View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6979_low_9 (Length: 300)

Name: NF6979_low_9
Description: NF6979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6979_low_9
NF6979_low_9
[»] chr5 (38 HSPs)
chr5 (1-300)||(40821327-40821626)
chr5 (1-140)||(9335148-9335287)
chr5 (1-264)||(4694214-4694475)
chr5 (236-300)||(33794022-33794086)
chr5 (236-300)||(34357516-34357580)
chr5 (236-300)||(34359307-34359371)
chr5 (236-300)||(25894878-25894942)
chr5 (236-300)||(30041472-30041536)
chr5 (236-300)||(42150748-42150812)
chr5 (235-293)||(9843286-9843344)
chr5 (236-293)||(2438738-2438795)
chr5 (236-300)||(2156346-2156410)
chr5 (236-300)||(2957788-2957852)
chr5 (236-300)||(2966257-2966321)
chr5 (236-300)||(5876148-5876212)
chr5 (203-276)||(9335349-9335425)
chr5 (236-300)||(22359894-22359958)
chr5 (236-300)||(29414897-29414961)
chr5 (236-292)||(29980397-29980453)
chr5 (236-293)||(4973500-4973557)
chr5 (235-300)||(22313760-22313825)
chr5 (200-264)||(12919150-12919214)
chr5 (236-300)||(40958845-40958909)
chr5 (4-47)||(4973737-4973780)
chr5 (200-263)||(3413490-3413553)
chr5 (4-47)||(12505770-12505813)
chr5 (218-264)||(42729090-42729136)
chr5 (80-151)||(14515373-14515445)
chr5 (1-45)||(30580192-30580236)
chr5 (4-47)||(29980633-29980676)
chr5 (4-47)||(30041249-30041292)
chr5 (4-47)||(34357293-34357336)
chr5 (4-47)||(34359084-34359127)
chr5 (218-264)||(14515511-14515556)
chr5 (1-46)||(32227144-32227188)
chr5 (1-45)||(6270376-6270419)
chr5 (1-45)||(27166731-27166774)
chr5 (1-45)||(34869378-34869421)
[»] chr6 (50 HSPs)
chr6 (1-300)||(7825917-7826216)
chr6 (1-300)||(10800570-10800867)
chr6 (1-300)||(24908350-24908649)
chr6 (1-300)||(14118557-14118854)
chr6 (1-274)||(14122515-14122786)
chr6 (1-264)||(1051181-1051442)
chr6 (1-140)||(18765771-18765910)
chr6 (236-300)||(1428651-1428715)
chr6 (236-300)||(11058378-11058442)
chr6 (236-300)||(30117496-30117560)
chr6 (236-300)||(34711785-34711849)
chr6 (236-300)||(4020464-4020528)
chr6 (236-300)||(4026890-4026954)
chr6 (236-300)||(7062712-7062776)
chr6 (236-300)||(7069928-7069992)
chr6 (236-300)||(21262803-21262867)
chr6 (236-300)||(29906820-29906884)
chr6 (236-300)||(32328721-32328785)
chr6 (236-300)||(34648729-34648793)
chr6 (236-300)||(34655180-34655244)
chr6 (235-300)||(4186615-4186680)
chr6 (236-300)||(9864989-9865053)
chr6 (236-300)||(13672045-13672109)
chr6 (241-300)||(4738557-4738616)
chr6 (236-300)||(27670024-27670088)
chr6 (203-264)||(18765648-18765709)
chr6 (249-300)||(1461193-1461244)
chr6 (1-47)||(14354556-14354602)
chr6 (1-45)||(9846697-9846741)
chr6 (218-300)||(9517822-9517904)
chr6 (4-47)||(27670268-27670311)
chr6 (200-264)||(13105164-13105227)
chr6 (4-47)||(1428428-1428471)
chr6 (4-47)||(11058155-11058198)
chr6 (4-47)||(21262579-21262622)
chr6 (4-47)||(32328498-32328541)
chr6 (4-47)||(34711562-34711605)
chr6 (3-45)||(10081566-10081608)
chr6 (236-300)||(1167723-1167788)
chr6 (218-300)||(34914392-34914479)
chr6 (1-45)||(1455277-1455320)
chr6 (1-45)||(1466969-1467012)
chr6 (220-268)||(11015215-11015263)
chr6 (1-45)||(13173457-13173500)
chr6 (1-45)||(14271158-14271201)
chr6 (190-268)||(14759732-14759812)
chr6 (1-45)||(21596161-21596204)
chr6 (1-45)||(24879351-24879394)
chr6 (236-292)||(31547833-31547889)
chr6 (1-45)||(34914174-34914217)
[»] chr2 (48 HSPs)
chr2 (1-300)||(44611172-44611471)
chr2 (1-300)||(33033681-33033978)
chr2 (1-140)||(43669855-43669995)
chr2 (203-300)||(43669696-43669793)
chr2 (236-300)||(12950726-12950790)
chr2 (236-300)||(13902185-13902249)
chr2 (25-151)||(22600038-22600166)
chr2 (236-300)||(41455536-41455600)
chr2 (236-300)||(2157542-2157606)
chr2 (236-300)||(15852479-15852543)
chr2 (236-300)||(16817557-16817621)
chr2 (236-300)||(16856714-16856778)
chr2 (236-300)||(29484856-29484920)
chr2 (236-300)||(34835040-34835104)
chr2 (236-300)||(34841484-34841548)
chr2 (236-300)||(36782413-36782477)
chr2 (236-300)||(42931600-42931664)
chr2 (236-300)||(43267788-43267852)
chr2 (236-300)||(45011912-45011976)
chr2 (236-300)||(2021676-2021740)
chr2 (236-300)||(2163958-2164022)
chr2 (236-300)||(21332222-21332286)
chr2 (236-300)||(21342110-21342174)
chr2 (236-300)||(36838073-36838137)
chr2 (1-45)||(17784440-17784484)
chr2 (220-300)||(13162738-13162819)
chr2 (1-45)||(17789093-17789137)
chr2 (236-300)||(21068186-21068249)
chr2 (4-47)||(16817335-16817378)
chr2 (4-47)||(16856492-16856535)
chr2 (4-47)||(45700649-45700692)
chr2 (4-47)||(2157786-2157829)
chr2 (4-47)||(2164202-2164245)
chr2 (4-47)||(12950970-12951013)
chr2 (4-47)||(13901962-13902005)
chr2 (236-300)||(17784675-17784741)
chr2 (4-47)||(34834817-34834860)
chr2 (4-47)||(34841261-34841304)
chr2 (4-47)||(36782189-36782232)
chr2 (4-47)||(43268033-43268076)
chr2 (220-300)||(37439703-37439784)
chr2 (1-46)||(42700605-42700649)
chr2 (1-45)||(8679428-8679471)
chr2 (1-45)||(23924665-23924708)
chr2 (1-45)||(27257870-27257913)
chr2 (1-45)||(28457510-28457553)
chr2 (1-45)||(31758763-31758806)
chr2 (1-45)||(32523414-32523457)
[»] chr7 (68 HSPs)
chr7 (1-300)||(41542389-41542688)
chr7 (3-300)||(28442375-28442672)
chr7 (1-300)||(41454913-41455209)
chr7 (1-140)||(9701874-9702013)
chr7 (1-140)||(48455468-48455607)
chr7 (1-140)||(37521881-37522020)
chr7 (1-140)||(43364331-43364470)
chr7 (236-300)||(2446576-2446640)
chr7 (236-300)||(37025978-37026042)
chr7 (203-276)||(43364193-43364269)
chr7 (236-300)||(1378877-1378941)
chr7 (236-300)||(5050140-5050204)
chr7 (236-300)||(5056536-5056600)
chr7 (236-300)||(6021093-6021157)
chr7 (236-300)||(8142674-8142738)
chr7 (236-300)||(23612319-23612383)
chr7 (236-300)||(36875475-36875539)
chr7 (236-297)||(10831354-10831415)
chr7 (236-297)||(11025146-11025207)
chr7 (235-300)||(39432838-39432903)
chr7 (236-300)||(1948862-1948926)
chr7 (236-300)||(3924321-3924385)
chr7 (236-300)||(6795368-6795432)
chr7 (236-300)||(21642452-21642516)
chr7 (236-300)||(48353709-48353773)
chr7 (236-300)||(1941975-1942039)
chr7 (236-300)||(15914568-15914632)
chr7 (236-300)||(19089737-19089801)
chr7 (236-300)||(26601842-26601906)
chr7 (236-300)||(33850871-33850935)
chr7 (236-300)||(45433515-45433579)
chr7 (236-300)||(48347325-48347389)
chr7 (236-287)||(21901418-21901469)
chr7 (218-264)||(5222313-5222359)
chr7 (236-293)||(8185621-8185678)
chr7 (236-293)||(8193181-8193238)
chr7 (218-259)||(9701756-9701797)
chr7 (236-300)||(14287644-14287709)
chr7 (236-300)||(14298829-14298894)
chr7 (236-300)||(15949089-15949153)
chr7 (236-300)||(9643146-9643211)
chr7 (4-47)||(13774135-13774178)
chr7 (3-47)||(20404058-20404102)
chr7 (1-45)||(27951100-27951144)
chr7 (1-45)||(27954262-27954306)
chr7 (4-47)||(1379121-1379164)
chr7 (4-47)||(2446820-2446863)
chr7 (4-47)||(3924098-3924141)
chr7 (4-47)||(5049917-5049960)
chr7 (4-47)||(5056312-5056355)
chr7 (4-47)||(6020869-6020912)
chr7 (4-47)||(6795612-6795655)
chr7 (4-47)||(8142451-8142494)
chr7 (4-47)||(9642921-9642964)
chr7 (4-47)||(14287889-14287932)
chr7 (4-47)||(14299074-14299117)
chr7 (4-47)||(15914812-15914855)
chr7 (4-47)||(15949333-15949376)
chr7 (4-47)||(36875719-36875762)
chr7 (4-47)||(37026222-37026265)
chr7 (206-264)||(29865136-29865193)
chr7 (78-139)||(30879701-30879762)
chr7 (1-45)||(2478146-2478189)
chr7 (1-45)||(2797196-2797239)
chr7 (4-48)||(21642691-21642735)
chr7 (218-297)||(22909820-22909899)
chr7 (1-45)||(29864927-29864971)
chr7 (1-45)||(31882596-31882639)
[»] chr3 (40 HSPs)
chr3 (1-300)||(4674857-4675154)
chr3 (1-300)||(18866708-18867005)
chr3 (5-264)||(4501078-4501335)
chr3 (1-264)||(4506404-4506665)
chr3 (1-128)||(27900624-27900751)
chr3 (236-300)||(3577166-3577230)
chr3 (235-300)||(4590724-4590789)
chr3 (235-300)||(9570777-9570842)
chr3 (235-300)||(9577279-9577344)
chr3 (236-300)||(13014916-13014980)
chr3 (236-300)||(18341520-18341584)
chr3 (236-300)||(23068394-23068458)
chr3 (236-300)||(25893160-25893224)
chr3 (236-300)||(32746300-32746364)
chr3 (236-300)||(43931512-43931576)
chr3 (236-300)||(6036196-6036260)
chr3 (236-300)||(10941532-10941596)
chr3 (40-140)||(545956-546058)
chr3 (235-300)||(4311713-4311778)
chr3 (236-300)||(24179004-24179067)
chr3 (236-300)||(41354298-41354362)
chr3 (236-300)||(43994997-43995063)
chr3 (203-276)||(27900472-27900548)
chr3 (236-293)||(27502196-27502253)
chr3 (236-300)||(41353791-41353855)
chr3 (234-300)||(24899306-24899373)
chr3 (234-300)||(24905772-24905839)
chr3 (200-264)||(20628550-20628614)
chr3 (1-45)||(23194405-23194448)
chr3 (4-47)||(10941309-10941352)
chr3 (4-47)||(23068638-23068681)
chr3 (218-264)||(545834-545879)
chr3 (218-300)||(3589102-3589189)
chr3 (220-300)||(17735313-17735394)
chr3 (220-300)||(19036582-19036663)
chr3 (1-45)||(2785881-2785925)
chr3 (1-45)||(3588886-3588929)
chr3 (1-45)||(20962889-20962932)
chr3 (1-45)||(37471320-37471363)
chr3 (1-45)||(49434583-49434626)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-300)||(9121-9419)
scaffold0045 (1-300)||(2739-3037)
[»] chr1 (54 HSPs)
chr1 (80-300)||(27041112-27041330)
chr1 (4-140)||(9316044-9316180)
chr1 (1-264)||(47293981-47294242)
chr1 (1-140)||(21814901-21815040)
chr1 (1-84)||(27048261-27048344)
chr1 (236-300)||(4599458-4599522)
chr1 (236-300)||(38672996-38673060)
chr1 (236-300)||(42091826-42091890)
chr1 (236-300)||(6238585-6238649)
chr1 (236-300)||(11913489-11913553)
chr1 (236-300)||(26621399-26621463)
chr1 (236-300)||(27240359-27240423)
chr1 (236-300)||(28413902-28413966)
chr1 (236-300)||(31072248-31072312)
chr1 (236-300)||(39053566-39053630)
chr1 (236-300)||(39059938-39060002)
chr1 (236-300)||(43686557-43686621)
chr1 (236-300)||(45015711-45015775)
chr1 (236-300)||(1116212-1116275)
chr1 (236-300)||(1174535-1174599)
chr1 (236-300)||(2825047-2825111)
chr1 (236-296)||(32797670-32797730)
chr1 (203-276)||(9315906-9315982)
chr1 (203-264)||(21814778-21814839)
chr1 (236-293)||(41305743-41305800)
chr1 (236-300)||(5445191-5445255)
chr1 (236-300)||(9869035-9869099)
chr1 (236-300)||(23764660-23764724)
chr1 (236-300)||(29001661-29001725)
chr1 (236-300)||(39805987-39806051)
chr1 (236-300)||(44241287-44241351)
chr1 (236-293)||(41299417-41299474)
chr1 (236-300)||(41297446-41297510)
chr1 (201-264)||(19329334-19329396)
chr1 (92-151)||(44785498-44785557)
chr1 (206-264)||(45620351-45620408)
chr1 (256-296)||(44916264-44916304)
chr1 (218-300)||(15162129-15162211)
chr1 (4-47)||(41297691-41297734)
chr1 (4-47)||(1174780-1174823)
chr1 (4-47)||(4599703-4599746)
chr1 (4-47)||(6238829-6238872)
chr1 (4-47)||(11913267-11913310)
chr1 (4-47)||(26621644-26621687)
chr1 (4-47)||(42092070-42092113)
chr1 (4-47)||(44241531-44241574)
chr1 (4-47)||(45015955-45015998)
chr1 (3-45)||(45620148-45620190)
chr1 (218-300)||(8995634-8995719)
chr1 (235-286)||(3365615-3365667)
chr1 (1-45)||(11738431-11738474)
chr1 (1-45)||(16832416-16832459)
chr1 (1-45)||(44504901-44504944)
chr1 (1-45)||(47646846-47646890)
[»] chr8 (47 HSPs)
chr8 (1-264)||(9906907-9907169)
chr8 (1-248)||(38657220-38657466)
chr8 (1-264)||(2268352-2268613)
chr8 (1-264)||(5064003-5064260)
chr8 (1-140)||(44245907-44246046)
chr8 (235-300)||(7934154-7934219)
chr8 (236-300)||(6464804-6464868)
chr8 (236-300)||(7311279-7311343)
chr8 (236-300)||(8013548-8013612)
chr8 (236-300)||(16710897-16710961)
chr8 (236-300)||(36005710-36005774)
chr8 (236-300)||(36075897-36075961)
chr8 (236-300)||(41242344-41242408)
chr8 (236-300)||(11358422-11358486)
chr8 (236-300)||(15012318-15012382)
chr8 (236-300)||(36022028-36022092)
chr8 (208-276)||(44246113-44246184)
chr8 (236-300)||(12768674-12768738)
chr8 (236-296)||(36425959-36426019)
chr8 (236-300)||(1238143-1238207)
chr8 (256-300)||(31017329-31017373)
chr8 (206-300)||(22226880-22226977)
chr8 (206-300)||(22233222-22233319)
chr8 (1-45)||(14393898-14393942)
chr8 (1-46)||(16959037-16959081)
chr8 (1-45)||(4861584-4861627)
chr8 (200-264)||(24220472-24220536)
chr8 (4-47)||(6464581-6464624)
chr8 (4-47)||(7311523-7311566)
chr8 (4-47)||(8013325-8013368)
chr8 (4-47)||(15012562-15012605)
chr8 (4-47)||(16710673-16710716)
chr8 (4-47)||(26250596-26250639)
chr8 (4-47)||(31017560-31017603)
chr8 (4-47)||(36005487-36005530)
chr8 (4-47)||(36021804-36021847)
chr8 (4-47)||(36076141-36076184)
chr8 (4-47)||(41242121-41242164)
chr8 (1-45)||(12538649-12538692)
chr8 (1-45)||(13510449-13510492)
chr8 (1-45)||(13599979-13600022)
chr8 (1-45)||(17993352-17993395)
chr8 (1-45)||(22222308-22222351)
chr8 (1-45)||(22228650-22228693)
chr8 (1-45)||(22242876-22242919)
chr8 (1-45)||(29337014-29337058)
chr8 (1-45)||(36736839-36736882)
[»] chr4 (38 HSPs)
chr4 (1-260)||(667672-667930)
chr4 (1-140)||(13568113-13568252)
chr4 (1-140)||(23543543-23543682)
chr4 (235-300)||(2947775-2947840)
chr4 (236-300)||(7780337-7780401)
chr4 (236-300)||(8103811-8103875)
chr4 (236-300)||(16405272-16405336)
chr4 (236-300)||(17456784-17456848)
chr4 (236-300)||(27590235-27590299)
chr4 (236-300)||(36755027-36755091)
chr4 (236-300)||(37368543-37368607)
chr4 (236-300)||(48914829-48914893)
chr4 (236-300)||(55463000-55463064)
chr4 (235-300)||(41372916-41372981)
chr4 (236-300)||(13004015-13004079)
chr4 (236-300)||(16838587-16838651)
chr4 (236-300)||(30238190-30238254)
chr4 (203-292)||(23543744-23543836)
chr4 (236-300)||(30211756-30211819)
chr4 (203-276)||(40976797-40976872)
chr4 (218-259)||(13567995-13568036)
chr4 (92-140)||(40976687-40976735)
chr4 (236-300)||(13594035-13594100)
chr4 (4-47)||(7780581-7780624)
chr4 (193-276)||(28588721-28588804)
chr4 (4-47)||(41373161-41373204)
chr4 (78-137)||(24630278-24630338)
chr4 (236-300)||(5660780-5660846)
chr4 (4-47)||(13594282-13594325)
chr4 (4-47)||(30211541-30211584)
chr4 (234-300)||(33110071-33110138)
chr4 (3-47)||(5660553-5660597)
chr4 (1-45)||(26070213-26070256)
chr4 (1-45)||(35416329-35416372)
chr4 (1-45)||(42271862-42271905)
chr4 (1-45)||(42532519-42532562)
chr4 (1-45)||(46691670-46691713)
chr4 (1-45)||(53895864-53895907)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-140)||(202484-202623)
scaffold0012 (203-276)||(202346-202422)
[»] scaffold0265 (2 HSPs)
scaffold0265 (1-140)||(17769-17908)
scaffold0265 (203-264)||(17970-18031)
[»] scaffold0291 (2 HSPs)
scaffold0291 (5-140)||(1711-1852)
scaffold0291 (203-264)||(1914-1975)
[»] scaffold0744 (1 HSPs)
scaffold0744 (236-300)||(6915-6979)
[»] scaffold0043 (2 HSPs)
scaffold0043 (236-300)||(5233-5297)
scaffold0043 (4-47)||(5010-5053)
[»] scaffold0060 (1 HSPs)
scaffold0060 (236-300)||(15101-15165)
[»] scaffold0053 (2 HSPs)
scaffold0053 (236-300)||(49621-49685)
scaffold0053 (236-300)||(55602-55666)
[»] scaffold0343 (1 HSPs)
scaffold0343 (237-300)||(2575-2638)
[»] scaffold0173 (1 HSPs)
scaffold0173 (236-300)||(24474-24538)
[»] scaffold0002 (1 HSPs)
scaffold0002 (236-300)||(99844-99908)
[»] scaffold0513 (2 HSPs)
scaffold0513 (236-300)||(11880-11944)
scaffold0513 (4-47)||(12107-12150)
[»] scaffold0510 (3 HSPs)
scaffold0510 (236-293)||(2789-2846)
scaffold0510 (236-300)||(9110-9174)
scaffold0510 (4-47)||(8886-8929)
[»] scaffold0936 (2 HSPs)
scaffold0936 (236-300)||(3491-3555)
scaffold0936 (4-47)||(3269-3312)
[»] scaffold0147 (1 HSPs)
scaffold0147 (1-44)||(7217-7259)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-45)||(4980-5023)


Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 40821327 - 40821626
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40821327 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 40821426  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40821427 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcgaaaccct 40821526  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40821527 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 40821626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9335148 - 9335287
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  9335148 tcatttggacacgaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatatgcaacactaatccgagaatacgtatgaataggttgat 9335247  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  9335248 gaagtttaatcccagcataatcatttccctgttaactctc 9335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 4694214 - 4694475
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||| |||||||||||||| |||  ||||  ||||||||| ||| ||  || | ||| |||||||||||||||||||||| |||| |||||||||    
T  4694214 tcatttggatacgaatgatgttgttgagtaatatcagataatatcgattaatggttggaatccgcaacactaatccgagaatacacatgagtaggttgat 4694313  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||| |||||||||| |||| ||||||||||||| |  |  ||||   || |||||  | ||||||| |||||  |||||||  || || || |    
T  4694314 gaagtttaatgccaacataataattttcctgttaactctcatatctcttacaagtccgtagt--tttatagttcatgaaacaaaacaatatcgaatcctt 4694411  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||| |||||||   | ||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  4694412 agctcataacgataccgaatgttgaacgacttagaaaatcgcaccagtccttgtgaagacgata 4694475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 33794086 - 33794022
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33794086 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 33794022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 34357516 - 34357580
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34357516 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 34357580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 34359307 - 34359371
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34359307 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 34359371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 25894878 - 25894942
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25894878 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 25894942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 30041472 - 30041536
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30041472 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 30041536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 42150812 - 42150748
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42150812 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 42150748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 9843344 - 9843286
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  9843344 aatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaa 9843286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 2438795 - 2438738
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2438795 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaa 2438738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 2156346 - 2156410
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2156346 atatcacactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 2156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 2957852 - 2957788
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2957852 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatactaca 2957788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 2966321 - 2966257
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2966321 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatactaca 2966257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 5876212 - 5876148
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  5876212 atatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 5876148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 9335349 - 9335425
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    |||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||    
T  9335349 ctcagaacaatatagattgttgaacggcttagattatcgcaccagtccctgtggagacgataacataaatacttact 9335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 22359958 - 22359894
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||| ||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  22359958 atatcacactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 22359894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 29414897 - 29414961
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  |||||||||| |||||||||| ||||||||||||||||||||||||    
T  29414897 atatcgcactagtccctaaggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 29414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 29980453 - 29980397
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaa 292  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29980453 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaa 29980397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 4973557 - 4973500
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||    
T  4973557 atatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaa 4973500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 22313825 - 22313760
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||  |||||||||| |||||||||| |||||||||| |||||||||||||    
T  22313825 aatatcgcactagtccctaaggagacgatacaaatacttacaattgtttgattcaaaaatactaca 22313760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 12919150 - 12919214
Alignment:
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||| ||||||||||  ||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  12919150 tagcttagaacgatatcgattgttgaatggcttagaatatcacaccagtccatgtggagacgata 12919214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 40958845 - 40958909
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||| | ||||||||||||||||||||  |||||||||||||| |||||||||    
T  40958845 atatcgcactagtccccgaggagacgatataaatacttataattgtttgatgcaataatactaca 40958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 4973780 - 4973737
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  4973780 tttggacacgaatgatgttgtcgagggatatgtgataatatcaa 4973737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 3413490 - 3413553
Alignment:
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat 263  Q
    ||||| |||| |||||  |||| |||| ||||||||||||||||||||||| ||||||||||||    
T  3413490 tagcttagaatgatatcgattgctgaatggcttagaatatcgcaccagtccatgtggagacgat 3413553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 12505770 - 12505813
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  12505770 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 12505813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 42729136 - 42729090
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||    
T  42729136 attgttgaatgacttagaatattgcaccagtccctgtggagacgata 42729090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 14515373 - 14515445
Alignment:
Q  80 aatacatatgaa-taggttgatgaagtttaatcccaacataatcatttccctgttaactctcgtcccatttac 151  Q
    |||||||||||| | ||||||||||||| |||||||||||| | |||||| |||||| ||| || ||||||||    
T  14515373 aatacatatgaaatgggttgatgaagttcaatcccaacatactaatttccttgttaattcttgtaccatttac 14515445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30580192 - 30580236
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||    
T  30580192 tcatttggacacgaatgatgtcgtcgaccgatacgtgataatatc 30580236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 29980676 - 29980633
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  29980676 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 29980633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 30041249 - 30041292
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  30041249 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 30041292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34357293 - 34357336
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  34357293 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 34357336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34359084 - 34359127
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  34359084 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 34359127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 14515511 - 14515556
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  14515511 attgttgaacggctt-gaatatcgcactagtccttgtggagacgata 14515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32227144 - 32227188
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatca 46  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||    
T  32227144 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatca 32227188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6270376 - 6270419
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  6270376 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 6270419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27166774 - 27166731
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  27166774 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 27166731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34869421 - 34869378
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  34869421 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 34869378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 288; Significance: 1e-161; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 7826216 - 7825917
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826216 tcatttggatacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 7826117  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7826116 gaagtttaatcctaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcgaaaccct 7826017  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826016 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 7825917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 10800570 - 10800867
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10800570 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 10800669  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  10800670 gaagtttaatcccaacataaccatttccctgttaactctcgtcccatttacctttctgtagttc--tatagtttatgaacaaaaacaacttcgaaaccct 10800767  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10800768 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 10800867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 24908649 - 24908350
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24908649 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattaatagttaggatttgcaacactaatccgagaatacatatgaataggttgat 24908550  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24908549 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtctatgaacaaaaacaacttcgaaaccct 24908450  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24908449 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctatggagacgatataaatacttactattgtttgatgcaaaaatactaca 24908350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 14118557 - 14118854
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  14118557 tcatttggacacgaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatatgtatgaataggttgat 14118656  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    ||| |||||||||||||||||| ||||||||||||||||| | | ||| || |||| |||||  | |||||||||||||| |||||||||||  ||||||    
T  14118657 gaaatttaatcccaacataatcttttccctgttaactctcattctattcacatttccgtagt--tttatagtttatgaaccaaaacaacttcgcaaccct 14118754  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  14118755 agctcagaacgatatgaattgttgaacggcctagaatatcgcaccagtccctatggagacgatacaaatacttaaaattgtttgatgcaaaaatactaca 14118854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 14122515 - 14122786
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  14122515 tcatttggacacgaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatatgtatgaataggttgat 14122614  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    ||| |||||||||||||||||| ||||||||||||||||| | | ||| || |||| |||||  | |||||||||||||| |||||||||||  ||||||    
T  14122615 gaaatttaatcccaacataatcttttccctgttaactctcattctattcacatttccgtagt--tttatagtttatgaaccaaaacaacttcgcaaccct 14122712  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatactta 274  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  14122713 agctcaaaacgatatgaattgttgaacggcctagaatatcgcaccagtccctgtggagacgatacaaatactta 14122786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 1051442 - 1051181
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||| |||||||| ||||||  |||   |||||||||    
T  1051442 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatctgcaaaactaatcctagaatatgtatatgtaggttgat 1051343  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||| ||||||||||||||||||||||||||||||||| |  |  ||||   |  |||||  | ||||||| |||||  |||||||  |  || || |    
T  1051342 gaagttgaatcccaacataatcatttccctgttaactctcatatctcttacaagttcgtagt--tttatagttcatgaaacaaaacaatattgaatcctt 1051245  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||| |||||||   ||||||||||||||||||||||||||||||||||| |||||||||||    
T  1051244 agctcaaaacgatactgattgttgaacggcttagaatatcgcaccagtccctatggagacgata 1051181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 18765910 - 18765771
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||| ||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||   |||||||||    
T  18765910 tcatttagacacaaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatccaagaatacgtatacgtaggttgat 18765811  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  18765810 gaagtttaatcccagcataataatttccctgttaactctc 18765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 1428651 - 1428715
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1428651 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 1428715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 11058378 - 11058442
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11058378 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 11058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 30117496 - 30117560
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30117496 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 30117560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 34711785 - 34711849
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34711785 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 34711849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 4020464 - 4020528
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4020464 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 4020528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 4026890 - 4026954
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4026890 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 4026954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 7062712 - 7062776
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7062712 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 7062776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 7069928 - 7069992
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7069928 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 7069992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 21262803 - 21262867
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  21262803 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 21262867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 29906884 - 29906820
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29906884 atatcgcactagtccctaaggagacgatataaatacttactattgtttgatgcaaaaatactaca 29906820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 32328721 - 32328785
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  32328721 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 32328785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 34648793 - 34648729
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34648793 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 34648729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 34655244 - 34655180
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34655244 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 34655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 4186680 - 4186615
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  4186680 aatatcgcactagtccctgaggagacgatataaatacttacaattgtttgaggcaaaaatactaca 4186615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 9864989 - 9865053
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9864989 atatcgcactagtccctgaggagaagatataaatacttacaattgtttgatgcaaaaatactaca 9865053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 13672045 - 13672109
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  13672045 atatcgcactagtccctaaggagacgagataaatacttactattgtttgatgcaaaaatactaca 13672109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 4738557 - 4738616
Alignment:
Q  241 gcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4738557 gcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 4738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 27670088 - 27670024
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  27670088 atatcgcactagtctctgaggagacgatataaatatttactattgtttgatgcaaaaatattaca 27670024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 18765709 - 18765648
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||||| ||||  ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  18765709 ctcagaacaatatagattgttgaacggcttagaatatcgcactagtccctatggagacgata 18765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 1461244 - 1461193
Alignment:
Q  249 ccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  1461244 ccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattaca 1461193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14354602 - 14354556
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  14354602 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaa 14354556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9846741 - 9846697
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  9846741 tcatttgaacacgaatgatgttgtcgagcgatacgtgataatatc 9846697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 9517904 - 9517822
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| ||||||||| | ||||| ||||||||||||||| |||||||||| ||| |||||  ||||||||||||    
T  9517904 attgttgaatggctt-gaatatcgcgctagtccttgtggagacgatatacaatacttacttttgattgatagaaaaatactaca 9517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 27670311 - 27670268
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  27670311 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 27670268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 13105227 - 13105164
Alignment:
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||| ||||||||||  |||||||||| |||| ||||||| ||||||||| |||||||||||||    
T  13105227 tagcttagaacgatattgattgttgaacagctt-gaatatcacaccagtccatgtggagacgata 13105164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 1428428 - 1428471
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  1428428 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 1428471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 11058155 - 11058198
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  11058155 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 11058198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 21262579 - 21262622
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  21262579 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 21262622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 32328498 - 32328541
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  32328498 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 32328541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34711562 - 34711605
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  34711562 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 34711605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 10081566 - 10081608
Alignment:
Q  3 atttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||||| || |||| ||||||||||||||||||||    
T  10081566 atttggacacgaataatcttgttgagcgatatgtgataatatc 10081608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 1167723 - 1167788
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatat-aaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||| ||||||||||| ||| | |  ||||||||||||||    
T  1167723 atatcgcactagtccctgaggagacgatataaaatacttacttttgatcgtggcaaaaatactaca 1167788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 34914392 - 34914479
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgatat------aaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||||||||      ||||||||||| ||| |||||  ||||||||||||    
T  34914392 attgttgaatggctt-gaatatcgcgctagtccctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactaca 34914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1455277 - 1455320
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  1455277 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 1455320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1466969 - 1467012
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  1466969 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 1467012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 11015263 - 11015215
Alignment:
Q  220 tgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaa 268  Q
    |||||||||| |||  ||||||||| |||||||| ||||||||||||||    
T  11015263 tgttgaacggtttatgatatcgcactagtccctgaggagacgatataaa 11015215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13173500 - 13173457
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  13173500 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 13173457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14271158 - 14271201
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  14271158 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 14271201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 14759732 - 14759812
Alignment:
Q  190 ttcaaaaccct-agctcagaacgatatgaattgttgaacggctta-gaatatcgcaccagtccctgtggagacgatataaa 268  Q
    ||||||||||| | || |||||||||   |||||||||||||||| |||||||| || ||||||| |||| ||||||||||    
T  14759732 ttcaaaacccttaactaagaacgataaccattgttgaacggcttacgaatatcgtactagtccctatggaaacgatataaa 14759812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21596204 - 21596161
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  21596204 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 21596161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24879351 - 24879394
