View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6981_high_18 (Length: 259)

Name: NF6981_high_18
Description: NF6981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6981_high_18
NF6981_high_18
[»] chr1 (63 HSPs)
chr1 (1-169)||(39150327-39150495)
chr1 (1-169)||(17919463-17919631)
chr1 (1-169)||(313759-313927)
chr1 (1-169)||(44918034-44918202)
chr1 (1-174)||(41624839-41625012)
chr1 (1-169)||(6754481-6754649)
chr1 (1-169)||(30171888-30172057)
chr1 (1-169)||(30187429-30187598)
chr1 (38-169)||(30288864-30288995)
chr1 (28-158)||(39930812-39930942)
chr1 (1-157)||(8062214-8062370)
chr1 (1-137)||(32716195-32716331)
chr1 (34-169)||(6569985-6570120)
chr1 (1-169)||(13321885-13322054)
chr1 (39-141)||(52833500-52833602)
chr1 (1-169)||(1502720-1502888)
chr1 (1-169)||(34801977-34802145)
chr1 (17-171)||(51920429-51920584)
chr1 (13-169)||(30362995-30363152)
chr1 (8-169)||(36490795-36490957)
chr1 (1-169)||(23576414-23576582)
chr1 (1-70)||(51382381-51382450)
chr1 (2-169)||(22167345-22167513)
chr1 (1-134)||(21854152-21854285)
chr1 (1-169)||(38812749-38812918)
chr1 (1-171)||(23591707-23591878)
chr1 (1-169)||(6180195-6180364)
chr1 (3-171)||(7519994-7520164)
chr1 (1-169)||(35512734-35512903)
chr1 (1-97)||(39627643-39627740)
chr1 (1-108)||(7824919-7825027)
chr1 (1-73)||(22331632-22331704)
chr1 (82-169)||(3096300-3096387)
chr1 (39-168)||(35438762-35438892)
chr1 (1-169)||(6307512-6307680)
chr1 (31-138)||(31100964-31101071)
chr1 (2-77)||(11744921-11744996)
chr1 (1-171)||(25532218-25532389)
chr1 (33-170)||(5057043-5057181)
chr1 (39-168)||(9516628-9516758)
chr1 (84-169)||(10896446-10896531)
chr1 (3-175)||(25465170-25465342)
chr1 (44-97)||(43671742-43671795)
chr1 (3-71)||(3121130-3121197)
chr1 (84-168)||(12947555-12947639)
chr1 (8-135)||(25956665-25956793)
chr1 (1-77)||(34050376-34050452)
chr1 (1-77)||(43317499-43317574)
chr1 (19-77)||(19277815-19277873)
chr1 (3-77)||(40799351-40799425)
chr1 (3-77)||(47355471-47355544)
chr1 (1-93)||(23808444-23808536)
chr1 (1-73)||(3168166-3168237)
chr1 (1-77)||(23378598-23378673)
chr1 (1-77)||(32543143-32543219)
chr1 (45-108)||(33048173-33048237)
chr1 (1-57)||(36578341-36578397)
chr1 (3-77)||(30109099-30109173)
chr1 (1-138)||(38539096-38539231)
chr1 (1-138)||(38561314-38561449)
chr1 (46-175)||(39310780-39310910)
chr1 (115-168)||(5875216-5875269)
chr1 (29-77)||(2222328-2222375)
[»] chr7 (54 HSPs)
chr7 (1-169)||(19889350-19889518)
chr7 (1-169)||(36548460-36548628)
chr7 (1-169)||(5909282-5909450)
chr7 (1-169)||(39757110-39757278)
chr7 (1-169)||(9331971-9332139)
chr7 (1-169)||(3561878-3562046)
chr7 (1-169)||(12085931-12086099)
chr7 (1-135)||(47120228-47120362)
chr7 (1-169)||(7170012-7170180)
chr7 (25-171)||(384429-384574)
chr7 (1-166)||(24462958-24463123)
chr7 (1-169)||(23982755-23982924)
chr7 (1-95)||(24250323-24250417)
chr7 (1-169)||(47457461-47457630)
chr7 (36-167)||(18102232-18102364)
chr7 (1-172)||(45501468-45501640)
chr7 (1-170)||(25709398-25709568)
chr7 (1-169)||(33342998-33343166)
chr7 (1-122)||(19868123-19868245)
chr7 (1-169)||(46290020-46290188)
chr7 (1-183)||(4969782-4969965)
chr7 (1-141)||(39869132-39869271)
chr7 (2-96)||(24699146-24699240)
chr7 (1-167)||(42750298-42750459)
chr7 (1-169)||(32117824-32117992)
chr7 (1-169)||(34270275-34270439)
chr7 (39-168)||(7899487-7899617)
chr7 (63-167)||(8170593-8170697)
chr7 (1-176)||(29692533-29692709)
chr7 (2-77)||(12650831-12650906)
chr7 (12-169)||(8091312-8091470)
chr7 (82-167)||(41331458-41331543)
chr7 (3-138)||(12624649-12624783)
chr7 (1-171)||(26300582-26300751)
chr7 (1-70)||(39475857-39475927)
chr7 (3-77)||(44806945-44807019)
chr7 (1-169)||(7040252-7040420)
chr7 (110-171)||(24250617-24250678)
chr7 (12-77)||(31066829-31066894)
chr7 (46-138)||(47707915-47708008)
chr7 (1-77)||(38554247-38554323)
chr7 (110-170)||(22334020-22334080)
chr7 (3-97)||(27300438-27300534)
chr7 (44-97)||(8420905-8420959)
chr7 (44-97)||(11680090-11680144)
chr7 (1-93)||(24639552-24639644)
chr7 (114-167)||(26037216-26037269)
chr7 (114-171)||(29398132-29398189)
chr7 (29-97)||(47200951-47201019)
chr7 (41-77)||(3530207-3530242)
chr7 (1-49)||(4161891-4161939)
chr7 (61-168)||(5833424-5833532)
chr7 (45-97)||(16800557-16800609)
chr7 (1-57)||(29398227-29398283)
[»] chr2 (57 HSPs)
chr2 (1-169)||(27665044-27665212)
chr2 (1-169)||(16126559-16126727)
chr2 (5-167)||(14377438-14377600)
chr2 (1-169)||(12016676-12016844)
chr2 (1-172)||(16919151-16919322)
chr2 (1-167)||(19228435-19228601)
chr2 (1-138)||(26229885-26230021)
chr2 (1-138)||(22705464-22705601)
chr2 (3-138)||(13351242-13351378)
chr2 (4-168)||(16123291-16123455)
chr2 (1-167)||(15411624-15411791)
chr2 (34-168)||(8770887-8771021)
chr2 (38-169)||(4821323-4821454)
chr2 (1-138)||(39904079-39904216)
chr2 (1-124)||(10690792-10690915)
chr2 (172-243)||(38185881-38185953)
chr2 (1-169)||(9747326-9747495)
chr2 (1-169)||(5583558-5583726)
chr2 (1-172)||(7720124-7720296)
chr2 (44-171)||(15231883-15232011)
chr2 (1-172)||(20566014-20566186)
chr2 (1-169)||(43806369-43806538)
chr2 (1-172)||(23932574-23932746)
chr2 (29-167)||(2060044-2060183)
chr2 (1-138)||(36612762-36612900)
chr2 (1-138)||(36620613-36620751)
chr2 (3-77)||(43388859-43388933)
chr2 (1-174)||(7757781-7757954)
chr2 (28-169)||(24729577-24729719)
chr2 (1-169)||(9450266-9450435)
chr2 (9-97)||(22162149-22162237)
chr2 (1-169)||(25998002-25998171)
chr2 (1-95)||(12438723-12438816)
chr2 (9-175)||(34213943-34214112)
chr2 (13-171)||(16493530-16493691)
chr2 (9-169)||(38248420-38248579)
chr2 (45-171)||(5853461-5853588)
chr2 (1-171)||(45062207-45062378)
chr2 (6-76)||(40562171-40562241)
chr2 (9-171)||(41492131-41492292)
chr2 (9-97)||(2051631-2051720)
chr2 (1-168)||(12919351-12919520)
chr2 (29-181)||(29142111-29142264)
chr2 (45-171)||(22704590-22704717)
chr2 (84-167)||(26003348-26003431)
chr2 (1-99)||(34817553-34817651)
chr2 (72-169)||(4576326-4576423)
chr2 (1-69)||(4579889-4579957)
chr2 (125-177)||(6109523-6109575)
chr2 (9-138)||(37471771-37471903)
chr2 (115-169)||(8065247-8065301)
chr2 (36-93)||(15749278-15749336)
chr2 (2-48)||(21470831-21470877)
chr2 (1-71)||(40503080-40503150)
chr2 (9-74)||(14285371-14285435)
chr2 (1-58)||(26003603-26003660)
chr2 (45-77)||(38327861-38327893)
[»] chr3 (61 HSPs)
chr3 (1-165)||(11610924-11611088)
chr3 (1-171)||(20938066-20938237)
chr3 (1-169)||(13495303-13495472)
chr3 (19-169)||(16875025-16875175)
chr3 (1-169)||(3863339-3863507)
chr3 (1-169)||(38389456-38389625)
chr3 (1-138)||(50364200-50364337)
chr3 (1-111)||(51339242-51339352)
chr3 (1-131)||(54621256-54621386)
chr3 (3-173)||(46492339-46492510)
chr3 (1-169)||(32553376-32553544)
chr3 (17-168)||(40497073-40497224)
chr3 (38-169)||(29686367-29686498)
chr3 (1-169)||(2571278-2571446)
chr3 (2-169)||(36426409-36426579)
chr3 (1-175)||(51618059-51618231)
chr3 (1-178)||(50204412-50204590)
chr3 (1-169)||(10307776-10307944)
chr3 (1-168)||(23638050-23638218)
chr3 (1-168)||(54527707-54527875)
chr3 (1-71)||(12515573-12515642)
chr3 (3-77)||(46845533-46845607)
chr3 (29-138)||(38786355-38786463)
chr3 (38-170)||(24978693-24978825)
chr3 (1-77)||(37444156-37444231)
chr3 (1-168)||(42180061-42180229)
chr3 (36-166)||(23803049-23803180)
chr3 (36-170)||(38785924-38786059)
chr3 (1-77)||(2379165-2379238)
chr3 (8-131)||(35094972-35095092)
chr3 (1-77)||(24569330-24569406)
chr3 (110-169)||(11611095-11611154)
chr3 (1-168)||(51567821-51567987)
chr3 (12-77)||(9710964-9711029)
chr3 (1-168)||(37055367-37055535)
chr3 (92-168)||(41151734-41151810)
chr3 (110-169)||(23523065-23523124)
chr3 (13-168)||(31318660-31318818)
chr3 (45-171)||(33474471-33474598)
chr3 (1-131)||(37332124-37332253)
chr3 (1-78)||(30214102-30214178)
chr3 (1-77)||(47386931-47387008)
chr3 (9-97)||(53794781-53794870)
chr3 (1-73)||(24086993-24087065)
chr3 (9-138)||(53718323-53718454)
chr3 (2-58)||(54027043-54027098)
chr3 (3-93)||(13879883-13879973)
chr3 (83-169)||(49396472-49396558)
chr3 (1-97)||(1569262-1569359)
chr3 (1-77)||(8497513-8497592)
chr3 (44-104)||(22103031-22103090)
chr3 (3-168)||(27549549-27549721)
chr3 (1-57)||(43750061-43750117)
chr3 (49-171)||(35414807-35414930)
chr3 (10-49)||(38989455-38989494)
chr3 (115-170)||(40930175-40930230)
chr3 (104-178)||(36812371-36812444)
chr3 (8-77)||(49396367-49396436)
chr3 (1-73)||(15863002-15863074)
chr3 (48-104)||(22177972-22178027)
chr3 (1-57)||(35415134-35415190)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-168)||(5700-5868)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-169)||(52779-52947)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-169)||(145687-145855)
[»] chr8 (71 HSPs)
chr8 (1-169)||(10129113-10129281)
chr8 (1-169)||(39701803-39701971)
chr8 (1-169)||(7140459-7140627)
chr8 (1-168)||(13327942-13328109)
chr8 (1-141)||(9743871-9744011)
chr8 (1-169)||(19343836-19344005)
chr8 (1-174)||(1203611-1203784)
chr8 (1-169)||(14816126-14816294)
chr8 (1-169)||(14829446-14829614)
chr8 (1-169)||(35678275-35678443)
chr8 (1-155)||(40210835-40210989)
chr8 (17-138)||(8140593-8140714)
chr8 (1-169)||(9801678-9801846)
chr8 (1-169)||(26682077-26682246)
chr8 (1-141)||(38527830-38527974)
chr8 (1-169)||(31812122-31812291)
chr8 (32-175)||(18567410-18567553)
chr8 (1-169)||(26834570-26834739)
chr8 (1-168)||(4080395-4080562)
chr8 (1-169)||(3306055-3306223)
chr8 (1-168)||(4102851-4103018)
chr8 (29-169)||(39024857-39024997)
chr8 (1-168)||(4084544-4084711)
chr8 (1-169)||(2161397-2161565)
chr8 (1-174)||(8284563-8284738)
chr8 (4-99)||(39703466-39703561)
chr8 (1-169)||(12131992-12132161)
chr8 (1-169)||(38843713-38843882)
chr8 (19-167)||(44091346-44091494)
chr8 (19-99)||(45516316-45516395)
chr8 (1-162)||(36967077-36967239)
chr8 (1-169)||(12189588-12189757)
chr8 (1-169)||(12434016-12434185)
chr8 (1-169)||(26363990-26364158)
chr8 (3-169)||(9580109-9580276)
chr8 (1-171)||(38212942-38213114)
chr8 (37-169)||(29642648-29642781)
chr8 (1-93)||(45005979-45006072)
chr8 (1-167)||(20514641-20514809)
chr8 (1-77)||(33514593-33514669)
chr8 (1-169)||(28014858-28015025)
chr8 (73-167)||(45519564-45519658)
chr8 (1-58)||(7750677-7750734)
chr8 (12-77)||(37264521-37264586)
chr8 (16-169)||(5573312-5573464)
chr8 (19-173)||(16445732-16445886)
chr8 (1-97)||(34249686-34249784)
chr8 (1-131)||(34869560-34869691)
chr8 (82-141)||(35740957-35741016)
chr8 (45-171)||(40225985-40226112)
chr8 (1-97)||(1844632-1844730)
chr8 (1-169)||(27874681-27874848)
chr8 (87-169)||(31451420-31451502)
chr8 (1-169)||(6818026-6818195)
chr8 (1-73)||(12346015-12346087)
chr8 (1-168)||(32186195-32186363)
chr8 (10-73)||(6850674-6850737)
chr8 (114-169)||(14961663-14961718)
chr8 (29-97)||(10974626-10974695)
chr8 (1-77)||(13496824-13496901)
chr8 (29-111)||(39430522-39430606)
chr8 (1-76)||(35745982-35746057)
chr8 (1-70)||(40716284-40716353)
chr8 (29-111)||(32195874-32195954)
chr8 (1-93)||(33430189-33430282)
chr8 (106-167)||(45518067-45518128)
chr8 (44-167)||(7489654-7489778)
chr8 (1-73)||(11923024-11923096)
chr8 (121-169)||(13496709-13496757)
chr8 (29-77)||(15868053-15868101)
chr8 (101-141)||(29912132-29912172)
[»] chr5 (41 HSPs)
chr5 (1-169)||(2795533-2795701)
chr5 (1-172)||(31365947-31366120)
chr5 (1-168)||(15190882-15191050)
chr5 (1-168)||(34578021-34578188)
chr5 (8-169)||(4047429-4047590)
chr5 (1-138)||(30328358-30328495)
chr5 (1-177)||(8103572-8103748)
chr5 (1-169)||(11636741-11636909)
chr5 (4-171)||(11375972-11376140)
chr5 (1-171)||(12641991-12642161)
chr5 (3-168)||(28629890-28630056)
chr5 (1-138)||(9184217-9184354)
chr5 (33-168)||(41350244-41350379)
chr5 (1-169)||(18841705-18841874)
chr5 (1-169)||(30839791-30839959)
chr5 (1-169)||(36597589-36597757)
chr5 (1-169)||(3398229-3398398)
chr5 (1-134)||(24329670-24329803)
chr5 (1-96)||(5958196-5958292)
chr5 (29-168)||(16174623-16174762)
chr5 (1-166)||(40512961-40513126)
chr5 (65-168)||(14466495-14466598)
chr5 (28-167)||(31567493-31567633)
chr5 (19-169)||(6863584-6863734)
chr5 (33-138)||(18150454-18150561)
chr5 (106-167)||(30893744-30893805)
chr5 (1-171)||(32019982-32020153)
chr5 (1-57)||(10665077-10665133)
chr5 (1-97)||(33072686-33072785)
chr5 (3-93)||(3737952-3738042)
chr5 (1-70)||(11360195-11360265)
chr5 (1-43)||(11692758-11692800)
chr5 (32-108)||(38994136-38994213)
chr5 (1-73)||(26376666-26376738)
chr5 (52-138)||(26265075-26265162)
chr5 (32-91)||(29538768-29538827)
chr5 (1-71)||(11250056-11250125)
chr5 (40-78)||(15820274-15820312)
chr5 (1-97)||(35469562-35469660)
chr5 (1-58)||(24014799-24014856)
chr5 (1-57)||(32282819-32282875)
[»] chr4 (65 HSPs)
chr4 (1-168)||(23553579-23553747)
chr4 (5-169)||(7349702-7349866)
chr4 (3-169)||(29190816-29190982)
chr4 (6-169)||(10813494-10813658)
chr4 (32-169)||(4329635-4329772)
chr4 (19-172)||(53961350-53961503)
chr4 (29-169)||(41415557-41415697)
chr4 (1-169)||(35999947-36000108)
chr4 (1-168)||(16667385-16667553)
chr4 (7-175)||(27362406-27362575)
chr4 (28-168)||(48910803-48910943)
chr4 (1-168)||(10389269-10389436)
chr4 (1-169)||(54495637-54495806)
chr4 (61-169)||(23051382-23051490)
chr4 (1-172)||(23545485-23545657)
chr4 (4-169)||(27019272-27019438)
chr4 (1-169)||(19468203-19468372)
chr4 (1-169)||(34941287-34941456)
chr4 (4-171)||(47326890-47327058)
chr4 (4-171)||(47341686-47341854)
chr4 (3-169)||(49181083-49181250)
chr4 (3-168)||(52391309-52391475)
chr4 (1-169)||(8736811-8736979)
chr4 (1-169)||(17409833-17410002)
chr4 (1-169)||(19450900-19451069)
chr4 (1-169)||(50352312-50352480)
chr4 (1-92)||(49228366-49228457)
chr4 (1-169)||(9759142-9759310)
chr4 (5-169)||(39876844-39877008)
chr4 (1-166)||(24684845-24685012)
chr4 (1-169)||(40049568-40049736)
chr4 (4-99)||(49650223-49650318)
chr4 (1-71)||(10658543-10658612)
chr4 (1-71)||(10872688-10872757)
chr4 (1-97)||(2096880-2096977)
chr4 (1-169)||(33632203-33632371)
chr4 (1-111)||(6875510-6875621)
chr4 (91-169)||(49228754-49228832)
chr4 (4-169)||(27756574-27756739)
chr4 (45-171)||(4779434-4779561)
chr4 (3-169)||(51691353-51691519)
chr4 (36-169)||(16069207-16069341)
chr4 (29-169)||(25843328-25843472)
chr4 (1-134)||(39539473-39539607)
chr4 (3-57)||(40681960-40682014)
chr4 (1-39)||(48910965-48911003)
chr4 (48-168)||(55813920-55814041)
chr4 (1-73)||(3085361-3085433)
chr4 (12-111)||(24297392-24297492)
chr4 (1-77)||(24993549-24993625)
chr4 (1-77)||(49332342-49332418)
chr4 (29-167)||(37432868-37433007)
chr4 (12-77)||(13009848-13009913)
chr4 (29-78)||(23438193-23438242)
chr4 (29-97)||(37784932-37785001)
chr4 (1-171)||(19838689-19838858)
chr4 (44-171)||(36971326-36971454)
chr4 (29-120)||(38222323-38222415)
chr4 (114-169)||(18882267-18882322)
chr4 (6-77)||(42480015-42480086)
chr4 (44-97)||(35645073-35645127)
chr4 (2-60)||(49250444-49250502)
chr4 (39-171)||(1378066-1378197)
chr4 (1-57)||(3728258-3728315)
chr4 (1-42)||(36968297-36968338)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-169)||(13095-13263)
[»] chr6 (39 HSPs)
chr6 (1-172)||(10887038-10887210)
chr6 (13-168)||(31069583-31069738)
chr6 (1-169)||(2830681-2830849)
chr6 (1-137)||(5362925-5363061)
chr6 (11-138)||(22974604-22974731)
chr6 (11-138)||(23813670-23813797)
chr6 (1-138)||(1017809-1017947)
chr6 (1-169)||(18332688-18332857)
chr6 (1-168)||(6016865-6017033)
chr6 (1-168)||(8977467-8977635)
chr6 (5-169)||(31568126-31568287)
chr6 (1-174)||(28943764-28943937)
chr6 (1-169)||(14228126-14228294)
chr6 (1-169)||(34692363-34692532)
chr6 (1-138)||(30623335-30623473)
chr6 (1-169)||(17552587-17552755)
chr6 (1-77)||(26602523-26602599)
chr6 (35-169)||(17596385-17596519)
chr6 (3-169)||(27819627-27819796)
chr6 (4-169)||(31169763-31169929)
chr6 (1-71)||(33017734-33017803)
chr6 (1-58)||(12454075-12454132)
chr6 (32-167)||(17141315-17141451)
chr6 (13-170)||(30591162-30591320)
chr6 (17-94)||(3850577-3850654)
chr6 (1-169)||(29863302-29863471)
chr6 (1-49)||(17596322-17596370)
chr6 (7-56)||(2086949-2086998)
chr6 (1-168)||(31790917-31791085)
chr6 (1-89)||(32615540-32615631)
chr6 (110-169)||(3853062-3853121)
chr6 (3-171)||(4371850-4372019)
chr6 (1-73)||(24979246-24979318)
chr6 (9-77)||(31039721-31039789)
chr6 (8-122)||(34300379-34300493)
chr6 (1-71)||(1814881-1814950)
chr6 (108-141)||(26602480-26602513)
chr6 (32-96)||(29730318-29730383)
chr6 (83-139)||(16540696-16540752)
[»] scaffold0111 (2 HSPs)
scaffold0111 (1-169)||(37114-37283)
scaffold0111 (114-179)||(41105-41170)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-169)||(182080-182220)
[»] scaffold0009 (2 HSPs)
scaffold0009 (7-168)||(43479-43641)
scaffold0009 (29-97)||(191386-191454)
[»] scaffold0155 (1 HSPs)
scaffold0155 (11-169)||(3413-3572)
[»] scaffold0618 (1 HSPs)
scaffold0618 (19-167)||(8416-8564)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-171)||(94016-94187)
[»] scaffold0305 (1 HSPs)
scaffold0305 (32-171)||(17994-18134)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-77)||(22469-22549)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-93)||(13734-13827)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-169)||(16535-16703)
[»] scaffold0136 (1 HSPs)
scaffold0136 (83-167)||(1445-1529)
[»] scaffold0631 (1 HSPs)
scaffold0631 (1-49)||(451-499)
[»] scaffold0128 (1 HSPs)
scaffold0128 (16-76)||(44373-44431)
[»] scaffold0074 (1 HSPs)
scaffold0074 (118-170)||(45496-45548)


Alignment Details
Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39150495 - 39150327
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  39150495 acatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaac 39150396  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  39150395 acaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 39150327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17919463 - 17919631
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  17919463 acatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaac 17919562  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||  |||||||| ||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  17919563 acaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcacatgatagaaaaac 17919631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 313759 - 313927
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||     
T  313759 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 313858  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  313859 acaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 44918034 - 44918202
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||     
T  44918034 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaac 44918133  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | || ||  || | ||| ||||||||||||| |||||| ||   | |||||||||||||||||||||||    
T  44918134 ataagttccaaattaaagttactactttaaatttcttaacatgtgtaaatttgcacatgatagaaaaac 44918202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 41624839 - 41625012
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||      
T  41624839 acatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatg 41624937  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 174  Q
     |||| ||  |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  41624938 cacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcacatgatagaaaaaccctat 41625012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6754481 - 6754649
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||      
T  6754481 acatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatg 6754579  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  6754580 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 6754649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30171888 - 30172057
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||      
T  30171888 acatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatg 30171987  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  30171988 cacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 30172057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30187429 - 30187598
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||      
T  30187429 acatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatg 30187528  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  30187529 cacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 30187598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 30288995 - 30288864
Alignment:
Q  38 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||| ||  |||| |||||||||||||||||||||||    
T  30288995 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttctt 30288896  T
Q  138 atcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||   | |||||||||||||||||||||||    
T  30288895 aacatgtgtaaatttgcacatgatagaaaaac 30288864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 39930942 - 39930812
Alignment:
Q  28 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||  | ||||| ||||||||||||||||| ||| |||| ||| |||||||||    
T  39930942 taactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaactacatatataatataaaaaatacaagtttcaagttaaagttactactt 39930843  T
Q  128 taaacttcttatcacaagcaaatttgcacat 158  Q
    ||||||||||||||   ||||||||||||||    
T  39930842 taaacttcttatcatgtgcaaatttgcacat 39930812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 8062214 - 8062370
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||  |  |||||||||||||||||     
T  8062214 acatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaactatatatttaatataaaaaac 8062313  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcaca 157  Q
    | |||||| || | ||| |||||||||||||||| ||| ||   |||||||||||||    
T  8062314 ataaatttcaaattaaagttactactttaaactttttaacatgtgcaaatttgcaca 8062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32716331 - 32716195
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||| | ||||| ||||  |||||||| |||||||||| |||||| ||| ||||||||||||||||||     
T  32716331 acatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaatgttacatatttaatataaaaaac 32716232  T
Q  101 acaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||| ||   | |||||||||||||||||||||||||    
T  32716231 acaagttcctaatcaaaattactactttaaacttctt 32716195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 6570120 - 6569985
Alignment:
Q  34 aaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaact 133  Q
    |||||| ||| |||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||| ||  |||| ||| |||||||||||||||    
T  6570120 aaagtactaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaact 6570021  T
Q  134 tcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||   |||||||||||||||||||||||||    
T  6570020 tcttaacatgtgcaaatttgcacatgatagaaaaac 6569985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13321885 - 13322054
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||| ||||||||| | |||||| |||||||| ||||| ||||||| |||||||||||| || |||||||  ||||||||||| |||      
T  13321885 acatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttttatatttaatattaaatg 13321984  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||  ||  ||||||| ||| ||||||||||||| || | |||||||||||||||||||||||||    
T  13321985 tacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatgatagaaaaac 13322054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 52833602 - 52833500
Alignment:
Q  39 agtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||||||||| ||||||||| ||||||||||||||||||| | |||||||| ||||||||  |||||||| ||||||||||||||| |||||||||||||    
T  52833602 agtaatttttcattgaaaacaaacaattatttattaaaagctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttctta 52833503  T
Q  139 tca 141  Q
    |||    
T  52833502 tca 52833500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1502888 - 1502720
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||| |  |||||||  |||||||||| ||||      
T  1502888 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaa-caacaattatttaacaaaaagttatatatttaatacaaaatg 1502790  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||||||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  1502789 ttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 1502720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34801977 - 34802145
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||  | |||||||||||| |||      
T  34801977 acatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatg 34802076  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     || || ||  || ||||||||| | ||||||||||||| ||   |||||||||||||||||||||||||    
T  34802077 cac-aagttccagacaaaattaccattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 34802145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 51920584 - 51920429
Alignment:
Q  17 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtca 115  Q
    ||||||||| | || ||| |||||||||||||| ||||||| ||||||||||||||| |||||||  ||||||||||| ||| |||||||||||||   |    
T  51920584 acatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatatacaaattttaatata 51920485  T
Q  116 aaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    ||||| ||| |||||| || ||| ||   |||||||||||||||||||||||||||    
T  51920484 aaatttctattttaaatttattaacatgtgcaaatttgcacatgatagaaaaactc 51920429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 30363152 - 30362995
Alignment:
Q  13 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaa 111  Q
    ||||||||||||||   ||||||| |||||| ||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||   |||| ||  ||    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 30363053  T
Q  112 gtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||| |||||| |||||| || ||||||   |||||||||||||||||||||||||    
T  30363052 gtcaaagttactattttaaatttgttatcatgtgcaaatttgcacatgatagaaaaac 30362995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 36490795 - 36490957
Alignment:
Q  8 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaat 106  Q
    ||||||||||||||||||   || |||||||||||| ||||||||||||| ||||||||||||||| |||||||  ||||| |||| ||||  ||||| |    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagt 36490894  T
Q  107 tttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |  ||  |||| |||||| ||||||||||||| ||   |||||||||| ||||||||||||||    
T  36490895 tccaatgcaaagttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaac 36490957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23576582 - 23576414
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||| ||||||||||||||||||||| ||||||||||||  || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  23576582 acatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 23576484  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||| ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  23576483 ttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 23576414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51382381 - 51382450
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt 70  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  51382381 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 22167345 - 22167513
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaat 100  Q
