View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6983_low_11 (Length: 397)

Name: NF6983_low_11
Description: NF6983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6983_low_11
NF6983_low_11
[»] chr7 (40 HSPs)
chr7 (13-385)||(798879-799251)
chr7 (13-385)||(16287735-16288107)
chr7 (36-382)||(9468753-9469099)
chr7 (36-382)||(30370305-30370651)
chr7 (36-382)||(16393793-16394139)
chr7 (133-385)||(16237011-16237263)
chr7 (135-385)||(15192615-15192865)
chr7 (48-385)||(29088961-29089298)
chr7 (141-385)||(2556073-2556317)
chr7 (133-385)||(25721126-25721378)
chr7 (120-385)||(1893931-1894196)
chr7 (141-385)||(5130534-5130778)
chr7 (141-385)||(10914225-10914469)
chr7 (141-385)||(2157112-2157356)
chr7 (140-385)||(16515786-16516031)
chr7 (141-385)||(2107519-2107763)
chr7 (141-385)||(5144696-5144940)
chr7 (141-385)||(11422135-11422379)
chr7 (141-385)||(4201927-4202171)
chr7 (140-385)||(10843350-10843595)
chr7 (273-385)||(10844291-10844403)
chr7 (141-385)||(24589890-24590134)
chr7 (141-358)||(9621188-9621405)
chr7 (295-385)||(25726189-25726279)
chr7 (141-385)||(26515330-26515574)
chr7 (141-385)||(31561746-31561990)
chr7 (273-385)||(16043989-16044101)
chr7 (273-385)||(16447362-16447474)
chr7 (141-245)||(26667410-26667514)
chr7 (141-358)||(16748900-16749117)
chr7 (141-358)||(17526072-17526289)
chr7 (141-358)||(17526925-17527142)
chr7 (141-245)||(16733957-16734061)
chr7 (141-205)||(11443425-11443489)
chr7 (141-205)||(26437795-26437859)
chr7 (141-245)||(45389758-45389862)
chr7 (159-385)||(3447862-3448088)
chr7 (159-205)||(26317384-26317430)
chr7 (165-385)||(4142602-4142822)
chr7 (165-385)||(26272442-26272662)
[»] chr5 (54 HSPs)
chr5 (13-385)||(34468042-34468414)
chr5 (36-382)||(36376333-36376679)
chr5 (36-382)||(37000987-37001333)
chr5 (36-382)||(5440596-5440942)
chr5 (36-382)||(31519750-31520096)
chr5 (36-382)||(15785096-15785442)
chr5 (36-382)||(11944785-11945131)
chr5 (36-382)||(17956539-17956885)
chr5 (141-385)||(3484571-3484815)
chr5 (120-385)||(20389357-20389622)
chr5 (131-385)||(352583-352837)
chr5 (140-385)||(24972453-24972698)
chr5 (141-385)||(30937184-30937428)
chr5 (141-385)||(28651790-28652034)
chr5 (141-385)||(43080803-43081047)
chr5 (141-385)||(11551903-11552147)
chr5 (141-385)||(22996485-22996729)
chr5 (141-385)||(33780037-33780281)
chr5 (141-385)||(41677253-41677497)
chr5 (141-385)||(28957153-28957397)
chr5 (141-385)||(23628517-23628762)
chr5 (141-385)||(15656126-15656370)
chr5 (141-385)||(3792089-3792333)
chr5 (141-385)||(24685513-24685757)
chr5 (141-385)||(33295076-33295320)
chr5 (141-385)||(34619066-34619310)
chr5 (141-382)||(37757531-37757772)
chr5 (141-385)||(5640336-5640580)
chr5 (141-385)||(6876853-6877097)
chr5 (141-245)||(15756360-15756464)
chr5 (141-245)||(30031976-30032080)
chr5 (141-245)||(33518928-33519032)
chr5 (159-385)||(8662843-8663069)
chr5 (141-358)||(26482942-26483159)
chr5 (141-385)||(13322198-13322442)
chr5 (141-385)||(31823775-31824019)
chr5 (141-385)||(40470918-40471162)
chr5 (141-385)||(18372902-18373146)
chr5 (141-245)||(30154579-30154683)
chr5 (159-385)||(2513628-2513854)
chr5 (141-385)||(24726517-24726761)
chr5 (165-385)||(30171041-30171261)
chr5 (141-245)||(31434012-31434116)
chr5 (141-385)||(37668854-37669098)
chr5 (141-382)||(37768362-37768603)
chr5 (273-385)||(23894886-23894998)
chr5 (141-205)||(24683990-24684054)
chr5 (273-385)||(25202958-25203070)
chr5 (273-385)||(25267113-25267225)
chr5 (141-205)||(32593822-32593886)
chr5 (141-245)||(37356151-37356255)
chr5 (159-325)||(12134741-12134907)
chr5 (159-205)||(9320042-9320088)
chr5 (141-205)||(18498273-18498337)
[»] chr3 (63 HSPs)
chr3 (13-385)||(20442491-20442863)
chr3 (13-385)||(41439617-41439989)
chr3 (29-385)||(15917907-15918263)
chr3 (29-385)||(15593425-15593781)
chr3 (36-382)||(5951319-5951665)
chr3 (36-382)||(46379731-46380077)
chr3 (135-385)||(11925872-11926122)
chr3 (135-385)||(22958949-22959199)
chr3 (135-385)||(16430901-16431151)
chr3 (141-385)||(24209088-24209332)
chr3 (48-385)||(15703882-15704219)
chr3 (120-385)||(4442573-4442838)
chr3 (133-385)||(7089541-7089793)
chr3 (48-385)||(6570763-6571100)
chr3 (131-385)||(6963947-6964201)
chr3 (159-385)||(8298491-8298717)
chr3 (141-385)||(18053764-18054008)
chr3 (141-385)||(7075708-7075952)
chr3 (141-385)||(10398646-10398890)
chr3 (141-385)||(18274566-18274810)
chr3 (141-385)||(18289867-18290111)
chr3 (141-385)||(18305168-18305412)
chr3 (141-385)||(22385092-22385336)
chr3 (141-385)||(29146270-29146514)
chr3 (141-385)||(35883268-35883512)
chr3 (159-385)||(4724151-4724377)
chr3 (164-385)||(8286984-8287205)
chr3 (140-385)||(18532884-18533129)
chr3 (141-385)||(4794149-4794393)
chr3 (141-385)||(6540256-6540500)
chr3 (141-385)||(15738608-15738852)
chr3 (140-380)||(15890224-15890464)
chr3 (141-385)||(20068542-20068786)
chr3 (141-385)||(32441653-32441897)
chr3 (141-385)||(48468429-48468673)
chr3 (141-385)||(5606828-5607072)
chr3 (141-385)||(6204405-6204649)
chr3 (141-385)||(29662484-29662728)
chr3 (141-245)||(17982603-17982707)
chr3 (141-245)||(18227698-18227802)
chr3 (141-385)||(28341679-28341923)
chr3 (222-385)||(18333213-18333376)
chr3 (141-244)||(24330665-24330768)
chr3 (141-385)||(8214237-8214481)
chr3 (141-385)||(11107866-11108110)
chr3 (141-385)||(18245243-18245487)
chr3 (141-385)||(20574357-20574601)
chr3 (141-385)||(22868362-22868606)
chr3 (141-385)||(22883421-22883665)
chr3 (141-385)||(31961969-31962213)
chr3 (141-385)||(47025955-47026199)
chr3 (141-385)||(51784525-51784769)
chr3 (141-385)||(4419417-4419661)
chr3 (141-385)||(10645575-10645819)
chr3 (159-385)||(7999080-7999306)
chr3 (141-382)||(5593874-5594115)
chr3 (141-385)||(4344190-4344434)
chr3 (141-382)||(5469490-5469731)
chr3 (141-385)||(28023784-28024028)
chr3 (141-245)||(5016216-5016320)
chr3 (159-385)||(16622004-16622230)
chr3 (141-208)||(28113645-28113712)
chr3 (273-385)||(21677337-21677449)
[»] chr2 (31 HSPs)
chr2 (120-385)||(21761075-21761340)
chr2 (36-358)||(12383095-12383417)
chr2 (36-382)||(22948828-22949174)
chr2 (135-385)||(34700610-34700860)
chr2 (133-385)||(42393067-42393319)
chr2 (120-385)||(26724736-26725001)
chr2 (120-385)||(34534903-34535168)
chr2 (141-385)||(23126028-23126272)
chr2 (141-385)||(28884747-28884991)
chr2 (159-385)||(27431901-27432127)
chr2 (140-385)||(19453883-19454128)
chr2 (141-385)||(13934007-13934251)
chr2 (141-385)||(20840453-20840697)
chr2 (141-385)||(12658076-12658320)
chr2 (141-245)||(16826938-16827042)
chr2 (141-245)||(16894438-16894542)
chr2 (141-245)||(19414101-19414205)
chr2 (141-245)||(32052343-32052447)
chr2 (141-245)||(39892609-39892713)
chr2 (159-385)||(21674635-21674861)
chr2 (141-385)||(9347446-9347690)
chr2 (13-62)||(21761358-21761407)
chr2 (141-385)||(21700630-21700874)
chr2 (141-385)||(31878826-31879070)
chr2 (141-245)||(34864224-34864328)
chr2 (141-245)||(37683495-37683599)
chr2 (141-245)||(37698760-37698864)
chr2 (141-245)||(37927909-37928013)
chr2 (141-385)||(27806243-27806487)
chr2 (141-385)||(39049279-39049523)
chr2 (141-205)||(12714241-12714305)
[»] scaffold0094 (1 HSPs)
scaffold0094 (30-385)||(35711-36066)
[»] scaffold0598 (1 HSPs)
scaffold0598 (13-385)||(4670-5042)
[»] chr6 (36 HSPs)
chr6 (10-382)||(9136770-9137142)
chr6 (135-385)||(18119001-18119251)
chr6 (135-385)||(18213083-18213333)
chr6 (133-385)||(23972184-23972436)
chr6 (120-385)||(27544419-27544684)
chr6 (120-385)||(25706604-25706869)
chr6 (140-385)||(27270001-27270246)
chr6 (140-385)||(27287778-27288023)
chr6 (141-385)||(15421734-15421978)
chr6 (164-385)||(27627125-27627346)
chr6 (141-385)||(26991431-26991675)
chr6 (141-385)||(27021674-27021918)
chr6 (159-385)||(20163176-20163402)
chr6 (159-385)||(22169429-22169655)
chr6 (141-385)||(22932298-22932542)
chr6 (141-385)||(23854743-23854987)
chr6 (141-385)||(29552095-29552339)
chr6 (141-385)||(34461920-34462164)
chr6 (164-385)||(24866277-24866498)
chr6 (141-385)||(13296365-13296609)
chr6 (141-385)||(26920915-26921159)
chr6 (141-245)||(30555570-30555674)
chr6 (141-385)||(4775418-4775662)
chr6 (141-358)||(26113853-26114070)
chr6 (141-385)||(4543188-4543432)
chr6 (141-385)||(4760301-4760545)
chr6 (258-385)||(16752476-16752603)
chr6 (141-385)||(27010269-27010513)
chr6 (141-245)||(27487671-27487775)
chr6 (141-358)||(28209992-28210209)
chr6 (141-205)||(27046925-27046989)
chr6 (141-205)||(29575552-29575616)
chr6 (159-205)||(17090037-17090083)
chr6 (141-358)||(4721576-4721793)
chr6 (141-205)||(16941621-16941685)
chr6 (141-205)||(29503954-29504018)
[»] chr1 (8 HSPs)
chr1 (36-382)||(5629472-5629818)
chr1 (133-385)||(22488556-22488808)
chr1 (141-245)||(28587528-28587632)
chr1 (141-245)||(51640761-51640865)
chr1 (141-245)||(10947620-10947724)
chr1 (159-385)||(41790781-41791007)
chr1 (141-382)||(10965208-10965449)
chr1 (273-385)||(20463651-20463763)
[»] scaffold0029 (1 HSPs)
scaffold0029 (36-382)||(28606-28952)
[»] chr4 (27 HSPs)
chr4 (48-385)||(19766800-19767137)
chr4 (48-385)||(14726270-14726607)
chr4 (120-385)||(1882570-1882835)
chr4 (131-385)||(22147040-22147295)
chr4 (141-385)||(17015600-17015844)
chr4 (141-385)||(14667570-14667814)
chr4 (141-385)||(18798085-18798329)
chr4 (141-385)||(14760777-14761021)
chr4 (141-385)||(24589832-24590076)
chr4 (141-385)||(34186431-34186675)
chr4 (141-385)||(6572412-6572656)
chr4 (141-385)||(24115216-24115460)
chr4 (141-385)||(36341988-36342232)
chr4 (141-385)||(54835945-54836189)
chr4 (141-385)||(5008429-5008673)
chr4 (141-245)||(21972255-21972359)
chr4 (140-385)||(15282399-15282644)
chr4 (141-358)||(39853191-39853408)
chr4 (141-385)||(14101097-14101341)
chr4 (165-385)||(15388849-15389069)
chr4 (141-245)||(31124123-31124227)
chr4 (141-245)||(40103248-40103352)
chr4 (140-385)||(1902806-1903052)
chr4 (141-245)||(18314789-18314893)
chr4 (141-385)||(30756314-30756558)
chr4 (141-385)||(33671271-33671515)
chr4 (141-385)||(15230426-15230670)
[»] chr8 (21 HSPs)
chr8 (133-385)||(22411470-22411722)
chr8 (135-385)||(14211573-14211823)
chr8 (133-385)||(19843699-19843951)
chr8 (120-385)||(16767842-16768107)
chr8 (141-385)||(27606337-27606581)
chr8 (141-385)||(2134692-2134936)
chr8 (141-385)||(14560164-14560408)
chr8 (141-385)||(18712024-18712268)
chr8 (140-385)||(16285982-16286227)
chr8 (140-385)||(19690637-19690882)
chr8 (141-385)||(29831866-29832110)
chr8 (141-385)||(18793245-18793488)
chr8 (141-358)||(19205821-19206038)
chr8 (141-385)||(19676987-19677231)
chr8 (141-385)||(31357068-31357312)
chr8 (141-385)||(9357165-9357409)
chr8 (165-385)||(31487303-31487524)
chr8 (141-358)||(12090182-12090399)
chr8 (165-385)||(22078343-22078563)
chr8 (141-205)||(33261274-33261338)
chr8 (165-358)||(28359411-28359604)
[»] scaffold0046 (1 HSPs)
scaffold0046 (133-385)||(49689-49941)
[»] scaffold0404 (1 HSPs)
scaffold0404 (135-385)||(9753-10003)
[»] scaffold0387 (1 HSPs)
scaffold0387 (13-194)||(3310-3490)
[»] scaffold0031 (1 HSPs)
scaffold0031 (131-385)||(5386-5640)
[»] scaffold0336 (1 HSPs)
scaffold0336 (141-385)||(12112-12356)
[»] scaffold0143 (2 HSPs)
scaffold0143 (141-385)||(29834-30078)
scaffold0143 (140-385)||(18609-18855)
[»] scaffold0144 (1 HSPs)
scaffold0144 (141-385)||(23662-23906)
[»] scaffold0124 (1 HSPs)
scaffold0124 (159-385)||(33019-33244)
[»] scaffold0254 (1 HSPs)
scaffold0254 (141-385)||(15122-15366)
[»] scaffold0089 (3 HSPs)
scaffold0089 (141-385)||(44462-44706)
scaffold0089 (141-385)||(2608-2852)
scaffold0089 (141-205)||(37750-37814)
[»] scaffold0159 (2 HSPs)
scaffold0159 (141-385)||(6650-6894)
scaffold0159 (141-385)||(22137-22381)
[»] scaffold0748 (1 HSPs)
scaffold0748 (165-385)||(6142-6362)
[»] scaffold0237 (1 HSPs)
scaffold0237 (141-385)||(12399-12643)
[»] scaffold0038 (1 HSPs)
scaffold0038 (141-358)||(10490-10707)
[»] scaffold0322 (1 HSPs)
scaffold0322 (159-385)||(8604-8830)
[»] scaffold1697 (1 HSPs)
scaffold1697 (165-245)||(39-119)
[»] scaffold0415 (1 HSPs)
scaffold0415 (141-205)||(8553-8617)


Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 13 - 385
Target Start/End: Complemental strand, 799251 - 798879
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    |||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  799251 catcacttgaggtaagtgtcaagaagcgagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgagatatgccaggtctggatac 799152  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag 212  Q
    |||||| |||||||||||||||||||| ||||| || |||| ||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  799151 tgatattgtggtacaccatttgcctttgaagcccgaatgtccgccggtcaagcagaaattgagaagaacccgtcctgatatggccctcaagatcaaagag 799052  T
Q  213 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtca 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  799051 gaagtgcaaaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtgtctgttccgaagaaggatggcaaagtca 798952  T
Q  313 gaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  798951 gaatgtgtgttgattaccgtgaccttaacaaagctagtcccaaagatgattttccattacctcatattgatgt 798879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 13 - 385
Target Start/End: Complemental strand, 16288107 - 16287735
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    |||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16288107 catcacttgaggtaagtgtcaagaagcgagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgagatatgccaggtctggatac 16288008  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag 212  Q
    |||||| |||||||||||||||||||| ||||| || |||| ||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  16288007 tgatattgtggtacaccatttgcctttgaagcccgaatgtccgccggtcaagcagaaattgagaagaacccgtcctgatatggccctcaagatcaaagag 16287908  T
Q  213 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtca 312  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16287907 gaagtgcaaaaacagatcgatgcaggttttctcgttacatcaaaataccctcaatggctagccaacatagtgcctgttccgaagaaggatggcaaagtca 16287808  T
Q  313 gaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  16287807 gaatgtgtgttgattaccgtgaccttaacaaagctagtcctaaagatgatttcccattacctcatattgatgt 16287735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 36 - 382
Target Start/End: Original strand, 9468753 - 9469099
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||||||||| || |||||||| |||||||| ||  | |    
T  9468753 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccaggtctagacactgatattgtggtacatcacctac 9468852  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || ||||| |||| ||||||||| || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  9468853 ctttgaaacctgaatgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 9468952  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  9468953 tggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 9469052  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  9469053 ttaaacaaagctagcccaaaagacgactttcctttacctcatattga 9469099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 30370651 - 30370305
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  30370651 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 30370552  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || ||||| |||| ||||||||| || |||||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  30370551 ctttgaaacctgaatgtccgccagtcaaacaaaaattgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 30370452  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || ||||||||     
T  30370451 tggtttcctcatcacatcaaattacccccaatggttagctaacatagttcctgttccaaagaaagatggtaaggtcagaatgtgtgtcgactaccgtgat 30370352  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  30370351 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 30370305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 16394139 - 16393793
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||| |||| |||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  16394139 aagcaagtgatagagctcctcgaagagtatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 16394040  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || |||||||||| ||||||||| || || ||||||||||| ||||| || |||||||| || |||||||| || || |||||||||||||| ||    
T  16394039 ctttgaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgtcccgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 16393940  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| || ||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  16393939 tggtttcctcatcacatcaaattacccccagtggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 16393840  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  16393839 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 16393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 16237011 - 16237263
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| |||||||||||||  || || |||||||||||||||||| ||| ||| || ||||| || |||||||||||||||||||  |||||||| ||    
T  16237011 tgcctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcccgagatggccctcaagatcaaagaggaagtgcgcaaacagattga 16237110  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | |||||||| ||| | ||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||||||     
T  16237111 tgcaggtttcctggtcacatcagagtaccctcagtggttggccaacatagtgcccgttccaaagaaagatggcaaagtcagaatgtgtgttgattaccgg 16237210  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| |||||||||| ||||| ||||||||    
T  16237211 gacttgaacaaggctagtccgaaggataatttcccattacctcacattgatgt 16237263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 15192615 - 15192865
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| ||||    
T  15192615 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattgatg 15192714  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||    
T  15192715 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcggga 15192814  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  15192815 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 15192865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 48 - 385
Target Start/End: Original strand, 29088961 - 29089298
Alignment:
Q  48 gagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgcctttaaagcctg 147  Q
    |||||| ||| ||||||||||||| | ||||| ||||| |||   || ||||| ||||| ||  ||||| |||| | ||||    ||||||| |||||||    
T  29088961 gagcttatcagagaatatgttgatatattcgcatggtcatacaaagacatgccgggtctagaccctgatgtcgttgaacacagactgcctttgaagcctg 29089060  T
Q  148 agtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgt 247  Q
    ||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || |||||||||||||| ||    
T  29089061 agtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatgcaggtttcctagt 29089160  T
Q  248 tacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagct 347  Q
     |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||| | ||||| |||    
T  29089161 cacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgggacttgaacaaggct 29089260  T
Q  348 agtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||| || ||| |||| || |||||||| ||||||||    
T  29089261 agtccgaaggataattttcctttgcctcacattgatgt 29089298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 2556073 - 2556317
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || ||||||||||    
T  2556073 aagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatgcaggtt 2556172  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    |||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||| || ||| | ||    
T  2556173 tcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcgggacttgaa 2556272  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| |||||||| || ||| |||| || |||||||| ||||||||    
T  2556273 caaggctagtccgaaggataattttcctttgcctcacattgatgt 2556317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 25721378 - 25721126
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| ||||||||||||||  |||| |||||||||||||||||| ||| ||| |||||||| || |||||||||||| ||||||  ||  |||| ||    
T  25721378 tgcctttgaagcctgagtgtctttcagtaaagcagaaattgagaagatctcatcccgatatggccctcaagatcaaagagaaagtgcgaaagtagattga 25721279  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | || ||||| ||| | ||||||||||| || ||||| ||||| |||||||||||||||||||| || ||||||||     
T  25721278 tgcaggtttcctggtcacatcagagtatcctcagtggttggccaacatagtgcccgttccaaagaaagatggcaaagtcagaatgtgtgtggattaccgg 25721179  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| ||||||| || ||||| ||||||||    
T  25721178 gacttgaacaaggctagtccgaaggataatttccctttacctcacattgatgt 25721126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 385
Target Start/End: Complemental strand, 1894196 - 1893931
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| ||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  1894196 gtggaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 1894097  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || |||||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  1894096 gaaagcaaattgatgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 1893997  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  1893996 tgttgactatcgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 1893931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 5130534 - 5130778
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  5130534 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 5130632  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  5130633 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 5130732  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||||||||||||||||||    
T  5130733 acaaagctagtccaaaagacaactttccattgcctcatattgatgt 5130778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 10914469 - 10914225
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  10914469 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggttcaaaaacagattgatgcgggt 10914371  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  10914370 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 10914271  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  10914270 acaaagctagtccaaaagacaactttccattacctcatattgatgt 10914225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 2157112 - 2157356
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  2157112 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 2157210  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  2157211 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 2157310  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  2157311 acaaagctagtccaaaagacaactttccattacctcatattgatgt 2157356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 385
Target Start/End: Complemental strand, 16516031 - 16515786
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaag-tgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| ||| | || |||||||| ||||| ||    
T  16516031 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcaaggttcaaaaacagattgatgcggg 16515933  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | |||||     
T  16515932 tttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctg 16515833  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  16515832 aacaaagccagtccaaaagacaactttccattacctcatattgatgt 16515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 2107763 - 2107519
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||  ||||||||||| ||||| || ||| || || || ||||| || ||||| |||    
T  2107763 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatctagatatggctctcaagattaa-gagcgaggttcaaaaacaaattgatgcgggt 2107665  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  2107664 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 2107565  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  2107564 acaaagctagtccaaaagacaactttccattacctcatattgatgt 2107519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 5144940 - 5144696
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| |||||||| || |||||||| ||| ||||| || || ||||| ||||| |||    
T  5144940 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggccctcaagatcaa-gagtgaagttcaaaagcagattgatgcgggt 5144842  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || || |||||||| |||||| | ||||| ||||| | | | ||||| |    
