View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6981_low_12 (Length: 401)

Name: NF6981_low_12
Description: NF6981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6981_low_12
NF6981_low_12
[»] scaffold0510 (2 HSPs)
scaffold0510 (13-337)||(1752-2086)
scaffold0510 (62-337)||(8050-8325)
[»] chr3 (19 HSPs)
chr3 (58-337)||(32747152-32747431)
chr3 (58-337)||(6037063-6037343)
chr3 (58-337)||(24179856-24180135)
chr3 (24-261)||(25893965-25894214)
chr3 (58-261)||(9569755-9569960)
chr3 (58-254)||(9576265-9576462)
chr3 (58-337)||(27501115-27501394)
chr3 (58-210)||(4310754-4310906)
chr3 (58-261)||(23069272-23069477)
chr3 (67-303)||(10940507-10940744)
chr3 (65-306)||(43995853-43996096)
chr3 (65-292)||(47441615-47441843)
chr3 (69-231)||(43932358-43932521)
chr3 (90-209)||(20650357-20650477)
chr3 (98-210)||(2786532-2786645)
chr3 (10-57)||(4310929-4310977)
chr3 (13-55)||(23069194-23069236)
chr3 (220-261)||(9576228-9576270)
chr3 (122-170)||(460794-460842)
[»] chr1 (26 HSPs)
chr1 (58-337)||(1175377-1175655)
chr1 (10-323)||(23761525-23761835)
chr1 (27-337)||(26622213-26622523)
chr1 (62-337)||(41304689-41304964)
chr1 (58-253)||(45023318-45023513)
chr1 (10-261)||(28996734-28996994)
chr1 (10-261)||(29002450-29002710)
chr1 (58-337)||(45016576-45016855)
chr1 (58-337)||(42092691-42092970)
chr1 (58-261)||(6239439-6239643)
chr1 (10-261)||(43687356-43687619)
chr1 (58-261)||(39052541-39052745)
chr1 (58-261)||(39058913-39059117)
chr1 (67-334)||(9869888-9870156)
chr1 (62-261)||(35085788-35085989)
chr1 (62-337)||(44242143-44242419)
chr1 (10-253)||(4600256-4600507)
chr1 (67-231)||(1115258-1115423)
chr1 (68-231)||(32798516-32798679)
chr1 (68-306)||(31073133-31073368)
chr1 (96-211)||(44917212-44917327)
chr1 (290-337)||(35086015-35086062)
chr1 (287-337)||(4600541-4600591)
chr1 (287-337)||(6239668-6239718)
chr1 (130-242)||(9316777-9316889)
chr1 (308-336)||(31073419-31073447)
[»] chr5 (26 HSPs)
chr5 (58-337)||(42151602-42151881)
chr5 (58-332)||(25893812-25894086)
chr5 (58-337)||(40957775-40958054)
chr5 (10-337)||(5876941-5877280)
chr5 (58-337)||(29413827-29414106)
chr5 (58-334)||(22360746-22361022)
chr5 (10-334)||(22314553-22314888)
chr5 (58-261)||(2958655-2958859)
chr5 (58-261)||(2967124-2967328)
chr5 (58-261)||(29974754-29974958)
chr5 (58-261)||(29981257-29981461)
chr5 (58-261)||(30021684-30021888)
chr5 (62-261)||(4974353-4974554)
chr5 (58-251)||(34356499-34356692)
chr5 (58-251)||(34358290-34358483)
chr5 (65-231)||(12505043-12505209)
chr5 (69-231)||(2439580-2439743)
chr5 (122-229)||(30579487-30579594)
chr5 (287-337)||(25893744-25893794)
chr5 (13-46)||(4974289-4974322)
chr5 (117-231)||(2823099-2823214)
chr5 (287-337)||(2958884-2958934)
chr5 (287-337)||(2967353-2967403)
chr5 (287-337)||(29974983-29975033)
chr5 (287-337)||(29981486-29981536)
chr5 (287-337)||(30021609-30021659)
[»] chr2 (22 HSPs)
chr2 (58-337)||(16816497-16816775)
chr2 (58-337)||(16855654-16855932)
chr2 (10-337)||(21067086-21067415)
chr2 (10-261)||(36781417-36781679)
chr2 (58-261)||(15853333-15853537)
chr2 (58-337)||(43268643-43268922)
chr2 (58-261)||(42930615-42930818)
chr2 (10-337)||(2020606-2020945)
chr2 (13-261)||(21341174-21341422)
chr2 (58-202)||(29485678-29485822)
chr2 (58-337)||(2158406-2158685)
chr2 (58-337)||(2164822-2165101)
chr2 (58-337)||(12951593-12951872)
chr2 (58-337)||(34840404-34840683)
chr2 (58-337)||(45012778-45013057)
chr2 (58-253)||(34834044-34834239)
chr2 (58-337)||(13901121-13901395)
chr2 (287-333)||(29485868-29485914)
chr2 (287-337)||(34833960-34834010)
chr2 (119-210)||(11909264-11909356)
chr2 (213-253)||(11909160-11909200)
chr2 (122-170)||(34744644-34744692)
[»] scaffold0053 (2 HSPs)
scaffold0053 (65-337)||(71228-71500)
scaffold0053 (58-337)||(50485-50764)
[»] chr7 (37 HSPs)
chr7 (10-337)||(21643243-21643579)
chr7 (58-323)||(19090578-19090843)
chr7 (58-337)||(36876338-36876617)
chr7 (58-337)||(14299688-14299967)
chr7 (58-337)||(14288503-14288782)
chr7 (58-332)||(8192117-8192390)
chr7 (58-261)||(9642150-9642354)
chr7 (58-332)||(8184557-8184830)
chr7 (58-253)||(23613171-23613366)
chr7 (58-209)||(6020140-6020291)
chr7 (61-337)||(3923255-3923531)
chr7 (10-261)||(15949881-15950135)
chr7 (10-210)||(15915360-15915562)
chr7 (58-337)||(1379742-1380021)
chr7 (58-337)||(5049060-5049339)
chr7 (58-337)||(6796233-6796512)
chr7 (58-337)||(2447443-2447722)
chr7 (58-337)||(8141608-8141887)
chr7 (58-334)||(26602768-26603045)
chr7 (58-337)||(48346247-48346521)
chr7 (58-337)||(48352631-48352905)
chr7 (70-231)||(37026511-37026673)
chr7 (10-215)||(22853497-22853703)
chr7 (70-231)||(39433693-39433854)
chr7 (27-161)||(1947980-1948115)
chr7 (68-231)||(33849905-33850069)
chr7 (287-337)||(8184489-8184539)
chr7 (287-337)||(8192049-8192099)
chr7 (287-336)||(37027168-37027217)
chr7 (287-334)||(15953492-15953539)
chr7 (287-337)||(1386075-1386125)
chr7 (287-337)||(6020030-6020080)
chr7 (287-336)||(22853274-22853321)
chr7 (294-336)||(39434057-39434099)
chr7 (281-334)||(15925160-15925213)
chr7 (15-51)||(33850096-33850132)
chr7 (68-112)||(45434369-45434413)
[»] scaffold0513 (1 HSPs)
scaffold0513 (58-337)||(11304-11583)
[»] chr6 (25 HSPs)
chr6 (58-337)||(4737539-4737818)
chr6 (61-253)||(34710801-34710993)
chr6 (58-337)||(32327641-32327920)
chr6 (58-261)||(4187480-4187684)
chr6 (62-337)||(7061663-7061938)
chr6 (62-337)||(7068849-7069124)
chr6 (87-337)||(4668556-4668806)
chr6 (58-209)||(31548690-31548841)
chr6 (58-337)||(1427571-1427850)
chr6 (58-337)||(4019383-4019662)
chr6 (58-337)||(4025809-4026088)
chr6 (58-337)||(4717688-4717967)
chr6 (58-261)||(9863995-9864200)
chr6 (58-337)||(34649595-34649874)
chr6 (58-337)||(34656046-34656325)
chr6 (58-209)||(31128575-31128726)
chr6 (62-261)||(13671048-13671249)
chr6 (62-337)||(21261731-21262007)
chr6 (70-215)||(27670837-27670982)
chr6 (95-292)||(1166694-1166891)
chr6 (287-337)||(4668493-4668543)
chr6 (287-337)||(4737476-4737526)
chr6 (287-337)||(31548890-31548940)
chr6 (287-336)||(27671123-27671172)
chr6 (122-210)||(14121808-14121896)
[»] chr4 (17 HSPs)
chr4 (58-337)||(37367470-37367749)
chr4 (58-261)||(55462007-55462211)
chr4 (58-261)||(13594891-13595095)
chr4 (58-253)||(8104664-8104859)
chr4 (58-332)||(27591094-27591368)
chr4 (58-337)||(30239009-30239288)
chr4 (58-332)||(17457639-17457912)
chr4 (58-334)||(7781107-7781384)
chr4 (58-337)||(41373781-41374060)
chr4 (58-261)||(37355569-37355774)
chr4 (62-210)||(16406132-16406281)
chr4 (90-267)||(5659761-5659939)
chr4 (96-201)||(30210841-30210947)
chr4 (69-170)||(36754132-36754233)
chr4 (287-337)||(27591386-27591436)
chr4 (287-337)||(17457930-17457980)
chr4 (122-240)||(40975903-40976021)
[»] chr8 (17 HSPs)
chr8 (58-332)||(36424894-36425168)
chr8 (58-337)||(36020896-36021175)
chr8 (58-337)||(6463724-6464003)
chr8 (58-261)||(7312142-7312346)
chr8 (58-202)||(11357467-11357611)
chr8 (58-337)||(8012468-8012747)
chr8 (58-337)||(36004632-36004911)
chr8 (13-261)||(16709904-16710163)
chr8 (58-337)||(36076760-36077039)
chr8 (13-336)||(1238942-1239273)
chr8 (90-231)||(12769713-12769855)
chr8 (96-227)||(15013211-15013343)
chr8 (68-229)||(45067692-45067854)
chr8 (287-337)||(12769882-12769932)
chr8 (287-337)||(36424826-36424876)
chr8 (153-227)||(15013432-15013507)
chr8 (287-334)||(7312371-7312418)
[»] scaffold0475 (2 HSPs)
scaffold0475 (87-337)||(8605-8855)
scaffold0475 (287-337)||(8868-8918)
[»] scaffold0043 (1 HSPs)
scaffold0043 (58-337)||(4153-4432)
[»] scaffold0060 (1 HSPs)
scaffold0060 (96-231)||(15980-16116)
[»] scaffold0343 (3 HSPs)
scaffold0343 (112-215)||(3501-3604)
scaffold0343 (71-115)||(3442-3486)
scaffold0343 (294-336)||(3836-3878)
[»] scaffold1487 (1 HSPs)
scaffold1487 (122-254)||(1346-1478)
[»] scaffold0536 (1 HSPs)
scaffold0536 (300-337)||(11514-11551)


Alignment Details
Target: scaffold0510 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 1752 - 2086
Alignment:
Q  13 aatattacaagtgaaaaactatgaaaaactaagataaaactaagtat-----------ggttgagtgggctatttatagaattctgactctgtatcaact 101  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||           |||||||||||||||||||||||||||||||||| || ||||    
T  1752 aatattacaagtgaaaaactatcaaaaactcaga-aaaactaagtatatcaatgaaatggttgagtgggctatttatagaattctgactctgcataaact 1850  T
Q  102 cgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  1851 cgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgttagagactaaaccgccttaactcgcc 1950  T
Q  202 tcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttgagggcgaatgtaaaactagtgctccctggaattgctcacc 301  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  1951 tcgcgagtaaattcattcgccatggcgagtaagctcgccttccactcgccatgcgagttgagggcgaatgtaaaactggtgctccctggaattgctcgcc 2050  T
Q  302 tttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||||||||||||||||||||||||||||||||||||    
T  2051 tttgaagctcgccatggcgagttggaggcgagtgat 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 62 - 337
Target Start/End: Complemental strand, 8325 - 8050
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    |||| |||||||||||||||||||||| || | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  8325 ttgactgggctatttatagaattctgattcagcatcaaatcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgt 8226  T
Q  162 gccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttg 261  Q
    ||||| ||| ||||||   | |||||||||||||||| ||||||||||| || ||||  |||||||||||| ||||||||||||||||||||||||||||    
T  8225 gccacatcatctgtgaagagttaaaccgccctaactcccctcgcgagtacatccattctccatggcgagtatgctcgccttccactcgccatgcgagttg 8126  T
Q  262 agggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8125 agggcgaatgaaaaactggtgctccctggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 8050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 32747152 - 32747431
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32747152 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggt 32747251  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  32747252 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcattcgccatggagagtaagctcgccttccactcgccatgcga 32747351  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32747352 gttgagggcgaatgataaactggtgctccctggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 32747431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 6037063 - 6037343
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6037063 atggttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 6037162  T
Q  158 ttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||||| | | || |  |||||||||||||||||||||||||||||||| |||    
T  6037163 ttgtgccacgtcagctgtgagggggctaaaccgccctagctcgcctcgcgagtcattccactcaccatggcgagtaagctcgccttccactcgccattgc 6037262  T
Q  256 gagttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||||||  ||||  ||||||  | | |||   |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6037263 gagttggtggcg--tgtaaattttgttgcattctggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 6037343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 24179856 - 24180135
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24179856 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 24179955  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||  |||||||||||||| |||| ||||    
T  24179956 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactagccattgcg 24180055  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  24180056 agttggtggcgaa-ggatctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 24180135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 24 - 261
Target Start/End: Original strand, 25893965 - 25894214
Alignment:
Q  24 tgaaaaactatgaaaaactaagataaaactaagtat-----------ggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgag 112  Q
    ||||||||||||||||||||||| ||||||||||||           ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  25893965 tgaaaaactatgaaaaactaagagaaaactaagtatcacaatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgag 25894064  T
Q  113 ctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaa 212  Q
    ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25894065 ctccttcattcgccatggcgagttgaggttccttcttcattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaa 25894164  T
Q  213 ttcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
      |||| ||||||||||||  ||||||||||||||||||| |||||||||    
T  25894165 agcattcgccatggcgagtgggctcgccttccactcgccattgcgagttg 25894214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 9569960 - 9569755
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||| ||| |||| |||||||||    
T  9569960 atggttgagtgggctatttatagaattctgattctgtactaactcgcctcgcgagctccttccttcgccatggcgagttgaagtttcttccccattgggt 9569861  T
Q  158 ttgtgccacgtcagc-tgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    ||||||||||||||| | ||||||||||||||||| | ||||||||||||||| ||| || | ||||||| ||||||||||||||||||||||||| |||    
T  9569860 ttgtgccacgtcagcatttgagaggctaaaccgccttcactcgcctcgcgagtcaatccactcgccatggtgagtaagctcgccttccactcgccattgc 9569761  T
Q  256 gagttg 261  Q
    ||||||    
T  9569760 gagttg 9569755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 58 - 254
Target Start/End: Complemental strand, 9576462 - 9576265
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||| || ||||||||||||||| ||| |||| |||||||||    
T  9576462 atggttgagtgggctatttatagaattctgattctgtactaactcgcctcgcgagctccttcctttgccatggcgagttgaagtttcttccccattgggt 9576363  T
Q  158 ttgtgccacgtcagc-tgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatg 254  Q
    ||||||||||||||| | ||||||||||||||||| | ||||||||||||||| | | || | |||||||||||||||||||||||||||||||||||    
T  9576362 ttgtgccacgtcagcatttgagaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgccatg 9576265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 27501394 - 27501115
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||   ||||||||||||||||||||| ||| |||| |||||||||    
T  27501394 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcatcattcgccatggcgagttgaagtttcttccccattgggt 27501295  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  27501294 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 27501195  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  27501194 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 27501115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 4310906 - 4310754
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||  ||||||||| ||||||  |||||||||| ||||||||||| ||| |||| |||||||||    
T  4310906 atggttgagtgggctatttatagaattctgagtctgcatgcactcgcctcacgagctacttcattcgcc-tggcgagttgaagtttcttccccattgggt 4310808  T
Q  158 ttgtgccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagta 210  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  4310807 ttgtgccacgtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagta 4310754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 23069272 - 23069477
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||  |||||||| |||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  23069272 atggttgagtgggctatttatagaattctgagtctgcattcactcgccttgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 23069371  T
Q  158 ttgtgccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    |||  ||| ||||||  ||||| || ||||||||||||||||||||||||||||  |||  | |||||||| |  || ||||||||| |||||||| |||    
T  23069372 ttgaaccatgtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccatggcaaccaaactcgccttctactcgccattgc 23069471  T
Q  256 gagttg 261  Q
    ||||||    
