View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6981_low_16 (Length: 334)
Name: NF6981_low_16
Description: NF6981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6981_low_16 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 24 - 317
Target Start/End: Complemental strand, 827537 - 827244
Alignment:
| Q |
24 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
827537 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactc |
827438 |
T |
|
| Q |
124 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacag |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
827437 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacag |
827338 |
T |
|
| Q |
224 |
aatggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatgtc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
827337 |
aatggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttcagacatatggcctagtctttgatgtc |
827244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 315
Target Start/End: Original strand, 9442353 - 9442642
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9442353 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactccc |
9442452 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
9442453 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacagaa |
9442552 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9442553 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttcagacatatggcctagtctttgatg |
9442642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 26 - 307
Target Start/End: Original strand, 24596749 - 24597030
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || | |||||||| |||||||| || | | |||||||||||| ||||||| ||||||||||| |
|
|
| T |
24596749 |
gacttcttcttgattgggtacacccataatctcctagagtgatcatcaataaatgacacaaaatgttttgctcctcccatggatatttgtggtgactccc |
24596848 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
24596849 |
acacatcagaatgtatcaagtcaagtatgtatttgcttctagtagttactctggaaaacttcaatctatgttgcttgcttgtcacacagtgctcacagaa |
24596948 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagt |
307 |
Q |
| |
|
| ||||| |||||||||||||| | || ||||| ||||| |||| ||||||| |||||||| || |||||||||||| |
|
|
| T |
24596949 |
agacaaattcactgtcttgagcccaggtagaagattttgttcctcaagagctttcaaaccacgttccgatatatggcctagt |
24597030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 315
Target Start/End: Original strand, 27876970 - 27877259
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27876970 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactccc |
27877069 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
27877070 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacagaa |
27877169 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27877170 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttcagacatatggcctagtctttgatg |
27877259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 315
Target Start/End: Complemental strand, 42267959 - 42267670
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
42267959 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactccc |
42267860 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
42267859 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacagaa |
42267760 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42267759 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttcagacatatggcctagtctttgatg |
42267670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 315
Target Start/End: Original strand, 48700082 - 48700371
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
48700082 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactccc |
48700181 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
48700182 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacagaa |
48700281 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
48700282 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttcagacatatggcctagtctttgatg |
48700371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 24 - 315
Target Start/End: Original strand, 30948442 - 30948733
Alignment:
| Q |
24 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
30948442 |
ccgacttcttcttgattgggtacacccataatcttctagaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattttggtgactc |
30948541 |
T |
|
| Q |
124 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacag |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
30948542 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacag |
30948641 |
T |
|
| Q |
224 |
aatggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30948642 |
aatggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
30948733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 26 - 307
Target Start/End: Complemental strand, 2000941 - 2000660
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || | ||||||||| |||||||| || ||| |||||||||||| ||||||| ||| ||||||| |
|
|
| T |
2000941 |
gacttcttcttgattgggtacacccataatctcctagagtggtcatcaataaatgacacaaaatattttgctcctcccatggatatttgtggcgactccc |
2000842 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
2000841 |
acacatcagaatgtattaagtcaagtatgtatttgcttctagtagttactatagaaaacttcaatctatgttgcttgcttgtcacacagtgctcacagaa |