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  24879351 tcatttggacaagaatgatattgtcgagcgat-tgtgataatatc 24879394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 31547889 - 31547833
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaa 292  Q
    ||||||||| |||||||   |||||||||||||||||||  ||||||||||| ||||    
T  31547889 atatcgcactagtccctaaagagacgatataaatacttataattgtttgatgtaaaa 31547833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34914174 - 34914217
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  34914174 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 34914217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 44611471 - 44611172
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44611471 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatttgcaacactaatccgagaatacatatgaataggttgat 44611372  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44611371 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcgaaaccct 44611272  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44611271 agctcagaacgatattaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 44611172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 33033978 - 33033681
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  33033978 tcatttggacacgaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatcggcaacactaatccgagaatatgtatgaataggttgat 33033879  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    ||| |||||||||||||||||| ||||||||||||||||| | | ||| || |||| |||||  | ||||| |||||||| ||||||||||   ||||||    
T  33033878 gaaatttaatcccaacataatcttttccctgttaactctcattctattcacatttccgtagt--tttatagcttatgaaccaaaacaactttgcaaccct 33033781  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  33033780 agctcagaacgatatgaattgttgaacggcctagaatatcgcaccagtccctgtggagatgatacaaatacttacaattgtttgatgcaaaaatactaca 33033681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43669995 - 43669855
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacact-aatccgagaatacatatgaataggttga 99  Q
    |||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||   ||||||||    
T  43669995 tcatttaggcacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacacttaatccgagaatacgtatatgtaggttga 43669896  T
Q  100 tgaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  43669895 tgaagtttaatcccagcataatcatttccctgttaactctc 43669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 43669793 - 43669696
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  43669793 ctcagaatgatatagattgttgaacggcttagaatatcgcaccagtccctatggagacgatataaatatttattattgtttgatgcaaaaatactaca 43669696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 12950790 - 12950726
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12950790 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 12950726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 13902185 - 13902249
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13902185 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 13902249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 22600166 - 22600038
Alignment:
Q  25 cgagcgatatgtgataatatcaattgataattaggatctgcaacactaatcc-gagaatacatatgaat-aggttgatgaagtttaatcccaacataatc 122  Q
    ||||| ||| |||| |||||| | |||||| ||| |||||||| |||||||  |||||||||||| | | |||||||||||||||||||||| |||| ||    
T  22600166 cgagcaatacgtgaaaatatcgagtgataactagaatctgcaatactaatcatgagaatacatataagttaggttgatgaagtttaatcccagcatattc 22600067  T
Q  123 atttccctgttaactctcgtcccatttac 151  Q
    ||||||||||||||||| |||||||||||    
T  22600066 atttccctgttaactcttgtcccatttac 22600038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 41455600 - 41455536
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41455600 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 41455536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 2157606 - 2157542
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2157606 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 2157542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15852543 - 15852479
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15852543 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 15852479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 16817557 - 16817621
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  16817557 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 16817621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 16856714 - 16856778
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  16856714 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 16856778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 29484920 - 29484856
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  29484920 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 29484856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 34835040 - 34835104
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34835040 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 34835104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 34841484 - 34841548
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34841484 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 34841548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 36782413 - 36782477
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  36782413 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 36782477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 42931600 - 42931664
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42931600 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 42931664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 43267852 - 43267788
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  43267852 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 43267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 45011976 - 45011912
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45011976 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 45011912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 2021676 - 2021740
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  2021676 atatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 2021740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 2164022 - 2163958
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  2164022 atatcgcactagtccctgaggagactatataaatacttacaattgtttgatgcaaaaatactaca 2163958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 21332222 - 21332286
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  21332222 atatcgcactagtccctgaggatacgatataaatacttacaattgtttgatgcaaaaatactaca 21332286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 21342110 - 21342174
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| | | ||||||||||||||||| ||||||||||||||||||||||||    
T  21342110 atatcgcactagtccctgagaatacgatataaatacttacaattgtttgatgcaaaaatactaca 21342174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 36838137 - 36838073
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| | |||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  36838137 atatcgcactaatccctaaggagacgatataaatacttacttttgtttgatgcaaaaatactaca 36838073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17784440 - 17784484
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  17784440 tcatttggacacgaatgatgttgtcgagcgatacgtgataatatc 17784484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 13162819 - 13162738
Alignment:
Q  220 tgttgaacggcttagaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||  ||||||||| |||||||| |||||||||||| |||||||||| ||| |||||  ||||||||||||    
T  13162819 tgttgaacggtttatgatatcgcactagtccctgaggagacgatatacaatacttacttttgattgatagaaaaatactaca 13162738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17789093 - 17789137
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  17789093 tcatttggacaggaatgatgttgtcgagcgatacgtgataatatc 17789137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 21068186 - 21068249
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||| | ||||||||||| ||||||||||||    
T  21068186 atatcgcactagtccctgaggagacgatacaaatactt-caattgtttgatgtaaaaatactaca 21068249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 16817335 - 16817378
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  16817335 tttggacacgaatggtgttgtcgagggatatgtgataatatcaa 16817378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 16856492 - 16856535
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  16856492 tttggacacgaatggtgttgtcgagggatatgtgataatatcaa 16856535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 45700649 - 45700692
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  45700649 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 45700692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 2157829 - 2157786
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  2157829 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 2157786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 2164245 - 2164202
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  2164245 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 2164202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 12951013 - 12950970
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  12951013 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 12950970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 13901962 - 13902005
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  13901962 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 13902005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 17784675 - 17784741
Alignment:
Q  236 atatcgcaccagtccctgtggagacg--atataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||  ||||||||||||||| ||| |||||  ||||||||||||    
T  17784675 atatcgcactagtccctgaggagacgatatataaatacttacttttgattgatagaaaaatactaca 17784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34834817 - 34834860
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  34834817 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 34834860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34841261 - 34841304
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  34841261 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 34841304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 36782189 - 36782232
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  36782189 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 36782232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 43268076 - 43268033
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  43268076 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 43268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 37439703 - 37439784
Alignment:
Q  220 tgttgaacggcttagaatatcgcaccagtccctgtggagacgatat-aaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||  ||||||||| ||| |||| ||||||||||| ||| ||||||| ||| |||||  ||||||||||||    
T  37439703 tgttgaacggtttatgatatcgcactagtgcctgaggagacgatataaaacacttacttttgattgatagaaaaatactaca 37439784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42700649 - 42700605
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatca 46  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||    
T  42700649 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatca 42700605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8679471 - 8679428
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  8679471 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 8679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23924708 - 23924665
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  23924708 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 23924665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27257870 - 27257913
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  27257870 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 27257913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28457553 - 28457510
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  28457553 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 28457510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31758763 - 31758806
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  31758763 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 31758806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32523414 - 32523457
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  32523414 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 32523457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 41542688 - 41542389
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41542688 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 41542589  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  41542588 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgcagttctatatagtttatgaacaaaaacaacttcgaaaccct 41542489  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41542488 agctcagaacgatattaattgttgaacgacttagaatatcgcaccaattcctgtggagacgatataaatacttactattatttgatgcaaaaatactaca 41542389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 28442672 - 28442375
Alignment:
Q  3 atttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgatga 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  28442672 atttggacacgaatgatgttgttgagcgatatgtgataatatcaattgataattaagatatgcaacactaatccgagaatacatatgaataggttgatga 28442573  T
Q  103 agtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaact-tcaaaacccta 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | | || ||||  ||    
T  28442572 agtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttc--tatagtttatgaacaaaaaccattatcgaaacttta 28442475  T
Q  202 gctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatat-aaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||| ||  |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  28442474 gctcagaacgacatcgattgttgaactgcttagaatatcgcaccagtccctgaggagacgatataaaatacttacaattgtttgatgcaaaaatactaca 28442375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 41454913 - 41455209
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| |||||| |||||| ||||||| |||   |||||||||    
T  41454913 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacattaatcctagaatacgtatatgtaggttgat 41455012  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||| ||||||||||| |  |  ||||   ||  |||||   ||||||| ||||   |||||||  |  || || |    
T  41455013 gaagtttaatcccaacataatcatttccatgttaactctcatatctcttacaagtccttagtt---tatagttcatgagacaaaacaatattgaatcctt 41455109  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||   |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41455110 agctcagaacgataccgattgttgaacggcttagaatattgcatcagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 41455209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9702013 - 9701874
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||   |||||||||    
T  9702013 tcatttggacatgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatccgagaatacgtatacgtaggttgat 9701914  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  9701913 gaagtttaatcccagcataaccatttccctgttaactctc 9701874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 48455607 - 48455468
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||| |||   |||||||||    
T  48455607 tcatttggatacgaatgatgttgttgagcaatatgtgataatatcaatcgataattagaatccgcatcactaatccgagaatacgtatatttaggttgat 48455508  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  48455507 gaagtttaatcccagcataatcatttccctgttaactctc 48455468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 37522020 - 37521881
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||| ||||||  || | ||| ||||||||||||||| ||||| ||||| |||||||||    
T  37522020 tcatttggatacgaatgatgttgttgagcaatatgtgataatatcgattgatggttggaatccgcaacactaatccgaaaatacgtatgagtaggttgat 37521921  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  37521920 gaagtttaatcccaacataatcatttccgtgttaactctc 37521881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43364470 - 43364331
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||| ||||||||||||| ||| ||| |||   |||||||||    
T  43364470 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcacttgataattagaatccgcaacactaatccaagagtacgtatacgtaggttgat 43364371  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| ||| |||||||| ||||||||||||    
T  43364370 gaagtttaatcccagcatcatcatttctctgttaactctc 43364331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 2446640 - 2446576
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2446640 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 2446576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 37026042 - 37025978
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37026042 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 37025978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 43364269 - 43364193
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  43364269 ctcagaacgatatagattgttgaacggcttagaatatcgcaccagtccctgtggagacgataacataaatacttact 43364193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 1378941 - 1378877
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1378941 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 1378877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 5050140 - 5050204
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  5050140 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 5050204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 5056536 - 5056600
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  5056536 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgaaaaaatactaca 5056600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 6021093 - 6021157
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6021093 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 6021157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 8142674 - 8142738
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8142674 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 8142738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 23612383 - 23612319
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23612383 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 23612319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 36875539 - 36875475
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  36875539 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 36875475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 10831354 - 10831415
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatact 297  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  10831354 atatcgcactagtccttgaggagacgatataaatacttactattgtttgatgcaaaaatact 10831415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 11025146 - 11025207
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatact 297  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  11025146 atatcgcactagtccttgaggagacgatataaatacttactattgtttgatgcaaaaatact 11025207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 39432903 - 39432838
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||    
T  39432903 aatatcgcactagtccttgaggagacgatataaatatttactattgtttgatgcaaaaatactaca 39432838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 1948862 - 1948926
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  1948862 atatcgcactagtctctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 1948926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 3924321 - 3924385
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3924321 atatcgcactaatccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 3924385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 6795432 - 6795368
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  6795432 atatcgcactagtccctgaggagatgatataaatatttactattgtttgatgcaaaaatactaca 6795368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 21642516 - 21642452
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21642516 atatcgcacttgtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 21642452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 48353709 - 48353773
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  48353709 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatactaca 48353773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 1942039 - 1941975
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || |||||||||| |||||||||| ||||||||||||||||||||||||    
T  1942039 atatcgcactagtccttgaggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 1941975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15914632 - 15914568
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| ||||||||||  |||||||||||||||||||||||    
T  15914632 atatcgcactagtccctgaggagacgatacaaatacttacatttgtttgatgcaaaaatactaca 15914568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 19089801 - 19089737
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||    
T  19089801 atatcgcactagtccctgaggagacgatacaaatacttactatagtttgatgcaaaagtactaca 19089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 26601906 - 26601842
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  26601906 atatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgtaaaaatactaca 26601842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 33850871 - 33850935
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  33850871 atatcgcactagtccatgaggagacgatataaatacttaccattttttgatgcaaaaatactaca 33850935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 45433579 - 45433515
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| || ||||  |||||||||||||||||| |||||||||||||||||||||||||||    
T  45433579 atatcgcactagaccctaaggagacgatataaatactcactattgtttgatgcaaaaatactaca 45433515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 48347325 - 48347389
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  48347325 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatattaca 48347389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 21901418 - 21901469
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatg 287  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  21901418 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatg 21901469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 5222359 - 5222313
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  5222359 attgttgaatggcttagaatatcgcaccagtccctgtggagacgata 5222313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 8185621 - 8185678
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  8185621 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaa 8185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 8193181 - 8193238
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  8193181 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaa 8193238  T