    ||||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||  |    
T  22167345 catgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgt 22167444  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  ||  |||| || ||| ||||||||||||||||   ||||||||||||||||||| |||||    
T  22167445 acaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgataggaaaac 22167513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21854285 - 21854152
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||| ||||| ||||||| ||||||| | | ||||||||||||||      
T  21854285 acatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatg 21854187  T
Q  100 tacaaattttaagtcaaaattactactttaaactt 134  Q
    ||||| ||  |||||||| |||| |||||||||||    
T  21854186 tacaagttccaagtcaaagttaccactttaaactt 21854152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 38812749 - 38812918
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||| ||||||||| | |||||| |||||||| ||||| ||  ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  38812749 acatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagttttatatttaatattaaatg 38812848  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||| ||   |||||| ||| ||| ||||||||| ||   |||||||||||||||||||||||||    
T  38812849 tacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38812918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23591707 - 23591878
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||||||||||||   |||||||| |||||| ||||||||||||| ||| ||||||||||| |||||||  |||||||||| ||||      
T  23591707 acatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaatg 23591806  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    ||||| ||  ||  |||| ||  || || ||| |||||| ||   |||||||||||||||||||||||||||    
T  23591807 tacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaactc 23591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6180195 - 6180364
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| |||   | ||||||||||| |||||||  ||||||||||| |||      
T  6180195 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagttttatatttaatattaaatg 6180294  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||   |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  6180295 tacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 6180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 7520164 - 7519994
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaata 101  Q
    |||||||||||||||||||||||   ||||||||||||||| |||||||| ||||  || | ||||||||||||| |||  ||||| |||| ||||  ||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgttatatattaaatacaaaatgta 7520065  T
Q  102 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaa-tttgcacatgatagaaaaactc 171  Q
    ||||||| ||  |||| ||  || ||||||||||||| ||   | ||| ||||||||||||||||||||||    
T  7520064 caaatttcaatgcaaagttgttattttaaacttcttaacatgtgaaaattttgcacatgatagaaaaactc 7519994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35512734 - 35512903
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||| ||||||| | |||||| |||||||| ||||| ||| ||| ||||| |||| |||| |||||||  ||||||||||| |||      
T  35512734 acatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagttttatatttaatattaaatg 35512833  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||   |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  35512834 tgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 35512903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39627740 - 39627643
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    |||||||||||||| |||||||||||  |||||||| ||| || |||| |||||||| ||||||| | ||||| ||||||| ||||||||||||||||    
T  39627740 acatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaa 39627643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7825027 - 7824919
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | ||||||||||||| |||||||  ||||||||||| |||      
T  7825027 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagttttatatttaatattaaatg 7824928  T
Q  100 tacaaattt 108  Q
    |||||||||    
T  7824927 tacaaattt 7824919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22331632 - 22331704
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| |||||||||||||| ||| |||| |||||||| ||||| ||||||| |||||||||||||||    
T  22331632 acatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattatttatt 22331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 3096300 - 3096387
Alignment:
Q  82 catatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||||||||||||| | || |||||||| ||||||| ||||||||| || ||||||   |||||||||||||| ||||||||||    
T  3096300 catatttaatataaaaaacataagttttaagttaaaattattactttaaattttttatcatgtgcaaatttgcacataatagaaaaac 3096387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 35438762 - 35438892
Alignment:
Q  39 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    ||||| |||| |||||||| || ||||| |||||||||| |||  ||||||||||||||| | ||||||| ||||  ||| |||| | |||||| |||||    
T  35438762 agtaacttttaattgaaaaacaccaattgtttattaaaaagttatatatttaatataaaatacacaaattataagataaacttaccattttaaatttctt 35438861  T
Q  138 atcacaagcaaatttgcacatgatagaaaaa 168  Q
    | ||   ||||||||||||||||||||||||    
T  35438862 aacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6307512 - 6307680
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatat-ttaatataaaaaa 99  Q
    |||||||||| |||||| |||||||  ||||||||||  | || | ||||||| ||| ||||||||||||||||||| ||  |||| |||||| |||| |    
T  6307512 acatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatt-tatatattaatagaaaata 6307610  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  || |||||  || |||||||||||||||| ||   |||||||||||||||||| ||||||    
T  6307611 cacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaac 6307680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 31101071 - 31100964
Alignment:
Q  31 ctaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactacttta 129  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||| |   ||||||||||||||||   |||| |||||||||||| |||| ||||||    
T  31101071 ctaaaagtagtaattttc-attgaaaaacaacacttatttattaaaaagcaacatatttaatataaaatgcacaagttttaagtcaaagttaccacttta 31100973  T
Q  130 aacttctta 138  Q
    || ||||||    
T  31100972 aatttctta 31100964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 11744996 - 11744921
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||| |||||||||||||   || ||||||||  || ||||||||||||| |||||||||||||||||||    
T  11744996 catgtgcaatgttgcacatgttaaagaaattaaaagtataaactttttattgaaaaacaacaattatttattaaaa 11744921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25532218 - 25532389
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||| ||| || ||||||||||| |||||||| |||| ||| ||||| |||  || ||||| | | ||||| |||||||  ||||||||||| |||      
T  25532218 acatgttcaacatcgcacatgttaaaataactaacagtaataacttttttttgggaaacaacactaaattatttaaaagttttatatttaatattaaatg 25532317  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    || |||||||||  ||||||| ||  ||||||||| ||| ||   ||||||||||| |||||||||||||||    
T  25532318 tataaattttaatacaaaatttcttttttaaactttttaacatgcgcaaatttgcatatgatagaaaaactc 25532389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 5057043 - 5057181
Alignment:
Q  33 aaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaa 131  Q
    ||||||||||||| |||||| |||| ||| | | ||||||||||| | |  |||||||||||||||  ||||| ||| |||||||| |||| ||||||||    
T  5057043 aaaagtagtaattatttatttaaaaacaatattaatttattaaaaagatatatatttaatataaaatgtacaagtttcaagtcaaagttaccactttaaa 5057142  T
Q  132 cttcttatcacaagcaaatttgcacatgatagaaaaact 170  Q
    ||| | | ||   ||||||||||| || |||||||||||    
T  5057143 cttttgaacatttgcaaatttgcatataatagaaaaact 5057181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 9516628 - 9516758
Alignment:
Q  39 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    ||||| |||| |||||||| || |||||||||||||||| |||  ||||||||||||||| | |||| || ||||  ||| |||| | |||||| |||||    
T  9516628 agtaacttttcattgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttctt 9516727  T
Q  138 atcacaagcaaatttgcacatgatagaaaaa 168  Q
    | ||   |||||||| |||||||||||||||    
T  9516728 aacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 10896446 - 10896531
Alignment:
Q  84 tatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||||||||||| |||| ||  |||| ||| |||||||||||||||||||| ||   |||| ||| ||||||||||||||||    
T  10896446 tatttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaacatgtgcaattttacacatgatagaaaaac 10896531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 25465170 - 25465342
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaaata 101  Q
    |||||||||||||||||||||||  | ||||||||||| ||  ||||||||| || ||||||||||||||  |||||||  ||||||   || |||   |    
T  25465170 atgtgcaatattgcacatgttaaagtcactaaaagtagcaa-cttttattgagaaacaacaattatttatcaaaaagttaaatattttccattaaatgca 25465268  T
Q  102 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 175  Q
    ||| ||  ||  |||| |||||| ||| ||||||||| ||   ||||||||||||||||||||||||| |||||    
T  25465269 caagttccaatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 25465342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 43671742 - 43671795
Alignment:
Q  44 ttttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 97  Q
    ||||||||| |||| ||||||||||||||||||||||  |||||||||||||||    
T  43671742 ttttttatttaaaatcaacaattatttattaaaagttatatatttaatataaaa 43671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 3121130 - 3121197
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||| || |||||||| ||| ||||||||| || ||||||||| |||||||||||||||||    
T  3121130 atgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattattta 3121197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 12947639 - 12947555
Alignment:
Q  84 tatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||||||||||||   |||| |||||||||||| |||||| ||||||||||||| || | | ||||| |||||||||| |||||    
T  12947639 tatttaatataaaatgcacaagttttaagtcaaagttactaatttaaacttcttaccatatgtaaattcgcacatgataaaaaaa 12947555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 25956665 - 25956793
Alignment:
Q  8 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaat 106  Q
    ||||||||||||| |||| | |||||| | || ||| ||||| ||||||| ||||||||||||| |||||||||  ||||||||||| |||  || ||||    
T  25956665 caatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagttttatatttaatattaaatgtataaat 25956764  T
Q  107 tttaagtcaaaattactactttaaacttc 135  Q
    || |   ||||||| ||| ||||||||||    
T  25956765 ttcagtacaaaatttctattttaaacttc 25956793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34050452 - 34050376
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||||||||||   ||| |||||||  || || |||||||||| |||||||||||||| ||||    
T  34050452 acatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaa 34050376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43317499 - 43317574
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||| |||||||||   ||||||||||||||| | ||| ||||||| ||||||| |||||||||||    
T  43317499 acatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaa-caacaatcatttattaaaa 43317574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 19277815 - 19277873
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||| | ||| || |||||||| ||||||||||||| |||||||||||||||||||    
T  19277815 atgttaaaacaacaaagagtagtaagtttttattgaaaaacaacaattatttattaaaa 19277873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 40799425 - 40799351
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||||||||||    |||||||||||  || |||||||||||||  || |||||||||||||||    
T  40799425 atgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaaaataaaaattatttattaaaa 40799351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 47355544 - 47355471
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||||||||   |||||||||||  || ||||||||||||| ||||||||| |||| ||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaa-caacaattacttatcaaaa 47355471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23808444 - 23808536
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 93  Q
    |||||| ||| |||||||||||||| |||||| | |||||||| ||||| ||| ||| ||||| ||||||||| |||||||  |||||||||||    
T  23808444 acatgtacaacattgcacatgttaaaataactgatagtagtaa-tttttcttggaaaacaacatttatttattcaaaagtttgatatttaatat 23808536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3168237 - 3168166
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| |||||||||||||| | |||||| ||| | |||||||| ||| ||| |||||||||||||||    
T  3168237 acatgtgcaacattgcacatgttaaaacaactaatagtgggaatttttt-ttggaaaacaacaattatttatt 3168166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23378673 - 23378598
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||| || ||||||| | |||||||| || ||| |||||||||||||  ||||||||||| ||||||    
T  23378673 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacaattatttgttaaaa 23378598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32543219 - 32543143
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||| |||| || ||||  |||  |||||||| | |||||||||||||  |||||||||||||||||||    
T  32543219 acatgtgcaatactgcatattttaaagtaataaaaagtagcatttttttattgaaagacaacaattatttattaaaa 32543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 33048237 - 33048173
Alignment:
Q  45 tttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattt 108  Q
    |||||||| ||||  |||||||||||||||||| |||  ||||||||||||||| ||||||||||    
T  33048237 tttttattaaaaaataacaattatttattaaaaagttatatatttaatataaaatatacaaattt 33048173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36578341 - 36578397
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    |||||||||||||||||||||||||   || ||||||||||||||| ||||| ||||    
T  36578341 acatgtgcaatattgcacatgttaaagcaattaaaagtagtaatttcttattaaaaa 36578397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 30109173 - 30109099
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||| |||||||  |||||||||   |||||||||||| |||||| |||  |||| |||||||||||||||||||    
T  30109173 atgtacaatattatacatgttaaagaaactaaaagtagcaattttatatgaaaaaacaacaattatttattaaaa 30109099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 38539096 - 38539231
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   |||||  |||| || ||    
T  38539096 acatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctattt--tatagaatat 38539193  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    ||||||||||||  ||| || | |||||||| ||||||    
T  38539194 acaaattttaagataaacttgccactttaaatttctta 38539231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 38561314 - 38561449
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   |||||  |||| || ||    
T  38561314 acatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctattt--tatagaatat 38561411  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    ||||||||||||  ||| || | |||||||| ||||||    
T  38561412 acaaattttaagataaacttgccactttaaatttctta 38561449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 39310910 - 39310780
Alignment:
Q  46 ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaa 144  Q
    |||| ||| ||| ||||||||||||||| |||||||  ||| ||||||| |||  |  |||||  ||  ||||||| ||| ||||||||| ||| ||       
T  39310910 ttttcttggaaaacaacaattatttattcaaaagttttatacttaatattaaatgtgaaaattccaatacaaaatttctattttaaactttttaacatgt 39310811  T
Q  145 gcaaatttgcacatgatagaaaaactctatt 175  Q
    ||||||||||||||||||||||||| |||||    
T  39310810 gcaaatttgcacatgatagaaaaaccctatt 39310780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 5875269 - 5875216
Alignment:
Q  115 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  5875269 aaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 5875216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 2222375 - 2222328
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  2222375 aactaaaagtagtaactttt-attgaaaaacaataattatttattaaaa 2222328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19889350 - 19889518
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  19889350 acatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaac 19889449  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  19889450 acaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 19889518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 36548628 - 36548460
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||||    
T  36548628 acatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaatattacatatttaatataaaaaat 36548529  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||||||||| |||||| ||||||||||||| ||   |||||||||||||||||| ||||||    
T  36548528 acaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgataaaaaaac 36548460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 5909450 - 5909282
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||||| ||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||     
T  5909450 acatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaac 5909351  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||| |||||||| |||||||||||||||||||||||   |||||||| ||||||||||||||||    
T  5909350 acaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttacacatgatagaaaaac 5909282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39757278 - 39757110
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||| | ||||||||||||||||||     
T  39757278 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaac 39757179  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||| |||| ||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  39757178 acaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 39757110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9331971 - 9332139
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||| ||| ||||||||||||||||||     
T  9331971 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaac 9332070  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||| |||||||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  9332071 acaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 9332139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3562046 - 3561878
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||| ||| ||||||| |||||||| | ||||||||||||||||||     
T  3562046 acatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaagctacatatttaatataaaaaac 3561947  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| |||||||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  3561946 acaagttttaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 12086099 - 12085931
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| ||||  ||||||| ||||||||||||||||||||||  |||||||||||||||||     
T  12086099 acatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaaatatttaatataaaaaac 12086000  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||| ||||||||||||||  |||||||||||||| |   |||||||||||||||||||||||||    
T  12085999 acaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaatttgcacatgatagaaaaac 12085931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 47120362 - 47120228
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||     
T  47120362 acatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaac 47120263  T
Q  101 acaaattttaagtcaaaattactactttaaacttc 135  Q
    |||| ||  |||||||| |||||| ||||||||||    
T  47120262 acaagttccaagtcaaagttactaatttaaacttc 47120228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7170012 - 7170180
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||      
T  7170012 acatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatg 7170110  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  7170111 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 7170180  T

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Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 384574 - 384429
Alignment:
Q  25 agataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattacta 124  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| |||||||| | |||||||||||||||||| |||| ||  |||| ||| ||||||    
T  384574 agataactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaaacaagttccaagttaaagttacta 384475  T
Q  125 ctttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    |||||||||||||| ||   ||||||||||| |||||||||||||||    
T  384474 ctttaaacttcttaacatgtgcaaatttgca-atgatagaaaaactc 384429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 24463123 - 24462958
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaa 99  Q
    ||||||| |||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||| ||||||||||||   | ||||||||||||||||      
T  24463123 acatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaac-aacaagtatttattaaaaaactacatatttaatataaaatg 24463025  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaa 166  Q
    |||||| ||||||||||| ||| || ||||||||||||| ||   ||||||||||||||||||||||    
T  24463024 tacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23982924 - 23982755
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||  ||||||||||  ||||||||||||||| |||| ||| |||||||||||||| ||||| |||| ||  ||||||||||||||| |    
T  23982924 acatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaata 23982825  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||||||| ||||||||||||| |||||| |    |||||||||||||||||||||||||    
T  23982824 cacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaac 23982755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24250323 - 24250417
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataa 95  Q
    ||||||||||||||||||||||||||  ||||||||||| ||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  24250323 acatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataa 24250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 47457630 - 47457461
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatt-ttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 98  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||  |||||||||||| ||||||| | || || ||||||||||     
T  47457630 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-taacaattatttatttaaaagctacacatataatataaaat 47457532  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
      | |||||  |||||||| ||||||||||||| || ||| ||   |||||||||||||||||||||||||    
T  47457531 gcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatgatagaaaaac 47457461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 18102364 - 18102232
Alignment:
Q  36 agtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataa-aaaatacaaattttaagtcaaaattactactttaaactt 134  Q
    ||||||||||||| |||||||| ||||||||||| |||||| ||| |||||||||||||| |||| |||| ||| |||||||| ||| || |||||||||    
T  18102364 agtagtaatttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaactt 18102265  T
Q  135 cttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||| ||   |||||||||||||||||||||||    
T  18102264 cttaacatgtgcaaatttgcacatgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 45501468 - 45501640
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||| ||||| || |||| ||||||||||||||| || ||||  ||||||||||| |||      
T  45501468 acatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagttttatatttaatattaaatg 45501567  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
    ||||| ||  ||  ||||||| ||| |||||||||||||  |   ||||||||||||||||||||||||||||    
T  45501568 tacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaatttgcacatgatagaaaaactct 45501640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25709568 - 25709398
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||| |||||||||||||||||   |||||||||||||||||||||||||| || ||||||| ||||||| ||||| | | |||||||||| |||      
T  25709568 acatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaatg 25709469  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 170  Q
     |||| ||  ||  |||| |||||| ||||||||||||| ||   ||||||||||||||||||||||||||    
T  25709468 aacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 25709398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33342998 - 33343166
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  33342998 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 33343096  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  33343097 ttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 33343166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19868123 - 19868245
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| || |||||||||||  |||||||  ||||||||||||||| |    
T  19868123 acatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaata 19868222  T
Q  100 tacaaattttaagtcaaaattac 122  Q
     |||| ||| ||| |||| ||||    
T  19868223 cacaagtttcaagacaaacttac 19868245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 46290020 - 46290188
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  46290020 acatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 46290118  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  46290119 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 46290188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 4969782 - 4969965
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||  ||||| ||| ||| | | ||||||||||| |||||||  ||||||||||| |||      
T  4969782 acatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatg 4969881  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattattaatca 183  Q
    ||||| ||  ||  ||||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||| ||| || ||||||    
T  4969882 tacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctaatactaatca 4969965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 39869132 - 39869271
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaaa 99  Q
    |||| ||||||||||||||||||||   |||||||| |||||| |||| |||||||||||||||||| ||||||||| ||  |||||||||||||||       
T  39869132 acatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaatgc 39869231  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatca 141  Q
     |||| ||| |||||||| ||||||||||| |||||||||||    
T  39869232 -acaagtttcaagtcaaa-ttactactttacacttcttatca 39869271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 24699146 - 24699240
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttgcatatttaatataaa 96  Q
    |||| |||||||||||||||||||||  ||||||| |||||| |||| |||||||| |||||||||||||||| |||||| |||||||||||||||    
T  24699146 catgagcaatattgcacatgttaagactactaaaa-tagtaacttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 42750298 - 42750459
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||| |||||||   |||||||| || ||| ||||||||||||| ||| ||||||||||| ||||||| ||  ||||||||  ||||    
T  42750298 acatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaa-caataattatttattaaaaagttacaattttaatat--aaaa 42750394  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    | ||||    ||||||||  ||||||||||||||||||| || | ||||||||||| |||||||||||    
