View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6986_high_2 (Length: 858)

Name: NF6986_high_2
Description: NF6986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6986_high_2
NF6986_high_2
[»] chr2 (12 HSPs)
chr2 (1-845)||(33241316-33242161)
chr2 (1-845)||(33249237-33250082)
chr2 (687-846)||(17564557-17564720)
chr2 (719-780)||(22996298-22996358)
chr2 (710-746)||(20416892-20416928)
chr2 (710-746)||(21171672-21171708)
chr2 (710-746)||(22751413-22751449)
chr2 (710-746)||(26868026-26868062)
chr2 (710-746)||(28731135-28731171)
chr2 (717-748)||(19312212-19312243)
chr2 (716-746)||(22764664-22764694)
chr2 (717-746)||(22454257-22454286)
[»] chr7 (11 HSPs)
chr7 (686-845)||(9763358-9763515)
chr7 (686-814)||(9803880-9804007)
chr7 (729-804)||(12597339-12597418)
chr7 (710-746)||(9160701-9160737)
chr7 (710-746)||(15887576-15887612)
chr7 (710-746)||(18420121-18420157)
chr7 (710-746)||(25214670-25214706)
chr7 (717-746)||(332456-332485)
chr7 (717-746)||(9709188-9709217)
chr7 (717-746)||(21696156-21696185)
chr7 (717-746)||(22577344-22577373)
[»] chr6 (12 HSPs)
chr6 (687-793)||(16742972-16743078)
chr6 (685-772)||(14171930-14172016)
chr6 (710-746)||(12359042-12359078)
chr6 (710-746)||(13913986-13914022)
chr6 (710-746)||(20059741-20059777)
chr6 (710-746)||(25734728-25734764)
chr6 (710-746)||(25794810-25794846)
chr6 (717-748)||(17782049-17782080)
chr6 (717-747)||(21625908-21625938)
chr6 (718-747)||(19483588-19483617)
chr6 (717-746)||(20112020-20112049)
chr6 (717-746)||(22802928-22802957)
[»] chr3 (21 HSPs)
chr3 (687-785)||(19642896-19642994)
chr3 (710-746)||(1054705-1054741)
chr3 (710-746)||(1793714-1793750)
chr3 (710-746)||(4405292-4405328)
chr3 (710-746)||(9005687-9005723)
chr3 (710-746)||(9390448-9390484)
chr3 (710-746)||(14320878-14320914)
chr3 (710-746)||(15226140-15226176)
chr3 (710-746)||(15661931-15661967)
chr3 (710-746)||(16670351-16670387)
chr3 (710-746)||(29905360-29905396)
chr3 (710-746)||(29946526-29946562)
chr3 (710-746)||(29995680-29995716)
chr3 (711-746)||(7803749-7803784)
chr3 (711-746)||(17909246-17909281)
chr3 (716-746)||(11215913-11215943)
chr3 (717-747)||(13120774-13120804)
chr3 (716-746)||(14008394-14008424)
chr3 (710-743)||(14582212-14582245)
chr3 (717-746)||(15834302-15834331)
chr3 (717-746)||(22141556-22141585)
[»] chr4 (9 HSPs)
chr4 (687-845)||(13306288-13306442)
chr4 (685-843)||(10327670-10327835)
chr4 (710-746)||(11516068-11516104)
chr4 (710-746)||(15206618-15206654)
chr4 (710-746)||(39520070-39520106)
chr4 (717-748)||(16818570-16818601)
chr4 (716-746)||(10291542-10291572)
chr4 (716-746)||(11536886-11536916)
chr4 (717-746)||(13575455-13575484)
[»] chr8 (9 HSPs)
chr8 (685-845)||(24497432-24497591)
chr8 (710-746)||(18154750-18154786)
chr8 (710-746)||(19225882-19225918)
chr8 (710-746)||(19419349-19419385)
chr8 (710-746)||(23371571-23371607)
chr8 (710-746)||(23468679-23468715)
chr8 (710-746)||(30324547-30324583)
chr8 (717-748)||(23784341-23784372)
chr8 (717-746)||(3597681-3597710)
[»] scaffold0022 (1 HSPs)
scaffold0022 (710-747)||(52786-52823)
[»] chr1 (7 HSPs)
chr1 (710-747)||(153536-153573)
chr1 (710-746)||(7680157-7680193)
chr1 (717-747)||(20883110-20883140)
chr1 (717-747)||(22643715-22643745)
chr1 (717-747)||(23067766-23067796)
chr1 (717-746)||(20953698-20953727)
chr1 (717-746)||(36134935-36134964)
[»] scaffold1002 (1 HSPs)
scaffold1002 (710-746)||(3168-3204)
[»] scaffold0739 (1 HSPs)
scaffold0739 (710-746)||(3040-3076)
[»] scaffold0497 (1 HSPs)
scaffold0497 (710-746)||(3190-3226)
[»] scaffold0411 (2 HSPs)
scaffold0411 (710-746)||(2368-2404)
scaffold0411 (710-746)||(6399-6435)
[»] scaffold0410 (1 HSPs)
scaffold0410 (710-746)||(7545-7581)
[»] scaffold0272 (1 HSPs)
scaffold0272 (710-746)||(12524-12560)
[»] scaffold0195 (1 HSPs)
scaffold0195 (710-746)||(30754-30790)
[»] scaffold0040 (1 HSPs)
scaffold0040 (710-746)||(70592-70628)
[»] scaffold0017 (2 HSPs)
scaffold0017 (710-746)||(176327-176363)
scaffold0017 (718-748)||(53103-53133)
[»] scaffold0016 (1 HSPs)
scaffold0016 (710-746)||(192922-192958)
[»] scaffold0014 (2 HSPs)
scaffold0014 (710-746)||(211533-211569)
scaffold0014 (710-746)||(217402-217438)
[»] scaffold0012 (2 HSPs)
scaffold0012 (710-746)||(20997-21033)
scaffold0012 (710-746)||(128636-128672)
[»] chr5 (12 HSPs)
chr5 (710-746)||(1110049-1110085)
chr5 (710-746)||(20561647-20561683)
chr5 (710-746)||(20797030-20797066)
chr5 (710-746)||(21415125-21415161)
chr5 (710-746)||(23405778-23405814)
chr5 (710-746)||(34061925-34061961)
chr5 (711-746)||(24927044-24927079)
chr5 (717-747)||(13524003-13524033)
chr5 (710-744)||(19477287-19477321)
chr5 (716-746)||(21519412-21519442)
chr5 (717-747)||(23479178-23479208)
chr5 (717-746)||(30743816-30743845)
[»] scaffold0547 (1 HSPs)
scaffold0547 (717-748)||(1696-1727)
[»] scaffold0185 (1 HSPs)
scaffold0185 (717-748)||(10123-10154)
[»] scaffold0080 (1 HSPs)
scaffold0080 (717-748)||(120-151)
[»] scaffold0073 (1 HSPs)
scaffold0073 (717-748)||(59283-59314)
