View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6985_low_9 (Length: 280)
Name: NF6985_low_9
Description: NF6985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6985_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 39751022 - 39751276
Alignment:
| Q |
13 |
aatattaactaactaattgatttcatgtttcaatttagagcataggatatgcaacattggcaaaccttgctcctcaatatggactttgtaagctactttt |
112 |
Q |
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| T |
39751022 |
aatattaactaactaattgatttcatgtttcaatttagagcataggatatgcaacattggcaaaccttgctcctcaatatggactttgtaagctactttt |
39751121 |
T |
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| Q |
113 |
ttaaaatatatgtttttcttccccttatcttcttctaaggaaattatattataattgatttactttatatacaacttttgcgcaaaaataaaattacatt |
212 |
Q |
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| T |
39751122 |
ttaaaatatatgtttttcttccccttatcttcttctaaggaaattatattataattgatttactttatatacaacttttgcgcaaaaataaaattacatt |
39751221 |
T |
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| Q |
213 |
atcaattaattataactatatgatcataatcaatttgtgcggaatgaaatgaaat |
267 |
Q |
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| T |
39751222 |
atcaattaattataactatatgatcataatcaatttgtgcggaatgaaatgaaat |
39751276 |
T |
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