T  5144841 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgcccaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctga 5144742  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || ||||||||||||||||||||    
T  5144741 ataaagccagtccaaaagacaactttccattgcctcatattgatgt 5144696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 11422379 - 11422135
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||| ||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  11422379 aagcctgaatgtcctcccgtcaggcagaaattaagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 11422281  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  11422280 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 11422181  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||| ||||||||    
T  11422180 acaaagctagtccaaaagacaactttccattacctcacattgatgt 11422135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 4201927 - 4202171
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||| ||||| || || || || || || ||||| |||    
T  4201927 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagatc-aagagcgaggttcaaaagcaaattgatgcgggt 4202025  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    |||||||| ||||| | || || || || ||||| |||||||||||||| |||||| | ||||||||||| | | | ||| | |    
T  4202026 ttcctcatgacagttgaataccctgaatgggttgctaatattgtgcctgtgccgaagaaggatggtaaagtccggatgtgcgttgacttcagggacttga 4202125  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  4202126 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 4202171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 385
Target Start/End: Complemental strand, 10843595 - 10843350
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggt 239  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| ||   ||| || || || ||||| ||||| |||    
T  10843595 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaagagggaggttcaaaagcagattgatgcgggt 10843496  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    || ||| | |||    | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  10843495 tttctcatgacagtcgagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctga 10843396  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  |||||||||| || |||||||||||    
T  10843395 ataaagccagtccaaaagacaatttcccattaccccatattgatgt 10843350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 10844291 - 10844403
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  |||||||||| |    
T  10844291 gccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaatttcccattac 10844390  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  10844391 ctcatattgatgt 10844403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 24590134 - 24589890
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  24590134 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 24590035  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| |||||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  24590034 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccgaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 24589935  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  24589934 caaagccagtccaaaagacaactttccattacctcatattgatgt 24589890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 9621188 - 9621405
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||| ||||| || || || || || || ||||| |||    
T  9621188 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatc-aagagcgaggttcaaaagcaaattgatgcgggt 9621286  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || ||||| || || ||||||||||| |||||| ||||||| ||||| | | | ||| | |    
T  9621287 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtaccagtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagggacttga 9621386  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  9621387 acaaagccagtccaaaaga 9621405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 25726189 - 25726279
Alignment:
Q  295 agaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| |||||||||||||||||||| || |||||||| ||| | ||||| |||||||| || ||| ||||||| || ||||| ||||||||    
T  25726189 agaaagatggcaaagtcagaatgtgtgtggattaccgggacttgaacaaggctagtccgaaggataatttccctttacctcacattgatgt 25726279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 26515330 - 26515574
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  26515330 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 26515428  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  26515429 ttcctaatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 26515528  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || ||||| ||||||||||||||    
T  26515529 ataaagccagtccgaaagacaactttccattacctcatattgatgt 26515574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 31561990 - 31561746
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || || || ||||| |||    
T  31561990 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagtacaaaagcaaattgatgcgggt 31561892  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || ||||| |||||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  31561891 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcctgtgccgaagaaggatggtaaagtccggatgtgtgttgacttcagagacttga 31561792  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  31561791 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 31561746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 16043989 - 16044101
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | |||||||| |    
T  16043989 gccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaacttcccattac 16044088  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  16044089 ctcatattgatgt 16044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 385
Target Start/End: Complemental strand, 16447474 - 16447362
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | |||||||| |    
T  16447474 gccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaacttcccattac 16447375  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  16447374 ctcatattgatgt 16447362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 26667514 - 26667410
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  26667514 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 26667415  T
Q  241 tcctc 245  Q
    |||||    
T  26667414 tcctc 26667410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 16749117 - 16748900
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| ||||| || || ||||| |||    
T  16749117 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaagttcagaagcaaattgatgcgggt 16749019  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  16749018 ttcctcatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttga 16748919  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  16748918 acaaagccagtccaaaaga 16748900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 17526072 - 17526289
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| ||||| || || ||||| |||    
T  17526072 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaagttcagaagcaaattgatgcgggt 17526170  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  17526171 ttcctcatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttga 17526270  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  17526271 acaaagccagtccaaaaga 17526289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 17527142 - 17526925
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| ||||| || || ||||| |||    
T  17527142 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaagttcagaagcaaattgatgcgggt 17527044  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  17527043 ttcctcatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttga 17526944  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  17526943 acaaagccagtccaaaaga 17526925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 16734061 - 16733957
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| ||||| || || ||||| |||    
T  16734061 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaagttcagaagcaaattgatgcgggt 16733963  T
Q  240 ttcctc 245  Q
    ||||||    
T  16733962 ttcctc 16733957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 11443425 - 11443489
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  11443425 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 11443489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 26437795 - 26437859
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  26437795 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 26437859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 45389758 - 45389862
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  45389758 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 45389857  T
Q  241 tcctc 245  Q
    |||||    
T  45389858 tcctc 45389862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 3447862 - 3448088
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| |||||| |||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||  | |||    |     
T  3447862 gtcaggcagaagttgagaaggactcatcccgatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggtttcctaatgacagttgag 3447960  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| ||||    
T  3447961 tatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaag 3448060  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  3448061 acaactttccattacctcatattgatgt 3448088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 26317430 - 26317384
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  26317430 gtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 26317384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 385
Target Start/End: Complemental strand, 4142822 - 4142602
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccct 263  Q
    |||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || ||||| ||||| ||||||||  | |||    | || |||    
T  4142822 cagaaattgagaaggactcctcctgatatggctctcaagat-taagagcgaggttcaaaagcagattgatgcgggtttcctaatgacagttgagtatcct 4142724  T
Q  264 caatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatt 363  Q
     ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | |    
T  4142723 gaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaact 4142624  T
Q  364 tcccattgcctcatattgatgt 385  Q
    | || || ||||||||||||||    
T  4142623 ttccgttacctcatattgatgt 4142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 385
Target Start/End: Complemental strand, 26272662 - 26272442
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccct 263  Q
    |||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| || |||||| | |||    | || |||    
T  26272662 cagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaagcagattgatgcgggcttcctcatgacagttgagtatcct 26272564  T
Q  264 caatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatt 363  Q
     ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | |    
T  26272563 gaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaact 26272464  T
Q  364 tcccattgcctcatattgatgt 385  Q
    | ||||| ||||||||||||||    
T  26272463 ttccattacctcatattgatgt 26272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 289; Significance: 1e-162; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 34468042 - 34468414
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    |||||||||| | || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34468042 catcacttgaggtaagtgtcaaggagcgagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgagatatgccaggtctggatac 34468141  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag 212  Q
    |||||| |||||||||||||||||||| ||||| || |||| ||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  34468142 tgatattgtggtacaccatttgcctttgaagcccgaatgtccgccggtcaagcagaaattgagaagaacccgtcctgatatggccctcaagatcaaagag 34468241  T
Q  213 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtca 312  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34468242 gaagtgcaaaaacagatcgatgcaggttttctcgttacatcaaaataccctcaatggctagccaacatagtgcctgttccgaagaaggatggcaaagtca 34468341  T
Q  313 gaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34468342 gaatgtgtgttgattaccgtgaccttaacaaagctagtcccaaagatgatttcccattacctcatattgatgt 34468414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 36376679 - 36376333
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||| ||||| || |||||||| ||||| |||||  | |    
T  36376679 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccgagatatgccgggtctagacactgatattgtggtgcaccacctac 36376580  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    | |||||||||||||||| ||||||||| || |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||||||||||| ||    
T  36376579 cgttaaagcctgagtgtccgccagtcaaacaaaaattgagaagaacacgtcctgacatggctctcaaaatcaaagaagaagtacagaaacagatcgacgc 36376480  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||||| ||||| || ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  36376479 tggtttcctcgtcacatccaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 36376380  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  36376379 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 36376333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 37001333 - 37000987
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||| ||||| || |||||||| ||||| |||||  | |    
T  37001333 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccgagatatgccgggtctagacactgatattgtggtgcaccacctac 37001234  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    | |||||||||||||||| ||||||||| || |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||||||||||| ||    
T  37001233 cgttaaagcctgagtgtccgccagtcaaacaaaaattgagaagaacacgtcctgacatggctctcaaaatcaaagaagaagtacagaaacagatcgacgc 37001134  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||||| ||||| || ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  37001133 tggtttcctcgtcacatccaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 37001034  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  37001033 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 37000987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 5440942 - 5440596
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  5440942 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 5440843  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || |||||||||| ||||||||| || || ||||||||||| |||||||| |||||||| || |||||||| ||||| |||||||||||||| ||    
T  5440842 ctttgaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaagtacagaaacagatcgacgc 5440743  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  5440742 tggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 5440643  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  5440642 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 5440596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 36 - 382
Target Start/End: Original strand, 31519750 - 31520096
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  31519750 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 31519849  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || ||||| |||| ||||||||| || |||||||||||||| |||||||| |||||||| || |||||||| || || ||||| |||||||| ||    
T  31519850 ctttgaaacctgaatgtccgccagtcaaacaaaaattgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaagcagatcgacgc 31519949  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
    |||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||||||||| ||||||||     
T  31519950 aggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgcgttgactaccgtgat 31520049  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  31520050 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 31520096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 15785442 - 15785096
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| ||||| || ||  | |    
T  15785442 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtgcatcacctac 15785343  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    | || || |||||||||| ||||||||| || |||||||||||||| |||||||| |||||||| || |||||||| || || ||||| |||||||| ||    
T  15785342 cgttgaaacctgagtgtccgccagtcaaacaaaaattgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaagcagatcgacgc 15785243  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
    |||||||||||| |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  15785242 aggtttcctcgtcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 15785143  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  15785142 ttaaacaaagctagcccaaaagacgactttcctttacctcatattga 15785096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 11945131 - 11944785
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| ||||| || ||  | |    
T  11945131 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtgcatcacctac 11945032  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || |||||||||| ||||||||| || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  11945031 ctttgaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 11944932  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  11944931 tggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 11944832  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  11944831 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 11944785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 382
Target Start/End: Original strand, 17956539 - 17956885
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  17956539 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 17956638  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || |||||||||| ||| ||||| || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  17956639 ctttgaaacctgagtgtccgccggtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 17956738  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| || ||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  17956739 tggtttcctcatcacatcaaattacccccagtggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 17956838  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || ||||| || |||||||||||    
T  17956839 ttaaacaaagctagcccgaaagacgacttccctttacctcatattga 17956885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 3484815 - 3484571
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||||||||  || || || ||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || ||||||||||    
T  3484815 aagcctgagtgtcctccggtaaaacagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatgcaggtt 3484716  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    |||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||| || ||| | ||    
T  3484715 tcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcgggacttgaa 3484616  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| |||||||| || ||| |||| || |||||||| ||||||||    
T  3484615 caaggctagtccgaaggataattttcctttgcctcacattgatgt 3484571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 120 - 385
Target Start/End: Complemental strand, 20389622 - 20389357
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| |||||||||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  20389622 gtggaacaccgtttgcctttgaagcctgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 20389523  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || || ||||||||| |  | || ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  20389522 gaaagcaaattgacgcaggtttcttgatcacctcggaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 20389423  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     |||||||| || ||  | |||||||||||||| |||||||||||||| || ||||| ||||||||    
T  20389422 tgttgattatcgggatttgaacaaagctagtccgaaagatgatttccctttacctcacattgatgt 20389357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 385
Target Start/End: Complemental strand, 352837 - 352583
Alignment:
Q  131 tttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatc 230  Q
    ||||||| ||||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||  || || ||     
T  352837 tttgcctctaaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgcgaaagcaaatt 352738  T
Q  231 gatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattacc 330  Q
    || ||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||||||||| ||||| || ||||||||||| ||||| || |    
T  352737 gacgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccgaagaaagatggtaaggtcagaatgtgtgttgactatc 352638  T
Q  331 gtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  352637 gggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 24972453 - 24972698
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||||||    
T  24972453 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcagg 24972551  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | ||| |||||     
T  24972552 tttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttccgagacctg 24972651  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||| | || ||||| ||||||||||||||    
T  24972652 aacaaagccagtccaaaagataactttccattacctcatattgatgt 24972698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 30937184 - 30937428
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||||||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  30937184 aagcctgaatgtcctcccgtcaagcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 30937282  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  30937283 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 30937382  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  30937383 acaaagctagtccaaaagacaactttccattacctcatattgatgt 30937428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 28651790 - 28652034
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  28651790 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 28651888  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||| ||||| |||||| | ||||| ||||| | | | ||||| |    
T  28651889 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaagatggtaaagtccggatgtgtgttgacttcagggacctga 28651988  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  28651989 acaaagctagtccaaaagacaactttccattacctcatattgatgt 28652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 43080803 - 43081047
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||| || ||| || || || |||||||| ||||| ||     
T  43080803 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggc 43080901  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | ||     |||||||| ||||| | ||||| ||||||||||| || ||||| ||||| |||||| | ||||| ||||| | | | ||||| |    
T  43080902 ttcctcatgacggttgaataccctgaatgggttgccaatatagtacctgtgccaaagaaagatggtaaagtccggatgtgtgttgacttcagggacctga 43081001  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  43081002 acaaagctagtccaaaagacaactttccattacctcatattgatgt 43081047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 11551903 - 11552147
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  11551903 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 11552001  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  11552002 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 11552101  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  11552102 acaaagccagtccaaaagacaactttccattacctcatattgatgt 11552147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 22996729 - 22996485
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  22996729 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 22996631  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  22996630 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 22996531  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  22996530 acaaagccagtccaaaagacaactttccattacctcatattgatgt 22996485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 33780037 - 33780281