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Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 9701797 - 9701756
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggaga 259  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9701797 attgttgaacggcttagaatatcgcaccagtccctgtggaga 9701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 14287709 - 14287644
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactatt-gtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  14287709 atatcgcactagtccctgaggagacgatataaatacttacaattattttgatgcaaaaatactaca 14287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 14298894 - 14298829
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactatt-gtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  14298894 atatcgcactagtccctgaggagacgatataaatacttacaattattttgatgcaaaaatactaca 14298829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15949153 - 15949089
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||| ||| |||||||| |||||||||| |||||||||| ||| ||||||||||||||||||||    
T  15949153 atatcacactagtccctgaggagacgatacaaatacttacaattatttgatgcaaaaatactaca 15949089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 9643146 - 9643211
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgttt-gatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||| ||| |||||||||||||||||    
T  9643146 atatcgcactagtccctgaggagacgatacaaatacttacaattattttgatgcaaaaatactaca 9643211  T

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Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 13774135 - 13774178
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  13774135 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 13774178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 20404058 - 20404102
Alignment:
Q  3 atttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||    
T  20404058 atttgaacacgaatgatgttgttgagcgatatgcgataatatcaa 20404102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27951144 - 27951100
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||| ||||||||||||||||| || |||||||||||||||||    
T  27951144 tcatttagacacgaatgatgttgttgaacgatatgtgataatatc 27951100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27954306 - 27954262
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||||||||||||||| |||  |||||||||||||||    
T  27954306 tcatttggacacgaatgatgttgttgaggaatatgtgataatatc 27954262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 1379164 - 1379121
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  1379164 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 1379121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 2446863 - 2446820
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  2446863 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 2446820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 3924098 - 3924141
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  3924098 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 3924141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 5049917 - 5049960
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  5049917 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 5049960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 5056312 - 5056355
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  5056312 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 5056355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 6020869 - 6020912
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||  |||||||||| ||||||||||||||||||    
T  6020869 tttggacacgaatagtgttgtcgagggatatgtgataatatcaa 6020912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 6795655 - 6795612
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  6795655 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 6795612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 8142451 - 8142494
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  8142451 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 8142494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 9642921 - 9642964
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  9642921 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 9642964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 14287932 - 14287889
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  14287932 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 14287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 14299117 - 14299074
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  14299117 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 14299074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 15914855 - 15914812
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||  |||||||||| ||||||||||||||||||    
T  15914855 tttggacacgaatagtgttgtcgagggatatgtgataatatcaa 15914812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 15949376 - 15949333
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||  |||||||||| ||||||||||||||||||    
T  15949376 tttggacacgaatagtgttgtcgagggatatgtgataatatcaa 15949333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 36875762 - 36875719
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  36875762 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 36875719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 37026265 - 37026222
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  37026265 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 37026222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 29865136 - 29865193
Alignment:
Q  206 agaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||||  ||||||||||| ||| ||||||||||| ||||| |||||||||||||    
T  29865136 agaacgatatcgattgttgaacgactt-gaatatcgcactagtccatgtggagacgata 29865193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 30879762 - 30879701
Alignment:
Q  78 agaatacatatgaa-taggttgatgaagtttaatcccaacataatcatttccctgttaactct 139  Q
    ||||||||| |||| ||||||||||||||||||| |||||||| | ||||| |||||||||||    
T  30879762 agaatacatgtgaaataggttgatgaagtttaat-ccaacatacttatttctctgttaactct 30879701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2478146 - 2478189
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||    
T  2478146 tcatttggacatgaatgatgttgtcgagtgat-tgtgataatatc 2478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2797239 - 2797196
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  2797239 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 2797196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 21642735 - 21642691
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaat 48  Q
    |||||||||||||  |||||||||| |||| ||||||||||||||    
T  21642735 tttggacacgaatagtgttgtcgagggatacgtgataatatcaat 21642691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 22909820 - 22909899
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatact 297  Q
    ||||||||| ||||| ||||||| | | |||||||||||||| |||||| |||||||||| ||| |||||  |||||||||    
T  22909820 attgttgaatggctt-gaatatcacgctagtccctgtggagatgatatacaatacttacttttgattgatagaaaaatact 22909899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29864927 - 29864971
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||    
T  29864927 tcatttggacacgaatgatgctgttgagcgacatgtaataatatc 29864971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31882596 - 31882639
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  31882596 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 31882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 4675154 - 4674857
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  4675154 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaagatctgcaacactaatccgagaatacgtatgaataggttgat 4675055  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||    
T  4675054 gaagtttaatcccaacataatcatttccctgttaactttcgtcccatttacctttctttagttc--tatagtttatgaacaaaaacaacttcgaaaccct 4674957  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  4674956 agctcagaatagtatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 4674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 18867005 - 18866708
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18867005 tcatttggacacgattgatgttgtcgagcaatatgtgataatatcaattgataattaggatctgcaatactaatccgagaatacgtatgaataggttgat 18866906  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| || |||| |||||  | |||||||||||||| |||||||||||| ||||||    
T  18866905 gaagtttaatcccaacataatcatttccctgttaactcttatcccattcacatttccgtagt--tttatagtttatgaaccaaaacaacttcacaaccct 18866808  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18866807 agctcagaacgatatgaattgttgaacggcctagaatatcgcaccagtccctgtggagacgatttaaatacttactattgtttgatgcaaaaatactaca 18866708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 4501335 - 4501078
Alignment:
Q  5 ttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgatgaag 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||   |||||||||||||    
T  4501335 ttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatcctagaatacgtatatgtaggttgatgaag 4501236  T
Q  105 tttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccctagct 204  Q
    |||||||||||||||||||||||| ||||||||||| |  |  ||||   ||||||||  | ||||||| |||||  |||| ||  || || || |||||    
T  4501235 tttaatcccaacataatcatttccttgttaactctcatatctcttacaagtctgtagt--tttatagttcatgaaacaaaaaaatatcgaatccttagct 4501138  T
Q  205 cagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||||   ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  4501137 cagaacgatactgattgttgaacggcttagaatatcgcactagtccatgtggagacgata 4501078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 4506665 - 4506404
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||   |||||||||    
T  4506665 tcatttggacacgaatgatgttgttgagcaatatttgataatatcaattgataattagaatccgcaacactaatcctagaatacgtatatctaggttgat 4506566  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||| |  |  ||||   ||||||||  | ||| ||| |||||  |||||||  || || |  |    
T  4506565 gaagtttaatcccaacataatcatttccctgttaactctcatatctcttacaagtctgtagt--tttatggttcatgaaacaaaacaatgtcgaatctgt 4506468  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||| |||||||||   ||||||||||||||||||||||||||||| | |||||||||| ||||    
T  4506467 agcttagaacgataccgattgttgaacggcttagaatatcgcaccaattcctgtggagatgata 4506404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27900751 - 27900624
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||   |||||||||||||||||||| |||   |||||||||    
T  27900751 tcatttggacacgaatgacgttgttgagcaatatgtgataatatcaattgataattagaatacacaacactaatccgagaatacgtatacgtaggttgat 27900652  T
Q  101 gaagtttaatcccaacataatcatttcc 128  Q
    |||||||||||| | |||||||||||||    
T  27900651 gaagtttaatcctagcataatcatttcc 27900624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 3577166 - 3577230
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3577166 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 3577230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 4590789 - 4590724
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4590789 aatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 4590724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 9570777 - 9570842
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9570777 aatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 9570842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 9577279 - 9577344
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9577279 aatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 9577344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 13014980 - 13014916
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13014980 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 13014916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 18341520 - 18341584
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18341520 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 18341584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 23068458 - 23068394
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  23068458 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 23068394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 25893224 - 25893160
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25893224 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 25893160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 32746364 - 32746300
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  32746364 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 32746300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 43931576 - 43931512
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  43931576 atatcgcactagtccctaaggagacgatataaatacttactattgtttgatgcaaaaatactaca 43931512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 6036260 - 6036196
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  6036260 atatcgcactagtccctgaggagacgatataaatacttacaattatttgatgcaaaaatactaca 6036196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 10941532 - 10941596
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||||||||    
T  10941532 atatcgcactagtccttgaggagacgatataaatacttactattggttgatgcaaaaatactaca 10941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 546058 - 545956
Alignment:
Q  40 aatatcaattgataattaggatctgcaacactaatcc-gagaatacatatgaat-aggttgatgaagtttaatcccaacataatcatttccctgttaact 137  Q
    |||||||| |||||| ||| |||||||| | |||||  |||||||||||| | | |||||||||||||||||||||| |||| |||||||||||||||||    
T  546058 aatatcaagtgataactagaatctgcaatattaatcatgagaatacatataagttaggttgatgaagtttaatcccagcatattcatttccctgttaact 545959  T
Q  138 ctc 140  Q
    |||    
T  545958 ctc 545956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 4311713 - 4311778
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||||||||    
T  4311713 aatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgttgcaaaaatactaca 4311778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 24179067 - 24179004
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  24179067 atatcgcactagtcc-tgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 24179004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 41354298 - 41354362
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||||||    
T  41354298 atatcgcactagtccttgaggagacgatataaatacttgcaattgtttgatgcaaaaatactaca 41354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 43995063 - 43994997
Alignment:
Q  236 atatcgcaccagtccctgtggagac--gatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||    
T  43995063 atatcgcactagtccctgaggagacacgatataaatacttacttttgtttgatgcaaaaatactaca 43994997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 27900548 - 27900472
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||| |||||| |||||   |||||||||||||    
T  27900548 ctcagaacgatatagattattgaacggcttagaatatcgcaccagtccatgtggaaacgataacataaatacttact 27900472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 27502196 - 27502253
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  27502196 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaa 27502253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 41353855 - 41353791
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  | |||||||| |||||||||| ||||||||||||||||||||||||    
T  41353855 atatcgcactagtccctaagaagacgatacaaatacttacaattgtttgatgcaaaaatactaca 41353791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 24899373 - 24899306
Alignment:
Q  234 gaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||  ||||||||||||    
T  24899373 gaatatcgcactagtccctgtggagacgatatacaatacttacttttgattgatagaaaaatactaca 24899306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 24905839 - 24905772
Alignment:
Q  234 gaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||  ||||||||||||    
T  24905839 gaatatcgcactagtccctgtggagacgatatacaatacttacttttgattgatagaaaaatactaca 24905772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 20628550 - 20628614
Alignment:
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||| ||||||||||  ||||||||| ||||||||||| |||| |||| |||||||||||||||    
T  20628550 tagcttagaacgatatcgattgttgaatggcttagaataccgcatcagtacctgtggagacgata 20628614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23194405 - 23194448
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  23194405 tcatttggacacgaatgatgttgtcgagtgat-tgtgataatatc 23194448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 10941309 - 10941352
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  10941309 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 10941352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 23068681 - 23068638
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  23068681 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 23068638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 545879 - 545834
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||    
T  545879 attgttgaacggctt-gaatattgcaccagttcctgtggagacgata 545834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 3589102 - 3589189
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgatat------aaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||||||||||      ||||||||||| ||| |||||  ||||||||||||    
T  3589102 attgttgaatggctt-gaatatcgcactagtccctgttgagacgatatacacaaaaatacttacttttgattgatagaaaaatactaca 3589189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 17735394 - 17735313
Alignment:
Q  220 tgttgaacggcttagaatatcgcaccagtccctgtggagacgat-ataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||   ||| |||| |||||||| ||||||||| | ||||||||||||||| |||||  ||||||||||||    
T  17735394 tgttgaacgggttatggtattgcactagtccctgaggagacgattacaaatacttactattgattgatagaaaaatactaca 17735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 19036663 - 19036582
Alignment:
Q  220 tgttgaacggcttagaatatcgcaccagtccctgtggagacgat-ataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||   ||| |||| |||||||| ||||||||| | ||||||||||||||| |||||  ||||||||||||    
T  19036663 tgttgaacgggttatggtattgcactagtccctgaggagacgattacaaatacttactattgattgatagaaaaatactaca 19036582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2785925 - 2785881
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||| |||||| |||||||| |||| |||||||||||    
T  2785925 tcatttggacacaaatgattttgtcgagggatacgtgataatatc 2785881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3588886 - 3588929
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  3588886 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 3588929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20962932 - 20962889
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  20962932 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 20962889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37471363 - 37471320
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  37471363 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 37471320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49434583 - 49434626
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  49434583 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 49434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 9121 - 9419
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaa-tccgagaatacatatgaataggttga 99  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  9121 tcatttggacactaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatccgcaacactaaatccgagaatacgtatgaataggttga 9220  T