T  23069472 gagttg 23069477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 303
Target Start/End: Complemental strand, 10940744 - 10940507
Alignment:
Q  67 tgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattc-attcgccatggcgagttgaggttccttcgccattgggtttgtgcca 165  Q
    ||||||||||||||||||||   |||| |||||||||||||||||| | | || ||||||||||||||||||| ||| |||| |||||  ||||| ||||    
T  10940744 tgggctatttatagaattcttgatctgcatcaactcgcctcgcgag-taactctattcgccatggcgagttgatgtttcttcaccattaagtttgagcca 10940646  T
Q  166 cgtcagctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc-atgcgagttgag 263  Q
    ||||  || |||| ||  ||  ||||||||||||||||| ||| |||||||| | ||||| ||||||  ||||||||| ||||||||  || ||||||||    
T  10940645 cgtcgcctttgaggagtttaggccgccctaactcgcctcacgattaaattcactcgccattgcgagt-tgctcgcctttcactcgccgttgtgagttgag 10940547  T
Q  264 ggcgaatgtaaaactagtgctccctggaattgctcacctt 303  Q
    ||||  || ||||||  ||||| |||||||||||| ||||    
T  10940546 ggcgtgtgaaaaactgatgctctctggaattgctcgcctt 10940507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 306
Target Start/End: Original strand, 43995853 - 43996096
Alignment:
Q  65 agtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgcc 164  Q
    |||||||||||||||| ||||    |||| || |||||||||||||||    |||| |||| |||||||||||||||| |||| ||| |||||||| |||    
T  43995853 agtgggctatttataggattcatgttctgcattaactcgcctcgcgagtaacttcactcgcaatggcgagttgaggttacttcaccagtgggtttgagcc 43995952  T
Q  165 acgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc-atgcgagttga 262  Q
    |||||| || ||| |||  || |||||||||||||||||||||||||||| || |  |||  ||||||  |||||||||| | |||||  ||||||||||    
T  43995953 acgtcacctttgaggagtttagaccgccctaactcgcctcgcgagtaaatgcactcaccagtgcgagt-tgctcgccttcaattcgcctttgcgagttga 43996051  T
Q  263 gggcgaatgtaaaactagtgctccctggaa-ttgctcacctttga 306  Q
    |||||  || ||||||  ||||| |||||| |||||| |||||||    
T  43996052 gggcgtgtgaaaaactgatgctctctggaacttgctcgcctttga 43996096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 292
Target Start/End: Original strand, 47441615 - 47441843
Alignment:
Q  65 agtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgcc 164  Q
    |||||||||||||||||||||    |||| ||||||||||||||||||    ||||||||| |||||||||||||||| |||| ||| |||||||| |||    
T  47441615 agtgggctatttatagaattcatgttctgcatcaactcgcctcgcgagtaacttcattcgcaatggcgagttgaggttacttcaccactgggtttgagcc 47441714  T
Q  165 acgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc-atgcgagttga 262  Q
    |||||| || ||| ||   ||   ||||||||||||||| | |||||||| || | ||||| ||||||  |||||||||||| |||||  || |||||||    
T  47441715 acgtcatctttgaggaatttaggtcgccctaactcgccttgtgagtaaatgcactcgccattgcgagt-tgctcgccttccattcgcctttgggagttga 47441813  T
Q  263 gggcgaatgtaaaactagtgctccctggaa 292  Q
    |||||  || ||||||  ||||| ||||||    
T  47441814 gggcgtgtgaaaaactgatgctctctggaa 47441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 43932358 - 43932521
Alignment:
Q  69 ggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgt 168  Q
    ||||||||||||||||||   |||| ||||||||||||||||||    | |||||||||||||||||||| ||| |||| |||||  ||||| |||||||    
T  43932358 ggctatttatagaattcttgatctgcatcaactcgcctcgcgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacgt 43932457  T
Q  169 cagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    || || | | |||  ||  ||||||||||||||||| ||||||| |||| | ||||| ||||||    
T  43932458 cacctctaaggagtttaggccgccctaactcgcctcacgagtaatttcactcgccattgcgagt 43932521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 20650477 - 20650357
Alignment:
Q  90 tctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaacc 188  Q
    |||| ||||||||||||||||||    ||||||||||||| |||||||||||| |||| | | |||||||||| ||||||| || ||| |||  | | ||    
T  20650477 tctgcatcaactcgcctcgcgagtagcttcattcgccatgccgagttgaggttacttcactagtgggtttgtgacacgtcacctctgaggagatttagcc 20650378  T
Q  189 gccctaactcgcctcgcgagt 209  Q
    |||||||||||||||||||||    
T  20650377 gccctaactcgcctcgcgagt 20650357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 210
Target Start/End: Original strand, 2786532 - 2786645
Alignment:
Q  98 aactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaac 196  Q
    |||||||||||| ||   || |||||||||||||||||||| ||| |||| ||| ||||||| ||||||||||||| ||| |||  | | ||||||||||    
T  2786532 aactcgcctcgcaagtaaatgcattcgccatggcgagttgatgtttcttcaccagtgggtttctgccacgtcagctttgaggagttttagccgccctaac 2786631  T
Q  197 tcgcctcgcgagta 210  Q
    ||||||||| ||||    
T  2786632 tcgcctcgcaagta 2786645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 4310977 - 4310929
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagat-aaaactaagt 57  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4310977 aagaatattacaagtgaaaaactatgaaaaactaagatcaaaactaagt 4310929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 23069194 - 23069236
Alignment:
Q  13 aatattacaagtgaaaaactatgaaaaactaagataaaactaa 55  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  23069194 aatattacaagtgaaaaactatgaaaaactaagagaaaactaa 23069236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 9576270 - 9576228
Alignment:
Q  220 gccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  9576270 gccatggcgagtaagctcgccttccactcgccattgcgagttg 9576228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 460842 - 460794
Alignment:
Q  122 tcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtca 170  Q
    |||||||||||||||||  || |||||||||||||||| ||||||||||    
T  460842 tcgccatggcgagttgaccttgcttcgccattgggtttttgccacgtca 460794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 1175377 - 1175655
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  1175377 atggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 1175476  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    ||||||||||||| ||||||   | || |||||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||||||||||||||||    
T  1175477 ttgtgccacgtcatctgtgaagagttagaccgccctaactcgcctcgcaagtacatccattcgccatggcgagtatgctcgccttccactcgccatgcga 1175576  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  1175577 gttgagggcgaatgaaaaactggtgctccctggaattgctcgcctttgaagctcgcc-tggcgagttggaggcgagtgat 1175655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 323
Target Start/End: Complemental strand, 23761835 - 23761525
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtatggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgc 109  Q
    |||||| ||||||||||||| |||| |||||||||||| || ||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  23761835 aagaatgttacaagtgaaaa-ctatcaaaaactaagattaa-ctaagtatgtttgagtgggctatttatagaattttgactctgcatccactcgcctcgc 23761738  T
Q  110 gagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaa-accgccctaactcgcctcgcgag 208  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || ||| ||  ||| |||||||||||||||||||||||    
T  23761737 gagctcattcattcgccatggcgagttgaggttacttcaccattgggtttgtgccacgtcaactatga-agcttaagaccgccctaactcgcctcgcgag 23761639  T
Q  209 taaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaag 308  Q
    ||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||    
T  23761638 taaatccattcgccatggtgagtaagctcaccttccactcgccatgcgagttgagggcgaat-aaaaactggtgctccctggaattgctcgcctttgaag 23761540  T
Q  309 ctcgccatggcgagt 323  Q
    |||||||||||||||    
T  23761539 ctcgccatggcgagt 23761525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 27 - 337
Target Start/End: Original strand, 26622213 - 26622523
Alignment:
Q  27 aaaactatgaaaaactaagataaaa-ctaagtatggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgc 125  Q
    |||| |||||||||||||||||||| || |  ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| |||||||||    
T  26622213 aaaagtatgaaaaactaagataaaaactgaa-atggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgc 26622311  T
Q  126 catggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatg 225  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||||||   | || ||||||||||||| ||||||||||| || |||| ||||||    
T  26622312 catggtgagttgaggttccttcaccattgggtttgtgccacgtcatctgtgaagagttagaccgccctaactcacctcgcgagtacatccattcgccatg 26622411  T
Q  226 gcgagtaagctcgccttccactcgccatgcgagttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttg 325  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||| | | |||||||| |||||||| ||||||||||||||||||||||||||    
T  26622412 gcgagtatgctcgccttccactcgccatgcgagttgagggcgaatgaaaaattggggctccctgaaattgctcgcctttgaagctcgccatggcgagttg 26622511  T
Q  326 gaggcgagtgat 337  Q
    ||||||||||||    
T  26622512 gaggcgagtgat 26622523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 62 - 337
Target Start/End: Complemental strand, 41304964 - 41304689
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    |||| |||||||||||||||||||||| || | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  41304964 ttgactgggctatttatagaattctgattcagcatcaaatcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgt 41304865  T
Q  162 gccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttg 261  Q
    ||||| ||| ||||||   | |||||||||||||||| ||||||||||| || ||||  |||||||||||| ||||||||||||||||||||||||||||    
T  41304864 gccacatcatctgtgaagagttaaaccgccctaactcccctcgcgagtacatccattctccatggcgagtatgctcgccttccactcgccatgcgagttg 41304765  T
Q  262 agggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41304764 agggcgaatgaaaaactggtgctccctggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 41304689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 45023318 - 45023513
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45023318 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggt 45023417  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||    
T  45023418 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgccat 45023513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 28996734 - 28996994
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtat----------ggttgagtgggctatttatagaattctgactctgtatcaa 99  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||          ||||||||||||||||||||||||||||| |||| |||||    
T  28996734 aagaatattacaagtgaaaaa-tatgaaaaactcaga-aaaactaagtattcaatgaaatggttgagtgggctatttatagaattctgattctgcatcaa 28996831  T
Q  100 ctcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcg 199  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||   | ||||||||||| |||||    
T  28996832 ctcgcctcgcgagctccttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtcatctgtgaagagttaaaccgccctcactcg 28996931  T
Q  200 cctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    ||||||||||| |  |||| | ||||||||||  ||||||||||||||||||| |||||||||    
T  28996932 cctcgcgagtagacacattcgtcatggcgagttggctcgccttccactcgccattgcgagttg 28996994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 29002450 - 29002710
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtat----------ggttgagtgggctatttatagaattctgactctgtatcaa 99  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||          ||||||||||||||||||||||||||||| |||| |||||    
T  29002450 aagaatattacaagtgaaaaa-tatgaaaaactcaga-aaaactaagtattcaatgaaatggttgagtgggctatttatagaattctgattctgcatcaa 29002547  T
Q  100 ctcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcg 199  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||   | ||||||||||| |||||    
T  29002548 ctcgcctcgcgagctccttcattcgccatggcgagttggagttccttcaccattgggtttgtgccacgtcatctgtgaagagttaaaccgccctcactcg 29002647  T
Q  200 cctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    ||||||||||| |  |||| | ||||||||||  ||||||||||||||||||| |||||||||    
T  29002648 cctcgcgagtagacacattcgtcatggcgagttggctcgccttccactcgccattgcgagttg 29002710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 45016576 - 45016855
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  45016576 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 45016675  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  45016676 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 45016775  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  45016776 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 45016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 42092691 - 42092970
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||| ||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  42092691 atggttgagtgggctctttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 42092790  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  42092791 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 42092890  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  42092891 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 42092970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 6239439 - 6239643
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||||||| |||||||||| ||| |||| |||||||||    
T  6239439 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggt 6239538  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  6239539 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 6239638  T
Q  257 agttg 261  Q
    |||||    
T  6239639 agttg 6239643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 43687356 - 43687619
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtat-----------ggttgagtgggctatttatagaattctgactctgtatca 98  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||||||           ||||||||||||||||||||||||||||| |||  ||      
T  43687356 aagaatattacaagtgaaaag-tatgaaaaactcagagaaaactaagtatctatctgaaatggttgagtgggctatttatagaattctgaatctacattc 43687454  T
Q  99 actcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggc-taaaccgccctaact 197  Q
    ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||| || |||||||||||||||    
T  43687455 actcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccacgtcagcagtgagaagcttaaaccgccctaact 43687554  T
Q  198 cgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    |||||||||||||  |||  | ||| ||||||  || ||||||||| |||||||| |||||||||    
T  43687555 cgcctcgcgagtactttccctcgccgtggcgaacaaactcgccttctactcgccattgcgagttg 43687619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 39052745 - 39052541
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  39052745 atggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 39052646  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||||| | | || | ||||||||||  |  ||||||||| |||||||| ||||    
T  39052645 ttgtgccacgtcagcattgagaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgccactgcg 39052546  T
Q  257 agttg 261  Q
    |||||    
T  39052545 agttg 39052541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 39059117 - 39058913
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  39059117 atggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 39059018  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||||| | | || | ||||||||||  |  ||||||||| |||||||| ||||    
T  39059017 ttgtgccacgtcagcattgagaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgccactgcg 39058918  T
Q  257 agttg 261  Q
    |||||    
T  39058917 agttg 39058913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 67 - 334
Target Start/End: Original strand, 9869888 - 9870156
Alignment:
Q  67 tgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 166  Q
    ||||||||||||| ||||||   |||| ||| ||||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||| ||||||||||    
T  9869888 tgggctatttataaaattctcgttctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaagtttcttcaccattggttttgtgccac 9869987  T
Q  167 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagg 264  Q
