  14149376 tcttatccgaggtatgtgttttatcgatagtactcctttgattgcaattattgatactggt 14149316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 21474568 - 21474499
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||| |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  21474568 cttatcagaggtatttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 21474499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 24367368 - 24367292
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| |||||| |||||||||||||||||| ||||||    
T  24367368 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattaatactggtgctactcattgttttat 24367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19455992 - 19455922
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  19455992 tcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 19455922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19466137 - 19466067
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  19466137 tcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 19466067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 16924968 - 16925029
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16924968 tgttatattaataatactcctttagttgctattattgatactggtgctacacattgttttat 16925029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 18797658 - 18797589
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  18797658 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 18797589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19437970 - 19437901
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  19437970 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 19437901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 2872135 - 2872191
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  2872135 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 2872191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 10466161 - 10466237
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||| ||||||||||| ||||||    
T  10466161 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactgttgctactcattgttttat 10466237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16574838 - 16574782
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16574838 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 16574782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 16620542 - 16620598
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16620542 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 16620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27190384 - 27190328
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27190384 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27190328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 27258856 - 27258912
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27258856 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 29589772 - 29589828
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  29589772 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 29589828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 19486607 - 19486676
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||  |||||||||||||||||||| ||||    
T  19486607 cttatcagaggtacttgtttctttaatagtactcctttaattgttattattgatactggtgctacacatt 19486676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 22829719 - 22829768
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  22829719 tattaataatactcctttagttgctattattgatactggtgctacgcatt 22829768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24515727 - 24515796
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  24515727 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 24515796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 28312578 - 28312529
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  28312578 tattaataatactcctttagttgctattattgatactggtgctacgcatt 28312529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 24293115 - 24293159
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctac 66  Q
    |||||||| |||||||||  |||| ||||||||||||||||||||    
T  24293115 tattaataatactcctttagttgctattattgatactggtgctac 24293159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 14999751 - 14999539
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14999751 tcttatccgaggtatgcgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 14999652  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  14999651 ttggatttggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 14999552  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  14999551 attttggtgatgt 14999539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 15290325 - 15290537
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15290325 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatagtggtgctactcattcttttatctcggctagttgtgttgaacgt 15290424  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  15290425 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 15290524  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  15290525 attttggtgatgt 15290537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 12340036 - 12340225
Alignment:
Q  5 atccgaggtatgtgtttt--attaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgttt 102  Q
    ||||||||||||| ||||  || ||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  12340036 atccgaggtatgtattttttatcaatagtactcctttgattgcgattattgatattggtcctactcattcttttatctcggttagttgtgttgaacgttt 12340135  T
Q  103 gggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |  ||||||||| ||||| |||||||| || |  || || ||||||||| | || ||||||||||||||||| ||  |||| ||||||||    
T  12340136 gaatttggttgtgactccgttgttgcgagggagggtcatcgacaccccgaccagtggttcggtgactacttccttggtgtgcgctaagtg 12340225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 3261962 - 3262038
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  3261962 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 3262038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 7357371 - 7357295
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  7357371 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 7357295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 11204400 - 11204476
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  11204400 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 11204476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 29450705 - 29450781
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  29450705 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 29450781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 44659034 - 44659110
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||    
T  44659034 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcattgttttat 44659110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 14683651 - 14683602
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  14683651 tattaataatactcctttagttgctattattgatactggtgctactcatt 14683602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 20893135 - 20893066
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  20893135 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 20893066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 8050551 - 8050607
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  8050551 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 8050607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8389496 - 8389440
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  8389496 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 8389440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 12479684 - 12479628
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  12479684 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 12479628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 14300907 - 14300963
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  14300907 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 14300963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 16233920 - 16233976
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16233920 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 16233976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 17092077 - 17092133
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  17092077 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 17092133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 19635220 - 19635164
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  19635220 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 19635164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 19775721 - 19775777
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  19775721 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 19775777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 23958831 - 23958775
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  23958831 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 23958775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27714420 - 27714364
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27714420 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27714364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 14697180 - 14697129
Alignment:
Q  27 atagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  14697180 atagtactcctttaattgctattattgatactggtgctacacattgttttat 14697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 16150718 - 16150671
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  16150718 ttaatagtactcctttagttgctattatagatactggtgctactcatt 16150671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 16154864 - 16154817
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  16154864 ttaatagtactcctttagttgctattatagatactggtgctactcatt 16154817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 13513434 - 13513385
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  13513434 tattaataatactcctttagttgctattattgatactggtgctacacatt 13513385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 15073463 - 15073394
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  |||||| |||||||||  |||| ||||| |||||||||||||||||||    
T  15073463 cttatcagaggtacttgtttctttaataatactcctttaattgctattatagatactggtgctactcatt 15073394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 18224374 - 18224423
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  18224374 tattaataatactcctttagttgctattattgatactggtgctacacatt 18224423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 18604747 - 18604796
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  18604747 tattaataatactcctttagttgctattattgatactggtgctacgcatt 18604796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 27903489 - 27903420
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  27903489 cttatcagaggtacatgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 27903420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 40476124 - 40476075