2000742 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagt |
307 |
Q |
| |
|
| ||||| | |||||||||||| | || ||||| ||||| |||| ||||||| ||| |||| ||||||||||||||| |
|
|
| T |
2000741 |
agacaaattcattgtcttgagcccaggtagaagattttgttccgcaagagctttcaaaccatgttccgacatatggcctagt |
2000660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 315
Target Start/End: Original strand, 5821536 - 5821825
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5821536 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactccc |
5821635 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
5821636 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacagaa |
5821735 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5821736 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttcagacatatggcctagtctttgatg |
5821825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 26 - 315
Target Start/End: Original strand, 2815524 - 2815813
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2815524 |
gacttcttcttgattggttacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagataattctggtgactccc |
2815623 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |
|
|
| T |
2815624 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacaaaa |
2815723 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2815724 |
tggtaaatttactgaattgagcccgtgaaggagattgcgttccgcaaggactttcaagccacgttatgacatatggcctagtctttgatg |
2815813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 26 - 307
Target Start/End: Complemental strand, 42587007 - 42586726
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || | |||||||| |||||||| || ||| |||||||||||| ||||||| ||||||||||| |
|
|
| T |
42587007 |
gacttcttcttgattgggtacacccataatctcctagagtgatcatcaataaatgacacaaaatattttgctcctcccatggatatttgtggtgactccc |
42586908 |
T |
|
| Q |
126 |
acacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacagaa |
225 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
42586907 |
acacatcagaatgtatcaagtcaagtatgtatttgcttctagtagttactctggaaaacttcaatctatgttgcttgcttgtcacacagtgctcacagaa |
42586808 |
T |
|
| Q |
226 |
tggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagt |
307 |
Q |
| |
|
| ||||| | |||||||||||| | || ||||| ||||| |||| ||||||| |||||||| ||||||||||||||| |
|
|
| T |
42586807 |
agacaaattcattgtcttgagcccaggtagaagattttgttccgcaagagctttcaaaccacgttccgacatatggcctagt |
42586726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 24 - 315
Target Start/End: Complemental strand, 34354068 - 34353777
Alignment:
| Q |
24 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34354068 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactc |
34353969 |
T |
|
| Q |
124 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacag |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
34353968 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttttagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacaa |
34353869 |
T |
|
| Q |
224 |
aatggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34353868 |
aatggtaaatttactgccttgagcccgtgaaggagattgcgttcagcaaggactttcaagccacgttctgacatatggcctagtctttgatg |
34353777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 24 - 315
Target Start/End: Complemental strand, 41720468 - 41720177
Alignment:
| Q |
24 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
41720468 |
ccgacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacaaaatatcttgctcctcctagagatatttctggtgactc |
41720369 |
T |
|
| Q |
124 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctcacag |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
41720368 |
ccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctcacaa |
41720269 |
T |
|
| Q |
224 |
aatggtaaatttactgtcttgagcccgtgaaggagattgcgttccacaaggactttcaagccacgttctgacatatggcctagtctttgatg |
315 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41720268 |
aatggtaaatttactgccttgagcccgtgaaggagattgcgttccgcaaggactttcaagccacgttctgacatatggcctagtctttgatg |
41720177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 120 - 307
Target Start/End: Original strand, 8136818 - 8137007
Alignment:
| Q |
120 |
actcccacacatcagaatgtatcaagtctagtatgtgtttgcttctagtagttactctagcaaacttcaatctatgttgcttactcatcacacagtgctc |
219 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
8136818 |
actcccacacatcataatggatcaagtctagtatatgtttgcttctagtagttactctagcaaacttcaatctatgttgcttgcttatcacacagtgctc |
8136917 |
T |
|
| Q |
220 |
acagaatggtaaatttactgtcttgagcccgtg-aaggagattgcgttccac-aaggactttcaagccacgttctgacatatggcctagt |
307 |
Q |
| |
|
|||||||||||| ||||| ||||| |||| ||| |||||||||||||||| | ||| | |||| |||||| |||| | |||||||||||| |
|
|
| T |
8136918 |
acagaatggtaagtttaccgtcttcagcctgtgaaaggagattgcgttccgcaaagaaatttccagccacattctaatatatggcctagt |
8137007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 8134808 - 8134907
Alignment:
| Q |
26 |
gacttcttcttgattgggtacacccataatcttctggaatagtcatcaatgaatgacacgaagtatcttgctcctcccagagatatttctggtgactccc |
125 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8134808 |
gacttcttcttaattgggtacacccataatcttctggaatagtaatcaatgaatgagacgaaatatcttgcccctcccagagatatttctggtgactccc |
8134907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University