[»] scaffold0752 (1 HSPs)
scaffold0752 (717-747)||(2831-2861)
[»] scaffold0203 (1 HSPs)
scaffold0203 (716-746)||(23390-23420)
[»] scaffold0151 (1 HSPs)
scaffold0151 (716-746)||(12215-12245)
[»] scaffold1948 (1 HSPs)
scaffold1948 (717-746)||(238-267)
[»] scaffold1260 (1 HSPs)
scaffold1260 (717-746)||(2088-2117)
[»] scaffold0607 (1 HSPs)
scaffold0607 (717-746)||(7729-7758)
[»] scaffold0414 (1 HSPs)
scaffold0414 (717-746)||(6405-6434)
[»] scaffold0315 (1 HSPs)
scaffold0315 (717-746)||(18723-18752)
[»] scaffold0207 (1 HSPs)
scaffold0207 (717-746)||(21454-21483)
[»] scaffold0056 (1 HSPs)
scaffold0056 (717-746)||(34080-34109)
[»] scaffold0011 (1 HSPs)
scaffold0011 (717-746)||(134662-134691)


Alignment Details
Target: chr2 (Bit Score: 694; Significance: 0; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 694; E-Value: 0
Query Start/End: Original strand, 1 - 845
Target Start/End: Complemental strand, 33242161 - 33241316
Alignment:
Q  1 tttctgttaactttcctatgctagaccaattaacaaaccaaaatgaggagttgccatcacccaatcagaaatcaaaaccatccctaagagcaaacctagc 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  33242161 tttctgttaactttcctatcccagaccaattaacaaaccaaaatgaggagttgtcatcacccaatcggaaatcaaaaccatccctaagagtaaacctagc 33242062  T
Q  101 tttcataatagcattccaagtggctgatcctgatttcctactaacagtgagaagcttggctgcatgaaaatacttgtgagttaaaacctgcacccataaa 200  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  33242061 tttcataatagcattccaagtgactgatcctgatttcctggtaacagtgagaagcttgtctgcatgaaaatacttgtgagttaaaaccttcacccataaa 33241962  T
Q  201 gaatcacaattttgatgtaacctccaaactaatctgcccagcagagatgtgttagcctctcttgccttcctgattccgagaccacctagctttttgggtt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  33241961 gaatcacaattttgatgtaacctccaaactaatctgcccagcagagatgtgttagcctctctagccttcctgatttcgagaccacctagctttttgggtt 33241862  T
Q  301 tggttattttctcccagccaaataagtagatcctaaaattggaagaacctttccactagaaatttattgccaatctatcaatagactcacaagttgattg 400  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33241861 tggttattttctcccagccaactaagtagatcctaaaattggaagaacctttccacaagaaatttattgccaatctatcaatagactcacaagttgattg 33241762  T
Q  401 gggcaaccaaaccccttgcatataataatagggaatagaatttaatacagatttaaccaaagtcattcgactagctttgtttaacaggtgatgtttccac 500  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  33241761 gggcaaccaagccacttgcatataataatagggaatagaatttaatacagatttaaccaaagtcattcgaccaactttgttcaacaggtgatgttgccac 33241662  T
Q  501 gaagctaaccgttggcttattttttcttc-aaaaaattcaaaatctctcctttggaggcgtccatgcatcatgggaaaacccgaatatttctcaagggaa 599  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  33241661 gaagctaaccgttggcttatgttttcctcaaaaaaattcaaaatctctcctttggaggcctccatgcatcatgggaaaacccaaatatttctcaagggaa 33241562  T
Q  600 agagtacagaggatacttgtagtcgtaacaatagatctcatttttgaaatattaagtttgcttatgatatattgtttgcattcacgtttttatccaatct 699  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  33241561 agagtacggaggatacttgtagtcgtaacaatagatctcatattttaaatattaagtttgcttctgatatattgtttgcaatcacgtttttatccactct 33241462  T
Q  700 tttctcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggttaatttaaaattgact 799  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  33241461 tttatcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtgcttaggctctgagtttactaagttaatttaaaattgact 33241362  T
Q  800 taggaacaatcttcttatctcttagcctccagatttaatgtgattt 845  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33241361 taggaacaatcttcttatctcttagcctctagatttaatgtgattt 33241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 694; E-Value: 0
Query Start/End: Original strand, 1 - 845
Target Start/End: Complemental strand, 33250082 - 33249237
Alignment:
Q  1 tttctgttaactttcctatgctagaccaattaacaaaccaaaatgaggagttgccatcacccaatcagaaatcaaaaccatccctaagagcaaacctagc 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  33250082 tttctgttaactttcctatcccagaccaattaacaaaccaaaatgaggagttgtcatcacccaatcggaaatcaaaaccatccctaagagtaaacctagc 33249983  T
Q  101 tttcataatagcattccaagtggctgatcctgatttcctactaacagtgagaagcttggctgcatgaaaatacttgtgagttaaaacctgcacccataaa 200  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  33249982 tttcataatagcattccaagtgactgatcctgatttcctggtaacagtgagaagcttgtctgcatgaaaatacttgtgagttaaaaccttcacccataaa 33249883  T
Q  201 gaatcacaattttgatgtaacctccaaactaatctgcccagcagagatgtgttagcctctcttgccttcctgattccgagaccacctagctttttgggtt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  33249882 gaatcacaattttgatgtaacctccaaactaatctgcccagcagagatgtgttagcctctctagccttcctgatttcgagaccacctagctttttgggtt 33249783  T
Q  301 tggttattttctcccagccaaataagtagatcctaaaattggaagaacctttccactagaaatttattgccaatctatcaatagactcacaagttgattg 400  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33249782 tggttattttctcccagccaactaagtagatcctaaaattggaagaacctttccacaagaaatttattgccaatctatcaatagactcacaagttgattg 33249683  T
Q  401 gggcaaccaaaccccttgcatataataatagggaatagaatttaatacagatttaaccaaagtcattcgactagctttgtttaacaggtgatgtttccac 500  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  33249682 gggcaaccaagccacttgcatataataatagggaatagaatttaatacagatttaaccaaagtcattcgaccaactttgttcaacaggtgatgttgccac 33249583  T