Q  100 tgaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccc 199  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||  ||||||||||  |||||| | |  || ||    
T  9221 tgaattttaatcccaacataatcatttccctgttaactctcatcccattcacatttctgtagttttata--gtttatgaaccgaaacaattccgcaatcc 9318  T
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactac 299  Q
     |||||||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  9319 gagctcagaacgatatgaattgttgaatggcctagaatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactac 9418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 2739 - 3037
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaa-tccgagaatacatatgaataggttga 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  2739 tcatttggacacgaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatccgcaacactaaatccgagaatacgtatgaataggttga 2838  T
Q  100 tgaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccc 199  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||  | ||||||||||||||  |||||| | |  || ||    
T  2839 tgaattttaatcccaacataatcatttccctgttaactctcatcccattcacatttctgtagt--tttatagtttatgaaccgaaacaattccgcaatcc 2936  T
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactac 299  Q
     |||||||||||||||||||||||||| ||| ||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  2937 gagctcagaacgatatgaattgttgaatggcctagaatatcgcattagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattac 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 1e-81; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 27041330 - 27041112
Alignment:
Q  80 aatacatatgaataggttgatgaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaa 179  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||  |||||||||    
T  27041330 aatacgtatgtataggttgatgaagtttaatcccaacataatcatttccctgttaactctcatcccatttacgtttctgtagttttata--gtttatgaa 27041233  T
Q  180 caaaaacaacttcaaaaccctagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttactatt 279  Q
    | ||||||| |||  ||||||||||||||  |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  27041232 ccaaaacaatttcgcaaccctagctcagattgatatgaattgttgaacggcctagaatatcacaccaatccctgtggagacgatataaatacttactatt 27041133  T
Q  280 gtttgatgcaaaaatactaca 300  Q
    |||||||||||||||||||||    
T  27041132 gtttgatgcaaaaatactaca 27041112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 9316180 - 9316044
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgatgaa 103  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||   ||||||||||||    
T  9316180 tttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatccgagaatacgtatacgtaggttgatgaa 9316081  T
Q  104 gtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||| || |||||||||||||||||||||||||    
T  9316080 gtttaatctcagcataatcatttccctgttaactctc 9316044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 47294242 - 47293981
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||  ||||||||||||  ||||||| |||   ||||| |||    
T  47294242 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaattcgcaacactaatcttagaatacgtatatgtaggtcgat 47294143  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    ||||||||||| |||||||||||||||||||||||||||| |  |  | ||   || |||||  | ||||||| |||||  ||||||   || || || |    
T  47294142 gaagtttaatctcaacataatcatttccctgttaactctcatatctctcacaagtccgtagt--tttatagttcatgaaacaaaacagtatcgaatcctt 47294045  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||||||||   ||||||||||||||||||||||| || |||| | |||||||||||||    
T  47294044 agctcagaacgataccgattgttgaacggcttagaatatcacatcagttcatgtggagacgata 47293981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 21815040 - 21814901
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||| ||| ||||||| |||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||   ||| |||||    
T  21815040 tcatttggacacaaataatgttgttgagaaatatgtgataatatcaattgataattagaatccgcaacactaatccgagaatacgtatacgtagattgat 21814941  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  21814940 gaagtttaatcccagcataatcatttccctgttaactctc 21814901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27048344 - 27048261
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatac 84  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27048344 tcatttggacacgaatgatgttgtcgagcaatatgtgataatatcaattgataattaggatctccaacactaatccgagaatac 27048261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 4599522 - 4599458
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4599522 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 4599458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 38672996 - 38673060
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38672996 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 38673060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 42091890 - 42091826
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42091890 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 42091826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 6238649 - 6238585
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6238649 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 6238585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 11913489 - 11913553
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  11913489 atatcgcactagtccatgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 11913553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 26621463 - 26621399
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  26621463 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 26621399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 27240359 - 27240423
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27240359 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 27240423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 28413902 - 28413966
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  28413902 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatattaca 28413966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 31072312 - 31072248
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  31072312 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaactactaca 31072248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 39053566 - 39053630
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  39053566 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 39053630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 39059938 - 39060002
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  39059938 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 39060002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 43686621 - 43686557
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  43686621 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 43686557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 45015775 - 45015711
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45015775 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 45015711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 1116212 - 1116275
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  1116212 atatcgcactagtccctgaggagacgatataaatactta-tattgtttgatgcaaaaatactaca 1116275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 1174599 - 1174535
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1174599 atatcgcactagtccctgaggagatgatataaatacttacaattgtttgatgcaaaaatactaca 1174535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 2825047 - 2825111
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  2825047 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattaca 2825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 32797730 - 32797670
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatac 296  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  32797730 atatcgcactagtctctgaggagacgatataaatacttactattgtttgatgcaaaaatac 32797670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 9315982 - 9315906
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    |||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||   |||||||||||||    
T  9315982 ctcagaacgatatagattgttgaacgacttagaatatcgcatcagtccctgtggagacgataacataaatacttact 9315906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 21814839 - 21814778
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||||| ||||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21814839 ctcagaacaatatagattgttgaacggcgtagaatatcgcaccagtccctgtggagacgata 21814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 41305743 - 41305800
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  41305743 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaa 41305800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 5445191 - 5445255
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  5445191 atatcgcactagtctctgaggagacaatataaatacttactattgtttgatgcaaaaataataca 5445255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 9869099 - 9869035
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||| | ||| |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  9869099 atatcgcgctagttcctgaggagacaatataaatacttactattgtttgatgcaaaaatactaca 9869035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 23764660 - 23764724
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||    
T  23764660 atatcgcactagtccctgaggagacgatacaaacacttacaattgtttgatgcaaaaatactaca 23764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 29001725 - 29001661
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||| | |||||||||| |||||||||| ||||||||||||||||||||||||    
T  29001725 atatcgcactagtcccggaggagacgatacaaatacttacaattgtttgatgcaaaaatactaca 29001661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 39806051 - 39805987
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  | ||||||||||||||||||| ||||||||||||||||||||||||    
T  39806051 atatcgcactagtccctaagaagacgatataaatacttaccattgtttgatgcaaaaatactaca 39805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 44241351 - 44241287
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||  ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  44241351 atatcgcaatagttcctgaggagacgatataaatatttactattgtttgatgcaaaaatactaca 44241287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 41299417 - 41299474
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  41299417 atatcgcactagtccctgaggagacgatacaaatacttagtattgtttgatgcaaaaa 41299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 41297510 - 41297446
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || |||||||||| |||||||||| ||| ||||||||||||||||||||    
T  41297510 atatcgcactagtccttgaggagacgatagaaatacttacaattatttgatgcaaaaatactaca 41297446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 19329396 - 19329334
Alignment:
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||| ||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  19329396 agcttagaacaatatcgattgttgaacggctt-gaatatcgcaccagtccctgtggagacgata 19329334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 44785557 - 44785498
Alignment:
Q  92 taggttgatgaagtttaatcccaacataatcatttccctgttaactctcgtcccatttac 151  Q
    ||||||||||||||||||||||| |||| |||||||| |||| ||||| |||||||||||    
T  44785557 taggttgatgaagtttaatcccagcatattcatttccgtgtttactcttgtcccatttac 44785498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 45620351 - 45620408
Alignment:
Q  206 agaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  45620351 agaacgatatcaattgttgaacggcttagaatatcgcatcagtccc-gtggagatgata 45620408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 44916304 - 44916264
Alignment:
Q  256 gagacgatataaatacttactattgtttgatgcaaaaatac 296  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  44916304 gagacgatataaatacttacttttgtttgatgcaaaaatac 44916264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 15162129 - 15162211
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||||||||| |||||||||| | | |||||  ||||||||||||    
T  15162129 attgttgaatggctt-gaatatcgcgctagtccctgtggagacgatatacaatacttactttcgattgatagaaaaatactaca 15162211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 41297734 - 41297691
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  41297734 tttggacacgaatggtgttgtcgagggatatgtgataatatcaa 41297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 1174823 - 1174780
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  1174823 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 1174780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 4599746 - 4599703
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  4599746 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 4599703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 6238872 - 6238829
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  6238872 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 6238829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 11913267 - 11913310
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  11913267 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 11913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 26621687 - 26621644
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  26621687 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 26621644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 42092113 - 42092070
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  42092113 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 42092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 44241574 - 44241531
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  44241574 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 44241531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 45015998 - 45015955
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  45015998 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 45015955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 45620148 - 45620190
Alignment:
Q  3 atttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  45620148 atttggacacgaataatcttgtcgagcgatacgtgataatatc 45620190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 8995719 - 8995634
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggagacgat----ataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||||||    | ||||||||||| ||| |||||  ||||||||||||    
T  8995719 attgttgaatggctt-gaatatcgcgctagtccctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactaca 8995634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 3365667 - 3365615
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgat 286  Q
    |||||||| | ||||||||||||||||||||| |||||||||| ||| |||||    
T  3365667 aatatcgcgctagtccctgtggagacgatatacaatacttacttttgattgat 3365615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11738474 - 11738431
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  11738474 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 11738431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16832459 - 16832416
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  16832459 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 16832416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44504944 - 44504901
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  44504944 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 44504901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47646890 - 47646846
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||| |||| |||||||||||||||| |||| |||||||||||    
T  47646890 tcatttagacatgaatgatgttgtcgagggatacgtgataatatc 47646846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9906907 - 9907169
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||   |||||||||    
T  9906907 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatccgagaatacgtatacgtaggttgat 9907006  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccc- 199  Q
    ||||| |||||||||||||| |||||||||||||| ||||    | ||||   ||   ||||  | | |||||||||||  |||||||  || ||||||     
T  9907007 gaagtgtaatcccaacataaccatttccctgttaaatctcaaatcttttataatttcatagt--tttctagtttatgaaacaaaacaatctcgaaaccct 9907104  T
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||| ||| ||||  |||||||||||||||| |||||||||||||||| |||||||||||||    
T  9907105 tagctcataacaatatcgattgttgaacggcttataatatcgcaccagtccatgtggagacgata 9907169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 38657466 - 38657220
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||   |||||||||    
T  38657466 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatcctaaaatacatatatgtaggttgat 38657367  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||| ||| ||||||||| |     ||||   || |||||  | |||||||||||||  |||||||  || || || |    
T  38657366 gaagtttaatcccaacataatcattttcctattaactctcatatatcttacaagtccgtagt--tttatagtttatgaaacaaaacaatatcgaatcctt 38657269  T
Q  201 agctcagaacgatatgaattgttgaacggctt-agaatatcgcaccagt 248  Q
    ||||||||||||||   ||| ||||||||||| ||||||||||||||||    
T  38657268 agctcagaacgataccgattattgaacggcttaagaatatcgcaccagt 38657220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 2268352 - 2268613
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||| | || ||||||||||| ||||  |||||||||||||| ||||||  || | ||||||||||||||| ||||||||  ||||| |||||||||    
T  2268352 tcatttgaataccaatgatgttgttgagcagtatgtgataatatcgattgatggttggaatctgcaacactaattcgagaatatgtatgagtaggttgat 2268451  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||| |  |  ||||   || |||||  | ||||||| |||||  |||||||  |  || || |    
T  2268452 gaagtttaatcccaacataatcatttccctgttaactctcatatctcttacaagtccgtagt--tttatagttcatgaaacaaaacaatattgaatcctt 2268549  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  2268550 agctcagaacgataccgattgttgaacggcttagaatatcgcactagtccctatggagacgata 2268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 5064003 - 5064260
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||| ||| |||||||||||||| |||| ||||||||||||||    |||||||||| ||| ||||||||||||||||||||| |||   |||||||||    
T  5064003 tcattaggatacgaatgatgttgttgagcaatatgtgataatat----tgataattagaatccgcaacactaatccgagaatacgtatatttaggttgat 5064098  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccct 200  Q
    |||||||||||||| |||||||||||||||||||||||||    |  ||||   || |||||  | ||||||| |||||  |||||||  || || || |    
T  5064099 gaagtttaatcccagcataatcatttccctgttaactctcaaatctcttacaagtccgtagt--tttatagttcatgaaacaaaacaatatcgaatcctt 5064196  T
Q  201 agctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||| |||||||   ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  5064197 agctcataacgataccgattgttgaacggcttagaatatcgcaccaatccctgtgaagacgata 5064260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44245907 - 44246046
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||| |||||||||||| ||   ||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||| |||   |||||||||    
T  44245907 tcatttggacatgaatgatgttgttgaagaatatgtgataatatcaattgatagttagaatccgcaacactaatccaagaatacgtatatgtaggttgat 44246006  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  44246007 gaagtttaatcccagtataatcatttccctgttaactctc 44246046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 7934154 - 7934219
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7934154 aatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 7934219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 6464804 - 6464868
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6464804 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 6464868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 7311343 - 7311279