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  40476124 tattaataatactcctttagttgctattattgatactggtgctacgcatt 40476075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 30150091 - 30149879
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30150091 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 30149992  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  30149991 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 30149892  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  30149891 attttggtgatgt 30149879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 8271805 - 8272017
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8271805 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 8271904  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    ||||    
T  8271905 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaaatgtcctgtta 8272004  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  8272005 attttggtgatgt 8272017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 13964761 - 13964970
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13964761 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaaagt 13964860  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||    ||||    
T  13964861 ttggatttggttgtaactcgtttgttgcgtggaatggttattgataccccggctagcggttcggtgacta---cttttatgtgtgctaagtgtcctgtta 13964957  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  13964958 attttggtgatgt 13964970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 6150259 - 6150450
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||    
T  6150259 tcttatccgaggtatgtgttttatcaatagtactcatttgattgcaattattgatattggtgctactcattcttttatatcggttagttgtgttgagcgt 6150358  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  6150359 ttgaaattggttgtaactcccttgttgcggggaatggttattgacaccccggctagaggttcggttactacttcttttatgtgtgctaagtg 6150450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 22150143 - 22150334
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||| |||||||| |||    
T  22150143 tcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctagtcattcttttatcttggttagctgtgttgagcgt 22150242  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22150243 ttgaaattggttgtaactcctttgttgcggggaacggttattgataccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 22150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15944001 - 15944148
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  15944001 tcttatacgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactcattcttttatctcggttagttgtgttgaacgt 15944100  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacacc 148  Q
    |||  ||||||||||||| ||||||||| |||||| ||||||||||||    
T  15944101 ttgaatttggttgtaacttctttgttgcagggaatggttattgacacc 15944148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 17201370 - 17201181
Alignment:
Q  1 tcttatccgaggtatgtgtttt-attaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacg 99  Q
    ||||||| || ||||||||||| || ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||    
T  17201370 tcttatctgatgtatgtgtttttatcaatagtactccattgattgcaattattgatactagtgctactcattcttttatctcggttagttgtgttgagcg 17201271  T
Q  100 tttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    ||||   ||||||||||||||||||||||| || || || || |||||||  ||||||||||||||||||||||||||| ||||||||||    
T  17201270 tttgaaattggttgtaactcctttgttgcgagggatggtcatcgacacccgtgctagcggttcggtgactacttcttttgtgtgtgctaa 17201181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 15948020 - 15948068
Alignment:
Q  144 acaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15948020 acaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 15948068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 10408701 - 10408625
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  10408701 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 10408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 12509879 - 12509955
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  12509879 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 12509955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 28757052 - 28756976
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  28757052 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 28756976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 47126677 - 47126601
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  47126677 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 47126601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 15399944 - 15400000
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||| |||| |||||||||||||||||||| |||| ||||||    
T  15399944 tattaataatactcctttggttgctattattgatactggtgctacgcattgttttat 15400000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 24185893 - 24185844
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  24185893 tattaataatactcctttagttgctattattgatactggtgctactcatt 24185844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 3688646 - 3688590
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  3688646 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 3688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 5422357 - 5422413
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  5422357 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 5422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10008303 - 10008247
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  10008303 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 10008247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10908913 - 10908857
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  10908913 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 10908857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 12889412 - 12889356
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  12889412 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 12889356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 13255393 - 13255337
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  13255393 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 13255337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 15345672 - 15345728
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  15345672 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 15345728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 15358786 - 15358730
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  15358786 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 15358730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 15586819 - 15586875
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  15586819 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 15586875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 15713483 - 15713539
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  15713483 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 15713539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 26790840 - 26790896
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  26790840 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 26790896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 43165378 - 43165322
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  43165378 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 43165322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 48428150 - 48428094
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  48428150 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 48428094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 16327127 - 16327174
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  16327127 ttaatagtactcctttaattgctattatagatactggtgctactcatt 16327174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13317929 - 13317999
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  13317929 tcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 13317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 16804369 - 16804423
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  16804369 tgttatattaataatactcctttagttgctattattgatactggtgctacgcatt 16804423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16831923 - 16831993
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  16831923 tcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 16831993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 6603438 - 6603389
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  6603438 tattaataatactcctttagttgctattattgatactggtgctacccatt 6603389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 11861082 - 11861033
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctac 66  Q
    |||| |||||||| |||||||||  |||| ||||||||||||||||||||    
T  11861082 tgttatattaataatactcctttagttgctattattgatactggtgctac 11861033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 11949321 - 11949390
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  11949321 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 11949390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 12181077 - 12181008
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  12181077 cttatcagaggtacttgtttctttaatagtactcctttagttgctattatagacactggtgctactcatt 12181008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 12273047 - 12273002
Alignment:
Q  26 aatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||  |||| ||||| |||||||||||||||||||    
T  12273047 aatagtactcctttaattgctattatagatactggtgctactcatt 12273002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 16638476 - 16638427
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  16638476 tattaataatactcctttagttgctattattgatactggtgctacgcatt 16638427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 16754128 - 16754177
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  16754128 tattaataatactcctttagttgctattattgatactggtgctacgcatt 16754177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 17494380 - 17494311
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  17494380 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 17494311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 20059481 - 20059530
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  20059481 tattaataatactcctttagttgctattattgatactggtgctacgcatt 20059530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 24190037 - 24189968
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  24190037 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 24189968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 31692581 - 31692650
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||| ||||||||||||||    
T  31692581 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatattggtgctactcatt 31692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 31941636 - 31941567