Q  501 gaagctaaccgttggcttattttttcttc-aaaaaattcaaaatctctcctttggaggcgtccatgcatcatgggaaaacccgaatatttctcaagggaa 599  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  33249582 gaagctaaccgttggcttatgttttcctcaaaaaaattcaaaatctctcctttggaggcctccatgcatcatgggaaaacccaaatatttctcaagggaa 33249483  T
Q  600 agagtacagaggatacttgtagtcgtaacaatagatctcatttttgaaatattaagtttgcttatgatatattgtttgcattcacgtttttatccaatct 699  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  33249482 agagtacggaggatacttgtagtcgtaacaatagatctcatattttaaatattaagtttgcttctgatatattgtttgcaatcacgtttttatccactct 33249383  T
Q  700 tttctcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggttaatttaaaattgact 799  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  33249382 tttatcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtgcttaggctctgagtttactaagttaatttaaaattgact 33249283  T
Q  800 taggaacaatcttcttatctcttagcctccagatttaatgtgattt 845  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33249282 taggaacaatcttcttatctcttagcctctagatttaatgtgattt 33249237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 687 - 846
Target Start/End: Original strand, 17564557 - 17564720
Alignment:
Q  687 ttttatccaatcttttctcactcttt--taattact--ttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactagg 782  Q
    |||||||||||||||||| |||||||  || ||| |  ||||| ||||||||||||||| ||||||||||| |||| | ||||||||| ||||||||| |    
T  17564557 ttttatccaatcttttcttactctttcatatttattatttttgatgatgacaaaagggg-agtaagacata-taagcatttaggctctcagtccactaag 17564654  T
Q  783 ttaat--ttaaaattgacttaggaacaatcttcttatctcttagcctccagatttaatgtgatttt 846  Q
    ||||   | ||| ||||||||| ||  | || ||||||||||||||||  ||||||||||||||||    
T  17564655 ttaaaaataaaatttgacttagaaatcaactacttatctcttagcctctggatttaatgtgatttt 17564720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 780
Target Start/End: Original strand, 22996298 - 22996358
Alignment:
Q  719 ctttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccacta 780  Q
    |||||| ||| |||||||||||||||||||||||| |||  | |||||||||||||||||||    
T  22996298 ctttttcttggtgacaaaagggggagtaagacatattaa-catttaggctctgagtccacta 22996358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 20416892 - 20416928
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20416892 ttttatttactttttgttgatgacaaaagggggagta 20416928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 21171672 - 21171708
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  21171672 ttttacttactttttgttgatgacaaaagggggagta 21171708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 22751413 - 22751449
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22751413 ttttatttactttttgttgatgacaaaagggggagta 22751449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 26868062 - 26868026
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  26868062 ttttatttactttttgttgatgacaaaagggggagta 26868026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 28731135 - 28731171
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  28731135 ttttacttactttttgttgatgacaaaagggggagta 28731171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Original strand, 19312212 - 19312243
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  19312212 tactttttgttgatgacaaaagggggagtaag 19312243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Complemental strand, 22764694 - 22764664
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  22764694 ttactttttgttgatgacaaaagggggagta 22764664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 22454257 - 22454286
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  22454257 tactttttgttgatgacaaaagggggagta 22454286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 6e-30; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 686 - 845
Target Start/End: Complemental strand, 9763515 - 9763358
Alignment:
Q  686 tttttatccaatcttttctcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggtta 785  Q
    ||||||||||||||||||| |||||||| | || |||||||||||||||||||| ||||||||||||||| || |   ||||||||||||||||| ||||    
T  9763515 tttttatccaatcttttcttactcttttcaataatttttgttgatgacaaaaggaggagtaagacataat-agcatccaggctctgagtccactaagtta 9763417  T
Q  786 a-tttaaaattgacttaggaacaatcttcttatctcttagcctccagatt-taatgtgattt 845  Q
    | |||||| ||||||||||||| ||||||   ||||||||||||  |||| |||||||||||    
T  9763416 actttaaacttgacttaggaaccatcttc---tctcttagcctctggattgtaatgtgattt 9763358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 686 - 814
Target Start/End: Complemental strand, 9804007 - 9803880
Alignment:
Q  686 tttttatccaatcttttctcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggtta 785  Q
    ||||||||||||||||||| |||||||| | || |||||||||||||| ||||| ||||||||||||||| || |   ||||||||||| ||||| ||||    
T  9804007 tttttatccaatcttttcttactcttttcaataatttttgttgatgac-aaaggaggagtaagacataat-agcatcaaggctctgagtacactaagtta 9803910  T