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7311343 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 7311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 8013548 - 8013612
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8013548 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 8013612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 16710897 - 16710961
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16710897 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 16710961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 36005710 - 36005774
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36005710 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 36005774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 36075961 - 36075897
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36075961 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 36075897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 41242344 - 41242408
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41242344 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 41242408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 11358422 - 11358486
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11358422 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 11358486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15012382 - 15012318
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15012382 atatcgcactagtccctgaggagacgatataaatacttactattgtgtgatgcaaaaatactaca 15012318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 36022028 - 36022092
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  36022028 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 36022092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 44246113 - 44246184
Alignment:
Q  208 aacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  44246113 aacgatatatattgttgaacggcttagaatatcgcaccagtccctgtggagacgataacataaatacttact 44246184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 12768738 - 12768674
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12768738 atatcgcactagtctctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 12768674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 36425959 - 36426019
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatac 296  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  36425959 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatac 36426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 1238207 - 1238143
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  1238207 atatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatattaca 1238143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 31017373 - 31017329
Alignment:
Q  256 gagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  31017373 gagacgatataaatacttactattgtttgatacaaaaatactaca 31017329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 22226977 - 22226880
Alignment:
Q  206 agaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat----ataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| ||||||| || ||||| ||||||||||| ||||||||||||||||||    | ||||||||||| ||| |||||  ||||||||||||    
T  22226977 agaacgatattaattgttaaatggctt-gaatatcgcactagtccctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactaca 22226880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 22233319 - 22233222
Alignment:
Q  206 agaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat----ataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| ||||||| || ||||| ||||||||||| ||||||||||||||||||    | ||||||||||| ||| |||||  ||||||||||||    
T  22233319 agaacgatattaattgttaaatggctt-gaatatcgcactagtccctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactaca 22233222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14393942 - 14393898
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  14393942 tcatttggacacgaatgattttgtcgagcgatacgtgataatatc 14393898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16959037 - 16959081
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatca 46  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  16959037 tcatttggacacgaatgatgttgtcgagtgat-tgtgataatatca 16959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4861627 - 4861584
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  4861627 tcatttggacacgaatgatgttgtcgagtgat-tgtgataatatc 4861584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 24220472 - 24220536
Alignment:
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    ||||| ||||||||||  ||||||||| |||||| ||||||||||||||| || |||||| ||||    
T  24220472 tagcttagaacgatatcgattgttgaatggcttaaaatatcgcaccagtctctatggagatgata 24220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 6464581 - 6464624
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  6464581 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 6464624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 7311566 - 7311523
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  7311566 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 7311523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 8013325 - 8013368
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  8013325 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 8013368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 15012605 - 15012562
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  15012605 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 15012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 16710673 - 16710716
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  16710673 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 16710716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 26250596 - 26250639
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||||| |||||||| |||| |||||||||||||    
T  26250596 tttggacacgaatgatattgtcgagggatacgtgataatatcaa 26250639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 31017603 - 31017560
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  31017603 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 31017560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 36005487 - 36005530
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  36005487 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 36005530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 36021804 - 36021847
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  36021804 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 36021847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 36076184 - 36076141
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  36076184 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 36076141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 41242121 - 41242164
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  41242121 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 41242164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12538649 - 12538692
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  12538649 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 12538692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13510449 - 13510492
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  13510449 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 13510492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13599979 - 13600022
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  13599979 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 13600022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17993352 - 17993395
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||    
T  17993352 tcatttggacacgaatgatgttgtcaagtgat-tgtgataatatc 17993395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22222351 - 22222308
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  22222351 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 22222308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22228693 - 22228650
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  22228693 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 22228650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22242919 - 22242876
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  22242919 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 22242876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29337014 - 29337058
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    |||||| ||||||||||||||||||| | |||| |||||||||||    
T  29337014 tcatttagacacgaatgatgttgtcgggtgatacgtgataatatc 29337058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36736882 - 36736839
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  36736882 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 36736839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 667672 - 667930
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||  |||||||||||||||||||| |||   |||||||||    
T  667672 tcatttggacacgaatgatgttgttgagcaatatgtgataatatcaattgataattataatccacaacactaatccgagaatacgtatatgtaggttgat 667771  T
Q  101 gaagtttaatcccaacataatcatttccctgtt-aactctcgtcccatttacctttctgtagttctatatagtttatgaacaaaaacaacttcaaaaccc 199  Q
    ||||||||||| || |||||||||||||||||| ||||||| |  |  ||||   || |||||  | ||||||| |||||  |||||||  || || |      
T  667772 gaagtttaatctcagcataatcatttccctgttaaactctcatatctcttacaaatccgtagt--tttatagttcatgaaacaaaacaatatcgaatcat 667869  T
Q  200 tagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagac 260  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||    
T  667870 tagctcagaacgatatcgattgttgaacggcttagaatatcgcatcagtccctatggagac 667930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 13568252 - 13568113
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||   |||||||||    
T  13568252 tcatttggacatgaatgatgttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatcctagaatacgtatacgtaggttgat 13568153  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  13568152 gaagtttaatcccagcataaccatttccctgttaactctc 13568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23543543 - 23543682
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||| ||| |||||||| ||  |||||||| ||    |||||||||    
T  23543543 tcatttggacacgaatgatgttgttgagcaatatgcgataatagcaattgataattagaatccgcaacactgatatgagaatacgtacacgtaggttgat 23543642  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  23543643 gaagtttaatcccaacataatcattttcctgttaactctc 23543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 2947840 - 2947775
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2947840 aatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 2947775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 7780401 - 7780337
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7780401 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 7780337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 8103875 - 8103811
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8103875 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 8103811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 16405336 - 16405272
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  16405336 atatcgcactagtccctaaggagacgatataaatacttactattgtttgatgcaaaaatactaca 16405272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 17456848 - 17456784
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17456848 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 17456784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 27590299 - 27590235
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27590299 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 27590235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 36755027 - 36755091
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  36755027 atatcgcactagtccatgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 36755091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 37368543 - 37368607
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37368543 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 37368607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 48914893 - 48914829
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  48914893 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 48914829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 55463000 - 55463064
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  55463000 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 55463064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 41372981 - 41372916
Alignment:
Q  235 aatatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  41372981 aatatcgcactagtccctgaggagacgatataaatacttgcaattgtttgatgcaaaaatactaca 41372916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 13004015 - 13004079
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  13004015 atatcgcactagtccctgaggagacgatataaatacttaatattgtttgatgctaaaatactaca 13004079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 16838587 - 16838651
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  16838587 atatcgcactagtccttgaggagaagatataaatacttactattgtttgatgcaaaaatactaca 16838651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 30238254 - 30238190
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30238254 atatcgcactagtccttgaggagacgatataaatacttacaattgtttgatgcaaaaatactaca 30238190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 23543744 - 23543836
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttactattgtttgatgcaaaa 292  Q
    |||||||| ||||  ||||  ||||||||||||||||||||||||| ||||||||||||||   ||||||| ||||| |||||||||||||||    
T  23543744 ctcagaacaatatagattgccgaacggcttagaatatcgcaccagttcctgtggagacgataacataaatatttacttttgtttgatgcaaaa 23543836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 30211756 - 30211819
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  30211756 atatcgcactagtccctgagaagacgatataaatacttactatt-tttgatgcaaaaatactaca 30211819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 40976797 - 40976872
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| |||   |||||||||||||    
T  40976797 ctcagaacgatatagattgttgaacggctta-aatatcgcaccagtccctgtggagaagataacataaatacttact 40976872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 13568036 - 13567995
Alignment:
Q  218 attgttgaacggcttagaatatcgcaccagtccctgtggaga 259  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13568036 attgttgaacggcttagaatatcgcaccagtccctgtggaga 13567995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 40976687 - 40976735
Alignment:
Q  92 taggttgatgaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  40976687 taggttgatgaagtttaatcccagcataaccatttccctgttaactctc 40976735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 13594100 - 13594035
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgttt-gatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||| ||| |||||||||||||||||    
T  13594100 atatcgcactagtccctgaggagacgatacaaatacttacaattattttgatgcaaaaatactaca 13594035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 7780624 - 7780581
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  7780624 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 7780581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 28588804 - 28588721
Alignment:
Q  193 aaaaccctagctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgatataaatacttact 276  Q
    ||||||||| || |||||||||  ||||||||||||||||| |||||||||  | ||||||| || ||||||| || |||||||    
T  28588804 aaaaccctaacttagaacgataacaattgttgaacggcttataatatcgcattaatccctgtagaaacgatattaaaacttact 28588721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 41373204 - 41373161
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  41373204 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 41373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 24630278 - 24630338
Alignment:
Q  78 agaatacatatgaa-taggttgatgaagtttaatcccaacataatcatttccctgttaact 137  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||  || |||||||||    
T  24630278 agaatacatgtgaaataggttgatgaagtttaatcccaacatactcacatctctgttaact 24630338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 5660780 - 5660846
Alignment:
Q  236 atatcgcaccagtccctgtggagacg--atataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||  ||||||||| ||||| |||||||| | ||||||||||||    
T  5660780 atatcgcactagtccctgaggagacgatatataaatagttacttttgtttgaaggaaaaatactaca 5660846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 13594325 - 13594282
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  13594325 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 13594282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 30211541 - 30211584
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  30211541 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 30211584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 33110138 - 33110071
Alignment:
Q  234 gaatatcgcaccagtccctgtggagacgatata-aatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| | ||||| ||||||||||||||| |||||||||| ||| |||||  ||||||||||||    
T  33110138 gaatatcgcgctagtccatgtggagacgatatacaatacttacttttgattgatagaaaaatactaca 33110071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 5660553 - 5660597
Alignment:
Q  3 atttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||| |||||||| |||| ||||| |||||||    
T  5660553 atttggacacgaatgatattgtcgagggatacgtgattatatcaa 5660597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26070213 - 26070256
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  26070213 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 26070256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35416372 - 35416329
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  35416372 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 35416329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42271862 - 42271905
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  42271862 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 42271905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42532562 - 42532519
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  42532562 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 42532519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46691713 - 46691670
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  46691713 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 46691670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53895864 - 53895907
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  53895864 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 53895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 202623 - 202484
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||| ||| ||||| ||||||||||||||| |||   |||||||||    
T  202623 tcatttggacacgaatgatgttgttgagcaatatgtgataataccaattgagaattagaatccgcaacgctaatccgagaatacgtatatgtaggttgat 202524  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  202523 gaagtttaatcccaacataatcatttccctgttaactctc 202484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 202422 - 202346
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgat---ataaatacttact 276  Q
    |||| ||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||   |||||||||||||    
T  202422 ctcataacgatatcgattgttgaaccgcttagaatgtcgcaccagtccctgtggagacgataacataaatacttact 202346  T