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||| |||||||||||    
T  31941636 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactgatgctactcatt 31941567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 53382445 - 53382494
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  53382445 tattaataatactcctttagttgctattattgatactggtgctacgcatt 53382494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 15065774 - 15065718
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| ||||| |||  |||| |||||||||||||||||||| |||| ||||||    
T  15065774 tattaataatactcatttagttgctattattgatactggtgctacgcattgttttat 15065718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 20828631 - 20828843
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20828631 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 20828730  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  20828731 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 20828830  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  20828831 attttggtgatgt 20828843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 20528173 - 20527982
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  20528173 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatcctggtgctactcattcttttatctcggttagttgtgttgaacgt 20528074  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  20528073 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccgactagaggttcggtgactacttcttttatgtgtgctaagtg 20527982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 20928166 - 20927986
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||   ||    
T  20928166 gaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgatcgtttgaaatt 20928067  T
Q  109 ggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20928066 ggttataactcctttgttacggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 20927986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 41215099 - 41215286
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||| ||||||||||||| |  |||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  41215099 tcttatccgatgtatgtgttttatcagcagtactccttggattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgagcgt 41215198  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||  ||||||||||||||| |||||||| || || ||||| ||||||||||||||    |||||||||||||| ||  |||||||||||||    
T  41215199 ttgaatttggttgtaactccgttgttgcgagggatggttatcgacaccccggctag----tcggtgactacttccttagtgtgtgctaagtg 41215286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 22133016 - 22133182
Alignment:
Q  26 aatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaactcctttgt 125  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| | ||||   |||||| ||||||| ||||    
T  22133016 aatagtaatcctttgattgcaattattgataccggtgctactcattcttttacctcggttagttgtgttgagcatttgaaattggttctaactccgttgt 22133115  T
Q  126 tgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||| || || || || |||||||||||||  |||||||||||||||| |||| |||| ||||||||    
T  22133116 tgcgagggatggtcatcgacaccccggctaatggttcggtgactacttgttttgtgtgcgctaagtg 22133182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 20172275 - 20172164
Alignment:
Q  9 gaggtatgtgtttt-attaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtt 107  Q
    |||||||||||||| || |||||||||| |||| ||| |||| |||||||| |||||||  ||||||| ||||||  ||||||||||||||||||| |||    
T  20172275 gaggtatgtgtttttatcaatagtactcatttgattgaaattgttgatactagtgctacgtattctttcatctcgcttagttgtgttgaacgtttgagtt 20172176  T
Q  108 tggttgtaactc 119  Q
    ||||| ||||||    
T  20172175 tggttttaactc 20172164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 20074949 - 20075025
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  20074949 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 20075025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 31537237 - 31537313
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  31537237 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 31537313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 38910066 - 38910142
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  38910066 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 38910142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 48426023 - 48425947
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  48426023 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 48425947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 52988891 - 52988815
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  52988891 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 52988815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 20297509 - 20297455
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  20297509 ttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 20297455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 37680199 - 37680123
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||| ||||| ||||||    
T  37680199 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctattcattgttttat 37680123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 16347855 - 16347911
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16347855 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 16347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 21833401 - 21833345
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  21833401 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 21833345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 33388289 - 33388345
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  33388289 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 33388345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 51330752 - 51330808
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  51330752 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 51330808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 17042270 - 17042324
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  17042270 tgttatattaataatactcctttagttgctattattgatactggtgctacacatt 17042324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 21228816 - 21228865
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  21228816 tattaatattactcctttagttgctattattgatactggtgctacgcatt 21228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 21739276 - 21739345
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  || | ||||| |||||||||||||||||||    
T  21739276 cttatcagaggtacttgtttctttaatagtactcctttaatttctattatagatactggtgctactcatt 21739345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 22496511 - 22496572
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22496511 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 22496572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 41350928 - 41350977
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  41350928 tattaataatactcctttagttgctattattgatactggtgctacgcatt 41350977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 24785117 - 24785173
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||| ||||||| |||| ||||||    
T  24785117 tattaataatactcctttagttgctattattgatacttgtgctacacattgttttat 24785173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24584229 - 24584019
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24584229 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 24584130  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  24584129 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcctgtta 24584030  T
Q  197 attttggtgat 207  Q
    |||||||||||    
T  24584029 attttggtgat 24584019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 23508703 - 23508512
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23508703 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgaacgt 23508604  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   |||| |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  23508603 ttgaaattggctgtaactcctttgttgcggggaatggttattaacaccccggctagcggtttggtgactacttcttttatgtgtgttaagtg 23508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 21934623 - 21934749
Alignment:
Q  87 gttgtgttgaacgtttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgc 186  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21934623 gttgtgttgaacgtttggatttggttgtaactcctttgttgcgtggaatggttattgacaccctggctagcggttcggtgactacttcttttatgtgtgc 21934722  T
Q  187 taagtg----gttaattttggtgatgt 209  Q
    ||||||    |||||||||||||||||    
T  21934723 taagtgtcctgttaattttggtgatgt 21934749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 14884341 - 14884417
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  14884341 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 14884417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 20345300 - 20345224
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  20345300 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 20345224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 22505675 - 22505621
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  22505675 ttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 22505621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25851091 - 25851014
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    ||||||| ||||||  |||||  |||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||    
T  25851091 tcttatcagaggtacttgtttctttaatagtactcatttaattgctattattgatactggtgctactcattgttttat 25851014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23078255 - 23078324
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  23078255 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 23078324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 14997109 - 14997165
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  14997109 tattaataatactcctttagttgctattattgatactggtgctacacattgttttat 14997165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16359518 - 16359462
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16359518 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 16359462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 19772976 - 19772920
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  19772976 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 19772920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 22330257 - 22330313
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22330257 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 22330313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27521422 - 27521366
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27521422 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27521366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27613372 - 27613316
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27613372 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27613316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 27665860 - 27665916