Q  786 atttaaaa-ttgacttaggaacaatcttct 814  Q
    | |||||| ||||||||||||| |||||||    
T  9803909 acttaaaacttgacttaggaaccatcttct 9803880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 804
Target Start/End: Original strand, 12597339 - 12597418
Alignment:
Q  729 atgacaaaagggggagtaagacat---aataag--tacttaggctctgagtccactaggttaatttaaaattgacttagga 804  Q
    ||||||||||||||||||||||||   |||||   || ||||||||||||||||||||||||| |||||||| ||||||||    
T  12597339 atgacaaaagggggagtaagacatgagaataataatatttaggctctgagtccactaggttaa-ttaaaatttacttagga 12597418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 9160737 - 9160701
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9160737 ttttacttactttttgttgatgacaaaagggggagta 9160701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 15887576 - 15887612
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15887576 ttttacttactttttgttgatgacaaaagggggagta 15887612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 18420157 - 18420121
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18420157 ttttatttactttttgttgatgacaaaagggggagta 18420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 25214670 - 25214706
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25214670 ttttatttactttttgttgatgacaaaagggggagta 25214706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 332485 - 332456
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  332485 tactttttgttgatgacaaaagggggagta 332456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 9709188 - 9709217
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  9709188 tactttttgttgatgacaaaagggggagta 9709217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 21696185 - 21696156
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  21696185 tactttttgttgatgacaaaagggggagta 21696156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 22577344 - 22577373
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  22577344 tactttttgttgatgacaaaagggggagta 22577373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 687 - 793
Target Start/End: Complemental strand, 16743078 - 16742972
Alignment:
Q  687 ttttatccaatcttttctcactctttt--aattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggtt 784  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||| |||||||| |||||| ||  |||||||||||||||||||||||    
T  16743078 ttttatccaatcttttcttactcttttcaaatta-tttttgttgatgataaaagggagagtaagatataata-gtgtttaggctctgagtccactaggtt 16742981  T
Q  785 aatttaaaa 793  Q
    |||| ||||    
T  16742980 aattaaaaa 16742972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 772
Target Start/End: Original strand, 14171930 - 14172016
Alignment:
Q  685 gtttttatccaatcttttctcactctttt-aattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctga 772  Q
    ||||||||| |||||||||||||| |||| ||||| |||||||| ||||| |||| ||||||||||||||| ||||  |||||||||||    
T  14171930 gtttttatcaaatcttttctcacttttttcaatta-tttttgtttatgacgaaagcgggagtaagacataa-aagtgtttaggctctga 14172016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 12359078 - 12359042
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  12359078 ttttacttactttttgttgatgacaaaagggggagta 12359042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 13914022 - 13913986
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13914022 ttttatttactttttgttgatgacaaaagggggagta 13913986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 20059741 - 20059777
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20059741 ttttacttactttttgttgatgacaaaagggggagta 20059777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 25734728 - 25734764
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25734728 ttttatttactttttgttgatgacaaaagggggagta 25734764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 25794846 - 25794810
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25794846 ttttacttactttttgttgatgacaaaagggggagta 25794810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Complemental strand, 17782080 - 17782049
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  17782080 tactttttgttgatgacaaaagggggagtaag 17782049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 21625938 - 21625908
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  21625938 tactttttgttgatgacaaaagggggagtaa 21625908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 747
Target Start/End: Complemental strand, 19483617 - 19483588
Alignment:
Q  718 actttttgttgatgacaaaagggggagtaa 747  Q
    ||||||||||||||||||||||||||||||    
T  19483617 actttttgttgatgacaaaagggggagtaa 19483588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 20112020 - 20112049
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  20112020 tactttttgttgatgacaaaagggggagta 20112049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 22802957 - 22802928
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  22802957 tactttttgttgatgacaaaagggggagta 22802928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 4e-19; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 687 - 785
