View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6986_low_28 (Length: 216)

Name: NF6986_low_28
Description: NF6986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6986_low_28
NF6986_low_28
[»] chr8 (51 HSPs)
chr8 (1-216)||(21399553-21399771)
chr8 (1-216)||(21794046-21794264)
chr8 (1-214)||(18834262-18834474)
chr8 (95-216)||(22610265-22610386)
chr8 (95-216)||(23884101-23884223)
chr8 (1-99)||(1485133-1485232)
chr8 (1-99)||(5852624-5852723)
chr8 (1-99)||(14408776-14408875)
chr8 (1-99)||(4541702-4541802)
chr8 (1-99)||(14824507-14824606)
chr8 (1-99)||(20045527-20045626)
chr8 (1-99)||(23914715-23914814)
chr8 (1-101)||(45289877-45289978)
chr8 (1-99)||(4484011-4484110)
chr8 (110-214)||(18816295-18816401)
chr8 (143-216)||(22345145-22345218)
chr8 (143-216)||(22356805-22356878)
chr8 (1-101)||(24485370-24485471)
chr8 (1-99)||(4380954-4381052)
chr8 (110-214)||(21514637-21514743)
chr8 (1-96)||(18816643-18816739)
chr8 (1-99)||(18677394-18677493)
chr8 (1-95)||(22258469-22258564)
chr8 (1-101)||(22002486-22002587)
chr8 (114-215)||(36732411-36732514)
chr8 (151-216)||(22208258-22208323)
chr8 (110-215)||(4380616-4380723)
chr8 (149-210)||(22483773-22483834)
chr8 (151-214)||(22258306-22258369)
chr8 (95-216)||(36305936-36306051)
chr8 (111-215)||(12577826-12577932)
chr8 (106-216)||(21676591-21676701)
chr8 (1-101)||(22474549-22474650)
chr8 (102-216)||(21678844-21678958)
chr8 (148-216)||(22483924-22483991)
chr8 (149-203)||(18023567-18023621)
chr8 (2-103)||(23883741-23883843)
chr8 (149-203)||(38184923-38184977)
chr8 (1-101)||(17978574-17978675)
chr8 (1-101)||(22208061-22208162)
chr8 (1-101)||(38989246-38989347)
chr8 (1-101)||(39020343-39020444)
chr8 (1-65)||(6101949-6102013)
chr8 (176-216)||(21676498-21676537)
chr8 (144-215)||(17906848-17906919)
chr8 (95-149)||(36732549-36732604)
chr8 (166-216)||(22532130-22532180)
chr8 (166-216)||(22536815-22536865)
chr8 (1-65)||(5082408-5082472)
chr8 (184-216)||(20022038-20022070)
chr8 (1-65)||(24907675-24907738)
[»] chr7 (73 HSPs)
chr7 (1-216)||(58411-58627)
chr7 (1-214)||(15720614-15720831)
chr7 (95-216)||(13744508-13744629)
chr7 (95-216)||(8930763-8930887)
chr7 (98-216)||(36300639-36300757)
chr7 (95-216)||(33556103-33556225)
chr7 (97-216)||(15700733-15700852)
chr7 (95-214)||(25943199-25943319)
chr7 (95-216)||(18570577-18570701)
chr7 (1-99)||(15376045-15376144)
chr7 (1-99)||(20384455-20384554)
chr7 (1-99)||(457053-457153)
chr7 (1-99)||(4691056-4691155)
chr7 (129-216)||(13315080-13315167)
chr7 (1-99)||(13870077-13870176)
chr7 (1-99)||(16410791-16410890)
chr7 (1-99)||(16580452-16580551)
chr7 (1-99)||(27217593-27217692)
chr7 (1-101)||(32126222-32126323)
chr7 (1-95)||(14161020-14161115)
chr7 (1-99)||(18628297-18628396)
chr7 (1-99)||(18641003-18641102)
chr7 (1-99)||(20484811-20484910)
chr7 (2-99)||(18431445-18431543)
chr7 (110-216)||(15575647-15575755)
chr7 (106-216)||(47095394-47095506)
chr7 (1-99)||(16233253-16233352)
chr7 (1-99)||(16460153-16460252)
chr7 (1-99)||(45846986-45847085)
chr7 (110-215)||(48212726-48212835)
chr7 (1-101)||(41523651-41523752)
chr7 (1-101)||(41526113-41526214)
chr7 (1-96)||(15575997-15576093)
chr7 (110-216)||(18874663-18874770)
chr7 (114-216)||(19195562-19195665)
chr7 (1-99)||(20488172-20488271)
chr7 (1-99)||(26355311-26355410)
chr7 (1-99)||(26357763-26357862)
chr7 (110-215)||(43745602-43745709)
chr7 (114-216)||(708427-708531)
chr7 (2-101)||(14948449-14948549)
chr7 (114-216)||(20252180-20252284)
chr7 (18-96)||(43745221-43745300)
chr7 (1-99)||(18875009-18875106)
chr7 (1-101)||(24702963-24703064)
chr7 (1-101)||(24705410-24705511)
chr7 (151-215)||(8488093-8488157)
chr7 (151-215)||(8513752-8513816)
chr7 (1-99)||(11392632-11392729)
chr7 (152-216)||(38299738-38299802)
chr7 (1-101)||(8513913-8514014)
chr7 (149-210)||(15700887-15700948)
chr7 (149-216)||(16250220-16250287)
chr7 (1-101)||(14317865-14317966)
chr7 (161-214)||(43276744-43276797)
chr7 (161-216)||(3287743-3287798)
chr7 (110-215)||(4690662-4690769)
chr7 (1-79)||(3192393-3192471)
chr7 (19-103)||(8931145-8931230)
chr7 (1-101)||(9743237-9743338)
chr7 (148-214)||(19283040-19283108)
chr7 (1-103)||(33556445-33556548)
chr7 (1-99)||(48213107-48213206)
chr7 (144-216)||(12127161-12127233)
chr7 (1-96)||(13315446-13315542)
chr7 (1-95)||(34958014-34958109)
chr7 (149-203)||(831861-831915)
chr7 (149-203)||(1197041-1197095)
chr7 (110-138)||(16186859-16186887)
chr7 (144-216)||(20214129-20214201)
chr7 (184-216)||(20586374-20586406)
chr7 (1-65)||(32433785-32433849)
chr7 (184-216)||(48807323-48807355)
[»] chr3 (67 HSPs)
chr3 (4-216)||(14442013-14442229)
chr3 (5-214)||(17684835-17685048)
chr3 (1-214)||(54875474-54875692)
chr3 (1-216)||(6159240-6159459)
chr3 (5-214)||(17669698-17669911)
chr3 (1-216)||(2841504-2841723)
chr3 (1-216)||(6156546-6156764)
chr3 (109-216)||(3527155-3527262)
chr3 (110-215)||(24548953-24549057)
chr3 (1-99)||(6468466-6468565)
chr3 (1-99)||(17463909-17464008)
chr3 (1-99)||(34160057-34160156)
chr3 (1-99)||(45577773-45577872)
chr3 (1-101)||(13151118-13151219)
chr3 (1-101)||(13153586-13153687)
chr3 (106-202)||(50755266-50755365)
chr3 (1-99)||(10541619-10541718)
chr3 (1-99)||(15413162-15413261)
chr3 (1-99)||(17208132-17208231)
chr3 (1-99)||(55477223-55477322)
chr3 (95-216)||(22841277-22841405)
chr3 (110-215)||(24547146-24547253)
chr3 (106-216)||(14520388-14520500)
chr3 (1-99)||(14520054-14520153)
chr3 (1-99)||(45606237-45606336)
chr3 (1-99)||(14671616-14671716)
chr3 (110-216)||(17208470-17208578)
chr3 (1-99)||(10247054-10247153)
chr3 (1-101)||(14508639-14508740)
chr3 (1-99)||(15978266-15978365)
chr3 (1-101)||(5215439-5215540)
chr3 (1-101)||(7780675-7780776)
chr3 (1-101)||(14152558-14152659)
chr3 (1-101)||(16453605-16453705)
chr3 (1-101)||(28847949-28848050)
chr3 (1-101)||(54330465-54330566)
chr3 (148-216)||(12917304-12917372)
chr3 (151-216)||(14641546-14641611)
chr3 (110-216)||(29907584-29907693)
chr3 (110-216)||(29948750-29948859)
chr3 (110-216)||(29997904-29998013)
chr3 (151-215)||(14152398-14152462)
chr3 (149-216)||(45803329-45803396)
chr3 (1-103)||(3527533-3527636)
chr3 (151-214)||(5215636-5215699)
chr3 (109-166)||(13522326-13522386)
chr3 (102-216)||(3160625-3160740)
chr3 (144-215)||(16050909-16050980)
chr3 (149-203)||(2247877-2247931)
chr3 (22-60)||(45471771-45471809)
chr3 (105-216)||(50350814-50350929)
chr3 (1-101)||(53646217-53646318)
chr3 (1-65)||(22306779-22306843)
chr3 (1-65)||(25104291-25104355)
chr3 (1-41)||(45471726-45471766)
chr3 (1-96)||(48043862-48043958)
chr3 (1-95)||(25201708-25201803)
chr3 (1-79)||(12917715-12917793)
chr3 (166-216)||(19568206-19568256)
chr3 (151-216)||(15566733-15566798)
chr3 (184-216)||(5200241-5200273)
chr3 (102-138)||(12155102-12155138)
chr3 (184-216)||(13185917-13185949)
chr3 (176-216)||(25202149-25202188)
chr3 (184-216)||(40808018-40808050)
chr3 (184-216)||(40812855-40812887)
chr3 (184-216)||(44274440-44274472)
[»] chr1 (37 HSPs)
chr1 (1-214)||(20588471-20588690)
chr1 (1-214)||(20593009-20593228)
chr1 (95-216)||(34392698-34392822)
chr1 (95-216)||(45499472-45499596)
chr1 (111-216)||(8306552-8306660)
chr1 (1-99)||(13989597-13989696)
chr1 (1-99)||(21474416-21474516)
chr1 (1-99)||(14237773-14237872)
chr1 (1-101)||(51083008-51083110)
chr1 (1-101)||(23593060-23593162)
chr1 (1-99)||(16362650-16362750)
chr1 (110-216)||(28476732-28476840)
chr1 (1-99)||(24719855-24719954)
chr1 (1-99)||(41373205-41373304)
chr1 (1-101)||(4596004-4596105)