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  33780037 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 33780135  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  33780136 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 33780235  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  33780236 acaaagccagtccaaaagacaactttccattacctcatattgatgt 33780281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 41677253 - 41677497
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| |||| ||| |||| ||||||||||||||| |||| ||| || |||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  41677253 aagcctgaatgtccgcccgtcaggcagaaattgagaaggactcatccagacatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 41677351  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  41677352 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 41677451  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  41677452 acaaagccagtccaaaagacaactttccattacctcatattgatgt 41677497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 28957397 - 28957153
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||| |||   ||||| || || ||||| ||||| ||||    
T  28957397 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagattaaaagcgaagttcaaaagcagattgatgcgggtt 28957298  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | |||||| ||||| | || || || || || || || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  28957297 tcctcatgacagttgagtaccctgaatgggttgctaatattgtgcccgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 28957198  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  |||| ||||| ||||||||||||||    
T  28957197 caaagccagtccaaaagacaattttccattacctcatattgatgt 28957153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 23628517 - 23628762
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  23628517 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 23628615  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  23628616 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 23628715  T
Q  340 acaaag-ctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||||| |||||  | || ||||| ||||||||||||||    
T  23628716 acaaagcctagtccaaaagacaactttccattacctcatattgatgt 23628762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 15656370 - 15656126
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  15656370 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctaaagattaa-gagcgaggttcaaaaacagattgatgcgggt 15656272  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  15656271 ttcctcatgacagttgagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 15656172  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  15656171 acaaagccagtccaaaagacaactttccattacctcatattgatgt 15656126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 3792089 - 3792333
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||| || ||||  |||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  3792089 aagcctgaatgtcttcccgtcagacagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 3792187  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || ||||| || |||||||||||||| |||||| | ||||||||||| | | | ||| | |    
T  3792188 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtaccagtgccgaagaaggatggtaaagtccggatgtgcgttgacttcagggacttga 3792287  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  3792288 acaaagccagtccaaaagacaactttccattacctcatattgatgt 3792333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 24685757 - 24685513
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||||||||||||||||||| |||| |||  ||||||| || ||||| || ||| || || || ||||| || ||||| |||    
T  24685757 aagcctgaatgtcctcccgtcaagcagaaattgagaaggactcatccaaatatggccctcaagattaa-gagcgaggttcaaaaacatattgatgcgggt 24685659  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | | |    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  24685658 ttcctcatgatagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 24685559  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  24685558 acaaagccagtccaaaagacaactttccattacctcatattgatgt 24685513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 33295076 - 33295320
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  33295076 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 33295174  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  33295175 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 33295274  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||  ||||| |||||  | || ||||| ||||||||||||||    
T  33295275 acaaagtcagtccaaaagacaactttccattacctcatattgatgt 33295320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 34619066 - 34619310
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  34619066 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 34619164  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  34619165 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacctga 34619264  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  34619265 acaaagccagtccaaaagacaactttccattacctcatattgatgt 34619310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 37757531 - 37757772
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  37757531 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 37757630  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  37757631 tcctcttgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacctgaa 37757730  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
    |||||| ||||| |||||  | |||||||| |||||||||||    
T  37757731 caaagccagtccgaaagacaacttcccattacctcatattga 37757772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 5640336 - 5640580
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||||||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  5640336 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 5640435  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  5640436 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 5640535  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  5640536 caaagccagtccaaaagacaactttccattacctcatattgatgt 5640580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 6876853 - 6877097
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  6876853 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 6876952  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  6876953 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 6877052  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  6877053 caaagccagtccaaaagacaactttccattacctcatattgatgt 6877097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 15756464 - 15756360
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  15756464 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 15756365  T
Q  241 tcctc 245  Q
    |||||    
T  15756364 tcctc 15756360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 30031976 - 30032080
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  30031976 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 30032075  T
Q  241 tcctc 245  Q
    |||||    
T  30032076 tcctc 30032080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 33518928 - 33519032
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  33518928 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 33519027  T
Q  241 tcctc 245  Q
    |||||    
T  33519028 tcctc 33519032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 385
Target Start/End: Complemental strand, 8663069 - 8662843
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaat 258  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||||||| | |||    | |    
T  8663069 gtcaggcagaaattgagaaggactcatcccgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtttcctcatgacagttgagt 8662970  T
Q  259 accctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaaga 358  Q
    | ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |||||||| ||||| |||||    
T  8662969 atcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaacaaagccagtccgaaaga 8662870  T
Q  359 tgatttcccattgcctcatattgatgt 385  Q
      | || ||||| ||||||||||||||    
T  8662869 caactttccattacctcatattgatgt 8662843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 26482942 - 26483159
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||| ||||| || || || || || || ||||| |||    
T  26482942 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatc-aagagcgaggtccaaaagcaaattgatgcgggt 26483040  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || ||||| || || ||||||||||| |||||| ||||||| ||||| | | | ||| | |    
T  26483041 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtaccagtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagggacttga 26483140  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  26483141 acaaagccagtccaaaaga 26483159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 13322442 - 13322198
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  13322442 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 13322344  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  13322343 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 13322244  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  13322243 acaaggccagtccaaaagacaactttccattacctcatattgatgt 13322198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 31824019 - 31823775
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  31824019 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcccgatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 31823921  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  31823920 ttcctaatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 31823821  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  31823820 acaaagccagtccaaaagacaactttccattacctcatattgatgt 31823775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 40471162 - 40470918
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  40471162 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 40471064  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  40471063 ttcctaatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 40470964  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  40470963 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 40470918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 18373146 - 18372902
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  18373146 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 18373047  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  18373046 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 18372947  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18372946 caaagccagtccaaaagacaactttccattacctcatattgatgt 18372902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 30154579 - 30154683
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  30154579 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 30154678  T
Q  241 tcctc 245  Q
    |||||    
T  30154679 tcctc 30154683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 2513628 - 2513854
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| ||||  |||||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||  | |||    |     
T  2513628 gtcaggcagaaattgagaaggactcaccctgatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggtttcctaatgacagttgag 2513726  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| || ||||| ||||| ||||    
T  2513727 tatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaataaagccagtccaaaag 2513826  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  |||| ||||| ||||||||||||||    
T  2513827 acaattttccattacctcatattgatgt 2513854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 24726517 - 24726761
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  24726517 aagcctgattgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 24726615  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || || || || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  24726616 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcccgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 24726715  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  24726716 acaaagccagtccaaaagacaactttccattacctcatattgatgt 24726761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 385
Target Start/End: Original strand, 30171041 - 30171261
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccct 263  Q
    |||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| ||||||||  | |||    | || |||    
T  30171041 cagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggtttcctaatgacagttgagtatcct 30171139  T
Q  264 caatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatt 363  Q
     ||||| | ||||| || || ||||| || || |||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | |    
T  30171140 gaatgggttgccaatattgtgcctgtgccaaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaact 30171239  T
Q  364 tcccattgcctcatattgatgt 385  Q
    | ||||| ||||||||||||||    
T  30171240 ttccattacctcatattgatgt 30171261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 31434012 - 31434116
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  31434012 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 31434110  T
Q  240 ttcctc 245  Q
    ||||||    
T  31434111 ttcctc 31434116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 37669098 - 37668854
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || || ||||| ||||| |||    
T  37669098 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaagcagattgatgcgggt 37669000  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  37668999 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 37668900  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  37668899 acaaggccagtccaaaagacaactttccattacctcatattgatgt 37668854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 382
Target Start/End: Complemental strand, 37768603 - 37768362
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||||||||| || ||||||||  | ||||| || || || || ||||| ||||    
T  37768603 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggccctcaagatcaagaatgaagtccaaaagcaaattgatgcgggtt 37768504  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  37768503 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 37768404  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
    ||| || ||||| |||||  | || ||||| |||||||||||    
T  37768403 caaggccagtccaaaagacaactttccattacctcatattga 37768362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 23894886 - 23894998
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | || ||||| |    
T  23894886 gccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaactttccattac 23894985  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  23894986 ctcatattgatgt 23894998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 24683990 - 24684054
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  24683990 aagcctgattgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 24684054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 25202958 - 25203070
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |||||||| ||||| |||||  | |||||||| |    
T  25202958 gccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttgaacaaagccagtccaaaagacaacttcccattac 25203057  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  25203058 ctcatattgatgt 25203070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 25267113 - 25267225
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |||||||| ||||| |||||  | |||||||| |    
T  25267113 gccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttgaacaaagccagtccaaaagacaacttcccattac 25267212  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  25267213 ctcatattgatgt 25267225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 32593886 - 32593822
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  32593886 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 32593822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 37356255 - 37356151
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  37356255 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 37356156  T
Q  241 tcctc 245  Q
    |||||    
T  37356155 tcctc 37356151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 325
Target Start/End: Original strand, 12134741 - 12134907
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || |||||||| ||||||||| | |||    |     
T  12134741 gtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaatcgatgcgggtttcctcatgacagttgag 12134839  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttga 325  Q
    |||||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| |||||    
T  12134840 taccctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttga 12134907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 9320042 - 9320088
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  9320042 gtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 9320088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 18498337 - 18498273
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||||||||  ||  ||| ||||||||||||||| |||| ||| ||||||||||| |||||    
T  18498337 aagcctgagtgtcctcccatcaggcagaaattgagaaggactcatccagatatggctctcaagat 18498273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 20442491 - 20442863
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  20442491 catcacttgaggcaagtgtcaagaagcgagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgagatatgccgggtctggatac 20442590  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag 212  Q
    ||||||||||||||||||||| ||||| || || ||||||| ||| |||||||||||||| |||||||| || ||||||||||| || ||||| ||||||    
T  20442591 tgatatcgtggtacaccatttacctttgaaacccgagtgtccgccggtcaagcagaaattaagaagaacccgccctgatatggccctcaagattaaagag 20442690  T
Q  213 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtca 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  20442691 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtgcctgttctgaagaaggatggcaaagtca 20442790  T
Q  313 gaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  20442791 gaatgtgtgttgattaccgtgaccttaacaaagctagtcccaaagatgattttccattacctcatattgatgt 20442863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 41439617 - 41439989
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  41439617 catcacttgaggcaagtgtcaagaagcgagtgatagagcttctcaaagaatatgttgatgtgtttgcttggtcgtaccgagatatgccgggtctggatac 41439716  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag 212  Q
    ||||||||||||||||||||| ||||| || || ||||||| ||| |||||||||||||| |||||||| || ||||||||||| || ||||| ||||||    
T  41439717 tgatatcgtggtacaccatttacctttgaaacccgagtgtccgccggtcaagcagaaattaagaagaacccgccctgatatggccctcaagattaaagag 41439816  T
Q  213 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtca 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41439817 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtgcctgttccgaagaaggatggcaaagtca 41439916  T
Q  313 gaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  41439917 gaatgtgtgttgattaccgtgaccttaacaaagctagtcccaaagatgattttccattacctcatattgatgt 41439989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 29 - 385
Target Start/End: Original strand, 15917907 - 15918263
Alignment:
Q  29 tgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacac 128  Q
    |||||||| || ||||||||||||||| |||||||||  |||||||||||| ||||||||||  |||||||| ||||| ||||||||||| || || ||     
T  15917907 tgtcaagaggcgagtgatagagcttcttaaagaatatagtgatgtgttcgcctggtcgtaccaagatatgccgggtcttgatactgatattgtagtgcat 15918006  T
Q  129 catttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacaga 228  Q
    ||| ||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||    
T  15918007 catctgcctttgaagcctgagtgcccgccagtcaagcagaaattgagaagaacccgtcctgacatggctctcaagattaaagaggaagtacagaaacaga 15918106  T
Q  229 tcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgatta 328  Q
    |||| ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||||    
T  15918107 tcgacgcaggtttccttgtcacatcaaagtaccctcaatggctagccaatatagtgcctgttccaaagaaggatggtaaagtcagaatgtgtgttgatta 15918206  T
Q  329 ccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  15918207 ccgggatctaaacaaagccagtcccaaggatgatttcccgttgcctcatattgatgt 15918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 29 - 385
Target Start/End: Complemental strand, 15593781 - 15593425
Alignment:
Q  29 tgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacac 128  Q
    |||||||| || ||||||||||||||| |||||||||  ||||||||| || ||||||||||  |||||| | ||||| ||||||||||| ||||| ||     
T  15593781 tgtcaagaggcgagtgatagagcttcttaaagaatatagtgatgtgtttgcctggtcgtaccaagatatgtcgggtcttgatactgatattgtggtgcat 15593682  T
Q  129 catttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacaga 228  Q
    ||| ||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||    
T  15593681 catctgcctttgaagcctgagtgcccgccagtcaagcagaaattgagaagaacccgtcctgacatggctctcaagattaaagaggaagtacagaaacaga 15593582  T
Q  229 tcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgatta 328  Q
    |||| || |||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||||    
T  15593581 tcgacgcgggtttccttgtcacatcaaagtaccctcaatggctagccaatatagtgcctgttccaaagaaggatggtaaagtcagaatgtgtgttgatta 15593482  T
Q  329 ccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  15593481 ccgggatctaaacaaagccagtcccaaggatgatttcccgttgcctcatattgatgt 15593425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 5951665 - 5951319
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    |||||||| |||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  5951665 aagcaagtaatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 5951566  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || |||||||||| ||||||||| || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  5951565 ctttgaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 5951466  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| || ||| |||| |||||||| |||||||| ||||||||||| || ||||||||||| ||||| ||||||||     
T  5951465 tggtttcctcatcacatcaaattacccccagtggttagctaacatagtgcctgttccaaagaaggatggtaaggtcagaatgtgtgttgactaccgtgat 5951366  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  5951365 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 5951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 36 - 382
Target Start/End: Original strand, 46379731 - 46380077
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||| ||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  46379731 aagcaggtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 46379830  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || ||||| |||| ||||||||| || |||||||||||||| || ||||| |||||||| || ||||||||||| || |||||||||||||| ||    
T  46379831 ctttgaaacctgaatgtccgccagtcaaacaaaaattgagaagaacacgccctgacatggctctcaaaatcaaagaggaggtacagaaacagatcgacgc 46379930  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || ||||||||     
T  46379931 tggtttcctcatcacatcaaattacccccaatggttagctaacatagttcctgttccaaagaaagatggtaaggtcagaatgtgtgtcgactaccgtgat 46380030  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  46380031 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 46380077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 135 - 385
Target Start/End: Complemental strand, 11926122 - 11925872
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| ||||    
T  11926122 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattgatg 11926023  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||    
T  11926022 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcggga 11925923  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  11925922 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 11925872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 22958949 - 22959199
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| ||||    
T  22958949 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattgatg 22959048  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||    
T  22959049 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcggga 22959148  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || || ||||| ||||||||    