Target Start/End: Original strand, 19642896 - 19642994
Alignment:
Q  687 ttttatccaatcttttctcactcttttaattactttttgttgatgacaaaagggggagtaag--acataataagtacttaggctctgagtccactaggtt 784  Q
    ||||||||||| |||||| |||||||| || | |||||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||| ||||    
T  19642896 ttttatccaatattttcttactctttttataa-tttttgttgatgacaaaagggggagtaagacacataat-agtatttaggctctgagtccactgggtt 19642993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 1054741 - 1054705
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1054741 ttttatttactttttgttgatgacaaaagggggagta 1054705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 1793714 - 1793750
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1793714 ttttatttactttttgttgatgacaaaagggggagta 1793750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 4405328 - 4405292
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4405328 ttttatttactttttgttgatgacaaaagggggagta 4405292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 9005687 - 9005723
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9005687 ttttatttactttttgttgatgacaaaagggggagta 9005723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 9390448 - 9390484
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9390448 ttttacttactttttgttgatgacaaaagggggagta 9390484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 14320878 - 14320914
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  14320878 ttttatttactttttgttgatgacaaaagggggagta 14320914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 15226140 - 15226176
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15226140 ttttatttactttttgttgatgacaaaagggggagta 15226176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 15661931 - 15661967
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15661931 ttttatttactttttgttgatgacaaaagggggagta 15661967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 16670351 - 16670387
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16670351 ttttatttactttttgttgatgacaaaagggggagta 16670387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 29905360 - 29905396
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29905360 ttttatttactttttgttgatgacaaaagggggagta 29905396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 29946526 - 29946562
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29946526 ttttatttactttttgttgatgacaaaagggggagta 29946562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 29995680 - 29995716
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29995680 ttttatttactttttgttgatgacaaaagggggagta 29995716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 746
Target Start/End: Original strand, 7803749 - 7803784
Alignment:
Q  711 tttaattactttttgttgatgacaaaagggggagta 746  Q
    |||| |||||||||||||||||||||||||||||||    
T  7803749 tttacttactttttgttgatgacaaaagggggagta 7803784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 746
Target Start/End: Original strand, 17909246 - 17909281
Alignment:
Q  711 tttaattactttttgttgatgacaaaagggggagta 746  Q
    |||| |||||||||||||||||||||||||||||||    
T  17909246 tttacttactttttgttgatgacaaaagggggagta 17909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Original strand, 11215913 - 11215943
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  11215913 ttactttttgttgatgacaaaagggggagta 11215943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 13120804 - 13120774
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  13120804 tactttttgttgatgacaaaagggggagtaa 13120774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Complemental strand, 14008424 - 14008394
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  14008424 ttactttttgttgatgacaaaagggggagta 14008394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 743
Target Start/End: Complemental strand, 14582245 - 14582212
Alignment:
Q  710 ttttaattactttttgttgatgacaaaaggggga 743  Q
    ||||| ||||||||||||||||||||||||||||    
T  14582245 ttttatttactttttgttgatgacaaaaggggga 14582212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 15834331 - 15834302
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  15834331 tactttttgttgatgacaaaagggggagta 15834302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 22141585 - 22141556
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  22141585 tactttttgttgatgacaaaagggggagta 22141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 687 - 845
Target Start/End: Original strand, 13306288 - 13306442
Alignment:
Q  687 ttttatccaatcttttctcactcttttaattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggttaa 786  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||| |||| |||||||||||||| ||||||| |||||   |||||||||||  |  |    
T  13306288 ttttatccaatcttttcttactcttttcatta-tttttgttgatgagaaaa-ggggagtaagacat-ataagtatttagg--ttgagtccactaaataca 13306382  T
Q  787 tttaaaa-ttgacttaggaacaatcttcttatctcttagcctccagatttaatgtgattt 845  Q