    || | || | | ||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||    |||||||| |||||||| |||||||||  |    
T  9869988 gtaacctctaaggagtctaaaccgccctaactcgccttgcgagtacattcattcgccatggcgagttcagtcgccttctactcgccattgcgagttggtg 9870087  T
Q  265 gcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    |||  || |   ||  ||||  |||||||||||| ||||||  |||||||||||||||||||||||||||    
T  9870088 gcgtgtg-atctctgttgcttactggaattgctcgcctttgctgctcgccatggcgagttggaggcgagt 9870156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 62 - 261
Target Start/End: Original strand, 35085788 - 35085989
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    ||||||| ||||||||||||||||| | |||| ||| ||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||||||    
T  35085788 ttgagtgagctatttatagaattctaaatctgcatccactcgcctcgcgagctccttcattcgccatggcgagttggagttccttcaccattgagtttgt 35085887  T
Q  162 gccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagt 259  Q
    ||||||||| | |||||| || |||||| |||||||||||||||||||||  | || ||||||||||||  |  ||||||||| |||||||| |||||||    
T  35085888 gccacgtcatcagtgagaagcttaaaccaccctaactcgcctcgcgagtacttgcacttgccatggcgaacatactcgccttctactcgccattgcgagt 35085987  T
Q  260 tg 261  Q
    ||    
T  35085988 tg 35085989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 62 - 337
Target Start/End: Original strand, 44242143 - 44242419
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    ||||||| ||||||||||||||||| | | || ||| ||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||    
T  44242143 ttgagtgagctatttatagaattctaaatatgcatccactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattgggtttgt 44242242  T
Q  162 gccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagt 259  Q
    ||||||||| | |||||| || ||||||||||||||||||||| ||||||  | || | ||||||||||  |  ||||||||  |||||||| |||||||    
T  44242243 gccacgtcatcagtgagaagcttaaaccgccctaactcgcctcacgagtacttgcactcgccatggcgaacagactcgccttttactcgccattgcgagt 44242342  T
Q  260 tgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||  ||||  || ||   | | ||||  |||||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  44242343 tggtggcg--tgcaatctttgttgcttactggaattgctcgcctttgctgctcgccatggcgagttggaggcgaatgat 44242419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 4600256 - 4600507
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaa-ctaagta-------tggttgagtgggctatttatagaattctgactctgtatcaact 101  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| |        || ||||||| ||||||||||||||| | | |||  ||| |||    
T  4600256 aagaatattacaagtgaaaa-ctatgaaaaactaagataaaaactaactcattgaactgattgagtgagctatttatagaattataaatctacatccact 4600354  T
Q  102 cgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggc-taaaccgccctaactcgc 200  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||  |||||||||||||||| |||| | |||||| || ||||||||||||||||||    
T  4600355 cgcctcgcgagctacttcattcgccatggcgagttgaagttccttcatcattgggtttgtgccatgtcatcagtgagaagcttaaaccgccctaactcgc 4600454  T
Q  201 ctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    ||||||||||  | || | ||||||||||  |  ||||||||| |||||||||    
T  4600455 ctcgcgagtacttgcactcgccatggcgaacagactcgccttctactcgccat 4600507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 1115423 - 1115258
Alignment:
Q  67 tgggctatttatagaa-ttctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgcca 165  Q
    ||||||||||||| || |||||| ||||  |||||||||||||||||||| |||||||||||||||||||| | |||||||| | | |||||||||||||    
T  1115423 tgggctatttatataaattctga-tctgcttcaactcgcctcgcgagctccttcattcgccatggcgagtttaagttccttcactagtgggtttgtgcca 1115325  T
Q  166 cgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    ||||| |||||| ||| |||  |||||||||||||||||||||||| || || | ||||||||||||    
T  1115324 cgtcatctgtgaggagtctaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagt 1115258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 32798516 - 32798679
Alignment:
Q  68 gggctatttatagaa-ttctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 166  Q
    ||||||||||||||| |||||| ||||  |||||||||||||||||||| ||||||||| ||||| ||| || |||||||| | ||||||||||||||||    
T  32798516 gggctatttatagaacttctga-tctgcttcaactcgcctcgcgagctccttcattcgctatggcaagt-gaagttccttcacgattgggtttgtgccac 32798613  T
Q  167 gtcagctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    |||| ||||||| ||  ||  |||||||||||||||||||||||| || || | ||||||||||||    
T  32798614 gtcatctgtgaggagtttaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagt 32798679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 306
Target Start/End: Original strand, 31073133 - 31073368
Alignment:
Q  68 gggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacg 167  Q
    |||||||||||||| |||| | |||| ||||||||||||| ||||    | |||||||||||||||||||| ||| |||| |||||  ||||| ||||||    
T  31073133 gggctatttatagatttcttaatctgcatcaactcgcctcacgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacg 31073232  T
Q  168 tcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgaggg 265  Q
    ||| |  ||| |||  ||  |||||||||||||||||||||||||||||| | ||||| |       |||| |||| ||||||||| |||||||| ||||    
T  31073233 tcacccttgaggagtttaggccgccctaactcgcctcgcgagtaaattcactcgccattg-----ttgctcacctttcactcgccattgcgagttaaggg 31073327  T
Q  266 cgaatgtaaaactagtgctccctggaattgctcacctttga 306  Q
    ||| || ||||||  ||||| ||| |||||||| |||||||    
T  31073328 cgagtgaaaaactgatgctctctgtaattgctcgcctttga 31073368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 44917212 - 44917327
Alignment:
Q  96 tcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaa 195  Q
    |||||||||||||||||    ||||||| |||||||||||||||||| |||| ||| |||| ||||||||| ||| || | ||  | | | |||||||||    
T  44917212 tcaactcgcctcgcgagtaacttcattctccatggcgagttgaggttacttcaccagtgggattgtgccacatcacctctaaggagtttagccgccctaa 44917311  T
Q  196 ctcgcctcgcgagtaa 211  Q
    ||| ||||||| ||||    
T  44917312 ctcacctcgcgggtaa 44917327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 35086015 - 35086062
Alignment:
Q  290 gaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  35086015 gaattgctcgcctttgctgctcgccatggcgagttggaggcgaatgat 35086062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 4600541 - 4600591
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||  |||| |||||||||||||||||||| ||||    
T  4600541 ctggaattgctcgcctttgctgctcaccatggcgagttggaggcgaatgat 4600591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 6239668 - 6239718
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  6239668 ctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 6239718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 9316777 - 9316889
Alignment:
Q  130 gcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcga 229  Q
    |||||||||| || |||  ||| ||||||| ||||||||||||| |||  |  ||  ||||| ||||||||||||||||||| ||   | |||||||| |    
T  9316777 gcgagttgagctttctttcccagtgggtttctgccacgtcagctttgaaggattaggccgccttaactcgcctcgcgagtaattttgctcgccatggcaa 9316876  T
Q  230 gtaagctcgcctt 242  Q
    || ||||||||||    
T  9316877 gttagctcgcctt 9316889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 336
Target Start/End: Original strand, 31073419 - 31073447
Alignment:
Q  308 gctcgccatggcgagttggaggcgagtga 336  Q
    |||||||||||||||||||||||||||||    
T  31073419 gctcgccatggcgagttggaggcgagtga 31073447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 42151602 - 42151881
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  42151602 atggttgagtggactatttatagaattctgattctgtatccactcgcctcgcgagctccttcagtcgccatggcgagttgaggttccttcaccattgggt 42151701  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    ||||||||||||| ||||||   | ||||||||||| |||||||||||||||| || ||||  |||||||||||| |||||||||||||| |||||||||    
T  42151702 ttgtgccacgtcatctgtgaagagttaaaccgccctcactcgcctcgcgagtacatccattcaccatggcgagtatgctcgccttccacttgccatgcga 42151801  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  42151802 gttgagggcgaatgaaaaactggtgctccctggaattgctcgcctttgaagctcaccatggcgagtttgaggcgagtgat 42151881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 58 - 332
Target Start/End: Complemental strand, 25894086 - 25893812
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25894086 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 25893987  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||   |||||||||||||||||| ||||    
T  25893986 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgccattgcg 25893887  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcga 332  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| ||||||||||| |||||||||    
T  25893886 agttggtggcgaaag-atctttgatgcttactggaattgctcgcctttgatgcttgccatggcgaggtggaggcga 25893812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 40958054 - 40957775
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40958054 atggttgagtgggctatttatagaattttgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 40957955  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || | ||||||||||||  ||||||||||||||||||| || |    
T  40957954 ttgtgccacgtcagctgtgagaggctaaaccgccctagctcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgccattgtg 40957855  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  |||||   | | ||||  |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  40957854 agttggtggcg--tgtaatctttgttgctttctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 40957775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 10 - 337
Target Start/End: Original strand, 5876941 - 5877280
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtat-----------ggttgagtgggct-atttatagaattctgactctgtatc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||           ||||||||||||| |||||||||||||||| |||| |||    
T  5876941 aagaatattacaagtgaaaaactatgaaaaactaagattaaactaagtatatccatgaaatggttgagtgggcttatttatagaattctgattctgcatc 5877040  T
Q  98 aactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaact 197  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||   | |||||||||||||||    
T  5877041 aactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccatgtcatctgtgaagagttaaaccgccctaact 5877140  T
Q  198 cgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagggcgaatgtaaaactagtgctccctggaattgc 296  Q
    ||||||||||||| |  |||| ||||||||||||  ||||||||||||||||||| |||||||||  |||||| | |    |  ||||| ||||||||||    
T  5877141 cgcctcgcgagtagacacattcgccatggcgagttcgctcgccttccactcgccattgcgagttggtggcgaa-ggatctttgatgctcactggaattgc 5877239  T
Q  297 tcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    || ||||||  ||| ||||||||||||||||||||||||||    
T  5877240 tcgcctttgctgctagccatggcgagttggaggcgagtgat 5877280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 29414106 - 29413827
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  29414106 atggttgagtgggctatttatagaattctgattctgcatccactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 29414007  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||| ||||||   | ||||||||||| |||||||||||||||| |  | || ||||||||||||  ||||||||||||||||||| ||||    
T  29414006 ttgtgccacgtcatctgtgaagagttaaaccgccctcactcgcctcgcgagtagacacgttcgccatggcgagtttgctcgccttccactcgccattgcg 29413907  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  |||||| | |    |  ||||  || ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  29413906 agttggtggcgaa-ggatctttgatgcttactcgaattgctcgcctttgaagctcgtcatggcgagttggaggcgagtgat 29413827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 58 - 334
Target Start/End: Original strand, 22360746 - 22361022
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22360746 atggttgagtgagctatttatagaattctgattctgtatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 22360845  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||  |||||   | |||||||||||||||||||||||||||| |  |||| ||||||||||||   |||||||||||||||||| ||||    
T  22360846 ttgtgccacgtcatatgtgaagagttaaaccgccctaactcgcctcgcgagtagacacattcgccatggcgagttctctcgccttccactcgccattgcg 22360945  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    |||||  |||||| | |    |  ||||| ||| |||||||| |||||   |||||||||||||||||||||||||||    
T  22360946 agttggtggcgaa-ggatctttgatgctcactgaaattgctcgccttttctgctcgccatggcgagttggaggcgagt 22361022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 334
Target Start/End: Original strand, 22314553 - 22314888
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaa-ctaagtat-----------ggttgagtgggctatttatagaattctgactctgtatc 97  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||||||           ||||||||||||||||||||||||||||| | ||||||    
T  22314553 aagaatgttacaagtgaaaa-ctatgaaaaactaagataaaaactaagtatatcaatgaaatggttgagtgggctatttatagaattctgattttgtatc 22314651  T
Q  98 aactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaact 197  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||   | |||||||||||||||    
T  22314652 aactcacctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccaagtcatctgtgaagagttaaaccgccctaact 22314751  T
Q  198 cgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagggcgaatgtaaaactagtgctccctggaattgc 296  Q
    ||||||||||||| |  |||||||||||||||||   |||||||||||||||||| | |||||||  |||||| | |    |  ||||| ||||||||||    
T  22314752 cgcctcgcgagtacacacatttgccatggcgagttctctcgccttccactcgccattacgagttggtggcgaa-ggatctttgatgctcactggaattgc 22314850  T
Q  297 tcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    || |||||   ||| |||||||||||||||||||||||    
T  22314851 tcgccttttctgctagccatggcgagttggaggcgagt 22314888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 2958655 - 2958859
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||||||| |||||||||| ||| |||| |||||||||    
T  2958655 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggt 2958754  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  2958755 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 2958854  T
Q  257 agttg 261  Q
    |||||    
T  2958855 agttg 2958859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 2967124 - 2967328
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||||||| |||||||||| ||| |||| |||||||||    
T  2967124 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggt 2967223  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  2967224 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 2967323  T
Q  257 agttg 261  Q
    |||||    
T  2967324 agttg 2967328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 29974754 - 29974958
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||||||| |||||||||| ||| |||| |||||||||    
T  29974754 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggt 29974853  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  29974854 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 29974953  T
Q  257 agttg 261  Q
    |||||    
T  29974954 agttg 29974958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 29981257 - 29981461
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||||||| |||||||||| ||| |||| |||||||||    
T  29981257 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggt 29981356  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  29981357 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 29981456  T
Q  257 agttg 261  Q
    |||||    
T  29981457 agttg 29981461  T

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Target: chr5; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 30021888 - 30021684
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||||||| |||||||||| ||| |||| |||||||||    