T  22959149 cttgaacaaggctagtccgaaggataattttcctttacctcacattgatgt 22959199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 16430901 - 16431151
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || ||||    
T  16430901 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatg 16431000  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||| || ||    
T  16431001 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcggga 16431100  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  16431101 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 16431151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 24209332 - 24209088
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||||||||  || || || ||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || ||||||||||    
T  24209332 aagcctgagtgtcctccggtaaaacagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatgcaggtt 24209233  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    |||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||| || ||| | ||    
T  24209232 tcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcgggacttgaa 24209133  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| |||||||| || ||| |||| || |||||||| ||||||||    
T  24209132 caaggctagtccgaaggataattttcctttgcctcacattgatgt 24209088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 48 - 385
Target Start/End: Original strand, 15703882 - 15704219
Alignment:
Q  48 gagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgcctttaaagcctg 147  Q
    |||||||||| ||| |||| |||| | || || ||||| |||  ||| ||||||||||| ||  ||||| | |||| ||||    ||||||| |||||||    
T  15703882 gagcttctcagagagtatgctgatatatttgcatggtcatacaaggacatgccaggtctagaccctgatgtggtggaacacagactgcctttgaagcctg 15703981  T
Q  148 agtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgt 247  Q
    ||||||  || || |||||||||||||||||| | | |||||| ||||| || ||||| ||||| ||||||| ||| || ||||||||||| ||||| ||    
T  15703982 agtgtcctccggtaaagcagaaattgagaagatcccatcctgacatggccctcaagattaaagaagaagtgcggaagcaaatcgatgcaggcttcctggt 15704081  T
Q  248 tacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagct 347  Q
     |||||  | || ||||||||| | ||||||||||| || ||||||||||| ||||| |||||||||||||| ||||||||||| ||  | |||||||||    
T  15704082 cacatcggagtatcctcaatggttggccaacatagtgcccgttccgaagaaagatggaaaagtcagaatgtgtgttgattaccgggatttgaacaaagct 15704181  T
Q  348 agtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||| || ||| ||||||| || ||||| ||||||||    
T  15704182 agtccgaaggataatttccctttacctcacattgatgt 15704219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 385
Target Start/End: Original strand, 4442573 - 4442838
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| ||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  4442573 gtggaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 4442672  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || || ||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| |||||||| ||||| ||||| || |||||||||||    
T  4442673 gaaagcaaattgacgcaggtttcttgattacctccgaatatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtg 4442772  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||  |||||||||||||| || ||||| ||||||||    
T  4442773 tgttgactatcgggatttgaacaaagctagtctgaaagatgatttccctttacctcacattgatgt 4442838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 7089793 - 7089541
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| ||||||||||||   || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| ||    
T  7089793 tgcctttgaagcctgagtgttctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattga 7089694  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || || ||| | || ||||| ||| | ||||||||||| || ||||| ||||| ||||| |||||| ||||||| |||||||| ||     
T  7089693 tgcaggtttcctggtcacgtcagagtatcctcattggttggccaacatagtgcccgttccaaagaaagatggtaaagtccgaatgtgtgttgattatcgg 7089594  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||  | |||||||||||||| || ||| ||||||| || ||||| ||||||||    
T  7089593 gatttgaacaaagctagtccgaaggataatttccctttacctcacattgatgt 7089541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 385
Target Start/End: Original strand, 6570763 - 6571100
Alignment:
Q  48 gagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgcctttaaagcctg 147  Q
    |||||||||| |||||||| |||| | || || ||||| |||  ||| ||||| ||||| ||  ||||| |||||| ||||   |||||||| |||||||    
T  6570763 gagcttctcagagaatatgctgatatatttgcatggtcatacaaggacatgccgggtctagaccctgatgtcgtggaacacagattgcctttgaagcctg 6570862  T
Q  148 agtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgt 247  Q
    | ||||  || || |||||||||||||||||| ||  ||| || ||||| || ||||||||||||||||| |  || ||||| |||||||||||||| ||    
T  6570863 aatgtcctccggtaaagcagaaattgagaagatctaatcccgagatggccctcaagatcaaagaggaagtacgcaagcagattgatgcaggtttcctggt 6570962  T
Q  248 tacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagct 347  Q
     || ||| | || ||||| ||| ||||||||||||| |  ||||| ||||| ||||||||||| |||||||| || |||||||| ||  | ||||| |||    
T  6570963 cacgtcagagtatcctcagtggttagccaacatagtgctcgttccaaagaaagatggcaaagttagaatgtgtgtcgattaccgggatttgaacaaggct 6571062  T
Q  348 agtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||| || ||| ||||||| || ||||| ||||||||    
T  6571063 agtccgaaggataatttccctttacctcacattgatgt 6571100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 131 - 385
Target Start/End: Complemental strand, 6964201 - 6963947
Alignment:
Q  131 tttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatc 230  Q
    ||||||| ||||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||  || || ||     
T  6964201 tttgcctctaaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgcgaaagcaaatt 6964102  T
Q  231 gatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattacc 330  Q
    || ||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||||||||| ||||| || ||||||||||| ||||| || |    
T  6964101 gacgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccgaagaaagatggtaaggtcagaatgtgtgttgactatc 6964002  T
Q  331 gtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
      ||  | |||||||||||||| || |||||||||||  | ||||| ||||||||    
T  6964001 aagatttgaacaaagctagtccgaaggatgatttccctctacctcacattgatgt 6963947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 8298491 - 8298717
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaat 258  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || |  || || || |||||||| ||||| ||||||||| | |||    | |    
T  8298491 gtcaggcagaaattgagaaggactcatccagatatggctctcaagattaagggcgaggttcaaaaacagattgatgcgggtttcctcatgacagttgagt 8298590  T
Q  259 accctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaaga 358  Q
    ||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |||||||||||||| |||||    
T  8298591 accctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctgaacaaagctagtccaaaaga 8298690  T
Q  359 tgatttcccattgcctcatattgatgt 385  Q
      | || ||||| ||||||||||||||    
T  8298691 caactttccattacctcatattgatgt 8298717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 18053764 - 18054008
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  18053764 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 18053862  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18053863 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18053962  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||| | || ||||| ||||||||||||||    
T  18053963 acaaagctagtccaaaagataactttccattacctcatattgatgt 18054008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 7075708 - 7075952
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| |||||||||||||| || || ||| || || || |||||||| ||||| |||    
T  7075708 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctcttaatattaa-gagcgaggttcaaaaacagattgatgcgggt 7075806  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || || |||||||| |||||| | ||||| ||||| | | | |||||||    
T  7075807 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgcccaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctaa 7075906  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  7075907 acaaagccagtccaaaagacaactttccattacctcatattgatgt 7075952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 10398646 - 10398890
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  10398646 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggtccaaaaacagattgatgcgggt 10398744  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | ||     | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  10398745 ttcctcatgacggttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 10398844  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||||||||||||||||||    
T  10398845 acaaagccagtccaaaagacaactttccattgcctcatattgatgt 10398890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 18274810 - 18274566
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  18274810 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctaaagattaa-gagcgaggttcaaaaacagattgatgcgggt 18274712  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18274711 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18274612  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18274611 acaaagccagtccaaaagacaactttccattacctcatattgatgt 18274566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 18290111 - 18289867
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  18290111 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctaaagattaa-gagcgaggttcaaaaacagattgatgcgggt 18290013  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18290012 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18289913  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18289912 acaaagccagtccaaaagacaactttccattacctcatattgatgt 18289867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 18305412 - 18305168
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  18305412 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctaaagattaa-gagcgaggttcaaaaacagattgatgcgggt 18305314  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18305313 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18305214  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18305213 acaaagccagtccaaaagacaactttccattacctcatattgatgt 18305168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 22385336 - 22385092
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  22385336 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 22385238  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || || |||||||| |||||| | ||||| ||||| | | | ||||| |    
T  22385237 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctga 22385138  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  22385137 acaaagctagtccaaaagacaactttccattacctcatattgatgt 22385092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 29146514 - 29146270
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  29146514 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 29146416  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  29146415 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 29146316  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  29146315 acaaagccagtccaaaagacaactttccattacctcatattgatgt 29146270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 35883268 - 35883512
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  35883268 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 35883366  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  35883367 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 35883466  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  35883467 acaaagccagtccaaaagacaactttccattacctcatattgatgt 35883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 4724151 - 4724377
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||| | |||    |     
T  4724151 gtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggttcaaaaacagattgatgcgggtttcctcatgacagttgag 4724249  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| ||||    
T  4724250 taccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaag 4724349  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  4724350 acaactttccattacctcatattgatgt 4724377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 385
Target Start/End: Complemental strand, 8287205 - 8286984
Alignment:
Q  164 gcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccc 262  Q
    ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||| | |||    | |||||    
T  8287205 gcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagatagatgcgggtttcctcatgacagttgagtaccc 8287107  T
Q  263 tcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgat 362  Q
    | ||||| |  |||| || |||||||| || ||||||||||| |||||| | ||||| ||||||| | | ||||| |||||||| ||||| |||||  |     
T  8287106 tgaatgggtttccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgatttcagagacctgaacaaagccagtccaaaagacaac 8287007  T
Q  363 ttcccattgcctcatattgatgt 385  Q
    || ||||| ||||||||||||||    
T  8287006 tttccattacctcatattgatgt 8286984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 18532884 - 18533129
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| ||    
T  18532884 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggtccaaaagcagattgatgcggg 18532982  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||| ||| | |||    | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||||| | | |||||     
T  18532983 ttttctcatgacagtcgagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgatttcagagacctg 18533082  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  | |||||||| ||||||||||||||    
T  18533083 aacaaagccagtccaaaagacaacttcccattacctcatattgatgt 18533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 4794393 - 4794149
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  4794393 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 4794295  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||| ||||| |||||| | ||||| ||||| | | | ||||| |    
T  4794294 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaatgatggtaaagtccggatgtgtgttgacttcagagacctga 4794195  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  4794194 acaaagccagtccaaaagacaactttccattacctcatattgatgt 4794149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 6540500 - 6540256
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||| |||||| ||||| ||||| || || ||||| ||||| |||    
T  6540500 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggctctcaagatc-aagagtgaagttcaaaagcagattgatgcgggt 6540402  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || ||||| || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  6540401 ttcctcatgacagttgagtaccctgaatgggttgctaacattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttga 6540302  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  6540301 acaaagccagtccaaaagacaactttccattacctcatattgatgt 6540256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 15738852 - 15738608
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  15738852 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 15738754  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    ||| || | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  15738753 ttcttcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 15738654  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  15738653 acaaagccagtccaaaagacaactttccattacctcatattgatgt 15738608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 380
Target Start/End: Complemental strand, 15890464 - 15890224
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||| || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| ||    
T  15890464 aaagcctgaatgtcttcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcggg 15890366  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||| ||||| |||||| | ||||| ||||| | | | |||||     
T  15890365 tttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaagatggtaaagtccggatgtgtgttgacttcagagacctg 15890266  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatatt 380  Q
    |||||||| ||||| |||||  | || ||||| |||||||||    
T  15890265 aacaaagccagtccaaaagacaactttccattacctcatatt 15890224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 20068542 - 20068786
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  20068542 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 20068640  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  20068641 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 20068740  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  20068741 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 20068786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 32441653 - 32441897
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| || |||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  32441653 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagacatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 32441751  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  32441752 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 32441851  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  32441852 acaaagccagtccaaaagacaactttccattacctcatattgatgt 32441897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 48468429 - 48468673
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  48468429 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 48468527  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  48468528 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 48468627  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || ||||| ||||||||||||||    
T  48468628 ataaagccagtccaaaagacaactttccattacctcatattgatgt 48468673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 5607072 - 5606828
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || |||||||| ||||| ||||    
T  5607072 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaaacagattgatgcgggtt 5606973  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | |||||| ||||| | || || || || || || |||||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  5606972 tcctcatgacagttgagtaccctgaatgggttgctaatattgtgccagtgccgaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 5606873  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||| |||||  | || ||||| ||||||||||||||    
T  5606872 caaggccagtccaaaagacaactttccattacctcatattgatgt 5606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 6204405 - 6204649
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||  ||     
T  6204405 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgtgggc 6204503  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  6204504 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 6204603  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  6204604 acaaagccagtccgaaagacaactttccattacctcatattgatgt 6204649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 29662728 - 29662484
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| || ||||| || ||||| || ||| || || || |||||||||||||| |||    
T  29662728 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagacatggccctcaagattaa-gagcgaggttcaaaaacagatcgatgcgggt 29662630  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| ||||||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  29662629 ttcctaatgacagttgagtatcctgaatgggttgccaatatagtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 29662530  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  29662529 acaaagccagtccaaaagacaactttccattacctcatattgatgt 29662484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 17982707 - 17982603
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  17982707 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 17982608  T
Q  241 tcctc 245  Q
    |||||    
T  17982607 tcctc 17982603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 18227698 - 18227802
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  18227698 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 18227797  T
Q  241 tcctc 245  Q
    |||||    
T  18227798 tcctc 18227802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 28341679 - 28341923
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || |||||||| ||||| ||||    
T  28341679 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaaacagattgatgcgggtt 28341778  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | |||||| ||||| | || || || || || || |||||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  28341779 tcctcatgacagttgagtaccctgaatgggttgctaatattgtgccagtgccgaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 28341878  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || || || ||||||||||||||    
T  28341879 caaagccagtccaaaagacaactttccgttacctcatattgatgt 28341923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 385
Target Start/End: Original strand, 18333213 - 18333376
Alignment:
Q  222 aaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcg 321  Q
    |||||||| ||||||||||||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| |    
T  18333213 aaacagattgatgcaggtttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtg 18333312  T
Q  322 ttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| | | | ||||| |||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18333313 ttgacttcagagacctgaacaaagccagtccaaaagacaactttccattacctcatattgatgt 18333376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 24330665 - 24330768
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||||||  | ||||| || |||||||| ||||| ||||    
T  24330665 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcccgatatggctctcaagatcaagaatgaagttcaaaaacagattgatgcgggtt 24330764  T
Q  241 tcct 244  Q
    ||||    
T  24330765 tcct 24330768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 8214237 - 8214481
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| |||||||| || |||||| ||||| ||||| || || ||||| ||||| |||    
T  8214237 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggccctcaagatc-aagagtgaagttcaaaagcagattgatgcgggt 8214335  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || || |||||||| |||||| | ||||| ||||| | | | ||||| |    
T  8214336 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgcccaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctga 8214435  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || || || ||||||||||||||    
T  8214436 ataaagccagtccaaaagacaactttccgttacctcatattgatgt 8214481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 11108110 - 11107866
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  11108110 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 11108012  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  11108011 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 11107912  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  11107911 acaaagccagtccgaaagacaactttccgttacctcatattgatgt 11107866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 18245243 - 18245487
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||| |||||| ||||| ||||| || || ||||| ||||| |||    
T  18245243 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggctctcaagatc-aagagtgaagttcaaaagcagattgatgcgggt 18245341  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18245342 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18245441  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  18245442 acaaggccagtccaaaagacaactttccattacctcatattgatgt 18245487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 20574601 - 20574357
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  20574601 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 20574503  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  20574502 ttcctaatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 20574403  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || ||||| ||||||||||||||    
T  20574402 ataaagccagtccaaaagacaactttccattacctcatattgatgt 20574357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 22868606 - 22868362