T  42750395 tgcaaa---aaagtcaaagctactactttaaacttcttaacatatgcaaatttgcatatgatagaaaa 42750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32117824 - 32117992
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   ||||||||||| || ||    
T  32117824 acatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatttaatatagaatat 32117923  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||| |||  ||| || | |||||||| |||||| ||   |||||||||||||||||||||||||    
T  32117924 acaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32117992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34270275 - 34270439
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||    || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  34270275 acatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 34270369  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  34270370 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 34270439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 7899617 - 7899487
Alignment:
Q  39 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||||||||| |||||||| || |||| ||||||||||| |||  ||||||||||||||| |||||| || |||| |||| |||| | |||||| || ||    
T  7899617 agtaatttttcattgaaaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaacttaccattttaaatttttt 7899518  T
Q  138 atcacaagcaaatttgcacatgatagaaaaa 168  Q
    | ||   ||||||||||||||||||||||||    
T  7899517 aacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 8170593 - 8170697
Alignment:
Q  63 aattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgata 162  Q
    ||||||| ||||||||||  ||||||||||||||||||| || |||||||| ||| |||||||||||||||| ||| ||   | ||||||| ||||||||    
T  8170593 aattattgattaaaagttatatatttaatataaaaaataaaagttttaagttaaagttactactttaaactttttaacatgtgtaaatttgtacatgata 8170692  T
Q  163 gaaaa 167  Q
     ||||    
T  8170693 aaaaa 8170697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29692709 - 29692533
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||  |||||||||||||| | |||||| | || ||||||||| ||| ||| ||||||||||||||| |||||||  ||  || |||| ||       
T  29692709 acatgtgcatcattgcacatgttaaaacaactaataatattaattttttcttggaaaacaacaattatttattcaaaagttttatccttgatattaattg 29692610  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatta 176  Q
    | ||| ||||||  | ||||| ||| ||||||||||||| ||    |||||||||||||||||||||||||||||||    
T  29692609 tgcaagttttaataccaaatttctattttaaacttcttaacatgtacaaatttgcacatgatagaaaaactctatta 29692533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 12650831 - 12650906
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||| ||||||||||  |||||||| |||||| |||| ||||||||| | ||||||||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaa 12650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 8091470 - 8091312
Alignment:
Q  12 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaatttta 110  Q
    ||||||||||| ||   |||||||||||| || ||||||||||||| ||| ||||||||||| |||||||  |||||||| | ||||  || || ||  |    
T  8091470 attgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagttaca 8091371  T
Q  111 agtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |  |||| |||||| ||||||||||||| ||   | |||||||||||||||||||||||    
T  8091370 atgcaaagttactattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 8091312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 41331543 - 41331458
Alignment:
Q  82 catatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    ||||||||||||||||   |||| ||  |||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||    
T  41331543 catatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaa 41331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 12624649 - 12624783
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaata 101  Q
    ||||||||||||  |||| ||||| ||||||||| |||| |||||||||||||||  | |||||||||||| |||| ||| ||||||||||||||| | |    
T  12624649 atgtgcaatattatacatattaaggtaactaaaa-tagttattttttattgaaaaatatcaattatttattaaaaacttgtatatttaatataaaataca 12624747  T
Q  102 caaattttaagtcaaaattactactttaaacttctta 138  Q
    | || |||||| |||| |||| | |||||| ||||||    
T  12624748 c-aagtttaagacaaacttaccattttaaatttctta 12624783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 26300582 - 26300751
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||| ||||||||| ||||||| | ||||||||||| ||||| | |||||||||  || ||  | ||||| |||||||  | |||||||| |||| |    
T  26300582 acatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaa--aaaaaaaaattattaaaaagttatacatttaatacaaaata 26300679  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    ||||| ||| || ||||| |||||| ||||||||| ||| ||   ||||||||| ||||||| |||||||||    
T  26300680 tacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatgatggaaaaactc 26300751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39475857 - 39475927
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattattt 70  Q
    |||||||||| |||||||||||||| | |||||| |||||||| |||||| ||||||| ||||||||||||    
T  39475857 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttttttgaaaaacaacaattattt 39475927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 44806945 - 44807019
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||| |||||||||||| |  ||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  44806945 atgtgcaatattacacatgttaagacatttaaaagtagtattttttcactgaaaaacaataattatttattaaaa 44807019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 7040420 - 7040252
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatat-ttaatataaaaaa 99  Q
    |||| ||||| |||||| |||||||  ||||||||||  | || | ||||||| ||| ||||||||||||||||||| ||  |||| |||||| |||| |    
T  7040420 acatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatt-tatatattaatagaaaata 7040322  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  || |||||  || |||||||||||||||| ||   |||||||||||||||||| ||||||    
T  7040321 cacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaatttgcacatgatataaaaac 7040252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 24250617 - 24250678
Alignment:
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    |||||||| |||||||||||||||||||||||    ||||||| ||||||||||||||||||    
T  24250617 aagtcaaagttactactttaaacttcttatcatgttcaaatttccacatgatagaaaaactc 24250678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 31066894 - 31066829
Alignment:
Q  12 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||||||||    
T  31066894 attgcacatgttaaaataagtaaaagtagtaactttttattaaaaaacaagaactatttattaaaa 31066829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 47708008 - 47707915
Alignment:
Q  46 ttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||||| ||||| ||||||||||||||||||| |||  |||||||||| ||||  || || ||| || |||||||||||| |||||||||||||    
T  47708008 ttttatggaaaaacaacaattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactattttaaacttctta 47707915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38554247 - 38554323
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||| |||||||  |||||||||  ||||||||| | |||| ||||||||||||| |||||||||| ||||||||    
T  38554247 acatgtacaatattatacatgttaaactaactaaaaatcgtaaatttttattgaaaaacaacaattatatattaaaa 38554323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 22334080 - 22334020
Alignment:
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 170  Q
    |||||||| |||||||||||||||||||| ||    |||||||||||||||| ||||||||    
T  22334080 aagtcaaagttactactttaaacttcttaacatgtacaaatttgcacatgattgaaaaact 22334020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 27300438 - 27300534
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaa 97  Q
    ||||||||||||||| |||||||     ||||||||||||| |||||||||||||| ||  || |||||||||||| | | ||||||||||||||||    
T  27300438 atgtgcaatattgcatatgttaaatcttctaaaagtagtaatttttttattgaaaaacattaactatttattaaaaatctacatatttaatataaaa 27300534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 8420959 - 8420905
Alignment:
Q  44 ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    ||||||||| |||| || |||||||||||| |||||||| |||||||||||||||    
T  8420959 ttttttattaaaaagcatcaattatttattaaaaagttgtatatttaatataaaa 8420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 11680144 - 11680090
Alignment:
Q  44 ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    ||||| |||||||| ||||||||||||||| |||||||  |||||||||||||||    
T  11680144 tttttaattgaaaaacaacaattatttattaaaaagttatatatttaatataaaa 11680090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24639552 - 24639644
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatat 93  Q
    ||||||||||||| |||||||||||  ||| ||||| | | | ||||||||||| || ||||||||||| ||||||| | | ||||||||||||    
T  24639552 acatgtgcaatat-gcacatgttaaagtaattaaaaatggaatttttttattgacaaacaacaattattcattaaaaatatacatatttaatat 24639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 26037216 - 26037269
Alignment:
Q  114 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||    
T  26037216 caaaatttctattttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 29398189 - 29398132
Alignment:
Q  114 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    ||||||| ||| ||||||||||||| ||   ||||||||| |||||||||||||||||    
T  29398189 caaaatttctattttaaacttcttaacatgtgcaaatttgaacatgatagaaaaactc 29398132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 47200951 - 47201019
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag-ttgcatatttaatataaaa 97  Q
    |||| ||||||| ||||||||||||||||  || |||||||||||||||| ||  |||||||||||||||    
T  47200951 aactcaaagtagcaattttttattgaaaa-taaaaattatttattaaaagattatatatttaatataaaa 47201019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 3530242 - 3530207
Alignment:
Q  41 taattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3530242 taattttttattgaaaac-aacaattatttattaaaa 3530207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4161891 - 4161939
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt 49  Q
    ||||||| |||||||||||||||||   ||||||||||||||| |||||    
T  4161891 acatgtgtaatattgcacatgttaaaggaactaaaagtagtaacttttt 4161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 5833424 - 5833532
Alignment:
Q  61 acaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatg 159  Q
    |||| |||||||||||| | | ||||||||||||| ||   |||| || |||| | || ||||| |||||||||| ||| ||   |||||||||||||||    
T  5833424 acaactatttattaaaaagctacatatttaatatagaatgcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatttgcacatg 5833523  T
Q  160 atagaaaaa 168  Q
    |||||||||    
T  5833524 atagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 16800609 - 16800557
Alignment:
Q  45 tttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 97  Q
    ||||||||||||| ||||||||||||||||||  ||  |||||||||| ||||    
T  16800609 tttttattgaaaaacaacaattatttattaaattttttatatttaatacaaaa 16800557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29398283 - 29398227
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    |||||||||| |||||||||||||| | |||||| | || |||||||| ||||||||    
T  29398283 acatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27665212 - 27665044
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  27665212 acatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaac 27665113  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  27665112 acaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 27665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 16126727 - 16126559
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||     
T  16126727 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 16126628  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||| |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  16126627 acaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 16126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 14377438 - 14377600
Alignment:
Q  5 gtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaa 104  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  14377438 gtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaacacaa 14377537  T
Q  105 attttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
     ||| |||||||| |||||||||||||||||||||||    ||||||||||||||||||||||    
T  14377538 gtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaa 14377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12016676 - 12016844
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||     
T  12016676 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 12016775  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||| ||||||||||||||||||||||||  |   |||||||||||||||||||||||||    
T  12016776 acaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 12016844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16919322 - 16919151
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  16919322 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagttacatatttaatataaaaaac 16919223  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
    |||| ||| |||||||| |||||||||||||||| |||  |   |||||||||||||||||||| |||||||    
T  16919222 acaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaatttgcacatgatagataaactct 16919151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 19228435 - 19228601
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||     
T  19228435 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaac 19228534  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||    
T  19228535 acaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 26230021 - 26229885
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  26230021 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaagttacatatttaatataaaaaat 26229923  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    | ||||||||||||||| |||||| |||||||||||||    
T  26229922 ataaattttaagtcaaagttactattttaaacttctta 26229885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22705464 - 22705601
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||     
T  22705464 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaagttacatatttaatataaaaaac 22705563  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||| ||| |||| ||||||||||||||||||||||||    
T  22705564 acaagtttcaagttaaaattactactttaaacttctta 22705601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 13351378 - 13351242
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaatttttt-attgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaata 101  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||| |||||||||| |||||| ||||||||||| |    
T  13351378 atgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaattattaattaaaagttacatattaaatataaaaaaca 13351279  T
Q  102 caaattttaagtcaaaattactactttaaacttctta 138  Q
    ||| || ||||||||| ||||||||||||||||||||    
T  13351278 caagttctaagtcaaagttactactttaaacttctta 13351242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 16123291 - 16123455
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaataca 103  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||| ||||||| || |||||| ||| |||||||||||||||||| |||    
T  16123291 tgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgattaaatgttacatatttaatataaaaaacaca 16123390  T
Q  104 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    | ||   | |||||||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  16123391 agttcctaatcaaaattactaatttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 16123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 15411791 - 15411624
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||||| ||||| | ||||||||||||||||      
T  15411791 acatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaatg 15411692  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
     |||| ||| ||| |||| |||||| ||||||||||||| ||   ||||||||||||||| |||||||    
T  15411691 aacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaa 15411624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 8771021 - 8770887
Alignment:
Q  34 aaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaact 133  Q
    |||||||||| |||| | | ||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  8771021 aaagtagtaacttttcaataaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaaaaatttcaagtcaaaattactactttaaact 8770922  T
Q  134 tcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||| ||   |||||||||||||||||| |||||    
T  8770921 tcttaacatgtgcaaatttgcacatgataaaaaaa 8770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 169
Target Start/End: Original strand, 4821323 - 4821454
Alignment:
Q  38 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  4821323 tagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttctt 4821422  T
Q  138 atcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||   |||||||||||||| ||||||||||    
T  4821423 atcatgtgcaaatttgcacataatagaaaaac 4821454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 39904216 - 39904079
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||| | ||| ||||||||||||||     
T  39904216 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatgtttaatataaaaaac 39904117  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    | || ||  |||| ||| ||||||||||||||||||||    
T  39904116 ataagttccaagttaaatttactactttaaacttctta 39904079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10690792 - 10690915
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||||||||||     
T  10690792 acatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 10690891  T
Q  101 acaaattttaagtcaaaattacta 124  Q
    | || ||| || | ||||||||||    
T  10690892 ataagtttcaaattaaaattacta 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 38185953 - 38185881
Alignment:
Q  172 tattattaatcaggtcctacacatcccatatcacatttattaaac-cccctcttttgacctccacgtgtcaca 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38185953 tattattaatcaggtcctacacatcccatatcacatttattaaacccccctcttttgacctccacgtgtcaca 38185881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9747326 - 9747495
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||| | ||||||||||  |||||||||||||||| | ||||||||||| |||||| ||||| |  ||||| | ||||||||||||||||      
T  9747326 acatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaatg 9747425  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  ||| ||||||||||| ||||||||||||| ||   | |||||||||||||||||||||||    
T  9747426 aacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatgatagaaaaac 9747495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 5583726 - 5583558
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  5583726 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 5583628  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||| ||||||||||||||    
T  5583627 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaac 5583558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7720124 - 7720296
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||  ||       
T  7720124 acatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtttaatatttaatactaagtg 7720223  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
    ||||  ||  ||  ||||||| |||  |||||||| ||| |||  ||||||||||||||||||||||||||||    
T  7720224 tacacgttccaatacaaaatttctatcttaaactttttaacacgtgcaaatttgcacatgatagaaaaactct 7720296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 15231883 - 15232011
Alignment:
Q  44 ttttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcac 142  Q
    |||||||||||||| ||| | ||||||||||||| ||| |||||||||||| |||   |||| |||||||||||| |||| ||||||||||||||| ||     
T  15231883 ttttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacat 15231982  T
Q  143 aagcaaatttgcacatgatagaaaaactc 171  Q
      |||||||||||||| ||||||||||||    
T  15231983 gtgcaaatttgcacataatagaaaaactc 15232011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20566186 - 20566014
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||  ||||||||| ||| || | ||||||||||| |||||||||||||||||||  ||   ||||||||| |||| |    
T  20566186 acatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatttaataaaaaata 20566087  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
     |||| ||  ||  ||||  || |||||||||||||||| ||   | ||||||||||||||||||||||||||    
T  20566086 cacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaactct 20566014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 43806369 - 43806538
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | || ||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  43806369 acatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatg 43806468  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||| ||  ||||||| ||| ||||||||| ||| ||   |||||||| |||| |||||||||||    
T  43806469 tacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaatttacacacgatagaaaaac 43806538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23932574 - 23932746
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   |||||||| |||||| |||  ||||||||  |||||||||||||| |||||||  ||| |||||||||||      
T  23932574 acatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatg 23932673  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
     |||| ||   |  |||  |||||| |||||||||||||  | | ||||||||||||||||||||||||||||    
T  23932674 cacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaactct 23932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 2060183 - 2060044
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaa-agttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    ||||||||||| ||| |||| ||| |||| |||||||||||||||||| || | |||||||||||||||| | |||||||  |||| ||| |||||||||    
T  2060183 aactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactactt 2060084  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||| |||||| ||   | |||||||||||| ||||||||    
T  2060083 taaatttcttaacatgtgtaaatttgcacatcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36612900 - 36612762
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||| |||||||| |||||||| |||||||| ||||| ||| ||| ||||| ||||||||| |||||||  ||||||||||| |||      
T  36612900 acatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatatttaatattaaatg 36612801  T
Q  100 tacaaattttaagtcaaaattactactttaaacttctta 138  Q
    ||||| ||||||  |||||||  || |||||||||||||    
T  36612800 tacaagttttaatacaaaatttttattttaaacttctta 36612762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36620751 - 36620613
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||| |||||||| |||||||| |||||||| ||||| ||| ||| ||||| ||||||||| |||||||  ||||||||||| |||      
T  36620751 acatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatatttaatattaaatg 36620652  T
Q  100 tacaaattttaagtcaaaattactactttaaacttctta 138  Q
    ||||| ||||||  |||||||  || |||||||||||||    
T  36620651 tacaagttttaatacaaaatttttattttaaacttctta 36620613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 43388933 - 43388859
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||| ||||   |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  43388933 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 43388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 7757954 - 7757781
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||| |||||||||| ||||||||||||  || |||||||| ||||||||||||||||| |  |||||||  |||||||||| ||||      
T  7757954 acatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttatt-aaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 7757856  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 174  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   | ||||||||||||||||||||||| ||||    
T  7757855 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatgatagaaaaaccctat 7757781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 24729719 - 24729577
Alignment:
Q  28 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactact 126  Q
    ||||||||| |||||| |||||||||||||  || ||||||||||||||| |||   || |||||| |||| |||||||||  ||  |||| |||||| |    
T  24729719 taactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagttactatt 24729620  T
Q  127 ttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| |||||| ||   |||||||||||||||||||||||||    
T  24729619 ttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 24729577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9450266 - 9450435
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||| ||||  ||  ||||| ||  || | ||||||||||| ||||||||||||||| |||| ||  |||||||||| |||| |    
T  9450266 acatgtgcaatattgcacatcttaaagtagttaaaaataaaaactatttattgaaaaacaacaattatttattaaaaaattatatatttaatagaaaata 9450365  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||||||  ||  ||||  |||||||||||| |||||| ||   ||| |||||||||||||||||||||    
T  9450366 cacaaattccaatacaaacatactactttaaatttcttaacatgtgcagatttgcacatgatagaaaaac 9450435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 22162237 - 22162149
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaa 97  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||| ||||||||| | | |||| |||||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaatctacatagttaatataaaa 22162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 25998171 - 25998002
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||| |||||||||||||||  |||||||||||   || ||||||||||||| ||||||||||||||| ||||| | |||||||| ||| |||      
T  25998171 acatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatatttattattaaatg 25998072  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  ||  |||||||| |  |||||  || ||| |||| |||||||||||| ||||||||||||    
T  25998071 aacaagttccaatgcaaaattaattttttaatttttttaacacatgcaaatttgcacgtgatagaaaaac 25998002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12438816 - 12438723
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataa 95  Q
    ||||||||||||||||| ||||| ||| |||||||| || ||| |||| ||| ||||||||||||||||||||||||  |  |||||||||||||    
T  12438816 acatgtgcaatattgcatatgttcagacaactaaaaataataacttttcatt-aaaaccaacaattatttattaaaaactatatatttaatataa 12438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 34214112 - 34213943
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaatta-tttattaaaagttgcata--tttaatataaaaaatacaaa 105  Q
    |||| ||||||||||||   |||||||| |||||| ||||||||||||||||||||||| ||||| |||||||  |||  ||||||| ||||  | |||     
T  34214112 aatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttatatatttttaataaaaaatgttcaag 34214013  T
Q  106 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 175  Q
    ||  ||   |||||||||| |||||| |||||| ||   ||||||||||||| |||||||||| ||||||    
T  34214012 ttccaatgaaaaattactattttaaatttcttaacatgtgcaaatttgcacacgatagaaaaattctatt 34213943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 16493691 - 16493530
Alignment:
Q  13 ttgcacatgttaagataactaaaagtagt-aat-tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaatttt 109  Q
    |||||||||||||   || |||||||||| ||| ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || ||||||     