T  30021888 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggt 30021789  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  30021788 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 30021689  T
Q  257 agttg 261  Q
    |||||    
T  30021688 agttg 30021684  T

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Target: chr5; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 62 - 261
Target Start/End: Original strand, 4974353 - 4974554
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    |||| ||||||||||||| |||||| | |||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||  |||||||||||||    
T  4974353 ttgaatgggctatttataaaattctaaatctgtatccactcgcctcgcgagctccttcattcgccatggcaagttgaagttcctttaccattgggtttgt 4974452  T
Q  162 gccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagt 259  Q
    ||||||||| | |||||| || ||||||||||||||||||||||||||||  ||| || ||||||| ||  || ||||||||| |||||||| |||||||    
T  4974453 gccacgtcatcagtgagaagcttaaaccgccctaactcgcctcgcgagtactttccttcgccatggtgaacaaactcgccttctactcgccattgcgagt 4974552  T
Q  260 tg 261  Q
    ||    
T  4974553 tg 4974554  T

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Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 34356692 - 34356499
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  34356692 atggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 34356593  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc 251  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||||| | | || | ||||||||||  |  ||||||||| |||||||    
T  34356592 ttgtgccacgtcagcattgagaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgcc 34356499  T

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Target: chr5; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 34358483 - 34358290
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||| ||||||| ||||  | ||||||||||||| |||  |||||||||||||||||||||| ||| |||| |||||||||    
T  34358483 atggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgggctacttcattcgccatggcgagttgaagtttcttccccattgggt 34358384  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc 251  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||||| | | || | ||||||||||  |  ||||||||| |||||||    
T  34358383 ttgtgccacgtcagcattgagaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgcc 34358290  T

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Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 12505209 - 12505043
Alignment:
Q  65 agtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgcc 164  Q
    |||||||||||||||||||||  | | |  ||||||||||||||||||    ||||||||| ||||||||| |||||| |||| ||| |||||||| |||    
T  12505209 agtgggctatttatagaattcccattattcatcaactcgcctcgcgagtaacttcattcgcaatggcgagt-gaggttacttcaccagtgggtttgagcc 12505111  T
Q  165 acgtcagctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    || ||| || |||| ||  ||  ||||||||||||||||||||||||||| |||| ||||| ||||||    
T  12505110 acatcacctttgaggagtttaggccgccctaactcgcctcgcgagtaaatgcattcgccattgcgagt 12505043  T

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Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 2439580 - 2439743
Alignment:
Q  69 ggctatttatagaattc-tgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacg 167  Q
    ||||||||||||||||| ||| | || ||||||||||||||||||    | |||||||||||| ||||||| ||| |||| |||||  ||||| ||||||    
T  2439580 ggctatttatagaattcctgatt-tgcatcaactcgcctcgcgagtaactccattcgccatggtgagttgatgtttcttcaccattaagtttgagccacg 2439678  T
Q  168 tcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    ||| || ||| |||  ||   |||||||||| ||||||||||||| |||| | ||||| ||||||    
T  2439679 tcacctctgaggagtttagggcgccctaacttgcctcgcgagtaatttcactcgccattgcgagt 2439743  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 30579594 - 30579487
Alignment:
Q  122 tcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttg 220  Q
    ||||||||||||||||| ||| |||| ||| ||||||| ||||||||||||| ||| |||  |   ||||| |||||||||||||||||| ||| ||| |    
T  30579594 tcgccatggcgagttgatgtttcttcaccagtgggtttctgccacgtcagctctgaggagttttggccgccttaactcgcctcgcgagtatatt-attcg 30579496  T
Q  221 ccatggcga 229  Q
    |||||||||    
T  30579495 ccatggcga 30579487  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 25893794 - 25893744
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| |||||||| |||||||||||||||||    
T  25893794 ctggaattgctcgcctttgatgcttgccatggcaagttggaggcgagtgat 25893744  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 4974289 - 4974322
Alignment:
Q  13 aatattacaagtgaaaaactatgaaaaactaaga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  4974289 aatattacaagtgaaaaactatgaaaaactaaga 4974322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 2823099 - 2823214
Alignment:
Q  117 ttcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattc 215  Q
    ||||||||||||||||||||||| || |||| ||| ||| | |||| ||||||| || ||| |||  | | |||||||||||||||| | |||||||| |    
T  2823099 ttcattcgccatggcgagttgagatttcttcaccagtggatctgtgacacgtcacctctgaggagttttagccgccctaactcgccttgtgagtaaatcc 2823198  T
Q  216 atttgccatggcgagt 231  Q
    | | ||||| ||||||    
T  2823199 actcgccattgcgagt 2823214  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 2958884 - 2958934
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  2958884 ctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 2958934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 2967353 - 2967403
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  2967353 ctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 2967403  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 29974983 - 29975033
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  29974983 ctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 29975033  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 29981486 - 29981536
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  29981486 ctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 29981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 30021659 - 30021609
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  30021659 ctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 30021609  T

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Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 16816775 - 16816497
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  16816775 atggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgtgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 16816676  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    ||||||||||||| ||||||   | || |||||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||||||||||||||||    
T  16816675 ttgtgccacgtcatctgtgaagagttagaccgccctaactcgcctcgcaagtacatccattcgccatggcgagtatgctcgccttccactcgccatgcga 16816576  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16816575 gttgagggcgaatgaaaaactggtgctcactggaattgctcgcctttgaagctcgcc-tggcgagttggaggcgagtgat 16816497  T

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Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 16855932 - 16855654
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  16855932 atggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgtgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 16855833  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    ||||||||||||| ||||||   | || |||||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||||||||||||||||    
T  16855832 ttgtgccacgtcatctgtgaagagttagaccgccctaactcgcctcgcaagtacatccattcgccatggcgagtatgctcgccttccactcgccatgcga 16855733  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16855732 gttgagggcgaatgaaaaactggtgctcactggaattgctcgcctttgaagctcgcc-tggcgagttggaggcgagtgat 16855654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 10 - 337
Target Start/End: Complemental strand, 21067415 - 21067086
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaa-gataaaactaagta-tggttgagtgggctatttatagaattctgactctgtatcaactcgcctc 107  Q
    ||||||||||||||||||||||||||||||||||| |||     || | | ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21067415 aagaatattacaagtgaaaaactatgaaaaactaaagattttt-tatgaaatggttgagtgggctatttataaaattctgactctgtatcaactcgcctc 21067317  T
Q  108 gcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtg-agaggctaaaccgccctaactcgcctcgcg 206  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||  || |||||| ||||||||||||||    
T  21067316 gcgagctccttcattcgccatggcgagttgcggttccttcaccattgggtttgtgccacgtcagctgtgaagagtttagaccgccataactcgcctcgcg 21067217  T
Q  207 agtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttgagggcgaatgtaaaactagtgctccctggaattgctcacctttga 306  Q
    || | || |||| ||||||||||||  ||||||||| ||| |||||||||||||||||| ||||| ||| ||  ||||| |||||||||||| |||||||    
T  21067216 agcacatccattcgccatggcgagtgtgctcgcctttcacccgccatgcgagttgagggagaatgaaaatctgatgctctctggaattgctcgcctttga 21067117  T
Q  307 agctcgccatggcgagttggaggcgagtgat 337  Q
    ||||||||||||| |||||||||||||||||    
T  21067116 agctcgccatggcaagttggaggcgagtgat 21067086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 10 - 261
Target Start/End: Complemental strand, 36781679 - 36781417
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtat-----------ggttgagtgggctatttatagaattctgactctgtatca 98  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||||||           ||||||||||||||||||||||||||||| |||| |||     
T  36781679 aagaatattacaagtgaaaag-tatgaaaaactcagagaaaactaagtatctcaatgaaatggttgagtgggctatttatagaattctgattctgcatct 36781581  T
Q  99 actcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactc 198  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36781580 actcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagagggtaaaccgccctaactc 36781481  T
Q  199 gcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    |||||||||||||| ||||| ||||||||||||  ||||||||||||||||||| |||||||||    
T  36781480 gcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgccattgcgagttg 36781417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 15853333 - 15853537
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15853333 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggt 15853432  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||  ||||||||||||||||||| ||||    
T  15853433 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaaatcattcaccatggcgagtgggctcgccttccactcgccattgcg 15853532  T
Q  257 agttg 261  Q
    |||||    
T  15853533 agttg 15853537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 43268643 - 43268922
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43268643 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcaatcgccatggcgagttgaggttccttcgccattgggt 43268742  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||| | | || | ||||||||||||||||||||||||||||||||| ||||    
T  43268743 ttgtgccacgtcagctgtaagaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgccattgcg 43268842  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| |||||||  || ||||||||||||||||||||||||||    
T  43268843 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgatacttgccatggcgagttggaggcgagtgat 43268922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 42930818 - 42930615
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42930818 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggt 42930719  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||| ||||    
T  42930718 ttgtgccacgtcagctgtgagaggct-aaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgccattgcg 42930620  T
Q  257 agttg 261  Q
    |||||    
T  42930619 agttg 42930615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 10 - 337
Target Start/End: Complemental strand, 2020945 - 2020606
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagat-aaaactaagtat-----------ggttgagtgggctatttatagaattctgactctgtatc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||           ||||||||||||||||||||||||||||| |||| ||     
T  2020945 aagaatattacaagtgaaaaactatgaaaaactaagattaaaactaagtatatcaatgaaatggttgagtgggctatttatagaattctgattctgcatt 2020846  T
Q  98 aactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaact 197  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||   | |||||||||||||||    
T  2020845 aacttgcctcgcgagctctttcattcgtcatggcgagttgaggttccttcaccattgggtttgtgccacgtcatctgtgaagagttaaaccgccctaact 2020746  T
Q  198 cgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagggcgaatgtaaaactagtgctccctggaattgc 296  Q
    ||||||||||||| |   ||| ||||||||||||  |||||||||||||| |||| |||||||||  |||||| | |    |  ||||  ||||||||||    
T  2020745 cgcctcgcgagtatacatattcgccatggcgagttcgctcgccttccactagccattgcgagttggtggcgaa-ggatctttgatgcttactggaattgc 2020647  T
Q  297 tcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    || ||||||||||||||||||||||||| ||||||||||||    
T  2020646 tcgcctttgaagctcgccatggcgagttagaggcgagtgat 2020606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 261
Target Start/End: Complemental strand, 21341422 - 21341174
Alignment:
Q  13 aatattacaagtgaaaaactatgaaaaactaagataa--aactaagtatggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcg 110  Q
    ||||||||||||||||| |||||||||||||||||    ||  ||  ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  21341422 aatattacaagtgaaaa-ctatgaaaaactaagattcttaatgaa--atggttgagtgggctatttatagaattctgattctgcatcaattcgcctcgcg 21341326  T
Q  111 agctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagt 209  Q
    ||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  21341325 agcttcttcattcgccatggcgagttgaggttccttcaccattggttttgtgccacgtcagctgtgaggagtctaagtcgccctaactcgcctcgcgagt 21341226  T
Q  210 aaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttg 261  Q
    | | ||||| ||||||||||||  |||||||||| |||||||||||||||||    
T  21341225 acaatcattcgccatggcgagttggctcgccttcaactcgccatgcgagttg 21341174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 29485678 - 29485822
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29485678 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 29485777  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcct 202  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  29485778 ttgtgccacgtcagctgtgagaggctaaactgccctaactcgcct 29485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 2158406 - 2158685
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  2158406 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 2158505  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  2158506 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 2158605  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  2158606 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 2158685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 2164822 - 2165101
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  2164822 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 2164921  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  2164922 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 2165021  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  2165022 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 2165101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 12951593 - 12951872
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||| ||||||||||||| ||| |||| |||||||||    