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  22868606 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 22868508  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  22868507 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttga 22868408  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  22868407 acaaagccagtccaaaagacaactttccattacctcatattgatgt 22868362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 22883665 - 22883421
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  22883665 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 22883567  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  22883566 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttga 22883467  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  22883466 acaaagccagtccaaaagacaactttccattacctcatattgatgt 22883421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 31962213 - 31961969
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||| || ||| || || || || ||||| ||||| |||    
T  31962213 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagattaa-gagcgaggttcaaaagcagattgatgcgggt 31962115  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  31962114 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 31962015  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  31962014 acaaggccagtccaaaagacaactttccattacctcatattgatgt 31961969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 47025955 - 47026199
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  47025955 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 47026053  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || || || || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  47026054 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcccgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 47026153  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  47026154 acaaagccagtccaaaagacaactttccattacctcatattgatgt 47026199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 51784525 - 51784769
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  51784525 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 51784623  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  51784624 ttcctcatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 51784723  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  51784724 acaaagccagtccaaaagacaactttccattacctcatattgatgt 51784769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 4419417 - 4419661
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  4419417 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 4419516  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  4419517 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 4419616  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  4419617 caaagccagtccaaaagacaactttccattacctcatattgatgt 4419661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 10645575 - 10645819
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  10645575 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 10645674  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  10645675 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 10645774  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  10645775 caaagccagtccaaaagacaactttccattacctcatattgatgt 10645819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 7999080 - 7999306
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| |||||| ||||| || ||||| || ||| || || || || ||||| ||||| ||||||||| | |||    |     
T  7999080 gtcaggcagaaattgagaaggactcatcctgacatggccctcaagattaa-gagcgaggttcaaaagcagattgatgcgggtttcctcatgacagttgag 7999178  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||||| || ||||| ||||    
T  7999179 taccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaggccagtccaaaag 7999278  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  7999279 acaactttccattacctcatattgatgt 7999306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 382
Target Start/End: Complemental strand, 5594115 - 5593874
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  5594115 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 5594017  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  5594016 ttcctcatgacagttgagtaccccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 5593917  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
    ||||||| ||||| |||||  | || ||||| |||||||||||    
T  5593916 acaaagccagtccaaaagacaactttccattacctcatattga 5593874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 4344434 - 4344190
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||  || || ||||| ||||| |||    
T  4344434 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagctcaaaagcagattgatgcgggt 4344336  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  4344335 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 4344236  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  4344235 acaaggccagtccaaaagacaactttccattacctcatattgatgt 4344190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 5469490 - 5469731
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| || ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  5469490 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 5469589  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || ||  |||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  5469590 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgtctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 5469689  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
    |||||| ||||| |||||  | |||||||| |||||||||||    
T  5469690 caaagccagtccgaaagacaacttcccattacctcatattga 5469731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 28023784 - 28024028
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||| ||||||||| |||| ||||||||||||||| |||||  ||||| || || || || ||||| ||||| |||    
T  28023784 aagcctgaatgtcctcccgtcaggcagagattgagaaggactcatcctgatatggctctcaagat-taagagtgaggttcaaaagcagattgatgcgggt 28023882  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || || || || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  28023883 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcccgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 28023982  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  28023983 acaaagccagtccaaaagacaactttccattacctcatattgatgt 28024028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 5016216 - 5016320
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  5016216 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 5016315  T
Q  241 tcctc 245  Q
    |||||    
T  5016316 tcctc 5016320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 385
Target Start/End: Complemental strand, 16622230 - 16622004
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| ||||| ||| | |||    |     
T  16622230 gtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggttcaaaagcagattgatgcgggttttctcatgacagtcgag 16622132  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| ||||| ||||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| | |||||| ||||| ||||    
T  16622131 tatcctgaatgggtagccaatattgtccctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctgatcaaagccagtccaaaag 16622032  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | |||||||| || |||||||||||    
T  16622031 acaacttcccattaccccatattgatgt 16622004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 28113712 - 28113645
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaa 208  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||||||    
T  28113712 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagatcaa 28113645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 21677337 - 21677449
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| || ||||| ||||| |||||  | || ||||| |    
T  21677337 gccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaataaagccagtccaaaagacaactttccattac 21677436  T
Q  373 ctcatattgatgt 385  Q
    |||||||||||||    
T  21677437 ctcatattgatgt 21677449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 120 - 385
Target Start/End: Complemental strand, 21761340 - 21761075
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||||||||||||| ||||| || || ||||||| ||| |||||||||||||| |||||||| |||||||||||||| || ||||| |||||||||||||    
T  21761340 gtggtacaccatttacctttgaaacccgagtgtccgccggtcaagcagaaattaagaagaacccgtcctgatatggccctcaagattaaagaggaagtgc 21761241  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21761240 agaaacagatcgatgtaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtgcctgttccgaagaaggatggcaaagtcagaatgtg 21761141  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  21761140 tgttgattaccgtgaccttaacaaagctagtccaaaagatgatttcccattacctcatattgatgt 21761075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 358
Target Start/End: Original strand, 12383095 - 12383417
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||||||||| || |||||||| |||||||| ||  | |    
T  12383095 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccaggtctagacactgatattgtggtacatcacctac 12383194  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || ||||| |||| ||||||||| || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  12383195 ctttgaaacctgaatgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 12383294  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  12383295 tggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 12383394  T
Q  336 ctaaacaaagctagtcccaaaga 358  Q
     ||||||||||||| || |||||    
T  12383395 ttaaacaaagctagcccgaaaga 12383417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 36 - 382
Target Start/End: Original strand, 22948828 - 22949174
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || ||| |||| ||||| || ||  | |    
T  22948828 aagcaagtgatagagctcctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactaatattgtggtgcatcacctac 22948927  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || |||||||||| |||||| || || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  22948928 ctttgaaacctgagtgtccgccagttaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 22949027  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  22949028 tggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 22949127  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  22949128 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 22949174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 34700610 - 34700860
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| ||||    
T  34700610 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattgatg 34700709  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | | ||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||    
T  34700710 caggtttcctagtcacatcagagtatcctcaatggttggtcaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcggga 34700809  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  34700810 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 34700860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 42393067 - 42393319
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || ||||||||||||||||| |  || || || ||    
T  42393067 tgcctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtacgaaagcaaattga 42393166  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||     
T  42393167 tgcaggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgg 42393266  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| |||| || || ||||| ||||||||    
T  42393267 gacttgaacaaggctagtccgaaggataattttcctttacctcacattgatgt 42393319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 385
Target Start/End: Complemental strand, 26725001 - 26724736
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| ||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  26725001 gtggaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 26724902  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || |||||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  26724901 gaaagcaaattgatgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 26724802  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  26724801 tgttgactatcgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 26724736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 385
Target Start/End: Complemental strand, 34535168 - 34534903
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| ||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  34535168 gtggaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 34535069  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || |||||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  34535068 gaaagcaaattgatgcaggtttcttgattacctccgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 34534969  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  34534968 tgttgactatcgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 34534903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 23126272 - 23126028
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||| ||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  23126272 aagcctgaatgtcctcccgtcaggcaaaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 23126174  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  23126173 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 23126074  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  23126073 acaaagctagtccaaaagacaactttccattacctcatattgatgt 23126028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 28884747 - 28884991
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  28884747 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 28884845  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  28884846 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 28884945  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  28884946 acaaagccagtccaaaagacaactttccattacctcatattgatgt 28884991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 385
Target Start/End: Complemental strand, 27432127 - 27431901
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||| | |||    |     
T  27432127 gtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggtttcctcatgacagttgag 27432029  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| ||||    
T  27432028 taccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaag 27431929  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  27431928 acaactttccattacctcatattgatgt 27431901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 385
Target Start/End: Complemental strand, 19454128 - 19453883
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||||||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| ||    
T  19454128 aaagcctgaatgtcctcccgtcaagcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggttcaaaagcagattgatgcggg 19454030  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||| ||| | |||    | || ||| ||||| | ||||| || |||||||| || |||||| |||| |||||| ||||||| ||||| | | | |||||     
T  19454029 ttttctcatgacaatcgagtatcctgaatgggttgccaatattgtacctgtgccaaagaagaatggaaaagtccgaatgtgtgttgacttcagagacctg 19453930  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  |||||||||| || |||||||||||    
T  19453929 aacaaagccagtccaaaagacaatttcccattaccccatattgatgt 19453883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 13934251 - 13934007
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || ||||| ||||| ||||| |||    
T  13934251 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcagaagcagattgatgcgggt 13934153  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || ||||| || |||||||||||||| |||||| | ||||||||||| | | | ||| | |    
T  13934152 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtaccagtgccgaagaaggatggtaaagtccggatgtgcgttgacttcagggacttga 13934053  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  13934052 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 13934007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 20840453 - 20840697
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  20840453 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 20840551  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  20840552 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 20840651  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  20840652 acaaagccagtccaaaagacaactttccattacctcatattgatgt 20840697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 12658076 - 12658320
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  12658076 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 12658174  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| |   | ||||| |    
T  12658175 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgactttagagacctga 12658274  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  12658275 acaaagccagtccaaaagacaactttccattacctcatattgatgt 12658320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 16827042 - 16826938
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  16827042 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 16826943  T
Q  241 tcctc 245  Q
    |||||    
T  16826942 tcctc 16826938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 16894438 - 16894542
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  16894438 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 16894537  T
Q  241 tcctc 245  Q
    |||||    
T  16894538 tcctc 16894542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 19414205 - 19414101
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  19414205 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 19414106  T
Q  241 tcctc 245  Q
    |||||    
T  19414105 tcctc 19414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 32052343 - 32052447
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  32052343 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 32052442  T
Q  241 tcctc 245  Q
    |||||    
T  32052443 tcctc 32052447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 39892609 - 39892713
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  39892609 aagcctgattgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 39892708  T
Q  241 tcctc 245  Q
    |||||    
T  39892709 tcctc 39892713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 385
Target Start/End: Complemental strand, 21674861 - 21674635
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaat 258  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||||||| | |||    | |    
T  21674861 gtcaggcagaaattgagaaggactcatcccgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtttcctcatgacagttgagt 21674762  T
Q  259 accctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaaga 358  Q
    | ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||||| || ||||| |||||    
T  21674761 atcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacctgaacaaggccagtccaaaaga 21674662  T
Q  359 tgatttcccattgcctcatattgatgt 385  Q
      | || ||||| ||||||||||||||    
T  21674661 caactttccattacctcatattgatgt 21674635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 9347690 - 9347446
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  9347690 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 9347592  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||  ||||| | ||||| || |||||||| || || |||||||| |||||| | ||||| ||||| | | | ||||| |    
T  9347591 ttcctcatgacagttgagtaccccgaatgggttgccaatattgtacctgtgcccaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctga 9347492  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || || || ||||||||||||||    
T  9347491 ataaagccagtccaaaagacaactttccgttacctcatattgatgt 9347446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 21761407 - 21761358
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaa 62  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  21761407 catcacttgatgcaagtgtcaagaagcgagtgatagagcttctcaaagaa 21761358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 21700874 - 21700630
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| ||  | || || || || ||||| ||||| ||||    
T  21700874 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaagaatgaggttcaaaagcagattgatgcgggtt 21700775  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    | ||| | |||    | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  21700774 ttctcatgacagtcgagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctgaa 21700675  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | |||||||| |  |||||||||||    
T  21700674 caaagccagtccaaaagacaacttcccattactgcatattgatgt 21700630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 31878826 - 31879070
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  31878826 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 31878925  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  31878926 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 31879025  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  31879026 caaagccagtccaaaagacaactttccattacctcatattgatgt 31879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 34864224 - 34864328
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  34864224 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 34864323  T
Q  241 tcctc 245  Q
    |||||    
T  34864324 tcctc 34864328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 37683599 - 37683495
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  37683599 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 37683500  T
Q  241 tcctc 245  Q
    |||||    
T  37683499 tcctc 37683495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 37698864 - 37698760
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  37698864 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 37698765  T
Q  241 tcctc 245  Q
    |||||    
T  37698764 tcctc 37698760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 37927909 - 37928013
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  37927909 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 37928008  T
Q  241 tcctc 245  Q
    |||||    
T  37928009 tcctc 37928013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 27806243 - 27806487
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  27806243 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcnggt 27806341  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  27806342 ttcctaatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 27806441  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||| | |||||  | || ||||| ||||||||||||||    
T  27806442 ataaagccagttcaaaagacaactttccattacctcatattgatgt 27806487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 39049523 - 39049279
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  39049523 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 39049425  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||  | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  39049424 ttcctaatgacagttgagtatcctgaatgggttgccaatatcgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 39049325  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||||| ||||| |||||  | || || || ||||||||||||||    
T  39049324 ataaagccagtccaaaagacaactttccgttacctcatattgatgt 39049279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 12714305 - 12714241
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  12714305 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 12714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 30 - 385
Target Start/End: Complemental strand, 36066 - 35711
Alignment:
Q  30 gtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacacc 129  Q
    ||||||| || ||||||||||||||| |||||||||  |||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||| || |    
T  36066 gtcaagaggcgagtgatagagcttcttaaagaatatagtgatgtgttcgcttggtcgtaccaagatatgccgggtctggatactgatattgtggtgcatc 35967  T
Q  130 atttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagat 229  Q
