View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6979_high_9 (Length: 240)
Name: NF6979_high_9
Description: NF6979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6979_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 12889098 - 12888862
Alignment:
| Q |
1 |
taatcttaacataggaaatcacaatgatttcaaatttcacatttatattaagccgtgcttgcttgcaatgttgaaaaatagcagccgtggtggagtgtcg |
100 |
Q |
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| T |
12889098 |
taatcttaacataggaaatctcaatgatttcaaatttcacatttatattaagccgtgcttgcttgcaatgttggaaaatagtagtcgtggtggagtgtcg |
12888999 |
T |
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| Q |
101 |
tggtggatgatgtgccagccgctataggcaatttgtgcagggcacatggcatggcg-----atagatggcaattttggccatccgtcatacaccatcatc |
195 |
Q |
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| T |
12888998 |
tggcggatgatgtgccagccgctacaggcaatttgtgaagggcacatgccatggcgacaccataggtggcagttttggccatccgtcgtacaccatcatc |
12888899 |
T |
|
| Q |
196 |
taccatcctctactccaaacttgaaaattgtgatgtc |
232 |
Q |
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|||||||||||||||||||||||||||||||| |||| |
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| T |
12888898 |
taccatcctctactccaaacttgaaaattgtggtgtc |
12888862 |
T |
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