T  12951593 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgtcatggcgagttgaagtttcttccccattgggt 12951692  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  12951693 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 12951792  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  12951793 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 12951872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 34840683 - 34840404
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  34840683 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 34840584  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||| ||||    
T  34840583 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccattgcg 34840484  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  34840483 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 34840404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 45012778 - 45013057
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  45012778 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 45012877  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||| ||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  45012878 ttgtgccacgtcagcatttagaggctaaaccgcccttactcccctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 45012977  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  45012978 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 45013057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 34834239 - 34834044
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  34834239 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 34834140  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||| ||||||||||||||||||| |||||||||    
T  34834139 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgccat 34834044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 13901395 - 13901121
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||     |||||  ||||||| |||||||||||||| ||| |||| |||||||||    
T  13901395 atggttgagtgggctatttatagaattctgactctgcatcaactcgc-----gagctacttcattcaccatggcgagttgaagttacttccccattgggt 13901301  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||| | | || | |||||||||||||||||||||||| ||||| || ||||    
T  13901300 ttgtgccacgtcagctgtgaggggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttctactcgtcattgcg 13901201  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  13901200 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 13901121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 29485868 - 29485914
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgag 333  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  29485868 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgag 29485914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 34834010 - 34833960
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  34834010 ctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 34833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 11909356 - 11909264
Alignment:
Q  119 cattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgag-aggctaaaccgccctaactcgcctcgcgagta 210  Q
    |||||||||||| ||||||  ||| ||||  || ||||||| ||||||||||||| |||| ||  | | ||||||||||||||||||||||||    
T  11909356 cattcgccatggtgagttgctgttacttcatcagtgggtttctgccacgtcagctctgaggagttttagccgccctaactcgcctcgcgagta 11909264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 11909200 - 11909160
Alignment:
Q  213 ttcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    |||| ||||||||||||||  ||||||||||||||||||||    
T  11909200 ttcacttgccatggcgagtttgctcgccttccactcgccat 11909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 34744692 - 34744644
Alignment:
Q  122 tcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtca 170  Q
    ||||||||||||| |||| || |||| ||||||||||| ||||||||||    
T  34744692 tcgccatggcgaggtgagcttgcttcaccattgggtttctgccacgtca 34744644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 65 - 337
Target Start/End: Original strand, 71228 - 71500
Alignment:
Q  65 agtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgcc 164  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  71228 agtgggctatttatagaattctgattctgcatgcactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgcc 71327  T
Q  165 acgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcgagttgagg 264  Q
    |||||| ||||||   | || | ||| ||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  71328 acgtcatctgtgaagagttagatcgcgctaactcgcctcgcgagtacatccatttgccatggtgagtatgctcgccttccactcgccatgcgagttgagg 71427  T
Q  265 gcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    || |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  71428 gcaaatgaaaaactggtgctccctggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 71500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 50485 - 50764
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  50485 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 50584  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  50585 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 50684  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  50685 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 50764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 2e-99; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 10 - 337
Target Start/End: Original strand, 21643243 - 21643579
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagtat-----------ggttgagtgggctatttatagaattctgactctgtatca 98  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||||||           |||||||||||||||||||||||||||||||||| ||||    
T  21643243 aagaatattacaagtgaaaag-tatgaaaaactcagagaaaactaagtatatcaatgaaatggttgagtgggctatttatagaattctgactctgcatca 21643341  T
Q  99 actcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21643342 actcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctagctc 21643441  T
Q  199 gcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagggcgaatgtaaaactag-tgctccctggaattgc 296  Q
    |||||||||| |||| || | |||||||||||||||||||||||||||| |||| |||||||||  ||||  |||||   | | |||   ||||||||||    
T  21643442 gcctcgcgag-aaatgcactcgccatggcgagtaagctcgccttccactagccattgcgagttggtggcg--tgtaatctttgttgcattctggaattgc 21643538  T
Q  297 tcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  21643539 tcgcctttgaagctcgccatggcgagttggaggcgagtgat 21643579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 58 - 323
Target Start/End: Original strand, 19090578 - 19090843
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  19090578 atggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 19090677  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    ||||||||||||| ||||||   | || || ||||||||||||||||| |||| || || | ||||||||||||| ||||||||||||||||||||||||    
T  19090678 ttgtgccacgtcatctgtgaagagttagactgccctaactcgcctcgcaagtacatccactcgccatggcgagtatgctcgccttccactcgccatgcga 19090777  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagt 323  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  19090778 gttgagggcgaatgaaaaactggtgctccctggaattgctcgcctttgaagctcgccatggcgagt 19090843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 36876338 - 36876617
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36876338 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 36876437  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| || | | || | |||||||||||||||||||||| |||||||||| ||||    
T  36876438 ttgtgccacgtcagctgtgagcggctaaaccgccctagctcgcctcgcgggtcattccactcgccatggcgagtaagctcgcctgccactcgccattgcg 36876537  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||||||  | | |||    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36876538 agttggtggcg--tgtaaattttgttgcattatggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 36876617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 14299688 - 14299967
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14299688 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 14299787  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||   |||||||||||||||||| ||||    
T  14299788 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgccattgcg 14299887  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  || ||| | |    |  ||||  |||||||||||| ||||||| ||| || |||||||||||||||||||||||    
T  14299888 agttggtggtgaa-ggatctttgatgcttactggaattgctcgcctttgatgcttgctatggcgagttggaggcgagtgat 14299967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 14288503 - 14288782
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14288503 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 14288602  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat-gcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||   ||||||||||||||||||| |||    
T  14288603 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgccattgcg 14288702  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  || ||| | |    |  ||||  |||||||||||  ||||||| ||| || |||||||||||||||||||||||    
T  14288703 agttggtggtgaagg-atctttgatgcttactggaattgcttgcctttgatgcttgctatggcgagttggaggcgagtgat 14288782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 58 - 332
Target Start/End: Complemental strand, 8192390 - 8192117
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8192390 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 8192291  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| | | || | ||||||||||||   |||||||||||||||||| ||||    
T  8192290 ttgtgccacgtcagctgtgagaggctaaaccgccct-actcgcctcgcgagtcattccactcgccatggcgagtgttctcgccttccactcgccattgcg 8192192  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcga 332  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  8192191 agttggtggcgaaag-atctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcga 8192117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 9642354 - 9642150
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9642354 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggt 9642255  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||  ||||||||||||||||||| ||||    
T  9642254 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgtgagtaaaatcattcgccatgacgagtgggctcgccttccactcgccattgcg 9642155  T
Q  257 agttg 261  Q
    |||||    
T  9642154 agttg 9642150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 58 - 332
Target Start/End: Complemental strand, 8184830 - 8184557
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8184830 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 8184731  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| | | || | |||||||| |||   |||||||||||||||||| ||||    
T  8184730 ttgtgccacgtcagctgtgagaggctaaaccgccct-actcgcctcgcgagtcattccactcgccatggctagtgttctcgccttccactcgccattgcg 8184632  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcga 332  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  8184631 agttggtggcgaaag-atctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcga 8184557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 23613171 - 23613366
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23613171 atggttgagtgggctatttatagaattccgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 23613270  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||| | | || | ||||||||||||  ||||||||||||||||||||    
T  23613271 ttgtgccacgtcagctgtgagaggctaaacctccctagctcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgccat 23613366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 6020291 - 6020140
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6020291 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 6020192  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagt 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6020191 ttgtgccacgtcagatgtgagaggctaaaccgccctaactcgcctcgcgagt 6020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 61 - 337
Target Start/End: Complemental strand, 3923531 - 3923255
Alignment:
Q  61 gttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttg 160  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3923531 gttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttaaggttccttcgccattgggtttg 3923432  T
Q  161 tgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagt 259  Q
    |||||||||||| |||||||||||||| || || |||||||||||||||| |  |||| ||||||||||||  | ||||||||||||||||| |||||||    
T  3923431 tgccacgtcagcggtgagaggctaaactgctcttactcgcctcgcgagtagacacattcgccatggcgagtttgttcgccttccactcgccattgcgagt 3923332  T
Q  260 tgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||  |||||| | |    |  ||||  |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  3923331 tggtggcgaaag-atctttgatgcttactggaattgctcgcctttgttgcttgccatggcgagttggaggcgagtgat 3923255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 15949881 - 15950135
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagat---aaaactaagtatggttgagtgggctatttatagaattctgactctgtatcaactcgcct 106  Q
    ||||||||||||||||||||||||||||||||||| |    |||||| || |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  15949881 aagaatattacaagtgaaaaactatgaaaaactaatacccaaaaactgag-atggttgagtgggctatttatagaattctgactctacatcaactcgcct 15949979  T
Q  107 cgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcg 206  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || |||   | ||||||||||||||||||||||||    
T  15949980 cgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccacatcatctatgaagagttaaaccgccctaactcgcctcgcg 15950079  T
Q  207 agtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    |||| |  |||| ||||||||||||  ||| ||||| ||||||||| |||||||||    
T  15950080 agtagacacattcgccatggcgagttcgcttgcctttcactcgccattgcgagttg 15950135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 210
Target Start/End: Original strand, 15915360 - 15915562
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagat---aaaactaagtatggttgagtgggctatttatagaattctgactctgtatcaactcgcct 106  Q
    ||||||||||||| ||||||||||||||||||||| |    |||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  15915360 aagaatattacaattgaaaaactatgaaaaactaatacccaaaaactgag-atgattgagtgggctatttatagaattctgactctgcatcaactcgcct 15915458  T
Q  107 cgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcg 206  Q
    ||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||   | ||||||||||||||||||||||||    
T  15915459 cgcaagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccatgtcatctgtgaagagttaaaccgccctaactcgcctcgcg 15915558  T
Q  207 agta 210  Q
    ||||    
T  15915559 agta 15915562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 1379742 - 1380021
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  1379742 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 1379841  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  1379842 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 1379941  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  1379942 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 1380021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 5049339 - 5049060
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  5049339 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 5049240  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  5049239 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 5049140  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  5049139 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 5049060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 6796233 - 6796512