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Target: scaffold0265 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17769 - 17908
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatacatatgaataggttgat 100  Q
    |||||||||||| ||| ||||||| |||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||   ||| |||||    
T  17769 tcatttggacacaaataatgttgttgagaaatatgtgataatatcaattgataattagaatccgcaacactaatccgagaatacgtatacgtagattgat 17868  T
Q  101 gaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  17869 gaagtttaatcccagcataatcatttccctgttaactctc 17908  T

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Target: scaffold0265; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 17970 - 18031
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||||| ||||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  17970 ctcagaacaatatagattgttgaacggcgtagaatatcgcaccagtccctgtggagacgata 18031  T

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Target: scaffold0291 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 1711 - 1852
Alignment:
Q  5 ttggacacgaatgatgttgtcgagcgatatgtgataatatcaattgataattaggatctgcaacactaatccgagaatac--atatgaa----taggttg 98  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||  ||| | |    |||||||    
T  1711 ttggacacgaatgaagttgttgagcaatatgtgataatatcaattgataattagaatccgcaacactaatccgagtatacgtatacgtatacgtaggttg 1810  T
Q  99 atgaagtttaatcccaacataatcatttccctgttaactctc 140  Q
    |||||||||||||| | ||||| |||||||||||||||||||    
T  1811 atgaagtttaatcctagcataaccatttccctgttaactctc 1852  T