chr1 (1-101)||(21922619-21922720)
chr1 (110-216)||(12710813-12710921)
chr1 (132-216)||(35895069-35895153)
chr1 (106-211)||(24719514-24719620)
chr1 (148-216)||(17901792-17901860)
chr1 (126-216)||(38056670-38056762)
chr1 (151-216)||(50544861-50544926)
chr1 (154-216)||(635002-635064)
chr1 (1-101)||(21841500-21841603)
chr1 (111-215)||(24007224-24007330)
chr1 (151-214)||(22145666-22145729)
chr1 (148-216)||(6834162-6834230)
chr1 (180-216)||(7703140-7703176)
chr1 (151-215)||(8275988-8276052)
chr1 (150-215)||(51336467-51336532)
chr1 (146-214)||(16401897-16401963)
chr1 (166-216)||(7051920-7051970)
chr1 (166-216)||(24723349-24723399)
chr1 (1-101)||(44892241-44892343)
chr1 (150-215)||(12327742-12327807)
chr1 (143-216)||(21168914-21168987)
chr1 (102-138)||(21188111-21188147)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-216)||(39942-40161)
[»] chr5 (35 HSPs)
chr5 (1-216)||(32607314-32607535)
chr5 (97-216)||(21398642-21398764)
chr5 (1-99)||(18744440-18744539)
chr5 (2-99)||(39245868-39245966)
chr5 (1-99)||(23199553-23199652)
chr5 (1-99)||(38620167-38620266)
chr5 (1-101)||(29346712-29346813)
chr5 (1-101)||(29349185-29349286)
chr5 (1-101)||(29351658-29351759)
chr5 (1-99)||(39364115-39364214)
chr5 (1-101)||(264098-264198)
chr5 (114-216)||(16063701-16063805)
chr5 (110-216)||(18744820-18744928)
chr5 (1-99)||(23065247-23065346)
chr5 (110-214)||(23199207-23199313)
chr5 (1-101)||(10732267-10732368)
chr5 (1-101)||(42244692-42244793)
chr5 (110-210)||(1627071-1627174)
chr5 (110-215)||(660736-660841)
chr5 (1-101)||(20909744-20909846)
chr5 (143-209)||(31621957-31622023)
chr5 (97-161)||(22111911-22111977)
chr5 (26-79)||(660287-660340)
chr5 (1-101)||(14025965-14026066)
chr5 (114-216)||(6551288-6551392)
chr5 (148-216)||(20313263-20313329)
chr5 (106-138)||(21504082-21504114)
chr5 (1-79)||(21503711-21503789)
chr5 (1-101)||(8504046-8504147)
chr5 (1-101)||(8833364-8833465)
chr5 (143-216)||(31622098-31622171)
chr5 (184-216)||(20469174-20469206)
chr5 (184-216)||(21300042-21300074)
chr5 (184-216)||(21617926-21617958)
chr5 (150-214)||(36508633-36508697)
[»] chr4 (49 HSPs)
chr4 (1-216)||(55583031-55583250)
chr4 (95-216)||(9622419-9622543)
chr4 (129-216)||(10273350-10273437)
chr4 (1-99)||(7640518-7640617)
chr4 (1-99)||(15117684-15117783)
chr4 (1-99)||(18238944-18239043)
chr4 (1-101)||(3485700-3485801)
chr4 (1-101)||(12033101-12033202)
chr4 (1-101)||(25030996-25031097)
chr4 (1-99)||(2424782-2424881)
chr4 (1-99)||(19243434-19243533)
chr4 (1-99)||(44772415-44772514)
chr4 (110-216)||(14631081-14631189)
chr4 (110-216)||(25513797-25513905)
chr4 (1-99)||(18022844-18022944)
chr4 (1-99)||(1836850-1836949)
chr4 (5-101)||(14873415-14873512)
chr4 (1-101)||(29268087-29268188)
chr4 (1-101)||(50221668-50221768)
chr4 (2-101)||(44616023-44616123)
chr4 (110-215)||(26446153-26446260)
chr4 (1-101)||(14718042-14718143)
chr4 (2-71)||(26445677-26445746)
chr4 (123-216)||(16296897-16296992)
chr4 (111-170)||(16296819-16296881)
chr4 (151-214)||(12424290-12424355)
chr4 (161-215)||(13847200-13847254)
chr4 (151-216)||(9638999-9639064)
chr4 (114-208)||(35660906-35661002)
chr4 (151-214)||(33186892-33186955)
chr4 (111-215)||(2424386-2424492)
chr4 (151-216)||(15239814-15239879)
chr4 (1-101)||(19566076-19566177)
chr4 (1-101)||(33186695-33186796)
chr4 (1-101)||(44023761-44023862)
chr4 (1-101)||(12424451-12424552)
chr4 (1-79)||(10273195-10273273)
chr4 (149-203)||(17143009-17143063)
chr4 (166-216)||(19434557-19434607)
chr4 (1-101)||(11478768-11478869)
chr4 (105-138)||(14477573-14477606)
chr4 (49-101)||(25513583-25513636)
chr4 (1-101)||(33243452-33243553)
chr4 (105-142)||(45314157-45314194)
chr4 (49-101)||(46741040-46741093)
chr4 (1-65)||(11425737-11425801)
chr4 (184-216)||(15115244-15115276)
chr4 (144-216)||(37019652-37019724)
chr4 (1-65)||(42875589-42875653)
[»] chr6 (36 HSPs)
chr6 (95-216)||(10446147-10446271)
chr6 (1-99)||(18333924-18334023)
chr6 (1-99)||(19858254-19858353)
chr6 (1-99)||(24423278-24423377)
chr6 (1-99)||(26923777-26923876)
chr6 (1-99)||(33865009-33865108)
chr6 (1-99)||(2290510-2290610)
chr6 (1-99)||(22782959-22783058)
chr6 (1-101)||(1540241-1540342)
chr6 (1-101)||(21686329-21686430)
chr6 (1-101)||(12743051-12743152)
chr6 (1-101)||(17882825-17882926)
chr6 (1-101)||(23656132-23656233)
chr6 (1-99)||(8055762-8055861)
chr6 (1-101)||(17318281-17318382)
chr6 (1-101)||(33862528-33862629)
chr6 (119-215)||(21683074-21683171)
chr6 (148-216)||(29045257-29045325)
chr6 (151-216)||(23658078-23658143)
chr6 (126-216)||(19825484-19825576)
chr6 (95-138)||(1818884-1818927)
chr6 (110-215)||(15998835-15998942)
chr6 (110-214)||(20410512-20410616)
chr6 (1-79)||(17856773-17856851)
chr6 (151-216)||(18982561-18982626)
chr6 (37-99)||(2077072-2077135)
chr6 (116-216)||(34140454-34140554)
chr6 (1-101)||(18928517-18928618)
chr6 (1-101)||(22557041-22557142)
chr6 (144-216)||(15890710-15890782)
chr6 (176-216)||(34153070-34153109)
chr6 (19-101)||(31734518-31734601)
chr6 (18-103)||(10445807-10445893)
chr6 (1-101)||(18455231-18455332)
chr6 (105-142)||(25601401-25601438)
chr6 (1-65)||(23150483-23150547)
[»] chr2 (48 HSPs)
chr2 (95-216)||(28344986-28345107)
chr2 (1-99)||(18809674-18809773)
chr2 (1-99)||(23711345-23711444)
chr2 (1-99)||(26506110-26506209)
chr2 (1-99)||(27920096-27920195)
chr2 (143-216)||(23801477-23801550)
chr2 (1-101)||(38968211-38968312)
chr2 (1-99)||(39683046-39683146)
chr2 (111-216)||(149499-149610)
chr2 (1-99)||(21315823-21315922)
chr2 (1-99)||(21368900-21368999)
chr2 (1-99)||(23131593-23131692)
chr2 (1-99)||(23134060-23134159)
chr2 (1-99)||(26508588-26508687)
chr2 (1-99)||(32038829-32038928)
chr2 (1-101)||(24897525-24897626)
chr2 (1-101)||(24904962-24905063)
chr2 (1-99)||(34401854-34401953)
chr2 (1-101)||(572129-572230)
chr2 (1-101)||(24900008-24900109)
chr2 (1-101)||(24902485-24902586)
chr2 (1-101)||(24907437-24907538)
chr2 (110-216)||(21335264-21335372)
chr2 (1-99)||(9785374-9785473)
chr2 (1-99)||(21335613-21335712)
chr2 (116-216)||(21315474-21315576)
chr2 (1-101)||(23136299-23136400)
chr2 (110-216)||(21369239-21369347)
chr2 (1-99)||(22690471-22690569)
chr2 (1-99)||(22695067-22695165)
chr2 (110-215)||(23610572-23610679)
chr2 (1-79)||(22686682-22686760)
chr2 (1-87)||(23610267-23610354)
chr2 (1-96)||(28577830-28577932)
chr2 (95-164)||(25584161-25584233)
chr2 (95-215)||(34491239-34491364)
chr2 (105-142)||(28652626-28652663)
chr2 (144-216)||(24516168-24516240)
chr2 (148-216)||(36734449-36734515)
chr2 (144-214)||(2523747-2523817)
chr2 (166-215)||(357885-357934)
chr2 (184-216)||(3539859-3539891)
chr2 (184-216)||(17307508-17307540)
chr2 (184-216)||(22501993-22502025)
chr2 (184-216)||(22509927-22509959)
chr2 (184-216)||(25142226-25142258)
chr2 (184-216)||(27852690-27852722)
chr2 (1-65)||(29114222-29114286)
[»] scaffold0031 (2 HSPs)
scaffold0031 (95-216)||(127341-127465)
scaffold0031 (1-103)||(127722-127825)
[»] scaffold0174 (3 HSPs)
scaffold0174 (97-216)||(19789-19910)
scaffold0174 (153-216)||(5445-5508)
scaffold0174 (149-214)||(11603-11668)
[»] scaffold0379 (1 HSPs)
scaffold0379 (97-214)||(10881-10999)
[»] scaffold0004 (4 HSPs)
scaffold0004 (95-216)||(75867-75991)
scaffold0004 (95-214)||(73017-73139)
scaffold0004 (149-216)||(111347-111414)
scaffold0004 (148-216)||(66070-66138)
[»] scaffold0414 (2 HSPs)
scaffold0414 (110-214)||(11160-11267)
scaffold0414 (1-99)||(11508-11607)
[»] scaffold0555 (1 HSPs)