    ||||||| || |||||||||  | ||||||| |||||||| |   |||||||||||||||    
T  13306383 tttaaaatttaacttaggaatcaacttcttacctcttagcttatggatttaatgtgattt 13306442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 685 - 843
Target Start/End: Original strand, 10327670 - 10327835
Alignment:
Q  685 gtttttatccaatcttttctcactctttt-----aattactttttgttgatgacaaaagggggagtaagacataataa--gtacttaggctctgagtcca 777  Q
    |||||||||||||||||||| ||||||||     || |  ||||||||||||||||||||||||||||||||| ||||  | | |||||||||||||||     
T  10327670 gtttttatccaatcttttcttactctttttttataacttttttttgttgatgacaaaagggggagtaagacat-ataatggcatttaggctctgagtccg 10327768  T
Q  778 ctaggttaatttaaaattgacttagg--aacaatcttcttatctcttagcctccagatttaatgtgat 843  Q
    ||| |||||  ||||||| | |||||  |||  |||||| |||||||||||||  ||| |||||||||    
T  10327769 ctaagttaa-ataaaattaatttaggaaaaccttcttctcatctcttagcctctggatataatgtgat 10327835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 11516104 - 11516068
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11516104 ttttatttactttttgttgatgacaaaagggggagta 11516068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 15206618 - 15206654
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15206618 ttttatttactttttgttgatgacaaaagggggagta 15206654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 39520070 - 39520106
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39520070 ttttatttactttttgttgatgacaaaagggggagta 39520106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Original strand, 16818570 - 16818601
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  16818570 tactttttgttgatgacaaaagggggagtaag 16818601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Complemental strand, 10291572 - 10291542
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  10291572 ttactttttgttgatgacaaaagggggagta 10291542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Complemental strand, 11536916 - 11536886
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  11536916 ttactttttgttgatgacaaaagggggagta 11536886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 13575455 - 13575484
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  13575455 tactttttgttgatgacaaaagggggagta 13575484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 845
Target Start/End: Original strand, 24497432 - 24497591
Alignment:
Q  685 gtttttatccaatcttttctcactctttt-aattactttttgttgatgacaaaagggggagtaagacataataagtacttaggctctgagtccactaggt 783  Q
    |||||||| ||||||||||| ||| |||| ||||| ||||| | |||||||||||||| ||||| | ||| |||||| |||||||||||||||  || ||    
T  24497432 gtttttattcaatcttttcttacttttttcaattattttttat-gatgacaaaagggg-agtaaaatata-taagtatttaggctctgagtcctataagt 24497528  T
Q  784 taatttaaaatt-gacttaggaacaatcttcttatctcttagcctccagatttaatgtgattt 845  Q
     ||||||||||| |||||| |||  | ||||| | ||||| |||||  | |||||||||||||    
T  24497529 aaatttaaaattggacttaagaatcaacttctcacctctttgcctcgggttttaatgtgattt 24497591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 18154786 - 18154750
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18154786 ttttatttactttttgttgatgacaaaagggggagta 18154750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 19225918 - 19225882
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19225918 ttttacttactttttgttgatgacaaaagggggagta 19225882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 19419385 - 19419349
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19419385 ttttacttactttttgttgatgacaaaagggggagta 19419349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 23371607 - 23371571
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  23371607 ttttacttactttttgttgatgacaaaagggggagta 23371571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 23468679 - 23468715
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  23468679 ttttacttactttttgttgatgacaaaagggggagta 23468715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 30324547 - 30324583
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  30324547 ttttacttactttttgttgatgacaaaagggggagta 30324583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Complemental strand, 23784372 - 23784341
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  23784372 tactttttgttgatgacaaaagggggagtaag 23784341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 3597681 - 3597710
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  3597681 tactttttgttgatgacaaaagggggagta 3597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 747
Target Start/End: Original strand, 52786 - 52823
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagtaa 747  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  52786 ttttacttactttttgttgatgacaaaagggggagtaa 52823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 747
Target Start/End: Original strand, 153536 - 153573
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagtaa 747  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  153536 ttttacttactttttgttgatgacaaaagggggagtaa 153573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 7680193 - 7680157
