View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6981_high_5 (Length: 453)
Name: NF6981_high_5
Description: NF6981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6981_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 12 - 434
Target Start/End: Original strand, 48286423 - 48286845
Alignment:
| Q |
12 |
tgttgcacattttgcatcatcttcctcattctcttcttccttttcatcctcgccgccgcagttatctacattctctatcaaccttccataccagaattcc |
111 |
Q |
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| T |
48286423 |
tgttgcacattttgcatcatcttcctcattctcttcttccttttcatcctcgccgccgcagttatctacattctctaccaaccttccataccagaattcc |
48286522 |
T |
|
| Q |
112 |
acctcggttccttccgtgttccaagtttcaacataaccacaaaatccgacggtgcttatctcgacgcaaacacggtaacaatggtggaagtgaagaaccg |
211 |
Q |
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| T |
48286523 |
acctcggttctttccgtgttccaagtttcaacataaccacaaaatccgacggtgcttatctcgacgcaaacacgataacaatggtggaagtgaagaaccg |
48286622 |
T |
|
| Q |
212 |
taatgcaaaaatggtgtggcgttttgaacaaagtagtgttcagatatgggcagataatggtgatttgaatttaggatcgacgaaggtggctgcgtttgat |
311 |
Q |
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| T |
48286623 |
taatgcaaaaatggtgtggcgttttgaacaaagtagtgttcagatatgggcagataatggtgatttgaatttaggatcgacgaaggtggctgcgtttgat |
48286722 |
T |
|
| Q |
312 |
gtgaaggtgaagaataagacggcggtgaaggcggaaacgaaggttagacatgaggagttgaatgagaaacaaaggaggaagttgaaaagtgcttttagta |
411 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286723 |
gtgaaggtgaagaataagacggcggtgaagggggaaacgaaggttagacatgaggagttgaatgagaaacaaaggaggaagttgaaaagtgcttttagta |
48286822 |
T |
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| Q |
412 |
gtaaagctttggtgcctagtgtt |
434 |
Q |
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| T |
48286823 |
gtaaagctttggtgcctagtgtt |
48286845 |
T |
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