T  16493691 ttgcacatgttaaagcaattaaaagtagttaatgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 16493592  T
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    ||  ||||||| | | | ||||||||||| ||   |||||||||||||||||||||||||||    
T  16493591 aatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 16493530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 38248579 - 38248420
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaatacaaatt 107  Q
    |||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||||| |  |||| ||  |||||||||| ||||  | ||| ||    
T  38248579 aatattgcacatgttaaggtaactaaaa-tagcaagtttttatt-aaaaccaacaattatttaacaaaaaattatatatttaatacaaaatgttcaagtt 38248482  T
Q  108 ttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
      ||   |||||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  38248481 ccaatgtaaaattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 38248420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 5853588 - 5853461
Alignment:
Q  45 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 143  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  5853588 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 5853489  T
Q  144 agcaaatttgcacatgatagaaaaactc 171  Q
     |||||||||||||||||||||||||||    
T  5853488 tgcaaatttgcacatgatagaaaaactc 5853461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 45062207 - 45062378
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||| |||||||  | ||||||| | || ||||||| |||| |||||||| |||| ||| ||||||||||| ||||||| ||| ||||||||||||      
T  45062207 acatgtacaatattaaatatgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatg 45062306  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
     |||| ||  ||   ||| |||||| ||| |||||||||  |   |||||||||||||||||||||||||||    
T  45062307 cacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaactc 45062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 40562241 - 40562171
Alignment:
Q  6 tgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaa 76  Q
    |||||||||| |||||||||  ||  |||||| ||||| ||||||||||||| ||||||||||||||||||    
T  40562241 tgcaatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattatttattaaa 40562171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 41492292 - 41492131
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattt 108  Q
    ||||||| |||| |||||  || |||||||| || ||| ||||||||||  |||||||||||   |||| || ||||||||||| ||||   |||| |||    
T  41492292 aatattgtacatattaaggaaattaaaagtaatattttattattgaaaaagaacaattattttaaaaaactt-catatttaataaaaaatgcacaagttt 41492194  T
Q  109 taagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
     |||| ||| ||| |||||||||||||||||||   ||||||||  ||||||||||| |||||    
T  41492193 caagttaaagttattactttaaacttcttatcatgtgcaaatttatacatgatagaagaactc 41492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 2051631 - 2051720
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    ||||||| | ||||||| | |||||||| ||| || ||||||||||||| ||||||||||||||| |||| ||  |||||||||||||||    
T  2051631 aatattgtatatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaatttaaatatttaatataaaa 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 12919520 - 12919351
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    |||||||||||||||||||||||||   || |||||||| ||| ||||||||||||||  | |||| ||||||| ||||  | ||||||||||||||||     
T  12919520 acatgtgcaatattgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaaactacatatttaatataaaat 12919421  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
      |||| ||| |||  ||| |||||| |||||| || ||| ||   | |||||||||||||||| |||||    
T  12919420 gaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaatttgcacatgataaaaaaa 12919351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 29142111 - 29142264
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    |||||| |||||||| ||||| ||||||| ||||||||| ||||| |||| ||  ||||||||||| |||  ||||| ||  ||  ||||||| |||  |    
T  29142111 aactaatagtagtaactttttcttgaaaaacaacaattacttattcaaaaattttatatttaatattaaatgtacaagttaaaatacaaaatttctatat 29142210  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaaactctattattaat 181  Q
    ||||||||| | ||   | ||||||||||||||||||||||| || ||||||||    
T  29142211 taaacttctaaacatgtgtaaatttgcacatgatagaaaaaccctgttattaat 29142264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 22704590 - 22704717
Alignment:
Q  45 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 143  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | |||||||||||  |      
T  22704590 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaagatg 22704689  T
Q  144 agcaaatttgcacatgatagaaaaactc 171  Q
     |||||||||||||||||||||||||||    
T  22704690 tgcaaatttgcacatgatagaaaaactc 22704717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 26003431 - 26003348
Alignment:
Q  84 tatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||||||||| |||  ||||||||| ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 26003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34817553 - 34817651
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||| ||||||||||||| | |||| |||||||||| ||  || | ||||||||||| ||||||||||||||| |||||||  |||||||||| ||||||    
T  34817553 acatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaa-caacaattatttattaaaaagttatatatttaataaaaaaaa 34817651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 4576423 - 4576326
Alignment:
Q  72 ttaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||||  ||||||||||| |||  ||||| ||| ||  ||||||| ||| |||||| |||||| || | || ||||||||||||||||||||||    
T  4576423 ttaaaagttttatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaatttcttaacatatgcgaatttgcacatgatagaaaaac 4576326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4579957 - 4579889
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatt 69  Q
    |||||||||||||| |||||||||||  |||||||  |||||| |||| |||||||| || ||||||||    
T  4579957 acatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattatt 4579889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 6109523 - 6109575
Alignment:
Q  125 ctttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattat 177  Q
    |||||||||||||| ||   ||||||||||||||||||||||||| |||||||    
T  6109523 ctttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctattat 6109575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 37471903 - 37471771
Alignment:
Q  9 aatattgcacatgttaagat-aactaaaagtagtaatttttt-attgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaa 105  Q
    ||||||||||||||| | |  |||||||| ||||| |||||| |||||||  ||||||| |||||||||||   | ||||||||||||||||   ||||     
T  37471903 aatattgcacatgtttaaagcaactaaaaatagtattttttttattgaaagacaacaataatttattaaaaaactacatatttaatataaaatgaacaag 37471804  T
Q  106 ttttaagtcaaaattactactttaaacttctta 138  Q
    ||| ||| |||| |||||| |||||||||||||    
T  37471803 tttcaagacaaagttactattttaaacttctta 37471771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 8065247 - 8065301
Alignment:
Q  115 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  8065247 aaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 8065301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 15749336 - 15749278
Alignment:
Q  36 agtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 93  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| ||  |||||||||||    
T  15749336 agtagtaattttttcttgaaaaacaacaattatttattcaaaaattttatatttaatat 15749278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 21470877 - 21470831
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttt 48  Q
    ||||||||||||||||||| |||| | |||||||||||||| |||||    
T  21470877 catgtgcaatattgcacatattaaaagaactaaaagtagtatttttt 21470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40503150 - 40503080
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||| ||||||||  ||||| |||| | || ||||||||  || |||||||||||||||||||||||||||    
T  40503150 acatatgcaatatcacacatattaaaacaattaaaagtaacaagtttttattgaaaaccaacaattattta 40503080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14285435 - 14285371
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta 74  Q
    ||||||||| |||||||  ||| ||||||||| |||||||||||||||   |||||||||||||||    
T  14285435 aatattgcagatgttaaagtaa-taaaagtagaaattttttattgaaataaaacaattatttatta 14285371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26003660 - 26003603
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 58  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| | ||||||    
T  26003660 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttttggaaaac 26003603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 38327861 - 38327893
Alignment:
Q  45 tttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||| |||||||||||||||||||    
T  38327861 tttttattgaaaatcaacaattatttattaaaa 38327893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 11610924 - 11611088
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  11610924 acatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaac 11611023  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaa 165  Q
    |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||    
T  11611024 acaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20938066 - 20938237
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatat-aaaaaa 99  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||| ||||||| || |||||||||||| ||||||    
T  20938066 acatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaattacatatttaatataaaaaaa 20938165  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
     |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  20938166 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaactc 20938237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13495303 - 13495472
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||  | ||||||||||||||||      
T  13495303 acatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaatg 13495402  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  ||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||    
T  13495403 cacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 16875175 - 16875025
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaa 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| | |||||||||||||||||| |||| ||| |||| |||     
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaag 16875076  T
Q  119 ttactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||||||||||||||| ||   ||||||||||||| |||||||||||    
T  16875075 ttactactttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 16875025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 3863339 - 3863507
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||| || |||||||| |||||||| | ||||||||||||||||||     
T  3863339 acatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagctacatatttaatataaaaaac 3863438  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||  ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  3863439 acaagttccaagctaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3863507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 38389456 - 38389625
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||      
T  38389456 acatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatg 38389555  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  ||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  38389556 cacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38389625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 50364200 - 50364337
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||| |||||||||||| ||| |||||||||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  50364200 acatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagttacatatttaatataaaaaac 50364299  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||| ||  |||||||| ||||||||||||||||||||    
T  50364300 acaagttccaagtcaaagttactactttaaacttctta 50364337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 51339352 - 51339242
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| | | ||||||||||||||||     
T  51339352 acatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaagctacgtatttaatataaaaaac 51339253  T
Q  101 acaaattttaa 111  Q
    ||||| |||||    
T  51339252 acaaactttaa 51339242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 54621386 - 54621256
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||| ||| |||||||||||||||| |||||| ||| ||||||||||||||||||     
T  54621386 acatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaatgttacatatttaatataaaaaac 54621287  T
Q  101 acaaattttaagtcaaaattactactttaaa 131  Q
    |||| ||  |||||||| |||||| ||||||    
T  54621286 acaacttccaagtcaaagttactaatttaaa 54621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 46492510 - 46492339
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaa-aagttgcatatttaatataaaaaata 101  Q
    |||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||||||||||||||  ||||  |||||||||| ||||  ||    
T  46492510 atgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaatacaaaatgta 46492411  T
Q  102 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactcta 173  Q
    ||| ||| ||  |||| ||||||||||||| |||||| |    | |||||||||||||||||||||||||||    
T  46492410 caagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatgatagaaaaactcta 46492339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32553376 - 32553544
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||| ||||||||||| ||| |||||||||||| |||| |||||||| ||| |||||||  |||||  || ||||||||||||||||||     
T  32553376 acatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaatattacatatttaatataaaaaac 32553475  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||| || | ||| ||| || ||||||||||||| ||   | |||||| ||||||||||||||||    
T  32553476 acaagtttcaaattaaagttattaatttaaacttcttaacatgtgtaaatttacacatgatagaaaaac 32553544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 40497073 - 40497224
Alignment:
Q  17 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtca 115  Q
    ||||||||||  ||||||||||||||| |||||||||||| | |||||||| ||||||||| | | |||| |||||||||||   |||| || ||||| |    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattgaaatc-aacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagtta 40497171  T
Q  116 aaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    || |||||||||||||||||||||||   ||||||||||||||||||||||||    
T  40497172 aagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 38 - 169
Target Start/End: Original strand, 29686367 - 29686498
Alignment:
Q  38 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||||| |||| | |||| | |||||||||||||||||||| |  |||| |||||||||||| |||| || ||||| ||| |||||||||||||||||||    
T  29686367 tagtaacttttcactgaatatcaacaattatttattaaaagctatatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttctt 29686466  T
Q  138 atcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||   |||||||||||||||||||||||||    
T  29686467 atcatgtgcaaatttgcacatgatagaaaaac 29686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2571278 - 2571446
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  2571278 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 2571376  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  2571377 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 2571446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 36426579 - 36426409
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaatt--ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||  |||||| ||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  36426579 catgtgcaacattgcacatgttaaaatatctaaaagtagtaattttttttatcgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 36426480  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
      |||| ||  ||||||||||||| ||||||||||||||| ||   | |||||| ||||||||||||||||    
T  36426479 gcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgtaaatttacacatgatagaaaaac 36426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 51618059 - 51618231
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||| | ||||||||| || || |||||| |||||| |||||||||||||||||||  |  |||||||||| ||||  |    
T  51618059 acatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa--tatatatttaatacaaaatgt 51618156  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 175  Q
    |||| ||  ||  |||| |||| | || |||||||||| ||   ||||||||||||||||||||||||| |||||    
T  51618157 acaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 51618231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 50204412 - 50204590
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||||||||| ||| |||  ||||||||| |||| |||||||  ||||||||||| |||      
T  50204412 acatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagttttatatttaatattaaatg 50204511  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattatt 178  Q
    ||||  ||  ||  ||||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||| || |||||    
T  50204512 tacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttttatt 50204590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10307776 - 10307944
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||| |||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  10307776 acatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 10307874  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  10307875 ttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 10307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23638218 - 23638050
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||  ||||||||| ||||| |||||||||| ||| ||||||||| || ||||||||| || |||||||| ||||||||||||||| |    
T  23638218 acatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaagttgtatatttaatataaaata 23638119  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||| ||| | || |||| | |||||| |||||| ||   |||||||||| ||||||| |||||    
T  23638118 cacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaatttgctcatgatataaaaa 23638050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 54527875 - 54527707
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  54527875 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatg 54527776  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||| ||  ||  |||||||  || |||||| |||||| ||   |||||||||||||| |||||||||    
T  54527775 tacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacataatagaaaaa 54527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12515642 - 12515573
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||    
T  12515642 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatt-aaaaccaacaattattta 12515573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 46845607 - 46845533
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||| ||||   |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  46845607 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 46845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 38786463 - 38786355
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactacttt 128  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||||  | || ||||| |||||||   |||||||| || |||||||||||| |||    
T  38786463 aactaaaaatagtaattttttattgaaaat-aacaattatttattaaaaaatacacatttagtataaaatccacaaatttcaaatcaaaattactatttt 38786365  T
Q  129 aaacttctta 138  Q
    ||||||||||    
T  38786364 aaacttctta 38786355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 24978693 - 24978825
Alignment:
Q  38 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||||| |||||||||| |||||| ||||||| ||||||| || |||||| ||| ||||||| |||| ||| |||||||  | |||||||||||||| ||    
T  24978693 tagtaactttttattgagaaccaataattattgattaaaaattacatattaaatttaaaaaacacaagtttcaagtcaacgtaactactttaaacttgtt 24978792  T
Q  138 atcacaagcaaatttgcacatgatagaaaaact 170  Q
    | ||   ||||| ||| ||||||||||||||||    
T  24978793 aacatgtgcaaacttgtacatgatagaaaaact 24978825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37444156 - 37444231
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||    
T  37444156 acatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaatcaacaattaattattaaaa 37444231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 42180061 - 42180229
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | | ||||||||| |||||||||  ||||||||||| |||      
T  42180061 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatg 42180160  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||| ||  ||  |||||||  || ||||||||||||| ||   |||||||| |||||||||||||||    
T  42180161 tacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 42180229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 23803180 - 23803049
Alignment:
Q  36 agtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaactt 134  Q
    |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| ||| |||||| ||  ||  ||||||| ||| |||||||||    
T  23803180 agtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaactt 23803081  T
Q  135 cttatcacaagcaaatttgcacatgatagaaa 166  Q
    |||| ||   ||||||||||| ||||||||||    
T  23803080 cttaacatgtgcaaatttgcatatgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 38785924 - 38786059
Alignment:
Q  36 agtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaactt 134  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||||  |||||||||||||||  ||||| ||  ||  ||||||| ||| |||||||||    
T  38785924 agtagtaatttttttttgaaaaacaacaattatttatttgaaagttttatatttaatataaaacgtacaagttccaatacaaaatttctattttaaactt 38786023  T
Q  135 cttatcacaagcaaatttgcacatgatagaaaaact 170  Q
    |||| | || |||| |||| | ||||||||||||||    
T  38786024 cttaactcatgcaagtttggatatgatagaaaaact 38786059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2379238 - 2379165
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||    ||||||||||||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattgaa---taacaattatttattaaaa 2379165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 35094972 - 35095092
Alignment:
Q  8 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatt 107  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||| || || ||||   | |||||||| ||||||||||||||| ||| |||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaaacatcatttat---taaaaagttgtatatttaatataaaatatataaatt 35095068  T
Q  108 ttaagtcaaaattactactttaaa 131  Q
    | |||  ||| |||||| ||||||    
T  35095069 tcaagataaatttactattttaaa 35095092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24569406 - 24569330
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||| ||||||||||| ||||| || || ||| ||||||||||||| || ||||||||||||||||    
T  24569406 acatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaa 24569330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 11611095 - 11611154
Alignment:
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  11611095 aagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 11611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 51567987 - 51567821
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    ||||| |||| |||||||||||||| | |||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||  ||||||||||  |||     
T  51567987 acatgcgcaacattgcacatgttaaaacaactaatagtagtaacttttttcttggaaaacaacaattatttattcaaaagttttatatttaatagtaaat 51567888  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     ||||| ||| ||  ||||||| ||| ||||||   |||| ||   ||||||||||||||||||||||||    
T  51567887 gtacaagtttcaatacaaaatttctattttaaa---cttaacatgtgcaaatttgcacatgatagaaaaa 51567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 9710964 - 9711029
Alignment:
Q  12 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||| | |||||||| |||||| ||||||||||||| ||||||||||| |||||||    
T  9710964 attgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaa 9711029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37055535 - 37055367
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||| |||||||||| |||||||   |||||||| |||||| |||  ||||||||  |||||||||||||| |||||||  ||| |||||||||||||    
T  37055535 acatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaaaa 37055436  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||   |  |||  |||||| |||||||||||||  |   |||||||| |||||||||||||||    
T  37055435 cacaagttccgatacaactttactattttaaacttcttaatatgtgcaaattttcacatgatagaaaaa 37055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 41151734 - 41151810
Alignment:
Q  92 ataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||||||||||| ||  ||||  ||||||||||||||||||||||||||   | ||||||||||||||||||||||    
T  41151734 ataaaaaatacaagttccaagttcaaattactactttaaacttcttatcatgtgtaaatttgcacatgatagaaaaa 41151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 23523065 - 23523124
Alignment:
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  23523065 aagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 23523124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 31318660 - 31318818
Alignment:
Q  13 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaat--tatttattaaaag-ttgcatatttaatataaaaaatacaaatttt 109  Q
    ||||||||||||| | |||||| ||| |||||||||| ||||||| |||||||  |||||||| |||| ||  ||||||||||| |||  ||||| ||      
T  31318660 ttgcacatgttaaaacaactaatagtggtaattttttcttgaaaaacaacaattatatttattcaaagattttatatttaatattaaatgtacaagttcc 31318759  T
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||  ||||||| |||  |||||||||||| ||   |||||||| |||||||||||||||    
T  31318760 aatgcaaaatttctatcttaaacttcttaacatgtgcaaattttcacatgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 33474598 - 33474471
Alignment:
Q  45 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 143  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  33474598 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 33474499  T
Q  144 agcaaatttgcacatgatagaaaaactc 171  Q
     |||||||||||||||||||||||||||    
T  33474498 tgcaaatttgcacatgatagaaaaactc 33474471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37332124 - 37332253
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||   |||||||| ||  ||||||||||| |||| ||  || ||||||| |||| ||  ||||||||||||||| |     
T  37332124 acatgtgcaatattgcacatgttaatgcaactaaaattacaaattttttattaaaaaacattaa-tatttatgaaaaattatatatttaatataaaatac 37332222  T
Q  101 acaaattttaagtcaaaattactactttaaa 131  Q
    |||||||| ||| |||| |||| | ||||||    
T  37332223 acaaatttaaagacaaacttaccattttaaa 37332253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30214178 - 30214102
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag 78  Q
    |||||||||||||| |||||  ||||  |||||||| |||||| |||| |||||||| ||||||||||||||||||||    
T  30214178 acatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaag 30214102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47386931 - 47387008