scaffold0555 (109-216)||(8744-8854)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-99)||(38553-38652)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-99)||(95142-95241)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-101)||(14125-14226)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-101)||(5438-5539)
scaffold0109 (1-101)||(135-236)
[»] scaffold0878 (2 HSPs)
scaffold0878 (110-216)||(3420-3528)
scaffold0878 (1-79)||(3927-4005)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-99)||(62198-62297)
scaffold0032 (110-216)||(61846-61957)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-99)||(12021-12120)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-101)||(7768-7869)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-101)||(21482-21583)
[»] scaffold1186 (1 HSPs)
scaffold1186 (110-216)||(1966-2074)
[»] scaffold0005 (1 HSPs)
scaffold0005 (110-216)||(186194-186302)
[»] scaffold0730 (1 HSPs)
scaffold0730 (129-216)||(6503-6590)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-99)||(18287-18386)
scaffold0203 (110-216)||(17938-18046)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-99)||(22820-22919)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-99)||(39070-39169)
scaffold0063 (28-101)||(62538-62612)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-101)||(41131-41232)
[»] scaffold0369 (2 HSPs)
scaffold0369 (110-216)||(15614-15721)
scaffold0369 (1-79)||(16120-16198)
[»] scaffold0232 (1 HSPs)
scaffold0232 (4-99)||(4064-4160)
[»] scaffold0695 (1 HSPs)
scaffold0695 (1-99)||(6676-6775)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-99)||(13151-13250)
[»] scaffold0630 (1 HSPs)
scaffold0630 (4-101)||(8859-8957)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-101)||(14681-14782)
[»] scaffold0048 (1 HSPs)
scaffold0048 (143-216)||(68724-68797)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-101)||(134944-135045)
scaffold0028 (1-101)||(137413-137514)
scaffold0028 (1-101)||(139882-139983)
scaffold0028 (1-101)||(142351-142452)
scaffold0028 (1-101)||(144820-144921)
[»] scaffold0676 (2 HSPs)
scaffold0676 (114-216)||(2831-2935)
scaffold0676 (111-170)||(2762-2824)
[»] scaffold0056 (1 HSPs)
scaffold0056 (110-215)||(18221-18328)
[»] scaffold0247 (1 HSPs)
scaffold0247 (95-214)||(1008-1128)
[»] scaffold0108 (3 HSPs)
scaffold0108 (1-101)||(6209-6310)
scaffold0108 (1-57)||(6987-7043)
scaffold0108 (152-216)||(6408-6472)
[»] scaffold0231 (2 HSPs)
scaffold0231 (110-216)||(17519-17627)
scaffold0231 (14-79)||(11811-11876)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-99)||(5488-5586)
[»] scaffold0853 (1 HSPs)
scaffold0853 (110-214)||(2454-2562)
[»] scaffold0516 (2 HSPs)
scaffold0516 (1-77)||(7804-7880)
scaffold0516 (110-215)||(5304-5411)
[»] scaffold0148 (1 HSPs)
scaffold0148 (114-216)||(8792-8898)
[»] scaffold0086 (1 HSPs)
scaffold0086 (148-216)||(35184-35252)
[»] scaffold0594 (1 HSPs)
scaffold0594 (149-216)||(2234-2301)
[»] scaffold0439 (2 HSPs)
scaffold0439 (95-184)||(12241-12333)
scaffold0439 (2-91)||(4215-4305)
[»] scaffold0505 (1 HSPs)
scaffold0505 (105-214)||(4877-4988)
[»] scaffold0220 (1 HSPs)
scaffold0220 (151-216)||(13938-14003)
[»] scaffold0061 (2 HSPs)
scaffold0061 (114-216)||(14584-14689)
scaffold0061 (114-216)||(23642-23747)
[»] scaffold0139 (2 HSPs)
scaffold0139 (155-215)||(23527-23587)
scaffold0139 (111-216)||(40159-40268)
[»] scaffold0431 (2 HSPs)
scaffold0431 (151-214)||(5620-5685)
scaffold0431 (1-101)||(5423-5524)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-101)||(312-415)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-101)||(9975-10078)
[»] scaffold0162 (3 HSPs)
scaffold0162 (2-99)||(24227-24322)
scaffold0162 (110-139)||(23959-23988)
scaffold0162 (181-213)||(23893-23925)
[»] scaffold0017 (1 HSPs)
scaffold0017 (105-216)||(26668-26781)
[»] scaffold0007 (2 HSPs)
scaffold0007 (110-216)||(16417-16526)
scaffold0007 (161-216)||(18699-18754)
[»] scaffold0461 (1 HSPs)
scaffold0461 (95-142)||(12417-12464)
[»] scaffold0328 (1 HSPs)
scaffold0328 (173-216)||(18638-18681)
[»] scaffold0213 (1 HSPs)
scaffold0213 (111-216)||(19154-19261)
[»] scaffold1160 (1 HSPs)
scaffold1160 (1-101)||(477-578)
[»] scaffold0371 (1 HSPs)
scaffold0371 (1-101)||(10604-10705)
[»] scaffold0035 (2 HSPs)
scaffold0035 (148-216)||(43785-43851)
scaffold0035 (176-216)||(39093-39132)
[»] scaffold0285 (1 HSPs)
scaffold0285 (1-95)||(19352-19447)
[»] scaffold0298 (1 HSPs)
scaffold0298 (149-203)||(372-426)
[»] scaffold0149 (1 HSPs)
scaffold0149 (167-216)||(21616-21665)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-101)||(10086-10187)
[»] scaffold1941 (1 HSPs)
scaffold1941 (144-216)||(120-192)
[»] scaffold0205 (1 HSPs)
scaffold0205 (176-216)||(5614-5653)
[»] scaffold0104 (2 HSPs)
scaffold0104 (101-149)||(14892-14940)
scaffold0104 (101-149)||(16912-16960)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-216)||(96380-96452)
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-91)||(8614-8705)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-40)||(21444-21483)
[»] scaffold0468 (1 HSPs)
scaffold0468 (2-79)||(11270-11347)
[»] scaffold0112 (1 HSPs)
scaffold0112 (143-216)||(2870-2943)
[»] scaffold1256 (1 HSPs)
scaffold1256 (151-215)||(2199-2263)
[»] scaffold0802 (1 HSPs)
scaffold0802 (184-216)||(4707-4739)
[»] scaffold0407 (1 HSPs)
scaffold0407 (1-65)||(11470-11534)
[»] scaffold0337 (1 HSPs)
scaffold0337 (102-138)||(3143-3179)
[»] scaffold0207 (1 HSPs)
scaffold0207 (184-216)||(13390-13422)
[»] scaffold0058 (1 HSPs)
scaffold0058 (102-216)||(59654-59769)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-65)||(146524-146588)


Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 21399553 - 21399771
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaat 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21399553 caaatttgattcaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaat 21399652  T
Q  101 tttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 197  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21399653 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 21399752  T
Q  198 gtcccacccttaccttaga 216  Q
    |||||||||||||||||||    
T  21399753 gtcccacccttaccttaga 21399771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 21794046 - 21794264
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaat 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21794046 caaatttgattcaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaat 21794145  T
Q  101 tttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 197  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21794146 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 21794245  T
Q  198 gtcccacccttaccttaga 216  Q
    |||||||||||||||||||    
T  21794246 gtcccacccttaccttaga 21794264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 18834262 - 18834474
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaat 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |  |||||||||||||||||    
T  18834262 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaaccaaaatattatttagaaaatcatcaat 18834361  T
Q  101 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18834362 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccc-ttttagaatcatacaatccattattagagaaagctagtc 18834460  T
Q  201 ccacccttacctta 214  Q
    ||||||||||||||    
T  18834461 ccacccttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 22610386 - 22610265