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27665860 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27665916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 27682770 - 27682826
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27682770 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27682826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 29473443 - 29473499
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  29473443 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 29473499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 34569510 - 34569454
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  34569510 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 34569454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 37288866 - 37288922
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  37288866 tattaataatactcctttagttgctattattgatactggtgctacacattgttttat 37288922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 41773858 - 41773802
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  41773858 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 41773802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 40711794 - 40711740
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  40711794 ttaataatactcctttagttgctattattgatactggtgctacgcattgttttat 40711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 18782130 - 18782081
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  18782130 tattaataatactcctttagttgctattattgatactggtgctacgcatt 18782081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 21561375 - 21561444
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||| ||||  |||| |||||||||||||||||||| ||||    
T  21561375 cttatcagaggtacttgtttctttaatagtacttctttaattgctattattgatactggtgctacacatt 21561444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 21983527 - 21983596
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  || | |||||||||||||||||||| ||||    
T  21983527 cttatcagaggtacttgtttctttaatagtactcctttaattactattattgatactggtgctacacatt 21983596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 26056638 - 26056565
Alignment:
Q  30 gtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttg 103  Q
    ||||||||||| |||| |||||||||||  |||| || ||||||||||| |  | | |||||||||||||||||    
T  26056638 gtactcctttgattgctattattgatacgagtgcgacacattcttttatttatgttggttgtgttgaacgtttg 26056565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 20803613 - 20803557
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||| ||||||| |||| ||||||    
T  20803613 tattaataatactcctttagttgctattattgatactagtgctacgcattgttttat 20803557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 21882790 - 21882734
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||  |||||||||||||||||||| |||| ||||||    
T  21882790 tattaataatactcctttagttggtattattgatactggtgctacgcattgttttat 21882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 23526067 - 23526011
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| ||||||||||||||||| || |||| ||||||    
T  23526067 tattaataatactcctttagttgctattattgatactggtgcaacacattgttttat 23526011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 1345 - 1133
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1345 tcttatccgaggtatgtgttttatcaatagtactcttttgatttcaattattgatactggtgctactcattcttttatctcggttagttgtgttgaacgt 1246  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  1245 ttgtttttggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtgtcttgtta 1146  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  1145 attttggtgatgt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 35219 - 35031
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35219 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgaacgt 35120  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    |||  |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35119 ttgtatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 35031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 4975 - 5188
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4975 tcttatccgaggtatgtgttttatcaataatactcctttgattgcaattatcgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 5074  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgaca-ccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtt 195  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||    
T  5075 ttggatttggttgtaactcctttgttgcgtggaatggttattgacacccccggctagcggttcggtgactacttcttttatgtgtgctaagtgttctgtt 5174  T
Q  196 aattttggtgatgt 209  Q
    ||||||||||||||    
T  5175 aattttggtgatgt 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21847947 - 21848138
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21847947 tcttatccgaggtatgtgttttatcaatagtactcttttgattgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 21848046  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  21848047 ttggatttggttgtaactcctttgttgcgtggaatggttattgacaccccggctagtggttcggtgactacttcgtttatgtgtgctaagtg 21848138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 20649965 - 20650156
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  20649965 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgagcgt 20650064  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   |||||||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  20650065 ttgaaattggttgtaactcctttgttgcgggggatggttattgacaccccgaccagcggttcggtgactacttcttttatgtgtgataagtg 20650156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 16415256 - 16415066
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtt 101  Q
    ||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16415256 cttatccgaggtatgtgttttatcaatagtattccattgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgaacgtt 16415157  T
Q  102 tgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    ||   ||| || | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16415156 tgaaattgattttgactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 16415066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21194162 - 21194353
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||||||||||||||||| || ||||| |||| |||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||||| | |||    
T  21194162 tcttatccgaggtatgtgtttcatcaatagcactcatttgattggaattattgatattggtgctactcattcttttatctcggttagttgtgttaagcgt 21194261  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21194262 ttgaaattggttgtaactcctttgttgcgggggatggttatcgacaccccggctagaggttcggtgactacttcttttatgtgtgctaagtg 21194353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 22437461 - 22437270
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| || |||||||||||||||||||| |||||||||||| |||    
T  22437461 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcgattattgatactgatgttactcattcttttatctcggttagttgtgttgagcgt 22437362  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   |||||||||||||| |||||||| || || || || ||||||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  22437361 ttgaaattggttgtaactccgttgttgcgagggatggtcatcgacaccccgactagtggttcagtgactacttctttagtgtgtgctaagtg 22437270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 23903324 - 23903142
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    ||||||| |||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||    
T  23903324 gaggtatatgttttatcaatagtactcctt-gattataattattgatactggtgctactcattcttttatctcggctagttgtgttgagcatttgaattt 23903226  T
Q  109 ggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||||||||||| || | ||| || || || || |||||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  23903225 ggttgtaactccgttatcgcgagggatggtcatcgacaccccggctagtggttcggtgactacttccttagtgtgtgctaagtg 23903142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 16268835 - 16268911
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  16268835 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 16268911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 28984081 - 28984005
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||| | ||||||    
T  28984081 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcactgttttat 28984005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 28989300 - 28989224
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||| | ||||||    
T  28989300 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcactgttttat 28989224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19985350 - 19985281
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  19985350 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 19985281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 21928598 - 21928529
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  21928598 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 21928529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 22027891 - 22027960
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  22027891 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 22027960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 17671653 - 17671709
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  17671653 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 17671709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 19115550 - 19115494
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  19115550 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 19115494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 20015894 - 20015950
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  20015894 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 20015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 22117806 - 22117862
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22117806 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 22117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 22126590 - 22126646
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22126590 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 22126646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 22374039 - 22373971
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcat 70  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||||||||||||||    
T  22374039 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcat 22373971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 32603295 - 32603239
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  32603295 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 32603239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 22375090 - 22375141
Alignment:
Q  27 atagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22375090 atagtactcctttaattgctattattgatactggtgctacacattgttttat 22375141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 22031258 - 22031204
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  22031258 tgttatattaataatactcctttagttgctattattgatactggtgctacgcatt 22031204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22054034 - 22053964