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  6796233 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 6796332  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  6796333 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 6796432  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  6796433 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 6796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 2447443 - 2447722
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  2447443 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 2447542  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| ||| |||| ||||    
T  2447543 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactagccattgcg 2447642  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  2447643 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 2447722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 8141887 - 8141608
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||| ||||||||||||||||| ||| |||| |||||||||    
T  8141887 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcaatcgccatggcgagttgaagtttcttccccattgggt 8141788  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  8141787 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 8141688  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  8141687 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 8141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 334
Target Start/End: Original strand, 26602768 - 26603045
Alignment:
Q  58 atggttgagtgggct-atttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattggg 156  Q
    ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||    
T  26602768 atggttgagtgggcttatttatagaattctgattctgcatcaactcgcctcgcgagctccttaattcgccatggtgagttgaggttccttcaccattggg 26602867  T
Q  157 tttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    |||||||||||||| ||||||   | |||||||||||||||| |||||||| || |  |||| ||||||||||||  ||||||||||||||||||| |||    
T  26602868 tttgtgccacgtcatctgtgaagagttaaaccgccctaactcccctcgcgaatagacacattcgccatggcgagttcgctcgccttccactcgccattgc 26602967  T
Q  256 gagttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
     |||||  |||||| | |    |  ||||  || ||||||||| ||||||  |||||||||||||||||||||||||||    
T  26602968 aagttggtggcgaa-ggatctttgatgcttactagaattgctcgcctttgctgctcgccatggcgagttggaggcgagt 26603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 48346521 - 48346247
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  48346521 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 48346422  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||||||     || || |||| ||||||||||||||||||| |||||||| ||||    
T  48346421 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgag-----tccttcgccacggcgagtaagctcgccttctactcgccattgcg 48346327  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  48346326 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 48346247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 48352905 - 48352631
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  48352905 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 48352806  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||||||     || || |||| ||||||||||||||||||| |||||||| ||||    
T  48352805 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgag-----tccttcgccacggcgagtaagctcgccttctactcgccattgcg 48352711  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  48352710 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 48352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 37026511 - 37026673
Alignment:
Q  70 gctatttatagaa-ttctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgt 168  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||| |||||| ||  |||||||| ||||||||||||||||||||    
T  37026511 gctatttatagaaattctaattctgtatcaactcgcctcgcgagctccttcattcgccagggcgag-tgcagttccttcaccattgggtttgtgccacgt 37026609  T
Q  169 cagctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    |||||||||| || |||| |||||||||||||||||||||||| ||||  | ||||||||||||    
T  37026610 cagctgtgagaagcctaagccgccctaactcgcctcgcgagtacattccctcgccatggcgagt 37026673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 215
Target Start/End: Complemental strand, 22853703 - 22853497
Alignment:
Q  10 aagaatattacaagtgaaaaactatgaaaaactaagataaaactaagt---atggttgagtgggctatttatagaattctgactctgtatcaactcgcct 106  Q
    ||||||||||||||||||||||||||||||||| ||      |||| |   ||| |||| || |||||||||| |||| | | |||| ||||||||||||    
T  22853703 aagaatattacaagtgaaaaactatgaaaaactcagtgtc--ctaaatgaaatgattgaatgagctatttataaaattttaattctgcatcaactcgcct 22853606  T
Q  107 cgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgag-aggctaaaccgccctaactcgcctcgc 205  Q
    ||||||||| ||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  22853605 cgcgagctccttcattcgccagggcgag-tgaagttccttcaccattgggtttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgc 22853507  T
Q  206 gagtaaattc 215  Q
    ||||| ||||    
T  22853506 gagtacattc 22853497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 39433693 - 39433854
Alignment:
Q  70 gctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtc 169  Q
    ||||| |||||| |||| | |||||||||||||||||||||||||| ||||||||||| |||||| | | |||||||| ||||| |||||||||||||||    
T  39433693 gctatatatagacttctaattctgtatcaactcgcctcgcgagctccttcattcgccaaggcgag-taaagttccttcaccattaggtttgtgccacgtc 39433791  T
Q  170 agctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    ||||||||| || |||| |||||||||||||||||||||||| ||||  | ||||||||||||    
T  39433792 agctgtgagaagcctaagccgccctaactcgcctcgcgagtacattccctagccatggcgagt 39433854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 1948115 - 1947980
Alignment:
Q  27 aaaactatgaaaaactaagat--aaaactaagtatggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcg 124  Q
    |||| ||||||||||||||||  |||||| |  |||||||||||| |||||||||| ||||||| |||| || ||||| ||||| |||||| ||||||||    
T  1948115 aaaagtatgaaaaactaagattaaaaactgaa-atggttgagtggtctatttatagtattctgattctgcatgaactcacctcgtgagctccttcattcg 1948017  T
Q  125 ccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1948016 ccatggcgagttgaggttccttcaccattgggtttgt 1947980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 33850069 - 33849905
Alignment:
Q  68 gggctatttatagaa-ttctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 166  Q
    |||||||||||| || |||||| ||||  ||| |||||||||||||||| ||||||| |||||||||||| | |||||||| ||| ||||||||||||||    
T  33850069 gggctatttatataaattctga-tctgattcacctcgcctcgcgagctccttcattctccatggcgagtttaagttccttcaccagtgggtttgtgccac 33849971  T
Q  167 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    ||||  ||||| ||| |||  |||||||||||||||||||||||| || || | ||||||||||||    
T  33849970 gtcatttgtgaggagtctaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagt 33849905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 8184539 - 8184489
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  8184539 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 8184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 8192099 - 8192049
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  8192099 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 8192049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 37027168 - 37027217
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtga 336  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  37027168 ctggaattcctcacctttgctgctcgccatggcgagttggaggcgagtga 37027217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 15953492 - 15953539
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||    
T  15953492 ctggaattgctcgcctttgctgctcgccatggcgagttggaggcgagt 15953539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 1386075 - 1386125
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  1386075 ctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 1386125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 6020080 - 6020030
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| || |||||||||||||||||||||||    
T  6020080 ctggaattgctcgcctttgatgcttgctatggcgagttggaggcgagtgat 6020030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 22853321 - 22853274
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtga 336  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||    
T  22853321 ctggaattgctcacctttga--ctggccatggcgagttggaggcgagtga 22853274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 39434057 - 39434099
Alignment:
Q  294 tgctcacctttgaagctcgccatggcgagttggaggcgagtga 336  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  39434057 tgctcacctttgctgctcgccatggcgagttggaggcgagtga 39434099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 15925160 - 15925213
Alignment:
Q  281 tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    ||||| || ||||||||| ||||||  |||||||||||||||||||||||||||    
T  15925160 tgctcactagaattgctcgcctttgctgctcgccatggcgagttggaggcgagt 15925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 33850132 - 33850096
Alignment:
Q  15 tattacaagtgaaaaactatgaaaaactaagataaaa 51  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  33850132 tattacacgtgaaaaactatgaaaaactgagataaaa 33850096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 45434369 - 45434413
Alignment:
Q  68 gggctatttatagaattctgactctgtatcaactcgcctcgcgag 112  Q
    ||||||||||||||||||| | |||| || |||||||||||||||    
T  45434369 gggctatttatagaattcttaatctgcataaactcgcctcgcgag 45434413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 11583 - 11304
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| | | ||| ||||||||||||||||||||| ||||||||| ||| |||||    
T  11583 atggttgagtgggctatttatagaattctgattctgcatcaactcgcctcacaaactccttcattcgccatggcgagttgtggttccttcaccagtgggt 11484  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccatgcga 257  Q
    || ||||||||||  |||||   | ||||||||||||||| |||| ||||||| || |||| |||||||||| || ||||||||||||||||||||||||    
T  11483 ttatgccacgtcatatgtgaagagttaaaccgccctaacttgccttgcgagtacatccattcgccatggcgactatgctcgccttccactcgccatgcga 11384  T
Q  258 gttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11383 gttgagggcgaatgaaaaactggtgctccctggaattgctcgcctttgaagctcgccatggcgagttggaggcgagtgat 11304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 2e-90; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 4737818 - 4737539
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4737818 atggttgagtgggctatttatataattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 4737719  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||  |||||||||||||| |||| ||||    
T  4737718 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactagccattgcg 4737619  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  4737618 agttggtggcgaa-ggatctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 4737539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 61 - 253
Target Start/End: Complemental strand, 34710993 - 34710801
Alignment:
Q  61 gttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttg 160  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34710993 gttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttg 34710894  T
Q  161 tgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| | | || | ||||||||||||||||||||||||||||||||||    
T  34710893 tgccacgtcagctgtgagaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgccat 34710801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 32327920 - 32327641
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32327920 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 32327821  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||| | |  | | ||||||||||||||||||||||||||||||||| ||||    
T  32327820 ttgtgccacgtcagctgtaagaggctaaaccgccttcactcgcctcgcgagtcattctactcgccatggcgagtaagctcgccttccactcgccattgcg 32327721  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  32327720 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 32327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 4187480 - 4187684
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||||   |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  4187480 atggttgagtgggctatttatagaattctgattctgtcctaactcgcctcgcgagctccttcattcaccatggcgagttgaagttccttcgccattgggt 4187579  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||||||||||||||||||||||| ||||    
T  4187580 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgccattgcg 4187679  T
Q  257 agttg 261  Q
    |||||    
T  4187680 agttg 4187684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 62 - 337
Target Start/End: Complemental strand, 7061938 - 7061663
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||||||    
T  7061938 ttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgt 7061839  T
Q  162 gccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagtt 260  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||   | || | ||||||||||||||||||||||||||||||||| ||||||||    
T  7061838 gccacgtcagctgtgagaggctaaaccgccttcactcgcctcgcgagtccttccactcgccatggcgagtaagctcgccttccactcgccattgcgagtt 7061739  T
Q  261 gagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |  ||||  ||| |   | | |||   |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  7061738 ggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 7061663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 62 - 337
Target Start/End: Complemental strand, 7069124 - 7068849
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||||||    
T  7069124 ttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgt 7069025  T
Q  162 gccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagtt 260  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||   | || | ||||||||||||||||||||||||||||||||| ||||||||    
T  7069024 gccacgtcagctgtgagaggctaaaccgccttcactcgcctcgcgagtccttccactcgccatggcgagtaagctcgccttccactcgccattgcgagtt 7068925  T
Q  261 gagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |  ||||  ||| |   | | |||   |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  7068924 ggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 7068849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 87 - 337
Target Start/End: Complemental strand, 4668806 - 4668556
Alignment:
Q  87 gactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaa 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4668806 gactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaa 4668707  T
Q  187 ccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagggcgaatgtaaaactagtgctc 285  Q
    |||||||||||||||| |||||| | | || | ||||||||||||  |||||||||||||| |||| |||||||||  |||||| | |    |  ||||     
T  4668706 ccgccctaactcgccttgcgagtcattccactcgccatggcgagtttgctcgccttccactagccattgcgagttggtggcgaa-ggatctttgatgctt 4668608  T
Q  286 cctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
     |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  4668607 actggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 4668556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 31548690 - 31548841
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31548690 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgggctcattcattcgccatggcgagttgaggttccttcgccattgggt 31548789  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548790 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagt 31548841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 1427850 - 1427571