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 194  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22610386 atcaattttacaaattaaccataatttctataacatcaaaactaacaaaataacatgttaaacccctttttagaatcatacaactcattattagagaaag 22610287  T
Q  195 ctagtcccacccttaccttaga 216  Q
     |||||||||||||||||||||    
T  22610286 ttagtcccacccttaccttaga 22610265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 23884101 - 23884223
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23884101 atcaattgtgtaatttaaccctaatttctataacatcaaaactaacaaaagaacaacatgttaaacccctttttagaatcatacaacccat--ttagaga 23884198  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||    
T  23884199 aagctagtcccgcccttaccttaga 23884223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1485133 - 1485232
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  1485133 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 1485232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5852723 - 5852624
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  5852723 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 5852624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14408875 - 14408776
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14408875 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14408776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4541802 - 4541702
Alignment:
Q  1 caaatttgatcc-aaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  4541802 caaatttgatcccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatca 4541703  T
Q  99 a 99  Q
    |    
T  4541702 a 4541702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14824507 - 14824606
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14824507 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14824606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20045626 - 20045527
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  20045626 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 20045527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23914715 - 23914814
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23914715 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 23914814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45289978 - 45289877
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  45289978 caaatttgatctcaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 45289879  T
Q  100 tt 101  Q
    ||    
T  45289878 tt 45289877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4484011 - 4484110
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4484011 caaatttgatctcaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 4484110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 18816401 - 18816295
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||    
T  18816401 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccaccct 18816302  T
Q  208 tacctta 214  Q
    |||||||    
T  18816301 tacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 22345145 - 22345218
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22345145 aacaacatgttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttaga 22345218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 22356805 - 22356878
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22356805 aacaacatgttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttaga 22356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24485471 - 24485370
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  24485471 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 24485372  T
Q  100 tt 101  Q
    ||    
T  24485371 tt 24485370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4381052 - 4380954
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||| ||||    
T  4381052 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaa-agactcaaaaccatataaaacttgacccaaaacattattttagaaaatcgtcaa 4380954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 21514637 - 21514743
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||| |||||||||||||| |||||||||||||    
T  21514637 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccaccct 21514736  T
Q  208 tacctta 214  Q
    |||||||    
T  21514737 tacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18816739 - 18816643
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 96  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||| |||| ||||||||    
T  18816739 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaacatataaaacttgacccaaaacattagtttacaaaatcat 18816643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18677493 - 18677394
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  18677493 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 18677394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22258564 - 22258469
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 95  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| ||||||||||||||||    
T  22258564 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgacccaaaacattattttagaaaatca 22258469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22002486 - 22002587
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||    
T  22002486 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaa 22002585  T
Q  100 tt 101  Q
    ||    
T  22002586 tt 22002587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 36732514 - 36732411
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 211  Q
    ||||||| ||||||||||||||||||||| ||| ||| | |||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  36732514 cctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttacc 36732415  T
Q  212 ttag 215  Q
    ||||    
T  36732414 ttag 36732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 22208258 - 22208323
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22208258 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaga 22208323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 4380723 - 4380616
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| ||||||||||||    
T  4380723 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccct 4380624  T
Q  208 taccttag 215  Q
    ||||||||    
T  4380623 taccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 22483773 - 22483834
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttac 210  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  22483773 atgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 22258369 - 22258306
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||| ||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  22258369 gttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 36305936 - 36306051
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 194  Q
    ||||| ||||||| |||||||||||||||||||||   |||| ||||| | | ||| ||||| || |||| ||||||||||||||  |||||||||||||    
T  36305936 atcaactttgcaaattaaccctaatttctataaca---aaac-aacaaca-accattttaaaacctttttcagaatcatacaaccg-ttattagagaaag 36306029  T
Q  195 ctagtcccacccttaccttaga 216  Q
    |||||| |||||||||||||||    
T  36306030 ctagtctcacccttaccttaga 36306051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 12577826 - 12577932
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaa-aacaacat--gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||| |||||||||||||||||||||| ||| | |   ||||||||| ||||  |||| |||||||  |||||||||||||| ||||||||||||    