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattg-aaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||| ||| ||||   ||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  47386931 acatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaa 47387008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 53794781 - 53794870
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    |||||||||||||||||   |||||||| || ||| | |||||||||||  |||||| ||||||| ||||||| ||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttacatatttaatataaaa 53794870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24086993 - 24087065
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| ||||||||| |||| | |||||| |||||||| ||||| || |||| |||||||||||||||    
T  24086993 acatgtgcaacattgcacatcttaaaacaactaacagtagtaaatttttcttaaaaaacaacaattatttatt 24087065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 53718323 - 53718454
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta--aaagttgcatatttaatataaaaaatacaaat 106  Q
    |||||||||||||||||    | |||| |||| || |||||||| |||| ||| ||||||||||||  ||| || |||| |||||||||||  |||||||    
T  53718323 aatattgcacatgttaaagagattaaatgtagcaagtttttattaaaaaacaataattatttattagaaaatttacatacttaatataaaatgtacaaat 53718422  T
Q  107 tttaagtcaaaattactactttaaacttctta 138  Q
    |||||   |||| ||||| |||||||||||||    
T  53718423 tttaacataaaactactattttaaacttctta 53718454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 54027098 - 54027043
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 58  Q
    ||||||||||||||||||||||||||| |||||||| || || ||||||||||||||    
T  54027098 catgtgcaatattgcacatgttaagat-actaaaagaagcaactttttattgaaaac 54027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 13879973 - 13879883
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatat 93  Q
    |||||||||||| ||||| |||| |||||| |||||   || ||||||||||||||| ||||||||||||||||| | | ||||||||||||    
T  13879973 atgtgcaatattacacatcttaaaataactgaaagtgaaaactttttattgaaaacc-acaattatttattaaaaatatacatatttaatat 13879883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 49396472 - 49396558
Alignment:
Q  83 atatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||||||||||   | ||||||||| ||||| ||||||||||||||||||||  |    |||||||||||||| |||||||||    
T  49396472 atatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatttgcacatggtagaaaaac 49396558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1569359 - 1569262
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttgcatatttaatataaaa 97  Q
    |||| ||||||||||||||| ||||   |||   || ||||||||||||||| |||| ||||||| |||||||| |||||| ||||| ||||||||||    
T  1569359 acatatgcaatattgcacattttaaagcaacccgaactagtaattttttattaaaaaacaacaataatttattagaaagttacatatctaatataaaa 1569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8497592 - 8497513
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa---ttttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||| |||||||||||||| | ||||||||||| |||   ||||||||||||||   ||||||| |||||||||    
T  8497592 acatgtgcaacattgcacatgttaaaacaactaaaagtaataaggcttttttattgaaaaattacaattaattattaaaa 8497513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 22103090 - 22103031
Alignment:
Q  44 ttttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaa 104  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||||    
T  22103090 ttttttattgaaaac-aacaattatttatgaaaaaatgcatatttaatattaaatatacaa 22103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 27549549 - 27549721
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaa---ttttttattgaaaaccaacaattatttat-taaaagttgcatatttaata---taa 95  Q
    |||||||| |||||||||||||| | |||||||||||||||   ||||| ||| |||  || ||||||||| |  ||||||| |||| ||||||   |||    
T  27549549 atgtgcaacattgcacatgttaaaacaactaaaagtagtaatattttttaattaaaatacatcaattatttgtcaaaaagttacatagttaataatgtaa 27549648  T
Q  96 aaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||  ||||| || |||| |||| |||||||| |||| || ||| ||   |||||||||||||| |||||||||    
T  27549649 aatgtacaagttataagacaaacttactactctaaattttttaacatgtgcaaatttgcacataatagaaaaa 27549721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43750061 - 43750117
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    ||||| ||||||||||||||||||||| | |||||||||||||| ||| | ||||||    
T  43750061 acatgggcaatattgcacatgttaagacatctaaaagtagtaatgtttcactgaaaa 43750117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 35414930 - 35414807
Alignment:
Q  49 tattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagca 147  Q
    ||||||||| |||||||||||| || |||||||  ||||| |||| |||| |||||| ||  ||   ||| |||||| ||| ||||||||| ||   | |    
T  35414930 tattgaaaaacaacaattatttgttcaaaagttatatattaaatacaaaatatacaacttccaatataaagttactattttgaacttcttaacatgtgta 35414831  T
Q  148 aatttgcacatgatagaaaaactc 171  Q
    ||||||||||||||||||||||||    
T  35414830 aatttgcacatgatagaaaaactc 35414807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 38989455 - 38989494
Alignment:
Q  10 atattgcacatgttaagataactaaaagtagtaatttttt 49  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  38989455 atattgcacatgttaaaataactaaaagtaataatttttt 38989494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 40930175 - 40930230
Alignment:
Q  115 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 170  Q
    |||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||||    
T  40930175 aaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 40930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 36812371 - 36812444
Alignment:
Q  104 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattatt 178  Q
    ||||| || ||||| |||||||||||||||||||| ||   |||||||| || | ||||||||||||||||||||    
T  36812371 aatttcaaatcaaagttactactttaaacttcttaacatgtgcaaatttaca-aggatagaaaaactctattatt 36812444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 49396367 - 49396436
Alignment:
Q  8 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||| |||||||   |||||||| ||  ||||||| |||||||| | |||||||||||||||||    
T  49396367 caatattgcatatgttaaaggaactaaaaataacaatttttgattgaaaaactacaattatttattaaaa 49396436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15863074 - 15863002
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    ||||||||||||||||||||||||    || ||||||||| || |||  ||||||||  ||||||||||||||    
T  15863074 acatgtgcaatattgcacatgttacaggaattaaaagtagcaactttacattgaaaaagaacaattatttatt 15863002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 22178027 - 22177972
Alignment:
Q  48 ttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaa 104  Q
    ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||||    
T  22178027 ttattgaaaac-aacaattatttatgaaaaaatgcatatttaatattaaatatacaa 22177972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35415190 - 35415134
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    ||||||||| ||||||||||||||| | |||||||| |||||| ||| |||| ||||    
T  35415190 acatgtgcattattgcacatgttaaaacaactaaaaatagtaagtttgtattcaaaa 35415134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5700 - 5868
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatttt-ttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||  | ||||||||||||||||||    
T  5700 acatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaa 5799  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||||||||||||| ||| |||||||||||||||| ||| ||   ||||||||||||||||||||||||    
T  5800 tacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 52947 - 52779
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||     
T  52947 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaac 52848  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  52847 acaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 52779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 145687 - 145855
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||     
T  145687 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaac 145786  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  145787 acaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10129113 - 10129281
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||     
T  10129113 acatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 10129212  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||| |||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  10129213 acaagttccaagttaaaattactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 10129281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39701971 - 39701803
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||| | |||||||||| ||||||||||||||||||     
T  39701971 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagttacatatttaatataaaaaac 39701872  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||| |||||||| |||||||||||||||| ||| ||   |||||||||||||||||||||||||    
T  39701871 acaaatttcaagtcaaagttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaac 39701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 7140627 - 7140459
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||  | ||||||||||||||||||     
T  7140627 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaac 7140528  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||| ||||||||||||||||||||||||  |   |||||||||||||||||||||||||    
T  7140527 acaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 7140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 13328109 - 13327942
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||     
T  13328109 acatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaac 13328010  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||| ||| |||||||| |||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  13328009 acaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 9743871 - 9744011
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  9743871 acatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaac 9743970  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatca 141  Q
    | || ||  |||||||| |||||||||||||||||||||||    
T  9743971 ataagttccaagtcaaagttactactttaaacttcttatca 9744011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 19344005 - 19343836
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaata-taaaaaa 99  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||||| | |||||||| ||||||||||| |||||||    
T  19344005 acatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagtaaaagttacatatttaatattaaaaaa 19343906  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||| ||||||||||||||||||||||| | ||| ||   |||||||||||||||||| ||||||    
T  19343905 tacaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaac 19343836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 1203611 - 1203784
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||| ||||||||||||||| |||||||||||||||  ||||| |||| ||||||||| || ||||||| |||||  ||| ||||||||||||||||||     
T  1203611 acatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaaacaaataattattaattaactgttacatatttaatataaaaaac 1203710  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 174  Q
    |||| |||| | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||    
T  1203711 acaagtttttaatcaaaattactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctat 1203784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 14816294 - 14816126
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| ||||| |||| || |||||||||||| ||| |    
T  14816294 acatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaata 14816196  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| |||||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||||    
T  14816195 cacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaac 14816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14829446 - 14829614
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| ||||| |||| || |||||||||||| ||| |    
T  14829446 acatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaata 14829544  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| |||||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||||    
T  14829545 cacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaac 14829614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 35678443 - 35678275
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||||||||| ||||| |||| || |||||||||||| ||| |    
T  35678443 acatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaata 35678345  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||| |||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||    
T  35678344 cacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgataaaaaaac 35678275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 40210989 - 40210835
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||     
T  40210989 acatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaac 40210890  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgca 155  Q
    |||||||  |||||||| |||||| ||||||| ||||| ||   |||||||||||    
T  40210889 acaaattcaaagtcaaagttactaatttaaacgtcttaacatgtgcaaatttgca 40210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 8140593 - 8140714
Alignment:
Q  17 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaa 116  Q
    ||||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||    
T  8140593 acatgttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacataaattttaagtcaa 8140692  T
Q  117 aattactactttaaacttctta 138  Q
    ||||| |||||||| |||||||    
T  8140693 aattattactttaatcttctta 8140714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9801678 - 9801846
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||| |||| ||||  ||| |||||||||||| |||| |||||||| ||||||||||| ||||||||||  ||||||||||||| |||     
T  9801678 acatgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttatatatttaatataacaaac 9801777  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | || ||| |||||||| |||||||||||||||||||| ||   ||||||||||||||||| |||||||    
T  9801778 ataagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgattgaaaaac 9801846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 26682077 - 26682246
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||| ||||| | || |||||||||||||     
T  26682077 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-caacaattatttattaaaaagctacacatttaatataaaat 26682175  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
      |||| ||  |||||||| ||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  26682176 gcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 26682246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 38527830 - 38527974
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaac----aattatttattaaaagttgcatatttaatataaa 96  Q
    ||||||||||||||||||||||||||  ||||||||||| ||| |||| |||||||||||||    | |||||||||||||| | |||||||||||||||    
T  38527830 acatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattatttatttattaaaagctacatatttaatataaa 38527929  T
Q  97 aaatacaaattttaagtcaaaattactactttaaacttcttatca 141  Q
    ||| |||||||  || ||||||||| |||||||||||||||||||    
T  38527930 aaacacaaattccaaatcaaaattattactttaaacttcttatca 38527974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 31812122 - 31812291
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  || | ||||||||| ||||| | |||||||||||| |||      
T  31812122 acatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaatg 31812221  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  ||||||||||||| | |||||||||||||  |   |||||||||||||||||||||||||    
T  31812222 cacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 31812291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 18567553 - 18567410
Alignment:
Q  32 taaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaa 131  Q
    ||||||| |||| |||| |||||||||||||||||||| |||||| ||| |||||||||||||||||| |||  ||  |||||||| |||||| ||||||    
T  18567553 taaaagtggtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaa 18567454  T
Q  132 cttcttatcacaagcaaatttgcacatgatagaaaaactctatt 175  Q
    ||||||| ||   ||||||||||||||||||||||||| |||||    
T  18567453 cttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 18567410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 26834570 - 26834739
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||| ||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||      
T  26834570 acatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatg 26834669  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  ||||||||||||| | |||||| ||||||  | | |||||||||||||||||||||||||    
T  26834670 cacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatgatagaaaaac 26834739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4080562 - 4080395
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaaa 99  Q
    ||||||| ||||||||||||||||||  || |||||||||||| |||| ||||||||| |||||||| ||| ||||| ||  |||||||||||||||       
T  4080562 acatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaatgc 4080463  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4080462 -acaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3306223 - 3306055
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| |  |||||||  |||||| ||| ||||      
T  3306223 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttgatacaaaatg 3306125  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||| ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  3306124 ttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 3306055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4103018 - 4102851
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaaa 99  Q
    ||||||| ||||||||||||||||||  || |||||||||||| |||| ||||||||| |||||||| ||| ||||| ||  |||||||||||||||       
T  4103018 acatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaa--- 4102922  T
Q  100 tacaaa--ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    | ||||  ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4102921 tgcaaaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 39024997 - 39024857
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||   |||||||  |||||||| |||||||||    
T  39024997 aactaaaagtaataactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttactactt 39024899  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||||||   |||||||||||||||||||||||||    
T  39024898 taaacttcttatcatgtgcaaatttgcacatgatagaaaaac 39024857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4084711 - 4084544
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaa 99  Q
    ||||||| ||||||||||||||||||  || |||||||||||| |||| ||||||||| |||||||| ||| | |||| || |||||||||||| |||      
T  4084711 acatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatg 4084613  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     | || ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4084612 cataagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2161397 - 2161565
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||  ||||      
T  2161397 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaattcaaaatg 2161495  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  2161496 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 2161565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 8284738 - 8284563
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgca--tatttaatataaaaa 98  Q
    ||||||||| |||||||||||||||   ||||||||||||||| |||||||| ||||  ||||||||||||||||||    ||  ||||||||||||||     
T  8284738 acatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatttaatataaaat 8284639  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 174  Q
    | |||| ||  ||||| || || ||| ||||||||||||| ||    |||||||||||||||||||||||| ||||    
T  8284638 acacaagttccaagtcgaagttgctaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccctat 8284563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 39703466 - 39703561
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||  || ||||||||||||||    ||||||||| ||||||||||||||||||    
T  39703466 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttaaaaaccaacaattacgggttaaaagttacatatttaatataaaaaa 39703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12131992 - 12132161
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||||||||||||   |||||||||||| || ||||||||||||| | |||| |||||||| |||||||  |||||||||||||||      
T  12131992 acatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaatg 12132091  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| ||||||||||||| |||||| ||   |||| |||||| |||||||||||||    
T  12132092 ttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaac 12132161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 38843713 - 38843882
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  38843713 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatg 38843812  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||   ||||||  || ||||||||||||| ||   |||||||| ||||||||||||||||    
T  38843813 tacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaatttacacatgatagaaaaac 38843882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 44091346 - 44091494
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaa 117  Q
    ||||||| | ||| ||||||| |||||||||||||||||| ||||||||||||||||||   | || |||||||||||||   |||| || ||| |||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaa 44091444  T
Q  118 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
     ||||||||||||| |||||| || | |||||||| ||||||||||||||    
T  44091445 gttactactttaaatttcttaacatatgcaaatttacacatgatagaaaa 44091494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 45516316 - 45516395
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| | ||||||||||||| ||||    
T  45516316 atgttaagataactaaaagtagtaactttttattg-aaactaacaattatttattaaaagctacatatttaatatataaaa 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36967239 - 36967077
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||| ||||||||||| |||||| |||||||| ||||| ||| ||| |||||||||| |||| |||||||  ||||||||||| |||      
T  36967239 acatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttttatatttaatattaaatg 36967140  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgata 162  Q
    | ||| ||| ||  |||| || ||| ||||||||||||| ||   ||||||||||||||||||    
T  36967139 tgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatgata 36967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 12189757 - 12189588
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||  |||||||||||||| | |||||| |||| ||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||      
T  12189757 acatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatg 12189658  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||   ||| || ||| ||||||||||||||||   |||||||||||||||||||||||||    
T  12189657 tacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 12189588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 12434185 - 12434016
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||  |||||||||||||| | |||||| |||| ||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||      
T  12434185 acatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatg 12434086  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||   ||| || ||| ||||||||||||||||   |||||||||||||||||||||||||    
T  12434085 tacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 12434016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26364158 - 26363990
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||||||| |||| |||||||||||| |  |||||||  | | |||||| ||||      
T  26364158 acatgtgcaatattgcacatgttaaggtaactaaaagtagaaagtttttatt-aaaatcaacaattatttaacaaaaagttatacaattaatagaaaatg 26364060  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  26364059 ttcaagttccaatgcaaagttactattttaaatttcttaacatgcgcaaatttgcacatgatagaaaaac 26363990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 9580276 - 9580109
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt---aaaagttgcatatttaatataaaaaa 99  Q
    |||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| |||||||||||||||   |||| ||  ||||||||||| |||      
T  9580276 atgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaaaaatt--atatttaatattaaatg 9580179  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||| ||  ||||||| ||| ||||||||||||| ||   | |||||||||||||||| ||||||    
T  9580178 tacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatgataaaaaaac 9580109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 38213114 - 38212942
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatt-ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    |||||||||| |||||||||||||| | |||||| ||| |||| | |||| ||||||| || |||||||| ||| |||||||  ||||||||||| | |     
T  38213114 acatgtgcaacattgcacatgttaaaacaactaatagtggtaactgtttttttgaaaaacagcaattattcatttaaaagttttatatttaatattacat 38213015  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
     ||||| ||| ||   |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||||    
T  38213014 gtacaagtttcaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 38212942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 29642648 - 29642781
Alignment:
Q  37 gtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat-acaaattttaagtcaaaattactactttaaacttc 135  Q
    ||||||| |||| |||||||| || ||||||||  | ||||||||  ||||||||||||||||  |||| ||| ||| |||| |||| | |||||| | |    
T  29642648 gtagtaacttttcattgaaaaacaccaattattattaaaaagttgtctatttaatataaaaaaacacaagtttcaagacaaacttaccattttaaattcc 29642747  T
Q  136 ttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||| | |||||||||||||||||||||||||    
T  29642748 ttatcatatgcaaatttgcacatgatagaaaaac 29642781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45005979 - 45006072
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 93  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  |||||||||||    
T  45005979 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatat 45006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 20514641 - 20514809
Alignment:
Q  1 acatgtgcaa-tattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    |||||||||| ||||||||||| |||   |||| ||||||||||||| ||||||||||  | |||||||||||| |||||||  |||||||||||||||     
T  20514641 acatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatttaatataaaat 20514740  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
     ||||| ||  ||| |||| |||| | |||||| |||||| |    |||||| ||||||||||||||||    
T  20514741 gtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatgatagaaaa 20514809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33514669 - 33514593
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||||||||||||||  |||||||||||| ||  |||||||||||| ||||||  |||||||||||    
T  33514669 acatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaaacaacaaccatttattaaaa 33514593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 28015025 - 28014858
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||| || |||| ||||| |||||| |  | ||||| ||||| || |||  ||||||||||||||| |||||||  ||||||||||| |||      