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  22054034 tcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 22053964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 18859727 - 18859678
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  18859727 tattaataatactcctttagttgctattattgatactggtgctacgcatt 18859678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 19481703 - 19481752
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  19481703 tattaataatactcctttagttgctattattgatactggtgctacgcatt 19481752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 19981122 - 19981061
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  19981122 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 19981061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 20391256 - 20391187
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  || | |||||||||||||||||||| ||||    
T  20391256 cttatcagaggtacttgtttctttaatagtactcctttaatttctattattgatactggtgctacacatt 20391187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 22042977 - 22042928
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  22042977 tattaataatactcctttagttgctattattgatactggtgctacgcatt 22042928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 30310775 - 30310824
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  30310775 tattaataatactcctttagttgctattattgatactggtgctacacatt 30310824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 31414143 - 31414212
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||| ||||||||||||||    
T  31414143 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatattggtgctactcatt 31414212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 152; Significance: 1e-80; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 90636 - 90445
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  90636 tcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgagcgt 90537  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  90536 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccggctggcggttcggtgactacttcttttatgtgtgctaagtg 90445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 8291 - 8100
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  8291 tcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgagcgt 8192  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||    |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8191 ttgaaaatggttgtaacccctttgttccggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21046 - 21236
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||    
T  21046 tcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatagtggtgctactcattcttttatctcggttagttgtgttgaccgt 21145  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||    | ||||||||||  |||||||| || || || || |||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  21146 ttgaacat-gttgtaactctgttgttgcgagggatggtcatcgacaccccggctagtggttcggtgactacttctttagtgtgtgctaagtg 21236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 30622 - 30812
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||    
T  30622 tcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatagtggtgctactcattcttttatctcggttagttgtgttgaccgt 30721  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||    | ||||||||||  |||||||| || || || || |||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  30722 ttgaacat-gttgtaactctgttgttgcgagggatggtcatcgacaccccggctagtggttcggtgactacttctttagtgtgtgctaagtg 30812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 22280841 - 22280650
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  22280841 tcttatcagaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctagtcattcatttatctcggttagttgtgttgaacgt 22280742  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22280741 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 22280650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 22739363 - 22739552
Alignment:
Q  3 ttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgttt 102  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||    
T  22739363 ttatcagaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgtgcgttt 22739462  T
Q  103 gggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |   |||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  22739463 gaaattggttgtaactcctttgttgcgggggatggttatcgacacctcggctagcggttcggtaactacttcttttatgtgtgctaagtg 22739552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 24567425 - 24567566
Alignment:
Q  51 ttgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaactcctttgttgcggggaatcgttattgacacccc 150  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| ||||||   |||||||||||||||||||||| ||||||  |||||||||||||    
T  24567425 ttgatactagtgctactcattcttttatctcggttagttgtgttgagcgtttgaaattggttgtaactcctttgttgcagggaatgattattgacacccc 24567524  T
Q  151 ggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    | ||||||||||| |||| |||||||||||||||||||||||    
T  24567525 gactagcggttcgatgacaacttcttttatgtgtgctaagtg 24567566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 25131320 - 25131154
Alignment:
Q  26 aatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaactcctttgt 125  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| ||  ||||||||||||||| ||||    
T  25131320 aatagtactcatttgattgcaattattgatactggtgctactcattcttctatctcggttagttgtgtttaacgtctgaatttggttgtaactccgttgt 25131221  T
Q  126 tgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
     ||| || || || || |||||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  25131220 cgcgagggatggtcatcgacaccccggctagtggttcggtgactacttccttagtgtgtgctaagtg 25131154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 20848324 - 20848248
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||    
T  20848324 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcattgttttat 20848248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9338297 - 9338241
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  9338297 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 9338241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9486931 - 9486875
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  9486931 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 9486875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10871565 - 10871509
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  10871565 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 10871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16983955 - 16983899
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  16983955 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 16983899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 17001715 - 17001659
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  17001715 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 17001659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 22323070 - 22323126
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22323070 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 22323126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 24265085 - 24265029
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  24265085 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 24265029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 24712749 - 24712693
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  24712749 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 24712693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27220731 - 27220675
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27220731 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27220675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27373984 - 27373928
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  27373984 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 27373928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 44383298 - 44383354
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  44383298 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 44383354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 19716747 - 19716794
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  19716747 ttaatagtactcctttaattgctattatagatactggtgctactcatt 19716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 19721310 - 19721357
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  19721310 ttaatagtactcctttaattgctattatagatactggtgctactcatt 19721357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 23113436 - 23113389
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| |||||||||||||||||||| ||||    
T  23113436 ttaatagtactcctttaattgctattattgatactggtgctacacatt 23113389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 21322989 - 21323050
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  21322989 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 21323050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 24705205 - 24705266
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||||||| |||||||||  |||  |||||||||||||||||||| |||| ||||||    
T  24705205 tgttatattaataatactcctttagttgatattattgatactggtgctacgcattgttttat 24705266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 11351439 - 11351495
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| ||||| |||  |||| |||||||||||||||||||| |||| ||||||    
T  11351439 tattaataatactcatttagttgctattattgatactggtgctacgcattgttttat 11351495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 23029189 - 23029245
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||| ||  |||| |||||||||||||||||||| |||| ||||||    
T  23029189 tattaataatactcccttagttgctattattgatactggtgctacgcattgttttat 23029245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 147; Significance: 1e-77; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 182124 - 181934
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  182124 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgaacgt 182025  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagt 191  Q
    |||   || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  182024 ttgaaattcgttgtaactccttttttgcggggaatggttattgacaccccggctagcggttcggtgactacttcatttatgtctgctaagt 181934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 73775 - 73958
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||   ||    
T  73775 gaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattgttttatctcggttagttgtgttgaacgtttgaaatt 73874  T
Q  109 ggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  73875 ggttgtaactcctctattgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 73958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 78156 - 78339
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggttt 108  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||   ||    