    || |||| || ||||||||||| | |||| |||||||||||||||||||||| |||||||| |||||||| ||||| |||||| |||| |||||||| ||    
T  35966 atctgccgttgaagcctgagtgcccgccaatcaagcagaaattgagaagaacccgtcctgacatggctctcaagattaaagagtaagtacagaaacaaat 35867  T
Q  230 cgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattac 329  Q
    ||| ||||| || || || |||||||| ||||||||||||||||||||  |||| |||||||| ||||||||||| |||||||||||||| |||||||||    
T  35866 cgacgcagggtttctggtcacatcaaagtaccctcaatggctagccaatgtagtgcctgttccaaagaaggatggtaaagtcagaatgtgtgttgattac 35767  T
Q  330 cgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    || || ||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  35766 cgggatctaaacaaagccagtcccaaagatgatttcccgctgcctcatattgatgt 35711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 4670 - 5042
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||  || |||| || | |||||||||||| ||||||   ||  |||||||    
T  4670 catcacttgaagcaaatgtcaagaagcaagtgataaaacttctcaaagagtacatttatgtatttgtttggtcgtaccgagatatgttgggattggatac 4769  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag 212  Q
    |||||| ||||| |||| ||| ||||| |||||||| || | |||||| || ||||| |||||||| ||     |||| |||||||| ||||||||| ||    
T  4770 tgatattgtggtgcaccgttttcctttgaagcctgaatgcccgccagttaaacagaagttgagaaggacctactctgacatggctctcaagatcaaatag 4869  T
Q  213 gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtca 312  Q
    |||||||| || || || || ||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||| |||||||| || ||||    
T  4870 gaagtgcaaaagcaaattgacgcaggtttcctcgttacatcagaatatcctcaatggctagccaacatagtgtctgttccgaataaggatggtaaggtca 4969  T
Q  313 gaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  4970 taatgtgtgttgattaccgtgacctgaacaaagctagtcccaaagatgattttccgctgcctcatattgatgt 5042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 382
Target Start/End: Complemental strand, 9137142 - 9136770
Alignment:
Q  10 ggacatcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctgga 109  Q
    ||||||| || ||| ||| ||| || ||||||||||||||||| |||||||| |||||||||||||| || ||||| ||||  |||||||| ||||| ||    
T  9137142 ggacatcgctcgaaacaagtgttaaaaagcaagtgatagagctcctcaaagagtatgttgatgtgtttgcctggtcctaccaagatatgccgggtctaga 9137043  T
Q  110 tactgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaa 209  Q
     |||||||| |||||||| ||  | |||||||| |||||||||| ||||||||| || || ||||||||||| |||||||| |||||||| || ||||||    
T  9137042 cactgatattgtggtacatcacctacctttaaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaa 9136943  T
Q  210 gaggaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaag 309  Q
    || || || |||||||||||||| || ||||||||| |||||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || |    
T  9136942 gaagaggtacagaaacagatcgacgctggtttcctcattacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaagg 9136843  T
Q  310 tcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
    |||||||||| ||||| ||||||||  ||||||||||||| || ||||| || || || || |||||||||||    
T  9136842 tcagaatgtgtgttgactaccgtgatttaaacaaagctagcccgaaagacgactttcctttacctcatattga 9136770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 18119001 - 18119251
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || ||||    
T  18119001 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatg 18119100  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||| || ||    
T  18119101 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcggga 18119200  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  18119201 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 18119251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 135 - 385
Target Start/End: Complemental strand, 18213333 - 18213083
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || ||||    
T  18213333 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatg 18213234  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| ||| |||||||||| |||||||| || ||    
T  18213233 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaaatcagaatgtgtgttgattatcggga 18213134  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  18213133 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 18213083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 23972436 - 23972184
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| ||| |||||||||  ||||| |||||||||||||||||| ||| ||| |||||| | || || ||||||||||||||||  || ||||| ||    
T  23972436 tgcctttgaagtctgagtgtcctccagtaaagcagaaattgagaagatctcatcccgatatgaccctcaaaatcaaagaggaagtgcgaaagcagattga 23972337  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | || ||||||||| | ||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||| ||     
T  23972336 tgcaggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcccgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgg 23972237  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| ||||||| || ||||| ||||||||    
T  23972236 gacttgaacaaggctagtccgaaggataatttccctttacctcacattgatgt 23972184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 120 - 385
Target Start/End: Original strand, 27544419 - 27544684
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||||||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  27544419 gtggaacaccgtttgcctttaaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 27544518  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || |||||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  27544519 gaaagcaaattgatgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 27544618  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  27544619 tgttgactatcgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 27544684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 120 - 385
Target Start/End: Original strand, 25706604 - 25706869
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| ||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| ||||||||||||||||| |    
T  25706604 gtggaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctgaagatcaaagaggaagtac 25706703  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      ||  | || || ||||||||| | ||||| ||  |||| ||||| ||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  25706704 gaaaggaaattgacgcaggtttcttggttacctccgaatatcctcagtggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 25706803  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  25706804 tgttgactatcgggatttgaacaaagctagtccaaaggatgatttccctttacctcacattgatgt 25706869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 385
Target Start/End: Complemental strand, 27270246 - 27270001
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||||||| ||||||||||| |||||||| ||| ||||| || || ||||| ||||| ||    
T  27270246 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcgtccagatatggctctcaagatcaa-gagcgaagttcaaaagcagattgatgcggg 27270148  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||||||||| | | | |||||     
T  27270147 tttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgcgttgacttcagagacctg 27270048  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||||||||| |||||  | || ||||| ||||||||||||||    
T  27270047 aacaaagctagtccaaaagacaactttccattacctcatattgatgt 27270001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 385
Target Start/End: Complemental strand, 27288023 - 27287778
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| | ||| ||||||||| |||||||| ||||||||||| |||||||| ||| ||||| || || ||||| ||||| ||    
T  27288023 aaagcctgaatgtcctcccgtcaggtagagattgagaaggactcgtccagatatggctctcaagatcaa-gagcgaagttcaaaagcagattgatgcggg 27287925  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||||||| | |||    |||||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||||||||| | | | |||||     
T  27287924 tttcctcatgacagttgaataccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgcgttgacttcagagacctg 27287825  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||||||||| |||||  | || ||||| ||||||||||||||    
T  27287824 aacaaagctagtccaaaagacaactttccattacctcatattgatgt 27287778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 15421978 - 15421734
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  15421978 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 15421880  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  15421879 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 15421780  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  15421779 acaaagctagtccaaaagacaactttccattacctcatattgatgt 15421734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 385
Target Start/End: Complemental strand, 27627346 - 27627125
Alignment:
Q  164 gcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccc 262  Q
    ||||||||||||||| |||| ||| |||||||||||||||||  ||||| || || || |||||||| ||||| ||||||||| | |||    |||||||    
T  27627346 gcagaaattgagaaggactcatccagatatggctcttaagat-taagagtgaggttcaaaaacagattgatgcgggtttcctcatgacagttgaataccc 27627248  T
Q  263 tcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgat 362  Q
    | ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |||||||| ||||| |||||        
T  27627247 tgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttgaacaaagccagtccaaaagacagc 27627148  T
Q  363 ttcccattgcctcatattgatgt 385  Q
    |||||||| ||||||||||||||    
T  27627147 ttcccattacctcatattgatgt 27627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 26991431 - 26991675
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  26991431 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 26991529  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || | | ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  26991530 ttcctcatgacagttgagtatcgtgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 26991629  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  26991630 acaaagctagtccaaaagacaactttccattacctcatattgatgt 26991675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 27021674 - 27021918
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  27021674 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 27021772  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  27021773 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 27021872  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  27021873 acaaagccagtccaaaagacaactttccattacctcatattgatgt 27021918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 20163176 - 20163402
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||| ||||| || || ||||| ||||| ||||||||||| ||| | |||    |     
T  20163176 gtcaggcagaaattgagaagaactcgtccagatatggctctcaagatc-aagagtgaggttcagaagcagattgatgcaggttttctcatgacagtcgag 20163274  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| | ||| | ||||| || |||||||| || ||||||||||| |||||  | ||||| ||||| | | | ||||| |||| ||| ||||| ||||    
T  20163275 tatcctaagtgggttgccaatattgtacctgtgccaaagaaggatgggaaagttcggatgtgtgttgacttcagagacctgaacagagccagtccaaaag 20163374  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | |||||||| ||||||||||||||    
T  20163375 acaacttcccattacctcatattgatgt 20163402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 385
Target Start/End: Complemental strand, 22169655 - 22169429
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||| ||||| || || ||||| ||||| ||||||||||| ||| | |||    |     
T  22169655 gtcaggcagaaattgagaagaactcgtccagatatggctctcaagatc-aagagtgaggttcagaagcagattgatgcaggttttctcatgacagtcgag 22169557  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| | ||| | ||||| || |||||||| || ||||||||||| |||||  | ||||| ||||| | | | ||||| |||| ||| ||||| ||||    
T  22169556 tatcctaagtgggttgccaatattgtacctgtgccaaagaaggatgggaaagttcggatgtgtgttgacttcagagacctgaacagagccagtccaaaag 22169457  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | |||||||| ||||||||||||||    
T  22169456 acaacttcccattacctcatattgatgt 22169429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 22932542 - 22932298
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  22932542 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 22932444  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| | ||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  22932443 ttcctcatgacagttgagtaccctgagtgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 22932344  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  22932343 acaaagccagtccaaaagacaactttccattacctcatattgatgt 22932298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 23854987 - 23854743
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  23854987 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 23854889  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| | ||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  23854888 ttcctcatgacagttgagtaccctgagtgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 23854789  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  23854788 acaaagccagtccaaaagacaactttccattacctcatattgatgt 23854743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 29552095 - 29552339
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  29552095 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 29552193  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | ||     |||||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | || || |    
T  29552194 ttcctcatgacggttgaataccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagatctga 29552293  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  29552294 acaaagccagtccaaaagacaactttccattacctcatattgatgt 29552339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 34462164 - 34461920
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| || ||||| || ||||||||  | ||||| || || ||||| ||||||||||    
T  34462164 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagacatggccctcaagatcaagaatgaagtccaaaagcagattgatgcaggtt 34462065  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | |||||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  34462064 tcctcatgacagttgagtaccctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 34461965  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || || || ||||||||||||||    
T  34461964 caaagccagtccgaaagacaactttccgttacctcatattgatgt 34461920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 385
Target Start/End: Original strand, 24866277 - 24866498
Alignment:
Q  164 gcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccc 262  Q
    ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||| | |||    | |||||    
T  24866277 gcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggtttcctcatgacagttgagtaccc 24866375  T
Q  263 tcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgat 362  Q
    | ||||| | ||||| || |||||||| || ||||| ||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  |     
T  24866376 tgaatgggttgccaatattgtacctgtgccaaagaaagatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaac 24866475  T
Q  363 ttcccattgcctcatattgatgt 385  Q
    || ||||| ||||||||||||||    
T  24866476 tttccattacctcatattgatgt 24866498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 13296609 - 13296365
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  13296609 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 13296511  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | |||||  |||| | | | ||||| |    
T  13296510 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtattgacttcagagacctga 13296411  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || | ||| ||||||||||||||    
T  13296410 acaaagccagtccaaaagacaactttcaattacctcatattgatgt 13296365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 26920915 - 26921159
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||| ||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  26920915 aagcctgaatgtcctcccgtcaggcaaaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 26921013  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || |||||||| || |||||| | ||||| ||||| | | | ||||| |    
T  26921014 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggacggtaaagtccggatgtgtgttgacttcagagacctga 26921113  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  26921114 acaaagccagtccaaaagacaactttccattacctcatattgatgt 26921159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 30555674 - 30555570
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  30555674 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 30555575  T
Q  241 tcctc 245  Q
    |||||    
T  30555574 tcctc 30555570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 4775418 - 4775662
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  4775418 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 4775516  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |    
T  4775517 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttga 4775616  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  4775617 acaaagccagtccaaaagacaactttccattacctcatattgatgt 4775662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 26114070 - 26113853
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| |||||||||||| || |||| |||||||||||| || ||||| ||  | ||||| || || ||||| ||||| ||||    
T  26114070 aagcctgaatgtcctcccgtcaggcagaaattgaggaggactcatcctgatatggccctcaagattaagaatgaagttcaaaagcagattgatgcgggtt 26113971  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | |||||  ||||| | ||||| || || ||||| |||||||||||||| |||||| | ||||| ||||||| | | ||| | ||    
T  26113970 tcctcatgacagttgagtaccccgaatgggttgccaatattgtgcctgtgccgaagaaggatggtaaagtccggatgtgtgttgatttcagggacttgaa 26113871  T
Q  341 caaagctagtcccaaaga 358  Q
    |||||| ||||| |||||    
T  26113870 caaagccagtccaaaaga 26113853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 4543432 - 4543188
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| |||||||||||| || |||| |||||| ||||| || ||||||||  | ||||| || || ||||||||||| ||||    
T  4543432 aagcctgaatgtcctcccgtcaggcagaaattgaggaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagatcgatgcgggtt 4543333  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  4543332 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 4543233  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  4543232 caaagccagtccaaaagacaactttccattacctcatattgatgt 4543188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 4760301 - 4760545
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  4760301 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 4760400  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  4760401 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 4760500  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||| |||||  | || ||||| ||||||||||||||    
T  4760501 caaggccagtccaaaagacaactttccattacctcatattgatgt 4760545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 385
Target Start/End: Original strand, 16752476 - 16752603
Alignment:
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    |||||| ||||| | ||||| || |||||||| || |||||||| || |||||| | ||||| ||||| | | | |||||||||||||| ||||| ||||    
T  16752476 taccctgaatgggttgccaatattgtacctgtgccaaagaaggacggtaaagtccggatgtgtgttgacttcagagacctaaacaaagccagtccaaaag 16752575  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  16752576 acaactttccattacctcatattgatgt 16752603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 27010269 - 27010513
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  27010269 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcccgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 27010367  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  27010368 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacctga 27010467  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| || ||  | || ||||| ||||||||||||||    
T  27010468 acaaagccagtccaaaggacaactttccattacctcatattgatgt 27010513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 27487671 - 27487775
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  27487671 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 27487769  T
Q  240 ttcctc 245  Q
    ||||||    
T  27487770 ttcctc 27487775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 28209992 - 28210209
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| |||||||||||| || |||| |||||| ||||| || ||||||||  | ||||| || || ||||||||||| ||||    
T  28209992 aagcctgaatgtcctcccgtcaggcagaaattgaggaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagatcgatgcgggtt 28210091  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| |||||||||||||| |||||  | ||||| ||||||| | | ||| | ||    
T  28210092 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccgaagaaggatggtaaagttcggatgtgtgttgatttcagggacttgaa 28210191  T
Q  341 caaagctagtcccaaaga 358  Q
    |||||| ||||| |||||    
T  28210192 caaagccagtccaaaaga 28210209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 27046925 - 27046989
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  27046925 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 27046989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 29575552 - 29575616
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  29575552 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 29575616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 17090083 - 17090037
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||||||||||||||| |||| ||| ||||||||||| |||||    
T  17090083 gtcaagcagaaattgagaaggactcatccagatatggctctcaagat 17090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 4721793 - 4721576
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| |||||||||||| || |||| |||||| ||||| || ||||| ||  | ||||| || || ||||||||||| ||||    
T  4721793 aagcctgaatgtcctcccgtcaggcagaaattgaggaggactcatcctgacatggccctcaagatgaagaatgaagttcaaaagcagatcgatgcgggtt 4721694  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| |||||||||||||| |||||  | ||||| ||||||| | | ||| | ||    
T  4721693 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccgaagaaggatggtaaagttcggatgtgtgttgatttcagggacttgaa 4721594  T
Q  341 caaagctagtcccaaaga 358  Q
    |||||| ||||| |||||    
T  4721593 caaagccagtccaaaaga 4721576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 16941685 - 16941621
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||    
T  16941685 aagcctgaatgtcctcctgtcaggcagaaattgagaaggactcatccggatatggctctcaagat 16941621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 29503954 - 29504018
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||| ||||||||||| |||| ||||||||||||||| |||||    
T  29503954 aagcctgaatgtcctcccgtcaggcaaaaattgagaaggactcatcctgatatggctctcaagat 29504018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 36 - 382
Target Start/End: Complemental strand, 5629818 - 5629472
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  5629818 aagcaagtgatagagcttctcaaagaatatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 5629719  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    |||| || ||||| |||| ||||||||| || |||||||||||||| |||||||| |||||||| || |||||||| || || ||||| |||||||| ||    
T  5629718 ctttgaaacctgaatgtccgccagtcaaacaaaaattgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaagcagatcgacgc 5629619  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
    |||||||||| | |||||||| ||||| |||||| |||| |||||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||     
T  5629618 aggtttcctcatcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaatgtgtgttgactaccgtgat 5629519  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  5629518 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 5629472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 22488556 - 22488808
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| |||||||||||||  ||  | |||||||||||||||||| ||| ||| |||||||| || ||||||||||||||||| |  || ||||| ||    
T  22488556 tgcctttgaagcctgagtgtcctccgataaagcagaaattgagaagatctcatccagatatggccctcaagatcaaagaggaagtacgaaagcagattga 22488655  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    ||||||||||||||| |||||| | |||||||| ||| | ||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||| ||     
