View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6982_high_15 (Length: 225)
Name: NF6982_high_15
Description: NF6982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6982_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 29335709 - 29335513
Alignment:
| Q |
14 |
catctttttcactgctggacatatttagtgaattagctttaattaatcatgaaaccaatttttgatcttgaagtagaggccacagaagaatatgaatctg |
113 |
Q |
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| T |
29335709 |
catctttttcactgctggacatatttagtgaattagctttaattaatcatgaaaccaatttttgatcttgaagtagaggccacagaagaatatgaatctg |
29335610 |
T |
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| Q |
114 |
atgttagtagccatgttgcttccactatatccacccaccaaattgaaacctctccaggttcctatagtaacagcctttccaattcagatttcatctc |
210 |
Q |
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| T |
29335609 |
atgttagtagccatgttgcttccactatatccacccaccaaattgaaacctctacaggttcctatagtaacagcctttccaattcagattccatctc |
29335513 |
T |
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