T  78156 gaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattgttttatctcggttagttgtgttgaacgtttgaaatt 78255  T
Q  109 ggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78256 ggttgtaactcctctattgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 78339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 175701 - 175874
Alignment:
Q  19 ttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaact 118  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||  ||||||||| |||    
T  175701 ttttatcaatagtactcctttgattgcaattattgatactggtgctactcattctttcatctccgttagttgtgttaaacgtttgaatttggttgtgact 175800  T
Q  119 cctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    || || ||| | ||||| || || || |||||| | || ||||||||||||||||| || | |||| |||||||    
T  175801 ccgttattgtgaggaatggtcatcgataccccgaccagtggttcggtgactacttccttgaggtgttctaagtg 175874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 151693 - 151631
Alignment:
Q  9 gaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| |||||  ||||||||||||||||  |||| ||||| |||||| ||||||||||||    
T  151693 gaggtatttgtttctttaatagtactcctttaattgctattatagatactagtgctactcatt 151631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 131659 - 131847
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||    
T  131659 tcttatccgaggtatgtgttttatcaatagaactcctttgattgcaattattgatacttgtgctactcattattttatctcggttagttgtgttgatcgt 131758  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    |||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  131759 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 131847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 26910 - 26719
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||   |||||||||| |  ||    
T  26910 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactgttgctacttattcttttatctcttttagttgtgtttattgt 26811  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||  ||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26810 ttgtttttggttgttactcctttgttgcgtggtatggttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 26719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 791 - 982
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  791 tcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtattgaacgt 890  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||| || ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  891 ttgaaattggttgtaactcctttgtcgcaggggatggttattgacaccccggctagtggttcggtgactacttcttttatgtgtgctaagtg 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 13501 - 13624
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13501 tcttatcagaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgaacgt 13600  T
Q  101 ttgggtttggttgtaactcctttg 124  Q
    |||   ||||||||||||||||||    
T  13601 ttgaaattggttgtaactcctttg 13624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 7032 - 7243
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||    
T  7032 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctacttattcttttatctcggttagttgcgttgatcgt 7131  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg----gtta 196  Q
    |||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||    ||||    
T  7132 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggttcagtgactacttc-tttatgtgtgctaaatgtccagtta 7230  T
Q  197 attttggtgatgt 209  Q
    |||||||||||||    
T  7231 attttggtgatgt 7243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 12795 - 12986
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | |||| || |||||||||||| ||||||||||||||||    
T  12795 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgataatggagatactaatacttttatctcggttagttgtgttgaacgt 12894  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12895 ttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggtttagtgactacttcttttatgtgtgctaagtg 12986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 1122 - 1313
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  1122 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattatagatactggtgctactcattcttttatctcgattagttgtgttgaacgt 1221  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   ||||| ||||||||||||||||||||||| ||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  1222 ttgaaattggtcgtaactcctttgttgcggggaatggttatcgacaccttggctagcgtttcggtgactacttcttttatgtgtgctaagtg 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 25313 - 25124
Alignment:
Q  1 tcttatccgaggtatgtgtttt-attaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacg 99  Q
    |||||||||||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||    
T  25313 tcttatccgaggtatgtgtttttatcaatagtactcctttaattgcaattattgatactggtgctactcattcttttatctcggttagttatgttgagcg 25214  T
Q  100 tttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    ||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  25213 tttgaaattggttgtaactcctttgttgcggggaatggttattgacaccccggctagcggatcggtgactacttcttttatgggtgctaa 25124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 16044 - 15856
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||    
T  16044 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgttacttattcttttatctcggttagttgtgttgaacgt 15945  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    |||  ||||||||||||||||||||||   ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  15944 ttgtatttggttgtaactcctttgttgtttggaatggttattgacaccctgtctagcggttcggtgactacttcttttatgtgtgctaa 15856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 5474 - 5665
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||    
T  5474 tcttattcgtggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatcttggttagttatgttgagcgt 5573  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||   |||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  5574 ttgaaattggttataactcctttgttgcggggaatggttattgacacccctgctagcagttcggtgactacttcttttatgtgtgctaagtg 5665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 4073 - 4260
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| ||| ||||||||| || ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||  || ||||||||| |||    
T  4073 tcttatctgagctatgtgttt-atcaatagtactccgttgattgcaattatcgatactggtgctactcattcttttatctcgattaattgtgttgagcgt 4171  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaa 189  Q
    |||   ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4172 ttgaaattggttgtaactcctttgttgcggggaatggttattgataccccggctagcggttcggtgactacttcttttatgtgtgctaa 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 6174 - 6365
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  6174 tcttatctgaggtatgtgttttatcaatagtactactttgattgcaataattgatactggtgctactcattcttttatctcggttagttgtgttgagcgt 6273  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||  ||||||||| ||||| || ||||| ||||| || || |||||||||||||| ||||| ||||||||||| ||  |||||||||||||    
T  6274 ttgaatttggttgtgactccgttattgcgaggaatggtcatcgacaccccggctagtggttcagtgactacttccttagtgtgtgctaagtg 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 2705 - 2516
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  2705 tcttatccgaggtatgtgttttatcaataatactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttg--cgt 2608  T
Q  101 ttgggtttggttgtaactcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||  ||||||||||||||| || ||||| || || || || ||||||||| ||||  |||||||||||||||| ||  |||||||||||||    
T  2607 ttgaatttggttgtaactccgtttttgcgagggatggtcatcgacaccccgactagttgttcggtgactacttccttagtgtgtgctaagtg 2516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 3617 - 3442
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaa 116  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||  |||| ||| ||    
T  3617 tgttttatcaatagtactcctttgattgcaattattgatattggtgctactcattctttcatctcggttagttgtgttcaacgtttgaatttgtttggaa 3518  T
Q  117 ctcctttgttgcggggaatcgttattgacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||  |||||||| || || || || ||||||||| | || || || ||||||||||| ||   ||||||||||||    
T  3517 ctctgttgttgcgagggatggtcatcgacaccccgaccagtggctcagtgactacttcgttagggtgtgctaagtg 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 25870 - 25999
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactca-ttcttttatctcggctagttgtgttgaacg 99  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| | |||||||||| || ||||||||||| |||||| ||||| ||    
T  25870 tcttatccgaggtatgtgttttatcaatagtactcatttgattgcaattattgatattagtgctactcattttttttatctcggttagttgcgttgagcg 25969  T
Q  100 tttgggtttggttgtaactcctttgttgcg 129  Q
    ||||   ||| |||||||||| ||||||||    
T  25970 tttgaaattgattgtaactccgttgttgcg 25999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 77560 - 77446
Alignment:
Q  5 atccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgg 104  Q
    ||||||| ||||| |||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||| ||||||  ||||| |||||||||||||     
T  77560 atccgagatatgtattttatcaatagtactcctttgtttggaattgttgatactggtgctacgcattctttcatctcgcttagttatgttgaacgtttga 77461  T
Q  105 gtttggttgtaactc 119  Q
     ||||||| ||||||    
T  77460 atttggttttaactc 77446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 2797 - 2701
Alignment:
Q  35 cctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgtttgggtttggttgtaactcctttgttgcggg 131  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| | ||||   |||| ||||||||||||||||||||    
T  2797 cctttgattgcaattattgataccggtgctactcattcttttatctcggttagttgtgttgagcttttgaaattggctgtaactcctttgttgcggg 2701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20896 - 21015
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttatctcggctagttgtgttgaacgt 100  Q
    ||||||||||||||||||||| || |||||| |||||||| ||| |||| |||||||| || |||||||||||||  ||||| ||||||||||||| |||    
T  20896 tcttatccgaggtatgtgtttcatcaatagtgctcctttgattgtaattgttgatactagttctactcattctttcttctcgactagttgtgttgatcgt 20995  T
Q  101 ttgggtttggttgtaactcc 120  Q
    |||  |||||| ||||||||    
T  20996 ttgaatttggtagtaactcc 21015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 2291 - 2340
Alignment:
Q  143 gacaccccggctagcggttcggtgactacttcttttatgtgtgctaagtg 192  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  2291 gacaccccggctagtggttcggtgactacttcttttgtgtgtgctaagtg 2340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 30067 - 29991
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  30067 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 29991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 41868 - 41792
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  41868 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 41792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 39504 - 39580
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  39504 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 39580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 514524 - 514600
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  514524 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 514600  T