T  28015025 acatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa--caacaattatttattcaaaagttttatatttaatattaaatg 28014928  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  28014927 tacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 28014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 45519658 - 45519564
Alignment:
Q  73 taaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||||| | |||||||||||||||||| |||| ||  |||| ||| |||||||||||||||||||||||   |||||||||  ||||||||||||    
T  45519658 taaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttatcatgtgcaaatttgtgcatgatagaaaa 45519564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7750677 - 7750734
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 58  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||    
T  7750677 acatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaac 7750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 37264521 - 37264586
Alignment:
Q  12 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||| | ||||||||||||||| || |||||||||| ||| |||||||||||||||    
T  37264521 attgcacatgttaaaacaactaaaagtagtaaattgttattgaaaatcaataattatttattaaaa 37264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 5573312 - 5573464
Alignment:
Q  16 cacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtc 114  Q
    |||||||||| |||||||||| ||  || ||||||||||||| ||||||| ||||||||||| |||  |||| ||||| ||||  || || || |||  |    
T  5573312 cacatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaagtt--atatataatacaaaatgtataagttctaatgc 5573409  T
Q  115 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| || || ||||||||||||| ||    ||||||||||||||||||||||||    
T  5573410 aaaagtattattttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 5573464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 16445886 - 16445732
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaa 117  Q
    ||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||  ||| | ||  ||  ||||    
T  16445886 atgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtac-agttccaatacaaa 16445788  T
Q  118 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactcta 173  Q
    ||| ||| |||||||||||||  |   |||||||||||||| ||||||||||||||    
T  16445787 atttctattttaaacttcttaatatgtgcaaatttgcacataatagaaaaactcta 16445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34249686 - 34249784
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt--aaaagttgcatatttaatataaaa 97  Q
    ||||||||||| ||| ||||| ||||| | ||||||||| |||||||| |||||||| ||  |||||||||||  |||||||  |||||||||||||||    
T  34249686 acatgtgcaatgttgtacatgataagacagctaaaagtattaatttttcattgaaaaacactaattatttattaaaaaagttaaatatttaatataaaa 34249784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 34869691 - 34869560
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||||| |||||| | |||||| | |||||| ||||| || |||| ||||||||||||||| |||||||  ||||||| ||| ||||     
T  34869691 acatgtgcaacattgcacgtgttaaaacaactaataatagtaactttttcttcaaaaacaacaattatttattcaaaagttttatatttattattaaaag 34869592  T
Q  100 tacaaattttaagtcaaaattactactttaaa 131  Q
    || |||||| ||  ||||||| ||| ||||||    
T  34869591 tataaatttcaatacaaaatttctattttaaa 34869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 35741016 - 35740957
Alignment:
Q  82 catatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatca 141  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||| || ||||||    
T  35741016 catatttaatataaaaaacacaaatttttagtcaaaattactacattaaaatttttatca 35740957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 40226112 - 40225985
Alignment:
Q  45 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 143  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  40226112 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 40226013  T
Q  144 agcaaatttgcacatgatagaaaaactc 171  Q
     |||||||||||||||||||||||||||    
T  40226012 tgcaaatttgcacatgatagaaaaactc 40225985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1844730 - 1844632
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattt-tttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    |||||| |||||||||||| ||| | | |||||||||||| ||||| |||||| ||||  |||||||||||||| |||||||  |||||||||||||||    
T  1844730 acatgtacaatattgcacacgttgaaacaactaaaagtagaaatttctttattaaaaagtaacaattatttattaaaaagttaaatatttaatataaaa 1844632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27874848 - 27874681
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||| || |||| ||||| |||||| |  | ||||| ||||| || |||  ||||||||||||||| |||||||  ||||||||||| |||      
T  27874848 acatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa--caacaattatttattcaaaagttttatatttaatattaaatg 27874751  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  |||||||  || ||||||||||||| ||   |||||||||||||||||||||||||    
T  27874750 tacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 27874681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 31451420 - 31451502
Alignment:
Q  87 ttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||||| |||| ||| |||| ||| |||||||||||||||||||| |||  ||||||||   ||||||||||||||    
T  31451420 ttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacacgtgcaaatttatccatgatagaaaaac 31451502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6818026 - 6818195
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||| | |||||||   |||||||| |||||| |||  ||||||||  |||||||||||||| |||||||  ||| |||||||||||      
T  6818026 acatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatg 6818125  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||   |  |||  |||||| ||||||||||||| ||    ||||||||||||||||||||||||    
T  6818126 cacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 6818195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12346015 - 12346087
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| ||| |||||||||| | || ||| |||||||| ||||| ||||||| |||||||||||||||    
T  12346015 acatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaaacaacaattatttatt 12346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32186195 - 32186363
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||| |||| |||||| ||||||| | |||||| |||||||| ||||| ||  ||| ||||| |||| |||| |||||||  ||||||||||| |||      
T  32186195 acatgagcaacattgcaaatgttaaaacaactaatagtagtaactttttcttagaaaacaacatttatatattcaaaagttttatatttaatattaaatg 32186294  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |  |||||| ||   |||||| ||| ||||||||| ||| || | ||||||||||||| ||||||||||    
T  32186295 tgtaaatttcaatataaaatttctattttaaacttattaacatatgcaaatttgcacacgatagaaaaa 32186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 6850737 - 6850674
Alignment:
Q  10 atattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    ||||||||||||  || | |||||| |||||||| ||||||||||||| |||||||||||||||    
T  6850737 atattgcacatgacaaaacaactaatagtagtaactttttattgaaaaacaacaattatttatt 6850674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 14961718 - 14961663
Alignment:
Q  114 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  14961718 caaaattactattttaaacttcttagcatgtgcaaatttgcacatgatagaaaaac 14961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 10974695 - 10974626
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    |||||||||||||||  |||||||||||| ||| || |||||||| |||| || ||||||||||||||||    
T  10974695 aactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatatttaatataaaa 10974626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13496901 - 13496824
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataact-aaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||||||||||   |||| |||| |||||| |||  ||||||||  ||||||||||||||||||    
T  13496901 acatgtgcaatattgcacatgttaaaggaactaaaaaatagtaactttacattgaaaaagaacaattatttattaaaa 13496824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 39430522 - 39430606
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaa--caattatttattaaaagttgcatatttaatataaaaaatacaaattttaa 111  Q
    ||||||||||||||| |||| ||||||||  ||  |||||||||||||||| ||  | ||||||||||||| ||| |||||||||    
T  39430522 aactaaaagtagtaagttttgattgaaaaaaaaaacaattatttattaaaaattatacatttaatataaaatatataaattttaa 39430606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35746057 - 35745982
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaa 76  Q
    ||||||||||||||| |  ||||||  |||||||||| | ||| |||| ||||||||| |||||||||| ||||||    
T  35746057 acatgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattattaattaaa 35745982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40716284 - 40716353
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt-attgaaaaccaacaattattt 70  Q
    |||||||||||||||||||||||||  ||||||||||| | |||||||| ||| | || ||||||||||||    
T  40716284 acatgtgcaatattgcacatgttaatctaactaaaagt-gaaattttttaattaagaaacaacaattattt 40716353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 32195954 - 32195874
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaa 111  Q
    |||||||| || ||||||||||||||||   ||||| |||||||||||| | | ||||||||||||||||   |||||||||||    
T  32195954 aactaaaaataataattttttattgaaa---aacaactatttattaaaatgctacatatttaatataaaatgaacaaattttaa 32195874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33430282 - 33430189
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 93  Q
    |||||| ||| ||||||||| |||| | |||||| |||| ||| ||||| || |||| ||||||||||| ||| |||||||  |||||||||||    
T  33430282 acatgttcaacattgcacatattaaaacaactaatagtaataactttttcttaaaaaacaacaattattaattcaaaagttttatatttaatat 33430189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 45518067 - 45518128
Alignment:
Q  106 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||||||| ||| |||||| |||||||||||||| |    ||||||||||||||||||||||    
T  45518067 ttttaagttaaagttactagtttaaacttcttattatgtacaaatttgcacatgatagaaaa 45518128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 7489654 - 7489778
Alignment:
Q  44 ttttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcac 142  Q
    ||||||||||||||  | |||| | ||||||||| |||  | ||||||||||||| ||| |||||||||  |||| ||| || |||||| |||| | ||     
T  7489654 ttttttattgaaaaatagcaatcaattattaaaaagttatacatttaatataaaatatataaattttaatacaaacttattattttaaaattctaaacat 7489753  T
Q  143 aagcaaatttgcacatgatagaaaa 167  Q
       ||||||||||||||||||||||    
T  7489754 gcacaaatttgcacatgatagaaaa 7489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11923024 - 11923096
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    ||||||||||||||||||| ||||| | |||| ||| |  ||| ||||||||||||| ||  |||||||||||    
T  11923024 acatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaaacactaattatttatt 11923096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 13496757 - 13496709
Alignment:
Q  121 actactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  13496757 actattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 15868101 - 15868053
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||  || ||||||||||||| ||||||||| |||||||||    
T  15868101 aactaaaagtaacaactttttattgaaaaacaacaattacttattaaaa 15868053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 29912172 - 29912132
Alignment:
Q  101 acaaattttaagtcaaaattactactttaaacttcttatca 141  Q
    ||||||||||||  |||||| ||||||||||||||||||||    
T  29912172 acaaattttaagataaaatttctactttaaacttcttatca 29912132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2795533 - 2795701
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||     
T  2795533 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaac 2795632  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  2795633 acaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 2795701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 31366120 - 31365947
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa--ttttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaa 98  Q
    |||||||||||||||||||||||||| || ||||| |||||||  |||||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  31366120 acatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaa 31366021  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
    | |||| ||  |||||||| |||||| ||||||||||||| ||    |||||||||||||||||||||||||||    
T  31366020 acacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaactct 31365947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 15190882 - 15191050
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatat-aaaaaa 99  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||| ||||||    
T  15190882 acatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaagttacatatttaatataaaaaaa 15190981  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||| ||||||||||||||||||||||||||||| ||   ||||||||  |||||||| |||||    
T  15190982 cacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaatttatacatgataaaaaaa 15191050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 34578021 - 34578188
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||||| | |||||||||||||||||||    
T  34578021 acatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaagctacatatttaatataaaaaat 34578120  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||| |||||||| ||| |||||| ||||||||| ||| ||   |||||||||||||||||| |||||    
T  34578121 acaagttttaagttaaagttactattttaaactttttaacatgtgcaaatttgcacatgataaaaaaa 34578188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 4047429 - 4047590
Alignment:
Q  8 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatt 107  Q
    |||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||||| | |||||||||||||||||| |||| ||    
T  4047429 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtt 4047528  T
Q  108 ttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
      |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  4047529 ccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 4047590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30328495 - 30328358
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||| | ||||||||||||||||||     
T  30328495 acatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 30328396  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||| ||  |||| ||| ||||||||||||||||||||    
T  30328395 acaagttccaagttaaagttactactttaaacttctta 30328358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 8103748 - 8103572
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||      
T  8103748 acatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatg 8103650  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattat 177  Q
     |||| ||  |||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||    
T  8103649 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctattat 8103572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 11636741 - 11636909
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||||||||| ||||||||| ||  |||||||||||||||       
T  11636741 acatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaatgc 11636840  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||| |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  11636841 -acaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 11636909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 11375972 - 11376140
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatac- 102  Q
    ||||||||||||||||||||||   ||||||||||||||| |||| |||||||| ||| |||||||||||||||| | |||||||||||||||||| ||     
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaagctacatatttaatataaaaaacaca 11376071  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    |||||| |||||||| |||||||||||||||| ||||||     |||||| ||||||||||||||||||    
T  11376072 aaatttcaagtcaaagttactactttaaactttttatcatgtataaatttacacatgatagaaaaactc 11376140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12642161 - 12641991
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||||||||||||   ||||| ||| ||||||||||||||||||     
T  12642161 acatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaatgttacatatttaatataaaaaac 12642062  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    |||| ||  || ||||| ||| || ||||||||||||| ||   |||||||||||||| ||||||||||||    
T  12642061 acaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcacattatagaaaaactc 12641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 28629890 - 28630056
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatac 102  Q
    |||| ||||||||||||||||||   |||||||| || ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacac 28629989  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcac-atgatagaaaaa 168  Q
    || | | |||| |||  || |||||||||||||||||||   |||||||||||| ||||||||||||    
T  28629990 aagtctcaagttaaagatattactttaaacttcttatcatgtgcaaatttgcacgatgatagaaaaa 28630056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9184217 - 9184354
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||| |||||||  | ||||||||||||||||||     
T  9184217 acatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaactacatatttaatataaaaaac 9184316  T
Q  101 acaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||| ||  |||| ||| ||||||||||||||||||||    
T  9184317 acaagttccaagttaaagttactactttaaacttctta 9184354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 41350244 - 41350379
Alignment:
Q  33 aaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaac 132  Q
    ||||||| |||||||  | |||||| |||||||||||||||||||||| |||||||||||||||||  |||| ||  |||||||||||||||||||||||    
T  41350244 aaaagtattaattttgcactgaaaatcaacaattatttattaaaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaac 41350343  T
Q  133 ttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||||| ||   |||||||||||||||||| |||||    
T  41350344 ttcttaacatgtgcaaatttgcacatgataaaaaaa 41350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18841874 - 18841705
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  18841874 acatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaatg 18841775  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||| ||  ||||||| ||| ||||||||| ||| || | ||||||||||||| |||| ||||||    
T  18841774 tacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacacgataaaaaaac 18841705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30839791 - 30839959
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  30839791 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 30839889  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  30839890 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 30839959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36597589 - 36597757
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  36597589 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 36597687  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  36597688 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 36597757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 3398229 - 3398398
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | | ||||||||| |||||||||  ||||||||||| |||      
T  3398229 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatg 3398328  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  3398329 tacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3398398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24329803 - 24329670
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||| ||||| ||||||| ||||||| | | ||||||||||||||      
T  24329803 acatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatg 24329705  T
Q  100 tacaaattttaagtcaaaattactactttaaactt 134  Q
    ||||| ||  |||||||| |||| |||||||||||    
T  24329704 tacaagttccaagtcaaagttaccactttaaactt 24329670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5958292 - 5958196
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaa 96  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||| |||||||| ||||||||| ||||| |||| || |||||||||||||||    
T  5958292 acatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatatttaatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 16174762 - 16174623
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag-ttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||  || |||||||||||||||    |||| ||| || ||||| |||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatataaatgc-acaagtttcaattcaaagttactactt 16174664  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||| ||||||| |   ||||||||||| ||||||||||||    
T  16174663 taaatttcttatgatgtgcaaatttgcaaatgatagaaaaa 16174623  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40512961 - 40513126
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||| |||||||||||| |  |||||||  |||||| ||| |||| |    
T  40512961 acatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattg-aaatcaacaattatttaacaaaaagttatatatttgatacaaaata 40513059  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaa 166  Q
    | ||||||  ||  |||| |||||| |||||| || ||| ||   ||||||||| ||||||||||||    
T  40513060 ttcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtacatgatagaaa 40513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 14466598 - 14466495
Alignment:
Q  65 ttatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgataga 164  Q
    ||||| |||||||| | |||||||||||||||||| |||| ||| |||| ||| |||||||||||||||||||| ||     ||||||||||||||||||    
T  14466598 ttattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtctaaatttgcacatgataga 14466499  T
Q  165 aaaa 168  Q
    ||||    
T  14466498 aaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 31567633 - 31567493
Alignment:
Q  28 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactact 126  Q
    |||||||||  ||||| ||||||||||||| ||| ||||||| |||||||   | ||||||||||||||||   |||||||| ||| ||||||||| | |    
T  31567633 taactaaaaagagtaactttttattgaaaaacaataattattcattaaaaaactacatatttaatataaaatgaacaaatttcaagacaaaattaccatt 31567534  T
Q  127 ttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    ||||| || ||| ||   ||||||||||| |||||||||||    
T  31567533 ttaaattttttaacatgtgcaaatttgcatatgatagaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 6863584 - 6863734
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaatacaaattttaagtcaaa 117  Q
    |||||||| ||||||||||||| || ||||||||| |||||||||||||||| || |||||||  |||||||||| ||||  | ||| ||  ||   |||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaa 6863682  T
Q  118 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||||| |||||| || ||| ||   |||||||||||||||||||||||||    
T  6863683 gttactattttaaattttttaacatgtgcaaatttgcacatgatagaaaaac 6863734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 18150454 - 18150561
Alignment:
Q  33 aaaagtagtaat-tttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaa 130  Q
    |||||||||||  ||||||||||| | || |||||||||||||||| |||  |||||||||| |||| |||||| || |||  ||||||||||| |||||    
T  18150454 aaaagtagtaaagtttttattgaataacaccaattatttattaaaatgttatatatttaatacaaaatatacaagttctaacgcaaaattactattttaa 18150553  T
Q  131 acttctta 138  Q
    ||||||||    
T  18150554 acttctta 18150561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 30893744 - 30893805
Alignment:
Q  106 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||||||||||| |||||| ||||||||||||| ||   |||||||||||||||||||||||    
T  30893744 ttttaagtcaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 32020153 - 32019982
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa--gttgcatatttaatataaaaa 98  Q
    |||||||||||||||||| |||||||  |||||||  |||||| ||||  ||||||| || | |||||| |||||||  |||   ||||||||||| ||     
T  32020153 acatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattatt-attaaaaaagttatctatttaatatagaat 32020055  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    | |||| ||  ||| |||| |||| | |||||| |||||| ||   |||||||||||||||||||||||||||    
T  32020054 acacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaactc 32019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10665133 - 10665077
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    ||||||| |||||||||||||||||| |||||||||||| ||| |||| ||||||||    
T  10665133 acatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa 10665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33072686 - 33072785
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagta--attttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    |||||||||||||||||||||||||   ||||||||||||||   |||||||||||||  || |||||||||||| ||||| |  |||||||| ||||||    
T  33072686 acatgtgcaatattgcacatgttaaatcaactaaaagtagtacttttttttattgaaagacatcaattatttattgaaaagctatatatttaacataaaa 33072785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 3738042 - 3737952
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 93  Q
    |||||||| |||||||||||||| | |||||| |||||||| ||||| | | ||| ||||||||||||||| |||||||  |||||||||||    
T  3738042 atgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt-tcggaaaacaacaattatttattcaaaagttttatatttaatat 3737952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11360195 - 11360265
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattattt 70  Q
    |||||| ||||||| |||||||||| | ||||||||||||||| ||||||||| |||| ||| ||||||||    
T  11360195 acatgttcaatattacacatgttaaaacaactaaaagtagtaatttttttattaaaaaacaataattattt 11360265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11692800 - 11692758
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa 43  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  11692800 acatgtacaatattgcacatgttaaaataactaaaagtagtaa 11692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 38994213 - 38994136
Alignment:
Q  32 taaaagtagtaatttttta-ttgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattt 108  Q
    ||||| ||| ||||||||| ||||||   |||||||||||||||||||||  ||||||| ||||||| ||||||||||    
T  38994213 taaaaatagcaattttttaattgaaatataacaattatttattaaaagttatatatttactataaaatatacaaattt 38994136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26376738 - 26376666
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| |||| ||||||||| | || ||| |||||||| ||||| ||| ||| |||||||||||||||    
T  26376738 acatgtgcaacattgtacatgttaaaacaaataatagtagtaactttttcttggaaaacaacaattatttatt 26376666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 26265162 - 26265075
Alignment:
Q  52 tgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctta 138  Q
    |||||| ||||||||||||||| |||||||  ||||||||||| ||| |||||| ||| ||  ||||| | ||| |||||||||||||    
T  26265162 tgaaaaacaacaattatttatttaaaagttttatatttaatattaaatatacaagtttcaatacaaaacttctattttaaacttctta 26265075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 29538768 - 29538827
Alignment:
Q  32 taaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaat 91  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||||||| |  |||||||||    
T  29538768 taaaagaagtaacttttcattaaaaaccaacaattatttattaaaagctatatatttaat 29538827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11250125 - 11250056