T  12577826 aaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaact-attattagagaaagttagtcccaccct 12577924  T
Q  208 taccttag 215  Q
    ||||||||    
T  12577925 taccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 21676701 - 21676591
Alignment:
Q  106 aatttaaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||| |||||||||||||| |||||||||| ||| ||| |||  |||||||||  ||| | ||| ||| ||||||||||||||||| ||||||||||    
T  21676701 aatttaaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagagaa-gctagtccca 21676604  T
Q  204 cccttaccttaga 216  Q
    |||||||||||||    
T  21676603 cccttaccttaga 21676591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22474549 - 22474650
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  22474549 caaatttgattccaaaacttgtctaaccatttgtatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaa 22474648  T
Q  100 tt 101  Q
    ||    
T  22474649 tt 22474650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 21678958 - 21678844
Alignment:
Q  102 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagt 199  Q
    |||||||| || ||||||| |||||| |||||||||| ||| ||| |||  |||||||||  ||| | ||| ||| ||||||||||||||||| ||||||    
T  21678958 ttgcaattcaaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagagaa-gctagt 21678861  T
Q  200 cccacccttaccttaga 216  Q
    |||||||||||||||||    
T  21678860 cccacccttaccttaga 21678844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 22483924 - 22483991
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||| ||||| ||||||| ||||||||||||||| ||||||| | |||||||||||    
T  22483924 catgttaaaccctttttaagaattatacaactcattattagagaaagttagtccc-cgcttaccttaga 22483991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 18023621 - 18023567
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  18023621 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 18023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 23883741 - 23883843
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaat 100  Q
    ||||||||| | |||  |||||||||||||| || |||| |||||  |||||||| ||| |||| |||| || ||||| |||||||| ||||||||||||    
T  23883741 aaatttgattccaaaacttgtctaaacatttctaaacatgaaaaggcactcaaaatcatataaaacttggactaaaacattattttacaaaatcatcaat 23883840  T
Q  101 ttt 103  Q
    |||    
T  23883841 ttt 23883843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 38184977 - 38184923
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  38184977 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 38184923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17978675 - 17978574
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||  |||||||||||||||| |||    
T  17978675 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaatattattttagaaaatcaccaa 17978576  T
Q  100 tt 101  Q
    ||    
T  17978575 tt 17978574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22208061 - 22208162
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  22208061 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 22208160  T
Q  100 tt 101  Q
    ||    
T  22208161 tt 22208162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38989246 - 38989347
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||| |||||  |||||||| ||||| ||||||| |  ||  |||||||||||| |||| ||||| ||||||  |||||||||||| |||||||    
T  38989246 caaatttgattcaaaaacttgtctaaccatttctatacatgattaggcactcaaaaccatataaaacttgacccaaaatattattttagaaattcatcaa 38989345  T
Q  100 tt 101  Q
    ||    
T  38989346 tt 38989347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39020343 - 39020444
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||| |||||  |||||||| ||||| ||||||| |  ||  |||||||||||| |||| ||||| ||||||  |||||||||||| |||||||    
T  39020343 caaatttgattcaaaaacttgtctaaccatttctatacatgattaggcactcaaaaccatataaaacttgacccaaaatattattttagaaattcatcaa 39020442  T
Q  100 tt 101  Q
    ||    
T  39020443 tt 39020444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6102013 - 6101949
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||||||| |||||||||||||   |||| |||||||||||| ||||    
T  6102013 caaatttgatccaaaaacttgtctaaccatttatatacatgttaagacactcaaaaccatataaa 6101949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 21676537 - 21676498
Alignment:
Q  176 aacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  21676537 aacccattattagagaa-gctagtcccacccttaccttaga 21676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 17906919 - 17906848
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||| ||||||| ||  ||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  17906919 acaacttgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 17906848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 36732604 - 36732549
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataac-atcaaaactaacaaaacaaca 149  Q
    ||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||||||    
T  36732604 atcaattttgcaaattaaccctaatttcaataacaatctaaattaacaaaacaaca 36732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 22532180 - 22532130
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||    
T  22532180 agaatcatacaacttagaattagagaaagttagtcccacccttaccttaga 22532130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 22536865 - 22536815
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||    
T  22536865 agaatcatacaacttagaattagagaaagttagtcccacccttaccttaga 22536815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5082472 - 5082408
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  || ||||| |||||||||||||   |||| |||||||||||| ||||    
T  5082472 caaatttgatccaaaaacttatctaaccatttatatacatgttaagacactcaaaaccatataaa 5082408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 20022070 - 20022038
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  20022070 attagagaaagttagtcccacccttaccttaga 20022038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24907675 - 24907738
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||| |||||||||||| ||| || |||| |||||| ||||||| |||| ||||    
T  24907675 caaatttgatccaaa-gtttgtctaaacgtttctaaacatgaaaagacactcaaatccatataaa 24907738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 58627 - 58411
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||||    
T  58627 caaatttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaacaaaaacattattttagaaaatcatcaa 58528  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagt 199  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58527 ttttgcaatttaaccctaatttctttaacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagt 58428  T
Q  200 cccacccttaccttaga 216  Q
    |||||||||||||||||    
T  58427 cccacccttaccttaga 58411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 15720614 - 15720831
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  15720614 caaatttgatcccaaagtttgtctaaacatttatatatatcaaaagaggctcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaa 15720713  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagct 196  Q
    ||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15720714 ttttgcaatttaaccataatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattatgagagaaagct 15720813  T
Q  197 agtcccacccttacctta 214  Q
    ||||||||| ||||||||    
T  15720814 agtcccacctttacctta 15720831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 13744629 - 13744508
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 194  Q