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Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 67301 - 67355
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  67301 ttaatagtactcctttaattgctattattgatactggtgctactcattgttttat 67355  T

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Target: scaffold0585 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 4260 - 4329
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| |||||||||||||||||||||||||    
T  4260 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctactcatt 4329  T

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Target: scaffold0102 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 42831 - 42762
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  |||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  42831 cttatcagaggtacttgtttctttaatagtactcctttatttgctattatagatactggtgctactcatt 42762  T

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Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 50531 - 50592
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  50531 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 50592  T

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Target: scaffold0443 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 11942 - 11866
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||    
T  11942 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcattgttttat 11866  T

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Target: scaffold0118 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 594 - 518
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||||||||||||||||| ||||| ||||||    
T  594 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactggtgctagtcattgttttat 518  T

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Target: scaffold0412 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 15765 - 15819
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||| |||||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  15765 tgttatattaataatactcctttagttgcaattattgatactggtgctacgcatt 15819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 716 - 647
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  716 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 647  T

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Target: scaffold1433 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 1482 - 1551
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  1482 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 1551  T

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Target: scaffold0993 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 1100 - 1039
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||||||||||| |||||  |||| |||||||||||||||||||| |||| ||||||    
T  1100 tgttatattaatagtacacctttagttgctattattgatactggtgctacgcattgttttat 1039  T

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Target: scaffold0420 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 8747 - 8678
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  8747 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 8678  T

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Target: scaffold0405 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 5735 - 5666
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  5735 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 5666  T

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Target: scaffold0404 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 7877 - 7808
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  7877 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 7808  T

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Target: scaffold0310 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 11110 - 11041
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  11110 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 11041  T

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Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 9398 - 9467
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  ||||| |||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  9398 cttatcagaggtacttgtttcattaatagtactcctttaattgctattatagacactggtgctactcatt 9467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 8371 - 8322
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  8371 tattaataatactcctttagttgctattattgatactggtgctactcatt 8322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 1253 - 1184
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  1253 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 43590 - 43659
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  43590 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactcatt 43659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 11582 - 11533
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  11582 tattaataatactcctttagttgctattattgatactggtgctactcatt 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 18050 - 18001
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  18050 tattaataatactcctttaattgctattattgatactggtgctactcatt 18001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 55117 - 55068
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  55117 tattaataatactcctttagttgctattattgatactggtgctactcatt 55068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 48778 - 48729
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||||||    
T  48778 tattaataatactcctttagttgctattattgatactggtgctactcatt 48729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 2454 - 2510
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| ||| |||||  |||| |||||||||||||||||||| |||||||||||    
T  2454 tattaataatacacctttagttgctattattgatactggtgctacgcattcttttat 2510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8523 - 8467
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  8523 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 22360 - 22304
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  22360 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 22304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7349 - 7293
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  7349 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 3537 - 3481
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  3537 tattaataatactcctttagttgctattattgatactggtgctacgcattgttttat 3481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 1832 - 1785
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  1832 ttaatagtactcctttaattgctattatagatactggtgctactcatt 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9542 - 9581
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttg 40  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  9542 tcttatccgaggtatgtgttttatcaatagtactcatttg 9581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 259 - 200
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattctttt 76  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| |||| ||||    
T  259 tgttatattaataatactcctttagttgctattattgatactggtgctacgcattgtttt 200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 12838 - 12791
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  12838 ttaatagtactcctttaattgctattatagatactggtgctactcatt 12791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 37050 - 37003
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  37050 ttaatagtactcctttaattgctattatagatactggtgctactcatt 37003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 50216 - 50169
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  50216 ttaatagtactcctttaattgctattatagatactggtgctactcatt 50169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 29757 - 29690
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactca 69  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||||||    
T  29757 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctactca 29690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 64772 - 64842
Alignment:
Q  1 tcttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  64772 tcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 64842  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 17986 - 17935
Alignment:
Q  27 atagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  17986 atagtactcctttaattgctattattgatactggtgctacacattgttttat 17935  T