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Target: scaffold0291; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 1914 - 1975
Alignment:
Q  203 ctcagaacgatatgaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 264  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  1914 ctcagaacgatatagattgttgaacggcttagaatatcgcaccagtccttgtggagacgata 1975  T

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Target: scaffold0744 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 6979 - 6915
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6979 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 6915  T

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Target: scaffold0043 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 5233 - 5297
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5233 atatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactaca 5297  T

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Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 5010 - 5053
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  5010 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 5053  T

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Target: scaffold0060 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15165 - 15101
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15165 atatcgcactagtccctgaggagacgatataaatacttactattgtttaatgcaaaaatactaca 15101  T

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Target: scaffold0053 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 49685 - 49621
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  49685 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactaca 49621  T

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Target: scaffold0053; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 55666 - 55602
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  55666 atatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaacaatactaca 55602  T

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Target: scaffold0343 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 2638 - 2575
Alignment:
Q  237 tatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  2638 tatcgcactagtccctgaggagacgatagaaatacttactattgtttgatgcaaaaatactaca 2575  T

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Target: scaffold0173 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 24474 - 24538
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  24474 atatcgcactagtccctgaggagacgatataaatacttaatattgtttgatgctaaaatactaca 24538  T

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Target: scaffold0002 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 99908 - 99844
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||    
T  99908 atatcgcacaagtccctgagaagacgatacaaatacttactattgtttgatgcaaaaatactaca 99844  T

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Target: scaffold0513 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 11944 - 11880
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| |||||||| |||||||||| |||||||||| ||| ||||||||||||||||||||    
T  11944 atatcgcactagtccctgaggagacgatacaaatacttacaattatttgatgcaaaaatactaca 11880  T

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Target: scaffold0513; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 12150 - 12107
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  12150 tttggacacgaatggtgttgtcgagggatacgtgataatatcaa 12107  T

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Target: scaffold0510 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 2789 - 2846
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaa 293  Q
    ||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  2789 atatcgcactagtccctgaggagacgatacaaatacttagtattgtttgatgcaaaaa 2846  T

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Target: scaffold0510; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 9110 - 9174
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| ||||| || |||||||||| |||||||||| ||| ||||||||||||||||||||    
T  9110 atatcgcactagtccttgaggagacgatagaaatacttacaattatttgatgcaaaaatactaca 9174  T

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Target: scaffold0510; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 8886 - 8929
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  8886 tttggacacgaatggtgttgtcgagggatatgtgataatatcaa 8929  T

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Target: scaffold0936 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 3491 - 3555
Alignment:
Q  236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactaca 300  Q
    ||||||||| | || ||| ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  3491 atatcgcactaatctctgaggagacgatataactacttgctattgtttgatgcaaaaatactaca 3555  T

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Target: scaffold0936; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 3269 - 3312
Alignment:
Q  4 tttggacacgaatgatgttgtcgagcgatatgtgataatatcaa 47  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  3269 tttggacacgaatgatgttgtcgagggatacgtgataatatcaa 3312  T

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Target: scaffold0147 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7217 - 7259
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatat 44  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  7217 tcatttggacacgaatgatgttgtcgagtgat-tgtgataatat 7259  T

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Target: scaffold0859 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5023 - 4980
Alignment:
Q  1 tcatttggacacgaatgatgttgtcgagcgatatgtgataatatc 45  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  5023 tcatttggacacgaatgatattgtcgagtgat-tgtgataatatc 4980  T

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