    ||||| ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13744629 atcaactttgcaaattaaccctaatttctataacattaaaaataacaaaacaacatgttaaacccctttttagaatcataaaacccattattagagaaag 13744530  T
Q  195 ctagtcccacccttaccttaga 216  Q
    ||||||||||||||||||||||    
T  13744529 ctagtcccacccttaccttaga 13744508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 8930887 - 8930763
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  8930887 atcaattttgcaaattaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 8930788  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    ||  |||||||||||||||||||||    
T  8930787 aatgtagtcccacccttaccttaga 8930763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 36300757 - 36300639
Alignment:
Q  98 aattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 197  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36300757 aattttgcaatttaaccctaattcctatatcatcaaaactaacaaaataacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 36300658  T
Q  198 gtcccacccttaccttaga 216  Q
    ||| |||| ||||||||||    
T  36300657 gtctcacctttaccttaga 36300639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 33556225 - 33556103
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  33556225 atcaatttttcaatt-aaccctaatttctataacatcaaa-ctaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 33556128  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||| ||||||    
T  33556127 aagctagtcccacccttatcttaga 33556103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 15700852 - 15700733
Alignment:
Q  97 caattttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagc 195  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15700852 caattttgcaatt-aaccctaatttctataacattaaaactaacaacaactacatgttaaacccctttttagaaccatacaacccattattagagaaagc 15700754  T
Q  196 tagtcccacccttaccttaga 216  Q
    ||||  || ||||||||||||    
T  15700753 tagtatcatccttaccttaga 15700733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 25943199 - 25943319
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaac---atgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||   |||||||||||||||| | || |||||||||||||||||||||    
T  25943199 atcaattttgcaatt-aaccctaatttctataacatcaaaacta-caaaacaacgaaatgttaaaccccttttcaaaaacatacaacccattattagaga 25943296  T
Q  192 aagctagtcccacccttacctta 214  Q
    |||||||||||||||||||||||    
T  25943297 aagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 18570577 - 18570701
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||| | ||| |||||| ||| ||||||||||||||||||||||||||||||   |||||||||||||| ||||||| |||||||||||||||||||    
T  18570577 atcaattctacaaattaaccataacttctataacatcaaaactaacaaaacaacaatatgttaaacccctttctagaatcttacaacccattattagaga 18570676  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    ||||||||| |||||||||||||||    
T  18570677 aagctagtctcacccttaccttaga 18570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15376144 - 15376045
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15376144 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15376045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20384554 - 20384455
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  20384554 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 20384455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 457053 - 457153
Alignment:
Q  1 caaatttgatcc-aaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  457053 caaatttgatcccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatca 457152  T
Q  99 a 99  Q
    |    
T  457153 a 457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4691155 - 4691056
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4691155 caaatttgatcccaaagtttgtctaaacatttttatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 4691056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 13315167 - 13315080
Alignment:
Q  129 atcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  13315167 atcaaaattaacaaaacaacatgttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttaga 13315080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13870077 - 13870176
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  13870077 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 13870176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16410791 - 16410890
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| ||||||| ||||||||||||||||||||    
T  16410791 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatattaaacttgacccaaaacattattttagaaaatcatcaa 16410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16580452 - 16580551
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||| ||||||||||||||||||||    
T  16580452 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatagaaaacttgacccaaaacattattttagaaaatcatcaa 16580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27217593 - 27217692
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  27217593 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 27217692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32126222 - 32126323
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  32126222 caaatttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 32126321  T
Q  100 tt 101  Q
    ||    
T  32126322 tt 32126323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14161115 - 14161020
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 95  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||| ||||||||||||||||    
T  14161115 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagtctcaaaaccatataaaacttgacccaaaacattattttagaaaatca 14161020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18628297 - 18628396
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||  ||||||||||||||||||||    
T  18628297 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatacaaaacttgacccaaaatattattttagaaaatcatcaa 18628396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18641003 - 18641102
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||  ||||||||||||||||||||    
T  18641003 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatacaaaacttgacccaaaatattattttagaaaatcatcaa 18641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20484811 - 20484910
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||||| |||||||||||    
T  20484811 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttaaaaaatcatcaa 20484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 18431445 - 18431543
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  18431445 aaatttaatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 18431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 15575755 - 15575647
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||  ||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||     
T  15575755 taaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccc 15575656  T
Q  208 taccttaga 216  Q
    |||||||||    
T  15575655 taccttaga 15575647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 47095394 - 47095506
Alignment:
Q  106 aatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||| | |||||||  |||| ||||| || |||||||||||||||||||||||||||||    
T  47095394 aatttaaccctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtccca 47095493  T
Q  204 cccttaccttaga 216  Q
    |||||||||||||    
T  47095494 cccttaccttaga 47095506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16233253 - 16233352