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Target: scaffold0040; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 111100 - 111154
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||||| |||||  |||| |||||||||||||||||||| |||| ||||||    
T  111100 ttaatagtacacctttagttgctattattgatactggtgctacgcattgttttat 111154  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 98776 - 98823
Alignment:
Q  24 ttaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  98776 ttaatagtactcctttaattgctattatagatactggtgctactcatt 98823  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 176096 - 176052
Alignment:
Q  27 atagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||||||||  |||| ||||| |||||||||||||||||||    
T  176096 atagtactcctttaattgctattatagatactggtgctactcatt 176052  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 36616 - 36562
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  36616 tgttatattaataatactcctttagttgctattattgatactggtgctacgcatt 36562  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 17252 - 17306
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  17252 tgttatattaataatactcctttagttgctattattgatactggtgctacacatt 17306  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 195024 - 195085
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  195024 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 195085  T

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Target: scaffold2059 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 960 - 1009
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  960 tattaataatactcctttagttgctattattgatactggtgctacgcatt 1009  T

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Target: scaffold1459 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 1218 - 1267
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctac 66  Q
    |||| |||||||| |||||||||  |||| ||||||||||||||||||||    
T  1218 tgttatattaataatactcctttagttgctattattgatactggtgctac 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 2019 - 2088
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  2019 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 2088  T

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Target: scaffold1288 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 26 - 95
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| ||||| |||||||||||||    
T  26 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatacgggtgctactcatt 95  T

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Target: scaffold0865 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 1443 - 1512
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||| ||||    
T  1443 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctacacatt 1512  T

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Target: scaffold0751 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 5314 - 5245
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  |||||||||||| |||  |||| ||||| |||||||||||||||||||    
T  5314 cttatcagaggtacttgtttctttaatagtactcatttaattgctattatagatactggtgctactcatt 5245  T

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Target: scaffold0708 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 5316 - 5385
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  |||||||||||| |||  |||| ||||| |||||||||||||||||||    
T  5316 cttatcagaggtacttgtttctttaatagtactcatttaattgctattatagatactggtgctactcatt 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 7171 - 7102
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  7171 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 7102  T

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Target: scaffold0550 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 10344 - 10405
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||||||| |||||||||  |||| ||||||||||||||||| || |||| ||||||    
T  10344 tgttatattaataatactcctttagttgctattattgatactggtgccacgcattgttttat 10405  T

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Target: scaffold0431 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 10481 - 10432
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  10481 tattaataatactcctttagttgctattattgatactggtgctacgcatt 10432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 9192 - 9261
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  9192 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 9261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 158 - 97
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  158 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 9957 - 10026
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  9957 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 10026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 20947 - 20878
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  20947 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 20878  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 29660 - 29591
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||| ||||||||||||    
T  29660 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactagtgctactcatt 29591  T

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Target: scaffold0165 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 12093 - 12024
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||| ||||||||||    
T  12093 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggcgctactcatt 12024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 2117 - 2056
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    ||||| |||||||||||||||||  || | ||||| |||||||||||||| |||| ||||||    
T  2117 tgtttcattaatagtactcctttaattactattatagatactggtgctacgcattgttttat 2056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 28456 - 28525
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| |||||||||||||| ||||    
T  28456 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactggtgctacacatt 28525  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 7970 - 8019
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  7970 tattaataatactcctttagttgctattattgatactggtgctacgcatt 8019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 13315 - 13364
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  13315 tattaataatactcctttagttgctattattgatactggtgctacgcatt 13364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 53594 - 53663
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  53594 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagaaactggtgctactcatt 53663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 15256 - 15187
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  || |||||||||||||  |||| ||||| |||||||||||||||||||    
T  15256 cttatcagaggtacttgtttcttttatagtactcctttaattgctattatagatactggtgctactcatt 15187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 1054 - 1123
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| | |||||||||||||||||    
T  1054 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagctactggtgctactcatt 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 70241 - 70172
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||| ||||||  |||| ||||| |||||||||||||||||||    
T  70241 cttatcagaggtacttgtttctttaatagtattcctttaattgctattatagatactggtgctactcatt 70172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 2123 - 2192
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||| ||||||  |||| ||||| |||||||||||||||||||    
T  2123 cttatcagaggtacttgtttctttaatagtattcctttaattgctattatagatactggtgctactcatt 2192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 30760 - 30821
Alignment:
Q  17 tgttttattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||| |||| ||| |||||||||  |||| |||||||||||||||||||| |||| ||||||    
T  30760 tgttatattgataatactcctttagttgctattattgatactggtgctacgcattgttttat 30821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 164572 - 164641
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  164572 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 164641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 230043 - 230092
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||||| |||||||||  |||| |||||||||||||||||||| ||||    
T  230043 tattaataatactcctttagttgctattattgatactggtgctacgcatt 230092  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 200639 - 200708
Alignment:
Q  2 cttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    |||||| ||||||  |||||  ||||||||||||||||  |||| |||||||||||| ||||||| ||||    
T  200639 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatactagtgctacacatt 200708  T

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Target: scaffold0203 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1026 - 1094
Alignment:
Q  3 ttatccgaggtatgtgttttattaatagtactcctttgtttgcaattattgatactggtgctactcatt 71  Q
    ||||| ||||||  |||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  1026 ttatcagaggtacttgtttctttaatagtactcctttaattgctattatagacactggtgctactcatt 1094  T

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Target: scaffold0080 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 31996 - 31940
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||| ||| |||| ||||||    
T  31996 tattaataatactcctttagttgctattattgatactggtgttacgcattattttat 31940  T

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Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 37462 - 37406
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  |||| |||||||||||||||| ||| |||| ||||||    
T  37462 tattaataatactcctttagttgctattattgatactggtgttacgcattattttat 37406  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 424421 - 424365
Alignment:
Q  22 tattaatagtactcctttgtttgcaattattgatactggtgctactcattcttttat 78  Q
    |||||||| |||||||||  || | |||||||||||||||||||| |||| ||||||    
T  424421 tattaataatactcctttagtttctattattgatactggtgctacgcattgttttat 424365  T

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