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7680193 ttttacttactttttgttgatgacaaaagggggagta 7680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Original strand, 20883110 - 20883140
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  20883110 tactttttgttgatgacaaaagggggagtaa 20883140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 22643745 - 22643715
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  22643745 tactttttgttgatgacaaaagggggagtaa 22643715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 23067796 - 23067766
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  23067796 tactttttgttgatgacaaaagggggagtaa 23067766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 20953698 - 20953727
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  20953698 tactttttgttgatgacaaaagggggagta 20953727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 36134964 - 36134935
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  36134964 tactttttgttgatgacaaaagggggagta 36134935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 3168 - 3204
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3168 ttttacttactttttgttgatgacaaaagggggagta 3204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 3076 - 3040
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3076 ttttatttactttttgttgatgacaaaagggggagta 3040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 3190 - 3226
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3190 ttttatttactttttgttgatgacaaaagggggagta 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 2368 - 2404
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  2368 ttttatttactttttgttgatgacaaaagggggagta 2404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 6399 - 6435
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6399 ttttatttactttttgttgatgacaaaagggggagta 6435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 7581 - 7545
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7581 ttttatttactttttgttgatgacaaaagggggagta 7545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 12524 - 12560
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  12524 ttttatttactttttgttgatgacaaaagggggagta 12560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 30790 - 30754
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  30790 ttttatttactttttgttgatgacaaaagggggagta 30754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 70628 - 70592
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  70628 ttttatttactttttgttgatgacaaaagggggagta 70592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 176363 - 176327
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  176363 ttttagttactttttgttgatgacaaaagggggagta 176327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 718 - 748
Target Start/End: Original strand, 53103 - 53133
Alignment:
Q  718 actttttgttgatgacaaaagggggagtaag 748  Q
    |||||||||||||||||||||||||||||||    
T  53103 actttttgttgatgacaaaagggggagtaag 53133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 192958 - 192922
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  192958 ttttacttactttttgttgatgacaaaagggggagta 192922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 211569 - 211533
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  211569 ttttatttactttttgttgatgacaaaagggggagta 211533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 217438 - 217402
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  217438 ttttatttactttttgttgatgacaaaagggggagta 217402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 21033 - 20997
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  21033 ttttatttactttttgttgatgacaaaagggggagta 20997  T

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Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 128672 - 128636
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  128672 ttttatttactttttgttgatgacaaaagggggagta 128636  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000005; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 1110085 - 1110049
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1110085 ttttacttactttttgttgatgacaaaagggggagta 1110049  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 20561647 - 20561683
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20561647 ttttacttactttttgttgatgacaaaagggggagta 20561683  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 20797030 - 20797066
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20797030 ttttacttactttttgttgatgacaaaagggggagta 20797066  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Complemental strand, 21415161 - 21415125
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  21415161 ttttatttactttttgttgatgacaaaagggggagta 21415125  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 23405778 - 23405814