T  22488656 tgcaggtttcctcgtcacatcagagtaccctcagtggttggccaacatagtgcccgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgg 22488755  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| |||||| ||||||| || ||||| ||||||||    
T  22488756 gacttgaacaaggctagtccgaaagataatttccctttacctcacattgatgt 22488808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 28587528 - 28587632
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  28587528 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 28587627  T
Q  241 tcctc 245  Q
    |||||    
T  28587628 tcctc 28587632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 51640761 - 51640865
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  51640761 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 51640860  T
Q  241 tcctc 245  Q
    |||||    
T  51640861 tcctc 51640865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 10947620 - 10947724
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| || || ||||    
T  10947620 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgacgcgggtt 10947719  T
Q  241 tcctc 245  Q
    |||||    
T  10947720 tcctc 10947724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 385
Target Start/End: Complemental strand, 41791007 - 41790781
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||  | |||    |     
T  41791007 gtcaggcagaaattgagaaggactcatcccgatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggtttcctaatgacagttgag 41790909  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| ||||    
T  41790908 tatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaag 41790809  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  41790808 acaactttccattacctcatattgatgt 41790781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 10965208 - 10965449
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||| |||||  ||||| || || || || || |||||||| |||    
T  10965208 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggctctcaagat-taagagcgaggttcaaaagcaaatcgatgcgggt 10965306  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  10965307 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 10965406  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
    ||||||| ||||| |||||  | || ||||| |||||||||||    
T  10965407 acaaagccagtccaaaagacaactttccattacctcatattga 10965449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 20463651 - 20463763
Alignment:
Q  273 gccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgc 372  Q
    ||||| || |||| ||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |||||||| ||||| |||||  | |||||||| |    
T  20463651 gccaatattgtacttgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctgaacaaagccagtccaaaagacaacttcccattac 20463750  T
Q  373 ctcatattgatgt 385  Q
    | |||||||||||    
T  20463751 cccatattgatgt 20463763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 382
Target Start/End: Original strand, 28606 - 28952
Alignment:
Q  36 aagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgc 135  Q
    ||||||||||||||||| |||||||| |||||||||||||| || ||||| ||||  |||||||| ||||| || |||||||| |||||||| ||  | |    
T  28606 aagcaagtgatagagctcctcaaagagtatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtacatcacctac 28705  T
Q  136 ctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgc 235  Q
    ||||||| |||||||||| ||||||||| || || ||||||||||| |||||||| |||||||| || |||||||| || || |||||||||||||| ||    
T  28706 ctttaaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgc 28805  T
Q  236 aggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgac 335  Q
     ||||||||| |||||||||| ||||| || ||| |||| |||||||| |||||||| ||||| ||||| || ||||||| ||| ||||| ||||||||     
T  28806 tggtttcctcattacatcaaattacccccagtggttagctaacatagtgcctgttccaaagaaagatggtaaggtcagaacgtgtgttgactaccgtgat 28905  T
Q  336 ctaaacaaagctagtcccaaagatgatttcccattgcctcatattga 382  Q
     ||||||||||||| || ||||| || || || || |||||||||||    
T  28906 ttaaacaaagctagcccgaaagacgactttcctttacctcatattga 28952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 48 - 385
Target Start/End: Original strand, 19766800 - 19767137
Alignment:
Q  48 gagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgcctttaaagcctg 147  Q
    |||||| ||| ||||||||||||| | ||||| ||||| |||   || ||||| ||||| ||  ||||| |||| | ||||    ||||||| |||||||    
T  19766800 gagcttatcagagaatatgttgatatattcgcatggtcatacaaagacatgccgggtctagaccctgatgtcgttgaacacagactgcctttgaagcctg 19766899  T
Q  148 agtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgt 247  Q
    ||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || || || |||||||||||||| ||    
T  19766900 agtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcaaattgatgcaggtttcctagt 19766999  T
Q  248 tacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagct 347  Q
     |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||| | ||||| |||    
T  19767000 cacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgggacttgaacaaggct 19767099  T
Q  348 agtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||| || ||| |||| || |||||||| ||||||||    
T  19767100 agtccgaaggataattttcctttgcctcacattgatgt 19767137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 385
Target Start/End: Complemental strand, 14726607 - 14726270
Alignment:
Q  48 gagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatactgatatcgtggtacaccatttgcctttaaagcctg 147  Q
    |||||| ||| ||||||||||||| | ||||| ||||| |||   || ||||| ||||| ||  ||||| |||| | ||||    ||||||| |||||||    
T  14726607 gagcttatcagagaatatgttgatatattcgcatggtcatacaaagacatgccgggtctagaccctgatgtcgttgaacacagactgcctttgaagcctg 14726508  T
Q  148 agtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgt 247  Q
    |||||   || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| |||||||||||||| ||    
T  14726507 agtgttctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattgatgcaggtttcctggt 14726408  T
Q  248 tacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagct 347  Q
     || ||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||| | ||||| |||    
T  14726407 cacgtcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgggacttgaacaaggct 14726308  T
Q  348 agtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||| || ||| |||| || || ||||| ||||||||    
T  14726307 agtccgaaggataattttcctttacctcacattgatgt 14726270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 385
Target Start/End: Complemental strand, 1882835 - 1882570
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||| ||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  1882835 gtggaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 1882736  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || || |||||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  1882735 gaaagcaaattgatgcaggtttcttgattacctccgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 1882636  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  1882635 tgttgactatcgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 1882570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 385
Target Start/End: Complemental strand, 22147295 - 22147040
Alignment:
Q  131 tttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatc 230  Q
    ||||||| ||||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||  || || ||     
T  22147295 tttgcctctaaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgcgaaagcaaatt 22147196  T
Q  231 gatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatg-tgcgttgattac 329  Q
    || ||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||||||||| ||||| || ||||||||| || ||||| ||     
T  22147195 gacgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccgaagaaagatggtaaggtcagaatgttgtgttgactat 22147096  T
Q  330 cgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  22147095 cgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 22147040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 17015600 - 17015844
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  17015600 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 17015698  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  17015699 ttcctcatgacagtggagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 17015798  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  17015799 acaaagctagtccaaaagacaactttccattacctcatattgatgt 17015844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 14667570 - 14667814
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  14667570 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 14667668  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  14667669 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 14667768  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  14667769 acaaagccagtccaaaagacaactttccattacctcatattgatgt 14667814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 18798329 - 18798085
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||| || ||| || || || || ||||| ||||| |||    
T  18798329 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagattaa-gagcgaggttcaaaagcagattgatgcgggt 18798231  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| ||||||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18798230 ttcctcatgacagttgagtaccctgaatgggttgccaatatagtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18798131  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18798130 acaaagccagtccaaaagacaactttccattacctcatattgatgt 18798085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 14761021 - 14760777
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  14761021 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctaaagattaa-gagcgaggttcaaaaacagattgatgcgggt 14760923  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  14760922 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 14760823  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  14760822 acaaagccagtccaaaagacaactttccattacctcatattgatgt 14760777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 24590076 - 24589832
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  24590076 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 24589978  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  24589977 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 24589878  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  24589877 acaaagccagtccaaaagacaactttccattacctcatattgatgt 24589832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 34186675 - 34186431
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||||||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||     
T  34186675 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcgtccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggc 34186577  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  34186576 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 34186477  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  34186476 acaaagccagtccaaaagacaactttccattacctcatattgatgt 34186431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 6572412 - 6572656
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| || || || ||| || || || |||||||| ||||| |||    
T  6572412 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaaaattaa-gagcgaggttcaaaaacagattgatgcgggt 6572510  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  6572511 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 6572610  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  6572611 acaaagccagtccaaaagacaactttccattacctcatattgatgt 6572656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 24115216 - 24115460
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||| ||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  24115216 aagcctgaatgtcctcccgtcaggcaaaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 24115314  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  24115315 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 24115414  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  24115415 acaaagccagtccaaaagacaactttccattacctcatattgatgt 24115460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 36342232 - 36341988
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| |||    
T  36342232 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctaaagattaa-gagcgaggttcaaaagcagattgatgcgggt 36342134  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || || |||||||| |||||| | ||||| ||||| | | | ||||| |    
T  36342133 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgcccaaaaaggatggtaaagtccggatgtgtgttgacttcagagacctga 36342034  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||| | || ||||| ||||||||||||||    
T  36342033 acaaagccagtccaaaagataactttccattacctcatattgatgt 36341988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 54835945 - 54836189
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || ||||| ||||| |||    
T  54835945 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcagattgatgcgggt 54836043  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | || || |    
T  54836044 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagatctga 54836143  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  54836144 acaaagccagtccaaaagacaactttccattacctcatattgatgt 54836189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 5008429 - 5008673
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||| |||||| ||||| || || || || || || ||||| |||    
T  5008429 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggctctcaagatc-aagagcgaggttcaaaagcaaattgatgcgggt 5008527  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || ||||| || |||||||||||||| |||||| | ||||||||||| | | | ||| | |    
T  5008528 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtaccagtgccgaagaaggatggtaaagtccggatgtgcgttgacttcagggacttga 5008627  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  5008628 acaaagccagtccaaaagacaactttccattacctcatattgatgt 5008673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 21972255 - 21972359
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  21972255 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 21972354  T
Q  241 tcctc 245  Q
    |||||    
T  21972355 tcctc 21972359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 385
Target Start/End: Complemental strand, 15282644 - 15282399
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| ||    
T  15282644 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggttcaaaagcagattgatgcggg 15282546  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||| ||| | |||    | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | || || ||||| | | | |||||     
T  15282545 ttttctcatgacagtcgagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggaaaagtccggatatgtgttgacttcagagacctg 15282446  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  |||||||||| || |||||||||||    
T  15282445 aacaaagccagtccaaaagacaatttcccattaccccatattgatgt 15282399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 39853191 - 39853408
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  39853191 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 39853289  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  39853290 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgcccaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 39853389  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  39853390 acaaagccagtccaaaaga 39853408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 14101097 - 14101341
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  14101097 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 14101196  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  14101197 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 14101296  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  14101297 caaagccagtccaaaagacaactttccattacctcatattgatgt 14101341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 385
Target Start/End: Complemental strand, 15389069 - 15388849
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctc 264  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||  | || || || |||||||| ||||| ||||| ||| | |||    | || |||     
T  15389069 cagaaattgagaaggactcgtccagatatggctctcaagattaagaatgaggttcaaaaacagattgatgcgggttttctcatgacagtcgagtatcctg 15388970  T
Q  265 aatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgattt 364  Q
    ||||| | |||||||| ||||| || || ||||| ||||| |||||  | ||||| ||||||||| | ||  | || || ||||||| ||||||  ||||    
T  15388969 aatgggttgccaacattgtacccgtgccaaagaaagatgggaaagttcggatgtgtgttgattacagggatttgaataaggctagtctcaaagacaattt 15388870  T
Q  365 cccattgcctcatattgatgt 385  Q
    ||| |||||||| ||||||||    
T  15388869 ccctttgcctcacattgatgt 15388849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 31124227 - 31124123
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| || | ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  31124227 aagcctgaatgtcctcccgtcaggcagaaattgagaaggacccatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 31124128  T
Q  241 tcctc 245  Q
    |||||    
T  31124127 tcctc 31124123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 40103352 - 40103248
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  40103352 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 40103253  T
Q  241 tcctc 245  Q
    |||||    
T  40103252 tcctc 40103248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 1902806 - 1903052
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || || ||||| ||||| ||    
T  1902806 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagtgaggttcaaaagcagattgatgcggg 1902904  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaac-atagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacct 337  Q
    ||| ||| | |||    | || ||| ||||| | |||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | |||||    
T  1902905 ttttctcatgacagtcgagtatcctgaatgggttgccaaccattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacct 1903004  T
Q  338 aaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     |||||||| ||||| |||||  | |||||||| || |||||||||||    
T  1903005 gaacaaagccagtccaaaagacaacttcccattaccccatattgatgt 1903052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 18314893 - 18314789
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  18314893 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 18314795  T
Q  240 ttcctc 245  Q
    ||||||    
T  18314794 ttcctc 18314789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 30756314 - 30756558
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  30756314 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 30756412  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | || || || || || || || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  30756413 ttcctcatgacagttgagtaccctgaatgggttgctaatattgtgcccgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 30756512  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  30756513 acaaagccagtccaaaagacaactttccattacctcatattgatgt 30756558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 33671515 - 33671271
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || || || || ||||| |||    
T  33671515 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaagcaaattgatgcgggt 33671417  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||| ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||||||||| | | | ||| | |    
T  33671416 ttcctcatgacagttgagtatcctgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgcgttgacttcagggacttga 33671317  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  33671316 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 33671271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 15230426 - 15230670
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || || ||||| ||||| |||    
T  15230426 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagtgaggttcaaaagcagattgatgcgggt 15230524  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    || ||| | |||    | |  ||| ||||| | ||||| || |||||||| || ||||||||||| |||||  | ||||| ||||| | | | ||| | |    
T  15230525 tttctcatgacagttgagtgtcctgaatgggttgccaatattgtacctgtgccaaagaaggatggaaaagttcggatgtgtgttgacttcagagacttga 15230624  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | |||||||| ||||||||||||||    
T  15230625 acaaagccagtccaaaagacaacttcccattacctcatattgatgt 15230670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 22411470 - 22411722
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| ||| |||||||||  ||||| |||||||||||||||||| ||| ||| |||||||| || |||||||||||||||||||  || ||||| ||    
T  22411470 tgcctttgaagtctgagtgtcctccagtaaagcagaaattgagaagatctcatcccgatatggccctcaagatcaaagaggaagtgcgaaagcagattga 22411569  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||     
T  22411570 tgcaggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgg 22411669  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| ||||||| || ||||| ||||||||    
T  22411670 gacttgaacaaggctagtccgaaggataatttccctttacctcacattgatgt 22411722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 14211573 - 14211823
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||  || ||||| ||||    
T  14211573 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaagtgcgaaagcagattgatg 14211672  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| | ||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||| || ||    
T  14211673 caggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcggga 14211772  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| |||||||| || ||| |||| || |||||||| ||||||||    
T  14211773 cttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgt 14211823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 19843699 - 19843951
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| |||||||||||||  || || |||||||||||||||||| ||| ||| |||||||| || ||||| ||||| ||||||||||| || |||||    
T  19843699 tgcctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcccgatatggccctcaagattaaagaagaagtgcagaagcaaatcga 19843798  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | || ||||||||| | ||||||||||| || ||||||||||| || ||||||||||||||||| |||||||| ||     
T  19843799 tgcaggtttcctggtcacatcagagtatcctcaatggttggccaacatagtgcccgttccgaagaaagacggcaaagtcagaatgtgtgttgattatcgg 19843898  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| |||| || || ||||| || |||||    
T  19843899 gacatgaacaaggctagtccgaaggataattttcctttacctcacatcgatgt 19843951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 385
Target Start/End: Original strand, 16767842 - 16768107
Alignment:
Q  120 gtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgc 219  Q
    |||| ||||| ||||||||||||||| |||||||  |||||||||||||| || |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  16767842 gtggaacaccgtttgcctttaaagcccgagtgtcctccagtcaagcagaagttaagaagatctcatccagatatggctctcaagatcaaagaggaagtgc 16767941  T
Q  220 agaaacagatcgatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtg 319  Q
      || || ||  ||||||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  16767942 gaaagcaaatttatgcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagatggtaaggtcagaatgtg 16768041  T
Q  320 cgttgattaccgtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
     ||||| || || ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  16768042 tgttgactatcgggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 16768107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 27606581 - 27606337
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  27606581 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 27606483  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  27606482 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 27606383  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||||||||| |||||  | || ||||| ||||||||||||||    
T  27606382 acaaagctagtccaaaagacaactttccattacctcatattgatgt 27606337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 2134936 - 2134692