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  16233253 caaatttgatgccaaagtttgtctaaatatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 16233352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16460252 - 16460153
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||| ||||||||||||    
T  16460252 caaatttgatcttaaagtttgtctcaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattatttttgaaaatcatcaa 16460153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45847085 - 45846986
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  45847085 caaatttgatctcaaagtttgtctaaacatttatatacgttaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 45846986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 48212835 - 48212726
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccc--tttttagaatcatacaacccattattagagaaagctagtcccacc 205  Q
    ||||||||||||||||||||||||||||||||| ||  || ||||||||||||  ||||||||||||||||||| |||||| ||||||||||||| ||||    
T  48212835 taaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcacacc 48212736  T
Q  206 cttaccttag 215  Q
    ||||||||||    
T  48212735 cttaccttag 48212726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41523651 - 41523752
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  41523651 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 41523750  T
Q  100 tt 101  Q
    ||    
T  41523751 tt 41523752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41526113 - 41526214
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  41526113 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 41526212  T
Q  100 tt 101  Q
    ||    
T  41526213 tt 41526214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15576093 - 15575997
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcat 96  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||  |||||||| ||||||||    
T  15576093 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttataaaatcat 15575997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 18874770 - 18874663
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaaa-acaacatgttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    ||||||||||||||||||||||||||||| |||  ||||   |||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||    
T  18874770 taaccctaatttctataacatcaaaactaccaactacaag--gttaaaccccttttttcagaattatacaacccattattagagaaagctagtctcaccc 18874673  T
Q  207 ttaccttaga 216  Q
    ||||||||||    
T  18874672 ttaccttaga 18874663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 19195562 - 19195665
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacct 212  Q
    ||||||| ||||||||||||||||||||| ||| ||| | | || ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  19195562 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttcagaattatacaactcattattagagaaagctagtcccacccttacct 19195661  T
Q  213 taga 216  Q
    ||||    
T  19195662 taga 19195665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20488172 - 20488271
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||  ||||||||||||||||||||    
T  20488172 caaatttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaatcatataaaacatgacccaaaatattattttagaaaatcatcaa 20488271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26355410 - 26355311
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||| || | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26355410 caaatttcattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26357862 - 26357763
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||| || | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26357862 caaatttcattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26357763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 43745602 - 43745709
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |||| | ||| ||||||| ||||||||||||||||||||||||||||    
T  43745602 taactctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccaccct 43745701  T
Q  208 taccttag 215  Q
    ||||||||    
T  43745702 taccttag 43745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 708531 - 708427
Alignment:
Q  114 cctaatttctataacatcaaaactaaca-aaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 211  Q
    ||||||| ||||||||||||||||||||  ||| || | ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  708531 cctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctacc 708432  T
Q  212 ttaga 216  Q
    |||||    
T  708431 ttaga 708427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 14948549 - 14948449
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaat 100  Q
    ||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| |||||||||||||||||||||    
T  14948549 aaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaat 14948450  T
Q  101 t 101  Q
    |    
T  14948449 t 14948449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 20252284 - 20252180
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaaca-tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 211  Q
    ||||||||||||||||| |||||||| || ||| ||| |||||||||| |||| ||||| ||||||| |||||||||||||||||||||| |||||||||    
T  20252284 cctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacc 20252185  T
Q  212 ttaga 216  Q
    |||||    
T  20252184 ttaga 20252180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 43745221 - 43745300
Alignment:
Q  18 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||    
T  43745221 tttgtctaaacatttatatacattaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcat 43745300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18875106 - 18875009
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaa 99  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||  ||| | ||||||||||||||||||||    
T  18875106 caaatttaatcccaaagtttgtctaaacatttagatacatcaaaagagactcaaaaccatataaaaattgactcaaca-ttattttagaaaatcatcaa 18875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 24702963 - 24703064
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||| | ||||||||||||||||||||    
T  24702963 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaatcattattttagaaaatcatcaa 24703062  T
Q  100 tt 101  Q
    ||    
T  24703063 tt 24703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 24705410 - 24705511
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||| | ||||||||||||||||||||    
T  24705410 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaatcattattttagaaaatcatcaa 24705509  T
Q  100 tt 101  Q
    ||    
T  24705510 tt 24705511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8488157 - 8488093
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8488157 gttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8513816 - 8513752
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8513816 gttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11392729 - 11392632
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||   ||||||| ||||||||||||||||||||    
T  11392729 caaatttgatgtcaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaactt--cccaaaacattattttagaaaatcatcaa 11392632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 38299738 - 38299802
Alignment:
Q  152 ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaga 38299802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8514014 - 8513913
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||  | |||||||| |||| ||||| | ||||  |||||||||||||||| |||    
T  8514014 caaatttgatcccaaagtttgtctacacatttatatacatcaaaagagtatgaaaaccatataaaacttgacctaaaatattattttagaaaatcaccaa 8513915  T