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||||||||||||||||   |||||||||||| ||  ||||| ||| || |||||||||||||    
T  11250125 acatgtgcaatattgcacatgttaaagcaactaaaagtagcaa-gttttaatgataaacaacaattattta 11250056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 15820274 - 15820312
Alignment:
Q  40 gtaattttttattgaaaaccaacaattatttattaaaag 78  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  15820274 gtaattttttattgaaaaacaataattatttattaaaag 15820312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35469562 - 35469660
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaat-tatttattaaaagttgcatatttaatataaaa 97  Q
    ||||||| | || ||||||||||||  ||||||||||||| || |||||||||||||| |||||||  ||| |  |||||||  |||||||||||||||    
T  35469562 acatgtgaattagtgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttatatatttaatataaaa 35469660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24014856 - 24014799
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 58  Q
    |||||||||| |||||||||||||| | |||||||||||  || |||||||| |||||    
T  24014856 acatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaac 24014799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32282875 - 32282819
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    ||||||| ||||||| |||| |||| |||| |||||||| ||| |||||||||||||    
T  32282875 acatgtgtaatattgtacatattaaaataattaaaagtaataaatttttattgaaaa 32282819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23553579 - 23553747
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatttt-ttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||  | ||||||||||||||||||    
T  23553579 acatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaa 23553678  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||||||||||||| ||| |||||||||||||||| ||| ||   ||||||||||||||||||||||||    
T  23553679 tacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 23553747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 7349702 - 7349866
Alignment:
Q  5 gtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaa 104  Q
    ||||||||||||||||||||||  ||||||||||| ||| |||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  7349702 gtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaacacaa 7349801  T
Q  105 attttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||||||||||| |||||||||||||||||||||||    ||||||| ||||||||||||||||    
T  7349802 gttttaagtcaaagttactactttaaacttcttatcatgtacaaatttacacatgatagaaaaac 7349866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 29190982 - 29190816
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatac 102  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||| ||    
T  29190982 atgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttgcatatttaatattaaaaacac 29190883  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    || ||  |||||||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  29190882 aagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 29190816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 10813658 - 10813494
Alignment:
Q  6 tgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatattt-aatataaaaaatacaa 104  Q
    |||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||| ||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaagttacatattttaatttaaaaaacacaa 10813559  T
Q  105 attttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||||| |||||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  10813558 attttaagtcaaagttactactttaaacttattatcatatgcaaatctgcacatgatagaaaaac 10813494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 4329635 - 4329772
Alignment:
Q  32 taaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaa 131  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||| | |||||| |||||||| |||||||||||||    
T  4329635 taaaagtagtaatttttaattgaaaaccaacgattattgattaaaagttacatatttaatataaaaaacataaatttcaagtcaaagttactactttaaa 4329734  T
Q  132 cttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||| ||| || | |||||||||||||||||||||||||    
T  4329735 ctttttaacatatgcaaatttgcacatgatagaaaaac 4329772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 53961350 - 53961503
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaa 118  Q
    |||||||  ||||||||||||||||||||| |||||||| |||||||||||  ||||| ||| |||||||||||||||||| |||||||| |||||||||    
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaatgttacatatttaatataaaaaacacaaatttcaagtcaaaa 53961449  T
Q  119 ttactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
    |||||| ||||||||||||| ||   ||||||||||||| ||||||||||||||    
T  53961450 ttactaatttaaacttcttaacatgtgcaaatttgcacacgatagaaaaactct 53961503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 41415697 - 41415557
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactacttt 128  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||| | |||||||||||||||||| |||||||| |||||||| ||||||||||    
T  41415697 aactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaagctacatatttaatataaaaaacacaaatttcaagtcaaagttactacttt 41415598  T
Q  129 aaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||| ||||||   |||||||||||||||||| ||||||    
T  41415597 aaacttattatcatgtgcaaatttgcacatgatataaaaac 41415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 36000108 - 35999947
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||     
T  36000108 acatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 36000009  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||       |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  36000008 ac-------aagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 35999947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16667553 - 16667385
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||| |||||||| ||||| ||||||||| ||||| | |||||||||||||||| |    
T  16667553 acatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaata 16667454  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||| |||| |||||||  | ||||||||||||| ||   ||||||||||||||||||||||||    
T  16667453 cacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 27362406 - 27362575
Alignment:
Q  7 gcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaa 105  Q
    |||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||| | |||||||| |||| | | |||||||||||| |||   |||||    
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaa 27362505  T
Q  106 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 175  Q
    ||  ||||||||||||| ||||||||||||||| ||   ||||||||||||||||||||||||| |||||    
T  27362506 ttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 27362575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 48910943 - 48910803
Alignment:
Q  28 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||| | ||||||||| |||||||| |||||||   ||| ||| |||||||||    
T  48910943 taactaaaagtagtaattttttattgaaaattaacaattattgattaaaagctacatatttaacataaaaaacacaaattcctagttaaagttactactt 48910844  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||||||||| || | ||||||||||| ||||||||||||    
T  48910843 taaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10389436 - 10389269
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||| |||||||||   |||||||||||| ||| |||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||     
T  10389436 acatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagttacatatttcatataaaaaac 10389337  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    |||| || ||||||||||||||||||| ||| || ||| ||   |||||||| ||||| ||| |||||    
T  10389336 acaagttctaagtcaaaattactacttgaaattttttaacatgtgcaaatttacacattataaaaaaa 10389269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 54495806 - 54495637
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||| | ||||||||| ||||| | |||||||||||| |||      
T  54495806 acatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatg 54495707  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||| ||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  54495706 cacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 54495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 23051490 - 23051382
Alignment:
Q  61 acaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatga 160  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||    
T  23051490 acaattatttattaaaagttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatga 23051391  T
Q  161 tagaaaaac 169  Q
    |||||||||    
T  23051390 tagaaaaac 23051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23545485 - 23545657
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||||||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||      
T  23545485 acatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatg 23545584  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
    ||||| ||  ||  |||||||  || ||||||||| ||| ||   ||||||||||||||||||||||||||||    
T  23545585 tacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatgatagaaaaactct 23545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 27019272 - 27019438
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 102  Q
    ||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||  |||    
T  27019272 tgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtac 27019371  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    || ||| ||  ||||||| ||| ||||||||| ||| || | |||||||||||||||||||||||||    
T  27019372 aagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatgatagaaaaac 27019438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19468203 - 19468372
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  19468203 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatg 19468302  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||| ||  ||||||| ||| ||||||||||||| ||   |||||||||||||| ||||||||||    
T  19468303 tacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 19468372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34941287 - 34941456
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||| |||||||||||| ||||| ||||||||||||  || ||||||||||||| |||||| |||||||| |||||||  ||||| |||| ||||      
T  34941287 acatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatattaaatacaaaatg 34941386  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  ||||||||||| ||||||||||||||||   ||||||| |||||||||||||||||    
T  34941387 tacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatgatagaaaaac 34941456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 47327058 - 47326890
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 102  Q
    ||||||| |||||||||||||||| | |||||||||||||||||| |||||||| ||| | ||||||||| ||||  | |||||||||||| |||   |     
T  47327058 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47326959  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    || ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||    
T  47326958 aagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 47326890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 47341854 - 47341686
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 102  Q
    ||||||| |||||||||||||||| | |||||||||||||||||| |||||||| ||| | ||||||||| ||||  | |||||||||||| |||   |     
T  47341854 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47341755  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    || ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||    
T  47341754 aagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 47341686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 49181083 - 49181250
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaata 101  Q
    ||||||||||||||||||||||||  |||||||||||| ||  ||| |||||||| ||||||| ||||||| ||||||| ||||||||||||||||   |    
T  49181083 atgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgca 49181182  T
Q  102 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||| ||  ||  |||| |||||| ||| ||||||||| ||   |||||||||||||||||||||||||    
T  49181183 caagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaac 49181250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 52391309 - 52391475
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaata 101  Q
    ||||| ||| ||||||||||||| |||||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||  ||    
T  52391309 atgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgta 52391408  T
Q  102 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||| |||||||||||||||    
T  52391409 caagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8736979 - 8736811
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||||| ||||||| |||||||||||| |||      
T  8736979 acatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatg 8736880  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     || | ||  |||||||| |||| |||||||| |||||| ||   |||||||| |||| |||||||||||    
T  8736879 cac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaatttacacacgatagaaaaac 8736811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17409833 - 17410002
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||      
T  17409833 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatg 17409932  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  |||| || ||| ||||||||||||||||   |||||||||||||||||||||||||    
T  17409933 tacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 17410002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 19451069 - 19450900
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||      
T  19451069 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatg 19450970  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||| ||||||||||    
T  19450969 tacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 19450900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 50352312 - 50352480
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  50352312 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 50352410  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  ||||||||||| |||||| |||||| ||   ||||||||||| |||||||||||||    
T  50352411 ttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcatatgatagaaaaac 50352480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49228366 - 49228457
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaata 92  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||| ||| |||||||||||    
T  49228366 acatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaatgttacatatttaata 49228457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9759310 - 9759142
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  9759310 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 9759212  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   ||||||||| |||||||||||||||    
T  9759211 ttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatgatagaaaaac 9759142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 39876844 - 39877008
Alignment:
Q  5 gtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaataca 103  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| |  |||||||  |||||| ||| ||||  | ||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttgatacaaaatgttca 39876942  T
Q  104 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||  ||  |||| |||||| |||||| |||||| ||   |||||||| ||||||||||||||||    
T  39876943 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttacacatgatagaaaaac 39877008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 24684845 - 24685012
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 98  Q
    |||| ||||| ||| |||||||||| | |||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  24684845 acatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 24684944  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaa 166  Q
     ||||| ||  ||  ||||||| ||| ||||||||||||| ||   ||||||||||||||||||||||    
T  24684945 gtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40049568 - 40049736
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||||| | |||||||||||||||| |  |||| ||  |||||||||| ||||      
T  40049568 acatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatag-aaaccaacaattatttaacaaaaaattatatatttaataaaaaatg 40049666  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |  || ||  ||  ||||||||||| |||||| |||||| ||   |||||||||||||| ||||||||||    
T  40049667 ttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcacataatagaaaaac 40049736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 49650223 - 49650318
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||| ||| ||||| |||||||||| | |||| ||| ||| ||||||||||||||    
T  49650223 tgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattattgaataaatgttacatgtttaatataaaaaa 49650318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10658612 - 10658543
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||    
T  10658612 acatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattta 10658543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10872757 - 10872688
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||    
T  10872757 acatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattta 10872688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 2096880 - 2096977
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    ||||||||||||||||||| |||||   ||||||||||   || ||||||||||||| ||||||||||||||| |||||||  |||||||||||||||    
T  2096880 acatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaa 2096977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33632371 - 33632203
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||  |||||| || | |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||      
T  33632371 acatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatg 33632272  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||| || |  ||||| ||| ||||||||| ||| ||   ||||||| |||||||||||||||||    
T  33632271 tacaagtttcaa-tataaatttctattttaaactttttaacatgtgcaaattcgcacatgatagaaaaac 33632203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6875510 - 6875621
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||| |||||||||||||||||||| | |||||||| ||||||| |||||||| |||  | |||||||||||| |||||||  | ||||||||||||| |    
T  6875510 acatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaatataaaata 6875609  T
Q  100 tacaaattttaa 111  Q
     |||| ||||||    
T  6875610 cacaagttttaa 6875621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 49228754 - 49228832
Alignment:
Q  91 tataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||| |||| ||  |||||||| |||||| ||||||||||||| |||  |||||||||||||||||||||||||    
T  49228754 tataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaac 49228832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 27756574 - 27756739
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaataca 103  Q
    |||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   ||||||||||| || |||||    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatttaatatagaatataca 27756673  T
Q  104 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||| |||| || |||||||||| |||||| ||   | ||||||| |||||||| ||||||    
T  27756674 agtttcaagacaaacttgctactttaaatttcttaacatttgtaaatttgtacatgataaaaaaac 27756739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 4779561 - 4779434
Alignment:
Q  45 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 143  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  4779561 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 4779462  T
Q  144 agcaaatttgcacatgatagaaaaactc 171  Q
     |||||||||||||||||||||||||||    
T  4779461 tgcaaatttgcacatgatagaaaaactc 4779434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 51691353 - 51691519
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaata 101  Q
    |||||||| ||||||||||||||   |||||||| |||||| | |||||||||||| || ||||||||||||||| | |  |||||||||  |||| |||    
T  51691353 atgtgcaacattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaattcaaaatata 51691451  T
Q  102 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||| ||  ||  |||| |||||| || ||| |||||| ||   |||||||| ||||||||||||||||    
T  51691452 caagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaac 51691519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 16069341 - 16069207
Alignment:
Q  36 agtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaactt 134  Q
    |||||||||||||||||||||| |||||||||||||||||||   |  ||||||||||| |||  ||||||||| ||  ||||| | ||| || ||||||    
T  16069341 agtagtaattttttattgaaaaacaacaattatttattaaaaaaatttatatttaatattaaatgtacaaatttcaatacaaaaattctatttaaaactt 16069242  T
Q  135 cttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||| ||   ||||||||||| |||| ||| ||||    
T  16069241 cttaacatgtgcaaatttgcatatgacagataaac 16069207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 25843328 - 25843472
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa--gttgcatatttaatataaaaaatacaaa--ttttaagtcaaaattacta 124  Q
    ||||||||||||||| ||||||||||||| ||||||  |||| ||||||   ||  |||||||||||||||   |||||  || |||| |||| ||||||    
T  25843328 aactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagcttatatatttaatataaaatgcacaaaagttctaagacaaagttacta 25843427  T
Q  125 ctttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||||| ||| ||    ||||||||||| ||||||||||||    
T  25843428 ctttaaactttttaacatctacaaatttgcacgtgatagaaaaac 25843472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 39539473 - 39539607
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||| |||| |||||||||| ||||| | |||||  ||||||||||| |||||||| ||||| ||||||||| ||||| | |||||||||||| |||      
T  39539473 acatgcgcaacattgcacatgctaagacatctaaacttagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatatgaaatt 39539572  T
Q  100 tacaaattttaagtcaaaattactactttaaactt 134  Q
     |||| ||| |||||| | |||| | |||||||||    
T  39539573 cacaagtttcaagtcatagttaccattttaaactt 39539607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 40681960 - 40682014
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 57  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaa 40682014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48911003 - 48910965
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagta 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48911003 acatgtgcaatattgcacatgttaagataactaaaagta 48910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 55813920 - 55814041
Alignment:
Q  48 ttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagc 146  Q
    |||||||||| ||||||||||||||| |||||||  |||||||||| | ||  ||||||||| ||  |||||||| || ||||||||| ||| ||   ||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagttatatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtgc 55814019  T
Q  147 aaatttgcacatgatagaaaaa 168  Q
    ||||||||| |||||| |||||    
T  55814020 aaatttgcatatgatacaaaaa 55814041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3085361 - 3085433
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| |||||||||||||| | || ||| |||||||||||||| |||||||  ||||||||| ||||    
T  3085361 acatgtgcaacattgcacatgttaaaacaattaatagtagtaattttttcttgaaaaataacaattatatatt 3085433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 24297392 - 24297492
Alignment:
Q  12 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaatttta 110  Q
    |||||| ||||||| | || ||| |||||||||||||| ||||||| ||||||||||||| |||||||||  ||||| | ||| |||  |||||||||||    
T  24297392 attgcatatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttatttaaaagttttatattaattattaaatgtacaaatttta 24297491  T
Q  111 a 111  Q
    |    
T  24297492 a 24297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24993625 - 24993549
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||||||||||   ||||||||  |   ||||||||||||||| ||||||| |||||||||||    
T  24993625 acatgtgcaatattgcacatgttaaatgaactaaaaaaaacgattttttattgaaaaacaacaatcatttattaaaa 24993549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49332342 - 49332418
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||| ||||||||||| ||| |||||||| ||| |||| ||||||||  |  |||||||||||||||    
T  49332342 acatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaa 49332418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 37433007 - 37432868
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    |||||| |||||||| ||| | ||||||| ||||||||||||| |||||| ||  ||||||| ||| |||  ||||||||| ||  |||||||  || ||    
T  37433007 aactaatagtagtaactttgttttgaaaaacaacaattatttatttaaaaattttatatttagtattaaatgtacaaatttcaatacaaaatttttattt 37432908  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    ||||||||||| || | |||| ||||||| | ||||||||    
T  37432907 taaacttcttaacatatgcaagtttgcacgtaatagaaaa 37432868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 13009913 - 13009848
Alignment:
Q  12 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||| ||||||| | ||||||||||| ||| |||||||||||||| || ||||||||| |||||    
T  13009913 attgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaa 13009848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 23438193 - 23438242
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag 78  Q
    ||||||| ||||||| ||||||||||||| ||||||| ||||||||||||    
T  23438193 aactaaatgtagtaactttttattgaaaaacaacaataatttattaaaag 23438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 37785001 - 37784932
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    |||||||||||| || ||||||||||||| ||| ||| ||||||| ||||||| ||||||||| ||||||    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttacatatttaacataaaa 37784932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19838858 - 19838689
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||| || |||||||||||||| | |||||| |||| ||| ||||| || |||  ||||||||||||||| |||||||  ||||||||||| |||      
T  19838858 acatgtggaacattgcacatgttaaaacaactaatagtaataactttttttttaaa--caacaattatttattcaaaagttttatatttaatattaaatg 19838761  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    ||||| ||  ||  ||||||| ||| |||||||   ||| ||   |||||||| ||||||||| ||||||||    
T  19838760 tacaagttccaatacaaaatttctattttaaacgggttaacatgtgcaaattttcacatgataaaaaaactc 19838689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 36971326 - 36971454
Alignment:
Q  44 ttttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcac 142  Q
    |||||||||||||| ||||||  ||||||| ||||  | ||||||||||||||||   |||| ||| |||  ||| |||||| |||||| |||||| ||     
T  36971326 ttttttattgaaaaacaacaaaaatttatttaaaggctacatatttaatataaaatgaacaagtttcaagataaagttactattttaaatttcttaacat 36971425  T
Q  143 aagcaaatttgcacatgatagaaaaactc 171  Q
      | |||||||||| ||||||||||||||    
T  36971426 gcgtaaatttgcacttgatagaaaaactc 36971454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 38222323 - 38222415
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaatt 120  Q
    |||||||||||  || |||||| |||||| ||||||||||||||| |||| ||  |||||||||||||||   |||||||||||  |||||||    