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  2134936 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 2134838  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  2134837 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 2134738  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  2134737 acaaagccagtccaaaagacaactttccattacctcatattgatgt 2134692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 14560164 - 14560408
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| | ||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  14560164 aagcctgaatgtcctcccgtcaggtagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 14560262  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||||| | | ||||| |    
T  14560263 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgatttcagagacctga 14560362  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  14560363 acaaagccagtccaaaagacaactttccattacctcatattgatgt 14560408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 18712024 - 18712268
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  18712024 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 18712122  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18712123 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18712222  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18712223 acaaagccagtccaaaagacaactttccattacctcatattgatgt 18712268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 16285982 - 16286227
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| ||    
T  16285982 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcggg 16286080  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
     |||||| | |||  | | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | |||||     
T  16286081 cttcctcatgacagtagagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctg 16286180  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  16286181 aacaaagccagtccaaaagacaactttccattacctcatattgatgt 16286227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 19690637 - 19690882
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcagg 238  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||| ||| ||||| ||    
T  19690637 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaactgattgatgcggg 19690735  T
Q  239 tttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||||||| | |||    | |||||| | ||| | ||||| || |||||||| |||||||||||||| |||||| | ||||| ||||| | | | |||||     
T  19690736 tttcctcatgacagttgagtaccctgagtgggttgccaatattgtacctgtgccgaagaaggatggtaaagtccggatgtgtgttgacttcagagacctg 19690835  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  19690836 aacaaagccagtccaaaagacaactttccattacctcatattgatgt 19690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 29831866 - 29832110
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  29831866 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 29831965  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  29831966 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 29832065  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||| |||||  | || ||||| ||||||||||||||    
T  29832066 caaggccagtccaaaagacaactttccattacctcatattgatgt 29832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 18793245 - 18793488
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  18793245 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 18793343  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| | ||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  18793344 ttcctcatgacagttgagtaccctga-tgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 18793442  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  18793443 acaaagccagtccaaaagacaactttccattacctcatattgatgt 18793488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 19206038 - 19205821
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||| ||||| || || || || || || ||||| |||    
T  19206038 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatc-aagagcgaggttcaaaagcaaattgatgcgggt 19205940  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || ||||| || || ||||||||||| |||||| ||||||| ||||| | | | ||| | |    
T  19205939 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtaccagtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagggacttga 19205840  T
Q  340 acaaagctagtcccaaaga 358  Q
    ||||||| ||||| |||||    
T  19205839 acaaagccagtccaaaaga 19205821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 19676987 - 19677231
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| || || ||||| ||||| |||    
T  19676987 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat-taagagtgaagttcaaaagcagattgatgcgggt 19677085  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  19677086 ttcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 19677185  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  19677186 acaaggccagtccaaaagacaactttccattacctcatattgatgt 19677231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 31357068 - 31357312
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||||||| ||||||||||| |||| |||||| ||||| || ||||| || ||| || || || || ||||| ||||| |||    
T  31357068 aagcctgaatgtcctcccgtcaagcaaaaattgagaaggactcatcctgacatggccctcaagattaa-gagcgaggttcaaaagcagattgatgcgggt 31357166  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  31357167 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 31357266  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  31357267 acaaggccagtccaaaagacaactttccattacctcatattgatgt 31357312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 9357165 - 9357409
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| || ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  9357165 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 9357264  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  9357265 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 9357364  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  9357365 caaagccagtccaaaagacaactttccattacctcatattgatgt 9357409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 385
Target Start/End: Complemental strand, 31487524 - 31487303
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaa-cagatcgatgcaggtttcctcgttacatcaaaataccc 262  Q
    |||||||||||||| |||||||||||||||||||| |||||  ||||| || || || ||| || || ||||| ||||||||| | |||    | |||||    
T  31487524 cagaaattgagaaggactcgtcctgatatggctctcaagat-taagagcgaggttcaaaaagcaaattgatgcgggtttcctcatgacagttgagtaccc 31487426  T
Q  263 tcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgat 362  Q
    | ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |||||||| ||||| |||||  |     
T  31487425 tgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaacaaagccagtccaaaagacaac 31487326  T
Q  363 ttcccattgcctcatattgatgt 385  Q
    || ||||| ||||||||||||||    
T  31487325 tttccattacctcatattgatgt 31487303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 12090399 - 12090182
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| |||||||||||| || |||| |||||| ||||| || ||||||||  | ||||| || || ||||||||||| ||||    
T  12090399 aagcctgaatgtcctcccgtcaggcagaaattgaggaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagatcgatgcgggtt 12090300  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| |||||||||||||| |||||  | ||||| ||||||| | | ||| | ||    
T  12090299 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccgaagaaggatggtaaagttcggatgtgtgttgatttcagggacttgaa 12090200  T
Q  341 caaagctagtcccaaaga 358  Q
    |||||| ||||| |||||    
T  12090199 caaagccagtccaaaaga 12090182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 385
Target Start/End: Complemental strand, 22078563 - 22078343
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccctc 264  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||  | || || || ||| |||| ||||| ||||| ||| | |||    | || |||     
T  22078563 cagaaattgagaaggactcgtccagatatggctctcaagattaagaatgaggttcaaaaatagattgatgcgggttttctcatgacagtcgagtatccta 22078464  T
Q  265 aatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgattt 364  Q
    ||||| | |||||||| ||||| || || ||||| ||||| |||||  | ||||| ||||||||| | ||  | || || ||||||| ||||||  ||||    
T  22078463 aatgggttgccaacattgtacccgtgccaaagaaagatgggaaagttcggatgtgtgttgattacagggatttgaataaggctagtctcaaagacaattt 22078364  T
Q  365 cccattgcctcatattgatgt 385  Q
    ||| |||||||| ||||||||    
T  22078363 ccctttgcctcacattgatgt 22078343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 33261274 - 33261338
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  33261274 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagat 33261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 358
Target Start/End: Complemental strand, 28359604 - 28359411
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccct 263  Q
    |||||||||||||| |||| ||||||||||||||| |||||  ||||| || || || |||||||| ||||| ||||||||  | |||    | ||||||    
T  28359604 cagaaattgagaaggactcatcctgatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggtttcctaatgacagttgagtaccct 28359506  T
Q  264 caatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaaga 358  Q
     ||||| | ||||| || ||||| || || |||||||| || |||||| ||||||| ||||| | | | ||| | |||||||| ||||| |||||    
T  28359505 gaatgggttgccaatattgtaccagtgccaaagaaggagggtaaagtccgaatgtgtgttgacttcagggacttgaacaaagccagtccaaaaga 28359411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 49689 - 49941
Alignment:
Q  133 tgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcga 232  Q
    ||||||| |||||||||||||  || || |||||||||||||||||| ||| ||| || ||||| || |||||||||||||||||||  |||||||| ||    
T  49689 tgcctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcccgagatggccctcaagatcaaagaggaagtgcgcaaacagattga 49788  T
Q  233 tgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgt 332  Q
    |||||||||||| || |||||| | || ||||| ||| | ||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||| ||     
T  49789 tgcaggtttcctggtcacatcagagtaacctcagtggttggccaacatagtgcccgttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgg 49888  T
Q  333 gacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| | ||||| |||||||| || ||| |||||||||| ||||| ||||||||    
T  49889 gacttgaacaaggctagtccgaaggataatttcccattacctcacattgatgt 49941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 9753 - 10003
Alignment:
Q  135 cctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatg 234  Q
    ||||| |||||||||||||  || || |||||||||||||||||| ||| |||||||||||| || |||||||||||||| ||||  || ||||| ||||    
T  9753 cctttgaagcctgagtgtcctccggtaaagcagaaattgagaagatctcatcctgatatggccctcaagatcaaagaggaggtgcgaaagcagattgatg 9852  T
Q  235 caggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtga 334  Q
    |||||||||| || |||||| | || ||||||||| ||||||||||||| |||||||| || || |||||||||||||||||||| |||||||| || ||    
T  9853 caggtttcctagtcacatcagagtatcctcaatggttagccaacatagtgcctgttccaaaaaaagatggcaaagtcagaatgtgtgttgattatcggga 9952  T
Q  335 cctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | | ||||| | |||||| || ||| |||| || |||||||| ||||||||    
T  9953 cttgaacaagggtagtccgaaggataattttcctttgcctcacattgatgt 10003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 3490 - 3310
Alignment:
Q  13 catcacttgaagcaaatgtcaagaagcaagtgatagagcttctcaaagaatatgttgatgtgttcgcttggtcgtaccgggatatgccaggtctggatac 112  Q
    |||| ||||||| || ||||||||||   ||||||||||||||||||||||||| ||  ||| | ||||| |||||||| |||||| | |||||||||||    
T  3490 catcgcttgaagaaagtgtcaagaagtgggtgatagagcttctcaaagaatatggtgtcgtgct-gcttgatcgtaccgagatatgtcgggtctggatac 3392  T
Q  113 tgatatcgtggtacaccatttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatg 194  Q
    |||||| ||||| ||||||||||| || ||||||||||||| || |||||||||||||||||||||||| |||||| |||||    
T  3391 tgatattgtggtgcaccatttgcccttgaagcctgagtgtccgctagtcaagcagaaattgagaagaacccgtcctaatatg 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 385
Target Start/End: Complemental strand, 5640 - 5386
Alignment:
Q  131 tttgcctttaaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatc 230  Q
    ||||||| ||||||| |||||||  ||||||||||| || || |||||| ||| ||| ||||||||||| |||||||||||||| |||   || || ||     
T  5640 tttgcctctaaagcccgagtgtcctccagtcaagcataagttaagaagatctcatccagatatggctctcaagatcaaagaggatgtgtgaaagcaaatt 5541  T
Q  231 gatgcaggtttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattacc 330  Q
    ||  |||||||| |  |||| ||  |||| ||||||||| | ||||||||||| || ||||||||||| ||||| || |||||||| || ||||| || |    
T  5540 gactcaggtttcttgattacctctgaatatcctcaatggttggccaacatagtgcccgttccgaagaaagatggtaaggtcagaatttgtgttgactatc 5441  T
Q  331 gtgacctaaacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    | ||  | |||||||||||||| || ||||||||||| || ||||| ||||||||    
T  5440 gggatttgaacaaagctagtccgaaggatgatttccctttacctcacattgatgt 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 12112 - 12356
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||| || ||| || || || || ||||| ||||| |||    
T  12112 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagattaa-gagcgaggttcaaaagcagattgatgcgggt 12210  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| ||||||||||| || ||||||||||| |||||| | ||||| ||||| | | | || || |    
T  12211 ttcctcatgacagttgagtaccctgaatgggttgccaatatagtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagatctga 12310  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  12311 acaaagccagtccaaaagacaactttccattacctcatattgatgt 12356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 29834 - 30078
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  29834 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 29932  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |    
T  29933 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccgaatgtgtgttgacttcagagacctga 30032  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || || || ||||||||||||||    
T  30033 acaaagccagtccaaaagacaactttccgttacctcatattgatgt 30078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 18609 - 18855
Alignment:
Q  140 aaagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggt 239  Q
    ||||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| ||   ||| || || || ||||| ||||| |||    
T  18609 aaagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaagagggaggttcaaaagcagattgatgcgggt 18708  T
Q  240 ttc-ctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgaccta 338  Q
    ||  ||| | |||    | || ||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | |||||     
T  18709 ttttctcatgacagtcgagtatcctgaatgggttgccaatattgtacctgtgccaaagaaggatggaaaagtccggatgtgtgttgacttcagagacctg 18808  T
Q  339 aacaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||||| ||||| |||||  |||||||||| ||||||||||||||    
T  18809 aacaaagccagtccaaaagacaatttcccattacctcatattgatgt 18855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 23906 - 23662
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| ||||||||  | ||||| || || ||||| ||||| ||||    
T  23906 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 23807  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | |||||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  23806 tcctcatgacagttgagtaccccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 23707  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  23706 caaagccagtccaaaagacaactttccattacctcatattgatgt 23662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 33019 - 33244
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||| ||||||||||||||| |||| |||  |||||||||| ||||| || ||| || || || |||||||| ||||| ||||||||| | |||    |     
T  33019 gtcaggcagaaattgagaaggactcatccaaatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggtttcctcatgacagttgag 33117  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| ||||||| ||||| | | | ||||| |||||||||||||| ||||    
T  33118 taccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtctgaatgtgtgttgacttcagagacctgaacaaagctagtccaaaag 33217  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | || ||||| ||||||||||||||    
T  33218 acaactt-ccattacctcatattgatgt 33244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 15122 - 15366
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||| ||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  15122 aagcctgaatgtcctcccgtcaggcaaaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 15220  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  15221 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 15320  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||| |||||  | || ||||| ||||||||||||||    
T  15321 acaaagccagtccaaaagacaactttccattacctcatattgatgt 15366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 44706 - 44462
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| ||||| || ||| || || || |||||||| ||||| |||    
T  44706 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagattaa-gagcgaggttcaaaaacagattgatgcgggt 44608  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| |    
T  44607 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctga 44508  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||||||| ||||  |||||  | || ||||| ||||||||||||||    
T  44507 acaaagccagtctaaaagacaactttccattacctcatattgatgt 44462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 2608 - 2852
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggt 239  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||  ||||| || || || |||||||| ||||| |||    
T  2608 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat-taagagcgaggttcaaaaacagattgatgcgggt 2706  T
Q  240 ttcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaa 339  Q
    |||||| | |||    | |||||| ||||| | ||||| || |||||||| || ||||||||||| |||||| | || || ||||| | | | ||||| |    
T  2707 ttcctcatgacagttgagtaccctgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatatgtgttgacttcagagacctga 2806  T
Q  340 acaaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||| || ||||| |||||  | || ||||| ||||||||||||||    
T  2807 acaaggccagtccaaaagacaactttccattacctcatattgatgt 2852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 37814 - 37750
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||| ||||||||||| |||||    
T  37814 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatccagatatggctctcaagat 37750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 6894 - 6650
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  6894 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 6795  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  6794 tcctcatgacagttgagtatcccgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 6695  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||| |||||  | || ||||| ||||||||||||||    
T  6694 caaggccagtccaaaagacaactttccattacctcatattgatgt 6650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 385
Target Start/End: Original strand, 22137 - 22381
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| ||||||||||||||| || |||||  | ||||| || || ||||| ||||| ||||    
T  22137 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgatatggctctcaaaatcaagaatgaagttcaaaagcagattgatgcgggtt 22236  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || |||||||| || ||||||||||| |||||| | ||||| ||||| | | | ||||| ||    
T  22237 tcctcatgacagttgagtatcccgaatgggttgccaatattgtacctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacctgaa 22336  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    ||| || ||||| |||||  | || ||||| ||||||||||||||    
T  22337 caaggccagtccaaaagacaactttccattacctcatattgatgt 22381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0748 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0748
Description:

Target: scaffold0748; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 385
Target Start/End: Complemental strand, 6362 - 6142
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctcgttacatcaaaataccct 263  Q
    ||||||||||||| |||||| || || |||||||| |||||| ||||| || |||||||| ||||| ||||| ||||||||| | |||    | || |||    
T  6362 cagaaattgagaataactcgcccagacatggctctcaagatc-aagagtgaggtgcagaagcagattgatgcgggtttcctcatgacagtcgagtatcct 6264  T
Q  264 caatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaagatgatt 363  Q
     | ||| | |||||||| || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | |||||||| ||||| |||||  | |    
T  6263 gagtgggttgccaacattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagagacttgaacaaagccagtccaaaagacaact 6164  T
Q  364 tcccattgcctcatattgatgt 385  Q
    | ||||| ||||||||||||||    
T  6163 ttccattacctcatattgatgt 6142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 385
Target Start/End: Complemental strand, 12643 - 12399
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||| || ||||||||  | ||||| || || ||||| ||||| ||||    
T  12643 aagcctgaatgtcctcccgtcaggcagaaattgagaaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagattgatgcgggtt 12544  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| || ||||||||||| |||||| | ||||| ||||| | | | ||| | ||    
T  12543 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccaaagaaggatggtaaagtccggatgtgtgttgacttcagggacttgaa 12444  T
Q  341 caaagctagtcccaaagatgatttcccattgcctcatattgatgt 385  Q
    |||||| ||||| |||||  | || ||||| ||||||||||||||    
T  12443 caaagccagtccaaaagacaactttccattacctcatattgatgt 12399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 10490 - 10707
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtgcagaaacagatcgatgcaggtt 240  Q
    |||||||| ||||  || |||| |||||||||||| || |||| |||||| ||||| || ||||||||  | ||||| || || ||||||||||| ||||    
T  10490 aagcctgaatgtcctcccgtcaggcagaaattgaggaggactcatcctgacatggccctcaagatcaagaatgaagttcaaaagcagatcgatgcgggtt 10589  T
Q  241 tcctcgttacatcaaaataccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaa 340  Q
    ||||| | |||    | || ||  ||||| | ||||| || || ||||| |||||||||||||| |||||  | ||||| ||||||| | | ||| | ||    
T  10590 tcctcatgacagttgagtatcccgaatgggttgccaatattgtgcctgtgccgaagaaggatggtaaagttcggatgtgtgttgatttcagggacttgaa 10689  T
Q  341 caaagctagtcccaaaga 358  Q
    |||||| ||||| |||||    
T  10690 caaagccagtccaaaaga 10707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 385
Target Start/End: Original strand, 8604 - 8830
Alignment:
Q  159 gtcaagcagaaattgagaagaactcgtcctgatatggctcttaagatcaaagaggaagtg-cagaaacagatcgatgcaggtttcctcgttacatcaaaa 257  Q
    |||||||||||||||||||| |||| ||  ||||||||||| ||||| || |||  || | || || ||||| ||||||||||| ||| | |||    |     
T  8604 gtcaagcagaaattgagaaggactcatctagatatggctctcaagattaa-gagtgagggtcaaaagcagattgatgcaggttttctcataacagtcgag 8702  T
Q  258 taccctcaatggctagccaacatagtacctgttccgaagaaggatggcaaagtcagaatgtgcgttgattaccgtgacctaaacaaagctagtcccaaag 357  Q
    || ||| ||||| | || ||||| |||||||| || |||||||||||  ||||| | ||||| ||||| | | | ||||| |||||||| | ||| ||||    
T  8703 tatcctgaatgggttgctaacattgtacctgtgccaaagaaggatggacaagtccggatgtgtgttgacttcagagacctgaacaaagccaatccaaaag 8802  T
Q  358 atgatttcccattgcctcatattgatgt 385  Q
    |  | |||||||| ||||||||||||||    
T  8803 acaacttcccattacctcatattgatgt 8830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1697
Description:

Target: scaffold1697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 119 - 39
Alignment:
Q  165 cagaaattgagaagaactcgtcctgatatggctcttaagatcaaagag-gaagtgcagaaacagatcgatgcaggtttcctc 245  Q
    |||||||||||||| |||| ||| ||||||||||| |||||  ||||| ||||| ||||| ||||| ||||| |||||||||    
T  119 cagaaattgagaaggactcatccagatatggctctcaagat-taagagtgaagttcagaagcagattgatgcgggtttcctc 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 8553 - 8617
Alignment:
Q  141 aagcctgagtgtctgccagtcaagcagaaattgagaagaactcgtcctgatatggctcttaagat 205  Q
    |||||||||||||  ||  ||| ||||||||||||||| |||| ||| ||||||||||| |||||    
T  8553 aagcctgagtgtcctcccatcaggcagaaattgagaaggactcatccagatatggctctcaagat 8617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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