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  1427850 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 1427751  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  1427750 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 1427651  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  1427650 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 1427571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 4019662 - 4019383
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  4019662 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 4019563  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  4019562 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 4019463  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  4019462 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 4019383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 4026088 - 4025809
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  4026088 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 4025989  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  4025988 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 4025889  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  4025888 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 4025809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 4717967 - 4717688
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  4717967 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 4717868  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  4717867 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 4717768  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  4717767 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 4717688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 9864200 - 9863995
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||| ||| |||| |||||||||    
T  9864200 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaagtttcttccccattgggt 9864101  T
Q  158 ttgtgccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||||  |||  | ||||||||||  || ||||||||| |||||||| |||    
T  9864100 ttgtgccacgtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccatggcgaacaaactcgccttctactcgccattgc 9864001  T
Q  256 gagttg 261  Q
    ||||||    
T  9864000 gagttg 9863995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 34649595 - 34649874
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||| ||||||| ||| |||| |||||||||    
T  34649595 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggtgagttgaagtttcttccccattgggt 34649694  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  34649695 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 34649794  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  34649795 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 34649874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 34656046 - 34656325
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||||||    
T  34656046 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttctttcccattgggt 34656145  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  34656146 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 34656245  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  34656246 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 34656325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 31128726 - 31128575
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||| ||| |||| |||||||||    
T  31128726 atggttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttccttcgccatggcgagttgaagtttcttccccattgggt 31128627  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagt 209  Q
    |||||||||||||||  ||||||||||||||||| | |||||||||||||||    
T  31128626 ttgtgccacgtcagcattgagaggctaaaccgcctttactcgcctcgcgagt 31128575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 261
Target Start/End: Complemental strand, 13671249 - 13671048
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    ||||||| ||||||||||||||||| | |||| ||| ||||||||| ||||||| |||||||| ||||||||||||| |||||||| |||||||||||||    
T  13671249 ttgagtgagctatttatagaattctaaatctgcatccactcgcctcccgagctccttcattcgtcatggcgagttgaagttccttcaccattgggtttgt 13671150  T
Q  162 gccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagt 259  Q
    ||||||||| |  ||||| || ||||||||||||||||||||||||||||  | || | ||||||||||  || ||| ||||| |||||||| |||||||    
T  13671149 gccacgtcatcactgagaagcttaaaccgccctaactcgcctcgcgagtacttgcactcgccatggcgaacaaactcaccttctactcgccattgcgagt 13671050  T
Q  260 tg 261  Q
    ||    
T  13671049 tg 13671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 337
Target Start/End: Complemental strand, 21262007 - 21261731
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    |||| ||||||||||||||| |||| | |||||||| || |||||||||||||| |||||||||||||||||  ||| |||||||| ||||||||||| |    
T  21262007 ttgaatgggctatttatagatttctaaatctgtatccacccgcctcgcgagctccttcattcgccatggcgaaatgaagttccttcaccattgggtttat 21261908  T
Q  162 gccacgtcagctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagt 259  Q
    ||||||||| | ||||| ||  ||||||||||||||||||||||||||||  | || | ||||||||||  |  ||||||||| |||||||| || ||||    
T  21261907 gccacgtcatcagtgagaagtttaaaccgccctaactcgcctcgcgagtacttccactcgccatggcgaacatactcgccttctactcgccattgtgagt 21261808  T
Q  260 tgagggcgaatgtaaaactagt--gctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||  ||||  |||||   | ||  |||  |||||||||||| ||||||  ||||||||||||||||||||||| ||||||    
T  21261807 tggtggcg--tgtaatctttgttggct-actggaattgctcgcctttgctgctcgccatggcgagttggaggcaagtgat 21261731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 27670837 - 27670982
Alignment:
Q  70 gctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtc 169  Q
    ||||||||||||||||| | |||| ||||| ||| ||||||||||| ||||||||||| |||||| ||| |||||||| |||||||||||||||||||||    
T  27670837 gctatttatagaattctaattctgcatcaaatcgtctcgcgagctccttcattcgccagggcgag-tgaagttccttcaccattgggtttgtgccacgtc 27670935  T
Q  170 agctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattc 215  Q
    ||| ||||| || |||| |||||||||||||||||||||||| ||||    
T  27670936 agccgtgagaagcctaagccgccctaactcgcctcgcgagtacattc 27670982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 292
Target Start/End: Complemental strand, 1166891 - 1166694
Alignment:
Q  95 atcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgccct 193  Q
    ||||||||||||||||||    ||||||| || ||||||||||||||| |||| ||| |||||||||| ||||||| || ||| |||  | | |||||||    
T  1166891 atcaactcgcctcgcgagtagcttcattcaccttggcgagttgaggtttcttcaccagtgggtttgtgacacgtcacctctgaggagttttagccgccct 1166792  T
Q  194 aactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc-atgcgagttgagggcgaatgtaaaactagtgctccctggaa 292  Q
    |||||||||||||||||||| || |  |||| ||||||  |||||||||||| |||||  |||||||||||||||  || |||||| |||||| ||||||    
T  1166791 aactcgcctcgcgagtaaatgcactcaccattgcgagt-tgctcgccttccattcgcctttgcgagttgagggcgtgtg-aaaactggtgctctctggaa 1166694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 4668543 - 4668493
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  4668543 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 4668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 4737526 - 4737476
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  4737526 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 4737476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 31548890 - 31548940
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| || |||||||||||||||||||||||    
T  31548890 ctggaattgctcgcctttgatgcttgctatggcgagttggaggcgagtgat 31548940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 27671123 - 27671172
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtga 336  Q
    |||||||||||| ||| ||  |||||||||||||||||||||||||||||    
T  27671123 ctggaattgctcgcctgtgctgctcgccatggcgagttggaggcgagtga 27671172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 14121896 - 14121808
Alignment:
Q  122 tcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagta 210  Q
    |||||||||||||| ||| || |||| ||  ||||||| |||||||||||||   ||||| ||  ||||| || |||||||||||||||    
T  14121896 tcgccatggcgagtcgagctttcttcccctatgggtttctgccacgtcagcttgaagaggttaggccgccttagctcgcctcgcgagta 14121808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 37367749 - 37367470
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37367749 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 37367650  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||  ||||||||||||||||||| ||||    
T  37367649 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgccattgcg 37367550  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| || |||||||||||||||||||||||    
T  37367549 agttggtggcgaa-ggatctttgatgcttactggaattgctcgcctttgatgcttgctatggcgagttggaggcgagtgat 37367470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 55462211 - 55462007
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  55462211 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggt 55462112  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||    
T  55462111 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaaatcatttgccatggcgagtgggctcgccttccactcgccattgcg 55462012  T
Q  257 agttg 261  Q
    |||||    
T  55462011 agttg 55462007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 13594891 - 13595095
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13594891 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggt 13594990  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||| ||||    
T  13594991 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgccattgcg 13595090  T
Q  257 agttg 261  Q
    |||||    
T  13595091 agttg 13595095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 8104664 - 8104859
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8104664 atggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggt 8104763  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||    
T  8104764 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgccat 8104859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 58 - 332
Target Start/End: Original strand, 27591094 - 27591368
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27591094 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 27591193  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||   |||||||||||||||||| ||||    
T  27591194 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgccattgcg 27591293  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcga 332  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  27591294 agttggtggcgaa-ggatctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcga 27591368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 30239009 - 30239288
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30239009 atggttgagtgggctatttatagaattccgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 30239108  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| | | || | ||||||||||||  ||||||||||||||||||| ||||    
T  30239109 ttgtgccacgtcagctgtgagaggctaaactgccctagctcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgccattgcg 30239208  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  |||||   | | ||||  |||||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  30239209 agttggtggcg--tgtaatctttgttgctttctggaattgctcgccttttctgcttgccatggcgagttggaggcgagtgat 30239288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 58 - 332
Target Start/End: Original strand, 17457639 - 17457912
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17457639 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 17457738  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| | | || | ||||||||||||   |||||||||||||||||| ||||    
T  17457739 ttgtgccacgtcagctgtgagaggctaaaccgccct-actcgcctcgcgagtcattccactcgccatggcgagtgttctcgccttccactcgccattgcg 17457837  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcga 332  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  17457838 agttggtggcgaaag-atctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcga 17457912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 334
Target Start/End: Original strand, 7781107 - 7781384
Alignment:
Q  58 atggttgagtgggct-atttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattggg 156  Q
    |||||| |||||||| |||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  7781107 atggttaagtgggcttatttatagaattctgattctgcatcaactcgcctcacgagctccttcattcgccatggcgagttgaggttccttcaccattggg 7781206  T
Q  157 tttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    |||||||||||||| ||||||   | |||||||||||||||||| || |||||| |  |||| ||||||||||||  ||||||||||||||||||| |||    
T  7781207 tttgtgccacgtcatctgtgaagagttaaaccgccctaactcgcttcacgagtagacacattcgccatggcgagttcgctcgccttccactcgccattgc 7781306  T
Q  256 gagttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    ||||||  |||||| | |    |  |||   |||||||||||| ||||||   ||||||||||||||||||||||||||    
T  7781307 gagttggtggcgaa-ggatctttgatgcctactggaattgctcgcctttgctactcgccatggcgagttggaggcgagt 7781384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 41373781 - 41374060
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||| ||||||||||| ||| |||| |||||||||    
T  41373781 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccgtggcgagttgaagtttcttccccattgggt 41373880  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  41373881 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 41373980  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  41373981 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 41374060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 37355774 - 37355569
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  37355774 atggttgagtgggctatttatagaattctgagtctgcattcactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 37355675  T
Q  158 ttgtgccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgc 255  Q
    ||| |||| ||||||  ||||| || ||||||||||||||||||||||||||||  |||  | ||||||||||  || ||||||||| |||||||| |||    
T  37355674 ttgcgccatgtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccatggcgaacaaactcgccttctactcgccattgc 37355575  T
Q  256 gagttg 261  Q
    ||||||    
T  37355574 gagttg 37355569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 16406132 - 16406281
Alignment:
Q  62 ttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgt 161  Q
    ||||||| ||||||||||||||||| | | || ||| ||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||    
T  16406132 ttgagtgagctatttatagaattctaaatttgcatccactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattgggtttgt 16406231  T
Q  162 gccacgtcagctgtgagaggc-taaaccgccctaactcgcctcgcgagta 210  Q
    ||||||||| | |||||| || |||||||||||||||||||||| |||||    
T  16406232 gccacgtcatcagtgagaagcttaaaccgccctaactcgcctcgtgagta 16406281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 267
Target Start/End: Complemental strand, 5659939 - 5659761
Alignment:
Q  90 tctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgag-aggctaaacc 188  Q
    |||| ||||||||||||||||||    |||||| ||| ||||||||| |||||||||| ||| | ||||||||||||||||  | |||| ||  |   ||    
T  5659939 tctgcatcaactcgcctcgcgagtaacttcatttgccttggcgagttaaggttccttcaccagtaggtttgtgccacgtcacttttgaggagttttggcc 5659840  T
Q  189 gccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcc-atgcgagttgagggcg 267  Q
     |||||||||||||||||||||||| |||||||||| ||||||  |||||||||||| |||||  |||||||||||||||    
T  5659839 accctaactcgcctcgcgagtaaatgcatttgccattgcgagt-tgctcgccttccattcgcctttgcgagttgagggcg 5659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 30210947 - 30210841
Alignment:
Q  96 tcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgcccta 194  Q