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  23405778 ttttacttactttttgttgatgacaaaagggggagta 23405814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 746
Target Start/End: Original strand, 34061925 - 34061961
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggagta 746  Q
    ||||| |||||||||||||||||||||||||||||||    
T  34061925 ttttatttactttttgttgatgacaaaagggggagta 34061961  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 746
Target Start/End: Complemental strand, 24927079 - 24927044
Alignment:
Q  711 tttaattactttttgttgatgacaaaagggggagta 746  Q
    |||| |||||||||||||||||||||||||||||||    
T  24927079 tttacttactttttgttgatgacaaaagggggagta 24927044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 13524033 - 13524003
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  13524033 tactttttgttgatgacaaaagggggagtaa 13524003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 744
Target Start/End: Original strand, 19477287 - 19477321
Alignment:
Q  710 ttttaattactttttgttgatgacaaaagggggag 744  Q
    ||||| |||||||||||||||||||||||||||||    
T  19477287 ttttacttactttttgttgatgacaaaagggggag 19477321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Original strand, 21519412 - 21519442
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  21519412 ttactttttgttgatgacaaaagggggagta 21519442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 23479208 - 23479178
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  23479208 tactttttgttgatgacaaaagggggagtaa 23479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 30743845 - 30743816
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  30743845 tactttttgttgatgacaaaagggggagta 30743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Complemental strand, 1727 - 1696
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  1727 tactttttgttgatgacaaaagggggagtaag 1696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Complemental strand, 10154 - 10123
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  10154 tactttttgttgatgacaaaagggggagtaag 10123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Complemental strand, 151 - 120
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  151 tactttttgttgatgacaaaagggggagtaag 120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 748
Target Start/End: Complemental strand, 59314 - 59283
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaag 748  Q
    ||||||||||||||||||||||||||||||||    
T  59314 tactttttgttgatgacaaaagggggagtaag 59283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 747
Target Start/End: Complemental strand, 2861 - 2831
Alignment:
Q  717 tactttttgttgatgacaaaagggggagtaa 747  Q
    |||||||||||||||||||||||||||||||    
T  2861 tactttttgttgatgacaaaagggggagtaa 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Original strand, 23390 - 23420
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  23390 ttactttttgttgatgacaaaagggggagta 23420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 746
Target Start/End: Complemental strand, 12245 - 12215
Alignment:
Q  716 ttactttttgttgatgacaaaagggggagta 746  Q
    |||||||||||||||||||||||||||||||    
T  12245 ttactttttgttgatgacaaaagggggagta 12215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1948 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1948
Description:

Target: scaffold1948; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 267 - 238
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  267 tactttttgttgatgacaaaagggggagta 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1260 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1260
Description:

Target: scaffold1260; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 2088 - 2117
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  2088 tactttttgttgatgacaaaagggggagta 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 7758 - 7729
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  7758 tactttttgttgatgacaaaagggggagta 7729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 6405 - 6434
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  6405 tactttttgttgatgacaaaagggggagta 6434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 18752 - 18723
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  18752 tactttttgttgatgacaaaagggggagta 18723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 21483 - 21454
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  21483 tactttttgttgatgacaaaagggggagta 21454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 34080 - 34109
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  34080 tactttttgttgatgacaaaagggggagta 34109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Original strand, 134662 - 134691
Alignment:
Q  717 tactttttgttgatgacaaaagggggagta 746  Q
    ||||||||||||||||||||||||||||||    
T  134662 tactttttgttgatgacaaaagggggagta 134691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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