T  38222323 aactaaaagtaacaaatttttagtgaaaatcaacaattatttattaaaaaattatatatttaatataaaatccacaaattttaatacaaaatt 38222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 18882322 - 18882267
Alignment:
Q  114 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  18882322 caaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 18882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 42480086 - 42480015
Alignment:
Q  6 tgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    ||||||||||||||| ||||   |||||| ||||| ||  |||||||||||| || ||||||||||||||||    
T  42480086 tgcaatattgcacatcttaaagcaactaagagtagcaacattttattgaaaaacatcaattatttattaaaa 42480015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 35645127 - 35645073
Alignment:
Q  44 ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 97  Q
    ||||||||||||||  |||||||||||||| |||||||  |||||||||||||||    
T  35645127 ttttttattgaaaaataacaattatttattaaaaagttatatatttaatataaaa 35645073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 49250502 - 49250444
Alignment:
Q  2 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaacca 60  Q
    |||||||||||||||||||||||| |  |||||||| || || |||||||| |||||||    
T  49250502 catgtgcaatattgcacatgttaataatactaaaagaagcaactttttattaaaaacca 49250444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 1378066 - 1378197
Alignment:
Q  39 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||||||| ||||||||||| | |||||||||||||||| |||  ||||||||||| |||  ||||| ||| |||  ||| |||| | |||||| |||||    
T  1378066 agtaatttgttattgaaaac-atcaattatttattaaaatgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttctt 1378164  T
Q  138 atcacaagcaaatttgcacatgatagaaaaactc 171  Q
    | ||   ||||||| |||| ||||||||||||||    
T  1378165 aacatgtgcaaatt-gcacctgatagaaaaactc 1378197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3728258 - 3728315
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaa 57  Q
    |||||| |||||||| ||||||||  | ||||||||||||||| ||||||||||||||    
T  3728258 acatgtacaatattgaacatgttataacaactaaaagtagtaacttttttattgaaaa 3728315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36968297 - 36968338
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagta 42  Q
    |||||||||||||| ||||||||||  |||||||||||||||    
T  36968297 acatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13095 - 13263
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||| | ||||||||||||||||||     
T  13095 acatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaac 13194  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||  || | ||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  13195 acaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 10887038 - 10887210
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||||||| |    
T  10887038 acatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaata 10887137  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 172  Q
     |||| ||  || |||||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||    
T  10887138 cacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactct 10887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 31069738 - 31069583
Alignment:
Q  13 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaag 112  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| |||| ||  |||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaag 31069639  T
Q  113 tcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||| |||||| ||||||||||||| ||   | ||||||||||||||||||||||    
T  31069638 tcaaagttactaatttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2830849 - 2830681
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||| || |||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| | ||||||||||||||||||     
T  2830849 acatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 2830750  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||| ||| | ||| ||| || ||||||||||||| ||   ||||||||| |||||||||||||||    
T  2830749 acaaattctaaattaaagttattattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 2830681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 5363061 - 5362925
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||||| | ||||||||||||||||||     
T  5363061 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaac 5362962  T
Q  101 acaaattttaagtcaaaattactactttaaacttctt 137  Q
    |||| ||  |||| ||| |||||||||||||||||||    
T  5362961 acaagttccaagttaaagttactactttaaacttctt 5362925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 22974731 - 22974604
Alignment:
Q  11 tattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatttta 110  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||||| |||||||||||||||||| |||| ||  |    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 22974632  T
Q  111 agtcaaaattactactttaaacttctta 138  Q
    ||| ||| |||||| |||||||||||||    
T  22974631 agttaaagttactattttaaacttctta 22974604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 23813670 - 23813797
Alignment:
Q  11 tattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatttta 110  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||||| |||||||||||||||||| |||| ||  |    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 23813769  T
Q  111 agtcaaaattactactttaaacttctta 138  Q
    ||| ||| |||||| |||||||||||||    
T  23813770 agttaaagttactattttaaacttctta 23813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1017947 - 1017809
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||| |||||||| | | ||||||||||||||||| ||||  ||||||||||||||||||||||| |||| || ||||||||||||||||      
T  1017947 acatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaatg 1017848  T
Q  100 tacaaattttaagtcaaaattactactttaaacttctta 138  Q
     |||| ||| |||||||| ||||||||||||||||||||    
T  1017847 cacaactttcaagtcaaagttactactttaaacttctta 1017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18332857 - 18332688
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| |  ||||||||||| |||      
T  18332857 acatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatatttaatatgaaatg 18332758  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     | || ||  ||||||||||||  ||||||||||||||| ||   | |||||||||||||||||||||||    
T  18332757 cataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatgatagaaaaac 18332688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6016865 - 6017033
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||| ||||| | ||||||||||||| |||| |||||||| ||||| |||||| || |||||||  ||||||||||| |||      
T  6016865 acatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaatg 6016964  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||  |||||||| |||| ||||||||||| ||| ||   ||||||||||||||||||||||||    
T  6016965 cacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 6017033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 8977635 - 8977467
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    ||||||||||||||||||||||||||  |||||||||||| ||  ||| |||||||| ||||||| ||||||| ||||||| ||||||||||||||||      
T  8977635 acatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatg 8977536  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
     |||| ||  ||  |||| |||||| ||| ||||||||| ||   |||||||| |||||||||||||||    
T  8977535 cacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaatttacacatgatagaaaaa 8977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 31568126 - 31568287
Alignment:
Q  5 gtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaataca 103  Q
    |||||||||||||||||||||| |||  || |||||    ||||||||||||| |||||||| |||||| ||||| | |||||||| ||||||||| |||    
T  31568126 gtgcaatattgcacatgttaaggtaatcaagagtagc---tttttattgaaaatcaacaatt-tttattcaaaagctacatatttattataaaaaacaca 31568221  T
Q  104 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| || ||||| |||||||||||||||| ||| ||   |||||||||||||||||||||||||    
T  31568222 agtttcaaatcaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaac 31568287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 28943937 - 28943764
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||| ||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  28943937 acatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 28943839  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 174  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  28943838 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctat 28943764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 14228294 - 14228126
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||| ||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||      
T  14228294 acatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 14228196  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  14228195 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 14228126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34692363 - 34692532
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | | ||||||||| |||||||||  ||||||||||| |||      
T  34692363 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatg 34692462  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  34692463 tacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 34692532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30623335 - 30623473
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| ||| |||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||      
T  30623335 acatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatcaaatg 30623434  T
Q  100 tacaaattttaagtcaaaattactactttaaacttctta 138  Q
    ||||| ||| ||  ||||||| ||| |||||||||||||    
T  30623435 tacaagtttcaatacaaaatttctattttaaacttctta 30623473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 17552755 - 17552587
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||| | |||||||||||||||| |  |||| ||  |||||||||| ||||      
T  17552755 acatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcg-aaaccaacaattatttaacaaaaaattatatatttaatacaaaatg 17552657  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    | ||| ||  ||  || |||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  17552656 ttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 17552587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26602599 - 26602523
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||| | |||||||||||||||| |||||||||    
T  26602599 acatgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaattaattattaaaa 26602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 17596385 - 17596519
Alignment:
Q  35 aagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaact 133  Q
    ||||||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||   |||| ||  || ||||| |||||||||||||||    
T  17596385 aagtagtaactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaact 17596483  T
Q  134 tcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||    ||||||||||||||||||||||||    
T  17596484 tcttatcatgtacaaatttgcacatgatagaaaaac 17596519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 27819796 - 27819627
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaa--ttttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||| ||||   |||||||| || |||  ||||||||||||||||||||   ||||||||||| ||| |||||||| |||||||      
T  27819796 atgtgcaatattgcacatattaaagcaactaaaaatattaacattttttattgaaaaccaacatcaatttattaaaaagttacatatttagtataaaatg 27819697  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     | || ||||||| ||||| ||| | ||||||||||||| ||   ||||||||| |||||||||||||||    
T  27819696 aataagttttaagacaaaaatacaattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 31169929 - 31169763
Alignment:
Q  4 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 102  Q
    |||||||  ||||||||||||||   ||||||| |||||||||||  ||||||||||| ||||| ||||| ||||  | ||||||||||||||||   ||    
T  31169929 tgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcac 31169830  T
Q  103 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    || ||  |||||||| ||||||||||||| || ||| ||   |||||||| ||||||||||||||||    
T  31169829 aagttccaagtcaaagttactactttaaatttgttaacatgtgcaaatttacacatgatagaaaaac 31169763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33017734 - 33017803
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||||||    
T  33017734 acatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttatt-aaaaccaacaattattta 33017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12454075 - 12454132
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 58  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  12454075 acatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaac 12454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 17141315 - 17141451
Alignment:
Q  32 taaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaa 130  Q
    |||||||||| | |||||||| |||| ||||||| ||||||||||| | | ||||||||||||||||    ||| || |||| |||||||||||  ||||    
T  17141315 taaaagtagttactttttattaaaaaacaacaataatttattaaaaagctacatatttaatataaaatgagcaagttctaagacaaaattactatcttaa 17141414  T
Q  131 acttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    || ||||| || | |||||||||||||||||| ||||    
T  17141415 acatcttaacatatgcaaatttgcacatgataaaaaa 17141451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 30591320 - 30591162
Alignment:
Q  13 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaaatacaaattttaa 111  Q
    |||||||||||||   ||||||| ||||||| |||||||||||||   ||||||||||||  |||||||  | |||||||| |||| |||||| ||  ||    
T  30591320 ttgcacatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaa 30591221  T
Q  112 gtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 170  Q
      ||||||||| | || |||||||||| ||   | ||||||||||||||||||||||||    
T  30591220 tgcaaaattaccatttaaaacttcttaacatgtgtaaatttgcacatgatagaaaaact 30591162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 3850577 - 3850654
Alignment:
Q  17 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatata 94  Q
    ||||||||||  |||||||||||| || |||| |||||||| ||| ||||||| |||||||||| |||||||||||||    
T  3850577 acatgttaaggcaactaaaagtagcaacttttcattgaaaatcaataattattcattaaaagttacatatttaatata 3850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 29863471 - 29863302
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||||||||||||||||||   |||||||| |||||| |||  ||||||||  || ||||||||||| |||||||  ||| |||||||||||      
T  29863471 acatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttatagttaatataaaatg 29863372  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     | || ||   |  |||  |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  29863371 caaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 29863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17596322 - 17596370
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt 49  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  17596322 acatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 2086998 - 2086949
Alignment:
Q  7 gcaatattgcacatgttaagataactaaaagtagtaattttttattgaaa 56  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31791085 - 31790917
Alignment:
Q  1 acatgtgcaatattgcacatgtt-aagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaa 98  Q
    ||||||||||||||||||||||| |||  ||||||| ||||||| ||||||||||||| ||  ||||| ||||||||| ||| | ||||||||||| ||     
T  31791085 acatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaaacactaatta-ttattaaaacgtttcctatttaatatagaat 31790987  T
Q  99 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    | | || ||| ||| |||| || | | |||||| ||||||  |   ||||||||||| ||||||||||||    
T  31790986 acataagtttcaagacaaacttgccattttaaatttcttaatatgtgcaaatttgcatatgatagaaaaa 31790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32615631 - 32615540
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaag---tagtaattttttattgaaaaccaacaattatttattaaaagttgcatattta 89  Q
    ||||||| ||||||||| |||||||| ||||||||||   |||||| |||| |||||||| || |||||||| |||||||| | ||||||||    
T  32615631 acatgtgtaatattgcatatgttaaggtaactaaaagtactagtaacttttcattgaaaatcatcaattattgattaaaagctacatattta 32615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 3853062 - 3853121
Alignment:
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    |||||||| ||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  3853062 aagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 3853121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 4371850 - 4372019
Alignment:
Q  3 atgtgcaatattgcacatgttaagataactaaaagtagtaatt-ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaat 100  Q
    |||||||| |||| ||||||||| | |||||| |||| ||||| |||| ||| ||| ||||||||||||||| |||||||  || |||||||| |||  |    
T  4371850 atgtgcaacattgtacatgttaaaacaactaatagtaataattatttttttggaaaacaacaattatttattcaaaagttttatctttaatattaaatgt 4371949  T
Q  101 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
     | || || ||  ||||||| ||| ||||||||||||| ||   | |||||||| ||||||||||||||||    
T  4371950 gc-aagttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcgcatgatagaaaaactc 4372019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24979318 - 24979246
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 73  Q
    |||||||||| |||||||||||||| | |||||| | |||||| ||||| ||||||| | || ||||||||||    
T  24979318 acatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaaacgacgattatttatt 24979246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 31039721 - 31039789
Alignment:
Q  9 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||| ||||||  ||| ||||| |||||| | ||||||||||| ||| |||||||||||||||    
T  31039721 aatattgcacgtgttaaagtaattaaaaatagtaactatttattgaaaaacaaaaattatttattaaaa 31039789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 34300379 - 34300493
Alignment:
Q  8 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaat 106  Q
    ||||||||||||| ||||   || ||||||| |||| |||| || ||||| ||| ||||||||||| ||||| | |||||||||||||||||| ||| ||    
T  34300379 caatattgcacatattaaaccaattaaaagtggtaacttttgat-gaaaatcaataattatttatttaaaagctacatatttaatataaaaaacacatat 34300477  T
Q  107 tttaagtcaaaattac 122  Q
    || || ||||| ||||    
T  34300478 ttcaaatcaaagttac 34300493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1814950 - 1814881
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 71  Q
    |||||||||||||||||||||||||   |||||||||||  |  ||||||||||||| ||| |||||||||    
T  1814950 acatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaa-caataattattta 1814881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 26602513 - 26602480
Alignment:
Q  108 ttaagtcaaaattactactttaaacttcttatca 141  Q
    |||||||||| |||||||||||||||||||||||    
T  26602513 ttaagtcaaagttactactttaaacttcttatca 26602480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 29730318 - 29730383
Alignment:
Q  32 taaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaa 96  Q
    ||||| || ||| ||||||||||||| ||||| ||||||||| |||||||  ||||||||||||||    
T  29730318 taaaattaataagtttttattgaaaaacaacagttatttattaaaaagttatatatttaatataaa 29730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 16540696 - 16540752
Alignment:
Q  83 atatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttat 139  Q
    ||||||||||||||| |||||||||||||   ||| |||| | ||||||||||||||    
T  16540696 atatttaatataaaatatacaaattttaatataaacttacgattttaaacttcttat 16540752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 37283 - 37114
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||      
T  37283 acatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatg 37184  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  |||||||| |||  ||||||||||||||| ||   |||||||||||||||||||||||||    
T  37183 cacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 37114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 41105 - 41170
Alignment:
Q  114 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattatta 179  Q
    |||||||| || ||||||||||||| || |  ||||||| ||||||||||||||||||||||||||    
T  41105 caaaattattattttaaacttcttaacatatacaaatttacacatgatagaaaaactctattatta 41170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 182080 - 182220
Alignment:
Q  28 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 127  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||| || || ||  ||||||||    
T  182080 taaccaaaagtagtaattttttattgaaaacaaacaattatttattaaaagttacatatttaatataaaaaacacaagtttcaaatc-aacgtactactt 182178  T
Q  128 taaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    ||||||||||| ||    ||||||| ||||||||||||||||    
T  182179 taaacttcttaacatgtacaaatttacacatgatagaaaaac 182220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 168
Target Start/End: Original strand, 43479 - 43641
Alignment:
Q  7 gcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaat 106  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||  ||||||||||||||||||| || |    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaattattaattaaaagttatatatttaatataaaaaatataagt 43577  T
Q  107 tttaagtcaaaattactacttt--aaacttcttatcacaagcaaatttgcacatgatagaaaaa 168  Q
    ||||||| ||| ||| | ||||  |||||||||| || |  ||||||||||||||||| |||||    
T  43578 tttaagttaaagttattgctttaaaaacttcttaacatattcaaatttgcacatgataaaaaaa 43641  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 191454 - 191386
Alignment:
Q  29 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 97  Q
    |||||||||| ||||||||| |||||||||   | |||||||||||||| ||  |||||||||||||||    
T  191454 aactaaaagtggtaatttttcattgaaaacatccgattatttattaaaaattatatatttaatataaaa 191386  T

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Target: scaffold0155 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 3572 - 3413
Alignment:
Q  11 tattgcacatgttaagataactaaaagtagtaatttttt-attgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatttt 109  Q
    |||||||||||||||  |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||| | || ||      
T  3572 tattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaagttacatatttaatataaaaaacataagttcc 3473  T
Q  110 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
    || | ||| | ||||||||||||||||||  |   |||||||| ||||||||||||||||    
T  3472 aatttaaagtaactactttaaacttcttaatatgtgcaaatttacacatgatagaaaaac 3413  T

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Target: scaffold0618 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 8564 - 8416
Alignment:
Q  19 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaa 117  Q
    ||||||| | ||| ||||||| |||||||||||||||||| ||||||||||||||||||   | || |||||||||||||   |||| || ||| |||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaa 8466  T
Q  118 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
     ||||||||||||| |||||| || | |||||||| ||||||||||||||    
T  8465 gttactactttaaatttcttaacatatgcaaatttacacatgatagaaaa 8416  T

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Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 94187 - 94016
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 99  Q
    |||| ||||| ||||||||||||||   ||||||||||||||| |||||||||||||| || ||||||||||| ||||  |  |||||||||| ||||      
T  94187 acatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaatacaaaatg 94088  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    || || ||  ||   ||| ||| || || |||||||||| || | |||||||||||||||||||||||||||    
T  94087 tataagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaatttgcacatgatagaaaaactc 94016  T

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Target: scaffold0305 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 18134 - 17994
Alignment:
Q  32 taaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaa 130  Q
    |||||||||||| | || ||| |||| |||||||||||||||| ||||||  |||||||||||||||  ||||||||  ||  ||||  ||||| ||| |    
T  18134 taaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaatgtacaaattccaatacaaacatactattttga 18035  T
Q  131 acttcttatcacaagcaaatttgcacatgatagaaaaactc 171  Q
    || | ||| |||  ||||||||||| |||||||||||||||    
T  18034 acattttaacacgtgcaaatttgcatatgatagaaaaactc 17994  T

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Target: scaffold0149 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22469 - 22549
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaa--gtagtaatttt--ttattgaaaaccaacaattatttattaaaa 77  Q
    |||||||||||||||||||||||||   ||||||||  |||||||||||  |||||||||| || ||||||||||||||||    
T  22469 acatgtgcaatattgcacatgttaaatcaactaaaaaagtagtaattttttttattgaaaaacatcaattatttattaaaa 22549  T

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Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13827 - 13734
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatat 93  Q
    |||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||| | ||||||| |||||||||  |||||||||||    
T  13827 acatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagttttatatttaatat 13734  T

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Target: scaffold0073 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 16703 - 16535
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatat-ttaatataaaaaa 99  Q
    |||| ||||| |||||| |||||||  ||||||||||  | || | ||||||| ||| ||||||||||||||||||| ||  |||| |||||| |||| |    
T  16703 acatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatt-tatatattaatagaaaata 16605  T
Q  100 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 169  Q
     |||| ||  || |||||  || |||||||||||||||| ||   |||||||||||||||||| ||||||    
T  16604 cacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaac 16535  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 1529 - 1445
Alignment:
Q  83 atatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 167  Q
    |||||||||||||||   ||||||||||||  |||||||||  ||||||||||||| ||   |||||||||||||||||| ||||    
T  1529 atatttaatataaaatgaacaaattttaagataaaattactcttttaaacttcttaacatgtgcaaatttgcacatgataaaaaa 1445  T

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Target: scaffold0631 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 451 - 499
Alignment:
Q  1 acatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt 49  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||||    
T  451 acatgtgcaatattgcacatgttaaatcaactaaaagtagtactttttt 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 44431 - 44373
Alignment:
Q  16 cacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaa 76  Q
    |||||||||| | || |||||||||||| |||||||||||||  || ||||||||||||||    
T  44431 cacatgttaaaacaattaaaagtagtaaatttttattgaaaa--aataattatttattaaa 44373  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 45548 - 45496
Alignment:
Q  118 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 170  Q
    ||||||| ||||||||||||  || | | ||||||||||||||||||||||||    
T  45548 attactattttaaacttctttacatatgtaaatttgcacatgatagaaaaact 45496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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