    ||||||||||||||||| || |||||||||||||||||||| | |||||||| ||| | |||||||||||||||| |||||| ||| |||  ||||||||    
T  30210947 tcaactcgcctcgcgagttccttcattcgccatggcgagtttaagttccttcaccagtaggtttgtgccacgtcatctgtgaggagtctaggccgcccta 30210848  T
Q  195 actcgcc 201  Q
    |||||||    
T  30210847 actcgcc 30210841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 36754233 - 36754132
Alignment:
Q  69 ggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgt 168  Q
    |||||||||||||||||    ||||  ||||||||||||| |||    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  36754233 ggctatttatagaattcctgttctgcctcaactcgcctcgtgagtaacttcattcgccatggcgagttgaggttacttcaccagtgggtttgtgccacgt 36754134  T
Q  169 ca 170  Q
    ||    
T  36754133 ca 36754132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 27591386 - 27591436
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  27591386 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 27591436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 17457930 - 17457980
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||| | ||| ||||||||||||||||||||||||||    
T  17457930 ctggaattgctcgcctttaatgcttgccatggcgagttggaggcgagtgat 17457980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 40976021 - 40975903
Alignment:
Q  122 tcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgc 221  Q
    ||||||||| |||||||| || |||  ||| ||| ||| ||||||||||||| | || |  ||  ||||| ||||||||||||||||||| || | | ||    
T  40976021 tcgccatggtgagttgagctttctttcccagtggatttctgccacgtcagctttaagggattaggccgccttaactcgcctcgcgagtaattttactcgc 40975922  T
Q  222 catggcgagtaagctcgcc 240  Q
    |||||| ||| ||||||||    
T  40975921 catggcaagttagctcgcc 40975903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 58 - 332
Target Start/End: Complemental strand, 36425168 - 36424894
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36425168 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 36425069  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | ||||||||||||   |||||||||||||||||| ||||    
T  36425068 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgccattgcg 36424969  T
Q  257 agttgagggcgaatgtaaaactagtgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcga 332  Q
    |||||  |||||| | |    |  ||||  |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  36424968 agttggtggcgaaag-atctttgatgcttactggaattgctcgcctttgatgcttgccatggcgagttggaggcga 36424894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 36021175 - 36020896
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36021175 atggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcatttgccatggcgagttgaggttccttcgccattgggt 36021076  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||| | | || | ||||||||||||||||||||||||||||||||| ||||    
T  36021075 ttgtgccacgtcagctgtaagaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgccattgcg 36020976  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  36020975 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 36020896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 6464003 - 6463724
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  6464003 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 6463904  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  6463903 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 6463804  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  6463803 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 6463724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 7312142 - 7312346
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  7312142 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 7312241  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  7312242 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 7312341  T
Q  257 agttg 261  Q
    |||||    
T  7312342 agttg 7312346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 11357611 - 11357467
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||| ||||||||||||||||||| |||| ||  ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11357611 atggttgagtgagctatttatagaattctgagtctgcattcactcgcctcgcgagctacttcattcgccatggcgagttgaggttccttcgccattgggt 11357512  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcct 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11357511 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcct 11357467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 8012747 - 8012468
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||| ||||||||||||||| ||| |||| |||||||||    
T  8012747 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcatttgccatggcgagttgaagtttcttccccattgggt 8012648  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  8012647 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 8012548  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  8012547 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 8012468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 36004911 - 36004632
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  36004911 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 36004812  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| ||||| || ||||    
T  36004811 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgtcattgcg 36004712  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  36004711 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 36004632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 13 - 261
Target Start/End: Complemental strand, 16710163 - 16709904
Alignment:
Q  13 aatattacaagtgaaaaactatgaaaaactaagataaaactaagt---------atggttgagtgggctatttatagaattctgactctgtatcaactcg 103  Q
    ||||||||||||||||||||| || ||||||||||||||||||||         ||||||||||||||||||||||||||||||| | || ||  |||||    
T  16710163 aatattacaagtgaaaaactaagagaaactaagataaaactaagtttttttgaaatggttgagtgggctatttatagaattctgagtatgcattcactcg 16710064  T
Q  104 cctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggc-taaaccgccctaactcgcct 202  Q
    |||||||||||  |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||||||    
T  16710063 cctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccacgtcagcaatgagaagcttaaaccgccctaactcgcct 16709964  T
Q  203 cgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttg 261  Q
    ||||||||  |||  | |||| |||||  || ||||||||| |||||||| |||||||||    
T  16709963 cgcgagtactttccctcgccacggcgaacaaactcgccttctactcgccattgcgagttg 16709904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 36076760 - 36077039
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||| |||||||||||||| ||| ||||  ||||||||    
T  36076760 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcaccatggcgagttgaagtttcttcctcattgggt 36076859  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  36076860 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 36076959  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  36076960 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 36077039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 336
Target Start/End: Original strand, 1238942 - 1239273
Alignment:
Q  13 aatattacaagtgaaaaactatgaaaaactaagataaaa-ctaagt---------atggttgagtgggctatttatagaattctgactctgtatcaactc 102  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |         ||| |||| ||||||||||||||| |||| | ||||| || ||||    
T  1238942 aatattacaagtgaaaa-ctatgaaaaactaagataaaaactaactcccaaagaaatgattgaatgggctatttatagagttctaaatctgtgtctactc 1239040  T
Q  103 gcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggct-aaaccgccctaactcgcc 201  Q
    ||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||||| | |||| | ||| |||||||| |||||||||    
T  1239041 gcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtcatcagtgaaaagcttaaaccgccttaactcgcc 1239140  T
Q  202 tcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgccat-gcgagttgagggcgaatgtaaaactagtgctccctggaattgctcac 300  Q
    |||||||||  |||| | ||||||||||  |  ||||||||| |||| |||| ||||||||  ||||  || |   ||  || |  |||||||||||| |    
T  1239141 tcgcgagtactttcactcgccatggcgaacatactcgccttctactcaccattgcgagttggtggcgcgtg-atctctgttggttactggaattgctcgc 1239239  T
Q  301 ctttgaagctcgccatggcgagttggaggcgagtga 336  Q
    ||||||  || |||||||||||||||||||||||||    
T  1239240 ctttga--ctggccatggcgagttggaggcgagtga 1239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 12769713 - 12769855
Alignment:
Q  90 tctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagagg-ctaaacc 188  Q
    |||| ||| |||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  12769713 tctgcatccactcacctcgcgagctccttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtcatctgtgagaggcctaaacc 12769812  T
Q  189 gccctaactcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
     |||||||||||||||||||||  |||| | ||||| ||||||    
T  12769813 accctaactcgcctcgcgagtactttcactcgccattgcgagt 12769855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 15013211 - 15013343
Alignment:
Q  96 tcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgcccta 194  Q
    |||||||||||||||||||| |||||||||||||||||||| |  ||||||| ||| |||||||||||||||||| |||||| ||| ||| |||||||||    
T  15013211 tcaactcgcctcgcgagctccttcattcgccatggcgagtttaaattccttcaccagtgggtttgtgccacgtcatctgtgaggagtctagaccgcccta 15013310  T
Q  195 actcgcctcgcgagtaaattcatttgccatggc 227  Q
    ||||||||||| |||| || || | ||||||||    
T  15013311 actcgcctcgcaagtacatgcactcgccatggc 15013343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 45067854 - 45067692
Alignment:
Q  68 gggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacg 167  Q
    ||||||||||||||||||| | |||  ||||||||||||||||||    | |||||||||||||||||||| ||| |||| |||||  ||||| ||||||    
T  45067854 gggctatttatagaattcttaatctacatcaactcgcctcgcgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacg 45067755  T
Q  168 tcagctgtgag-aggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcga 229  Q
    ||| |  |||| ||  ||  |||||||||||||||||||||||||||||| | ||||||||||    
T  45067754 tcacccttgagaagtttaggccgccctaactcgcctcgcgagtaaattcactcgccatggcga 45067692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 12769882 - 12769932
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  12769882 ctggaattgctcgcctttgatgctcgccatggcgagttggaggcgaatgat 12769932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 36424876 - 36424826
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  36424876 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 36424826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 15013432 - 15013507
Alignment:
Q  153 tgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggc 227  Q
    |||||||||||||||||| |||||| ||| ||| |||||||||||||||||||| |||| || || | ||||||||    
T  15013432 tgggtttgtgccacgtcatctgtgaggagtctagaccgccctaactcgcctcgcaagtacatgcactcgccatggc 15013507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 7312371 - 7312418
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagt 334  Q
    |||||||||||| ||||||  ||| |||||||||||||||||||||||    
T  7312371 ctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagt 7312418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 87 - 337
Target Start/End: Original strand, 8605 - 8855
Alignment:
Q  87 gactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaa 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8605 gactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaa 8704  T
Q  187 ccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcgagttgagggcgaatgtaaaactagtgctc 285  Q
    |||||||||||||||| |||||| | | || | ||||||||||||  |||||||||||||| |||| |||||||||  |||||| | |    |  ||||     
T  8705 ccgccctaactcgccttgcgagtcattccactcgccatggcgagtttgctcgccttccactagccattgcgagttggtggcgaa-ggatctttgatgctt 8803  T
Q  286 cctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
     |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  8804 actggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 8868 - 8918
Alignment:
Q  287 ctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  8868 ctggaattgctcgcctttgatgcttgccatggcgagttggaggcgagtgat 8918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 4432 - 4153
Alignment:
Q  58 atggttgagtgggctatttatagaattctgactctgtatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggt 157  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||||  |||||||||||||||||||||| ||| |||| |||||||||    
T  4432 atggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggt 4333  T
Q  158 ttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgccatggcgagtaagctcgccttccactcgcca-tgcg 256  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||   | |||| |||||||||||||||||||||||| |||||||| ||||    
T  4332 ttgtgccacgtcagcatttagaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgccattgcg 4233  T
Q  257 agttgagggcgaatgtaaaactag-tgctccctggaattgctcacctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    |||||  ||||  ||| |   | | |||   |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  4232 agttggtggcg--tgtgatctttgttgcattctggaattgctcgcctttgctgcttgccatggcgagttggaggcgagtgat 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 15980 - 16116
Alignment:
Q  96 tcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaaccgcccta 194  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||| |||| | ||| |||  ||||||||    
T  15980 tcaactcgcctcgcgagctccttcattcgccatggcgagttgaagttccttcaccagtgggtttgtgccacgtcatctgtaaggagtctaggccgcccta 16079  T
Q  195 actcgcctcgcgagtaaattcatttgccatggcgagt 231  Q
    |||||||||||||||| || || | ||||||||||||    
T  16080 actcgcctcgcgagtacatgcactcgccatggcgagt 16116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 3501 - 3604
Alignment:
Q  112 gctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgag-aggctaaaccgccctaactcgcctcgcgagta 210  Q
    |||| ||||||||||| ||||||| || |||||||| |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| |||    
T  3501 gctccttcattcgccagggcgagt-gaagttccttcaccattgggtttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgggta 3599  T
Q  211 aattc 215  Q
     ||||    
T  3600 cattc 3604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 3442 - 3486
Alignment:
Q  71 ctatttatagaattctgactctgtatcaactcgcctcgcgagctc 115  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||    
T  3442 ctatttatagaattctaattctatatcaactcgcctcgcgagctc 3486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 3836 - 3878
Alignment:
Q  294 tgctcacctttgaagctcgccatggcgagttggaggcgagtga 336  Q
    ||||||||||||   ||||||||||||||||||||||||||||    
T  3836 tgctcacctttgctactcgccatggcgagttggaggcgagtga 3878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 1478 - 1346
Alignment:
Q  122 tcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtgagaggctaaaccgccctaactcgcctcgcgagtaaattcatttgc 221  Q
    |||||||||||||||||| || |||  ||| ||||||| ||||||||||| | |||| |  ||  ||||| ||||||||||||||||||| ||   | ||    
T  1478 tcgccatggcgagttgagctttctttaccagtgggtttctgccacgtcagatttgagggattaggccgccttaactcgcctcgcgagtaattttgctcgc 1379  T
Q  222 catggcgagtaagctcgccttccactcgccatg 254  Q
    |||||| ||| |||||||| |  ||||||||||    
T  1378 catggctagttagctcgccatgaactcgccatg 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 11551 - 11514
Alignment:
Q  300 cctttgaagctcgccatggcgagttggaggcgagtgat 337  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11551 cctttgatgcttgccatggcgagttggaggcgagtgat 11514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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