Q  100 tt 101  Q
    ||    
T  8513914 tt 8513913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 15700948 - 15700887
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttac 210  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  15700948 atgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 16250287 - 16250220
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||| | ||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  16250287 atgttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttaga 16250220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14317865 - 14317966
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||||||||||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  14317865 caaatttgattccaaaacttgtctaaccatttatatacatgataagacactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 14317964  T
Q  100 tt 101  Q
    ||    
T  14317965 tt 14317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 43276797 - 43276744
Alignment:
Q  161 tttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  43276797 ttttcagaattatacaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 3287743 - 3287798
Alignment:
Q  161 tttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttaga 3287798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 4690769 - 4690662
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||||||||||| ||| || ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| |||||||||| |    
T  4690769 taaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacctt 4690670  T
Q  208 taccttag 215  Q
    ||||||||    
T  4690669 taccttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3192471 - 3192393
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||||| || |||||||||||||||| || |||| |||||| ||||||| |||| |||| ||| |||||||||    
T  3192471 caaatttgatcccaaggtttgtctaaacatttctaaacatgaaaagacactcaaatccatataaaacttaaaccaaaac 3192393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 8931230 - 8931145
Alignment:
Q  19 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 103  Q
    ||||||||||||||||| |||| |||||  |||||||||||| ||||  |||  ||||||| |||||||| |||||||||||||||    
T  8931230 ttgtctaaacatttataaacatgaaaaggcactcaaaaccatataaaatttggcccaaaacattattttacaaaatcatcaatttt 8931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9743338 - 9743237
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  9743338 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaa 9743239  T
Q  100 tt 101  Q
    ||    
T  9743238 tt 9743237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 19283040 - 19283108
Alignment:
Q  148 catgttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||||||| ||||  ||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  19283040 catgttaaaccccctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33556548 - 33556445
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||  | |||| |||||  ||||||||||||  ||| | |||  |||||| ||||||||||||||||||||    
T  33556548 caaatttgattccaaaatttgtctaaacatttccaaacatgaaaaggcactcaaaaccatacaaaacatgactcaaaacattattttagaaaatcatcaa 33556449  T
Q  100 tttt 103  Q
    ||||    
T  33556448 tttt 33556445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 48213206 - 48213107
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||| |||||||||||| ||||  |||| | ||||| ||||||||||||||||||||    
T  48213206 caaatttgattccaaaacttgtctaaccatttctatacatgataagacactcaaaaccatataaaatttgacctaaaacattattttagaaaatcatcaa 48213107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 12127233 - 12127161
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||    
T  12127233 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaga 12127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13315542 - 13315446
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 96  Q
    |||||||||| | |||  |||||||||||||| || |||| |||||  ||||||||||||  ||| | ||| ||||||| |||||||||||||||||    
T  13315542 caaatttgattccaaaacttgtctaaacatttctaaacatgaaaaggcactcaaaaccatacaaaacatgacccaaaacattattttagaaaatcat 13315446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 34958014 - 34958109
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 95  Q
    ||||||||||||||||  |||||||| ||||| |||||||   |||| |||||||||||| |||| | ||| ||||||| ||| |||| |||||||    
T  34958014 caaatttgatccaaaaacttgtctaaccatttctatacatgttaagacactcaaaaccatataaaacatgacccaaaacattaatttacaaaatca 34958109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 831915 - 831861
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||| ||||||||||  ||||||||||  ||||||||| |||||||||    
T  831915 atgttaaacccttttttagaattgtacaacccatctttagagaaaactagtccca 831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 1197095 - 1197041
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||| ||||||||||  ||||||||||  ||||||||| |||||||||    
T  1197095 atgttaaacccttttttagaattgtacaacccatctttagagaaaactagtccca 1197041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 16186859 - 16186887
Alignment:
Q  110 taaccctaatttctataacatcaaaacta 138  Q
    |||||||||||||||||||||||||||||    
T  16186859 taaccctaatttctataacatcaaaacta 16186887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 20214129 - 20214201
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||| ||||| |  ||| ||||| ||||||| ||  ||| ||||||| |||||||||||||||||||||    
T  20214129 acaacatgctaaactcaatttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttaga 20214201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 20586374 - 20586406
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  20586374 attagagaaagttagtcccacccttaccttaga 20586406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32433849 - 32433785
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||||||| ||||| |||||||   |||| |||||||||||| ||||    
T  32433849 caaatttgatccaaaaacttgtctaaccatttctatacattttaagacactcaaaaccatataaa 32433785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 48807355 - 48807323
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  48807355 attagagaaagttagtcccacccttaccttaga 48807323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 14442013 - 14442229
Alignment:
Q  4 atttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattt 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  14442013 atttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaacttgaaccaaaacattattttagaaaatcaacaattt 14442112  T
Q  103 tgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagt 199  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  14442113 tgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaaccgctttttagaatcatacaacccattattacagaaagctagt 14442212  T
Q  200 cccacccttaccttaga 216  Q
    |||||||||||||||||    
T  14442213 cccacccttaccttaga 14442229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 17685048 - 17684835
Alignment:
Q  5 tttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  17685048 tttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaatttgaaccaaaacattattttagaaaatcatcaatttt 17684949  T
Q  104 gcaatttaaccctaatttctataacatcaaaactaacaaaacaac---atgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17684948 gcaatttaaccctaatttctataacatcaaaactaacaaaacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtc 17684849  T
Q  201 ccacccttacctta 214  Q
    ||||||||||||||    
T  17684848 ccacccttacctta 17684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 54875692 - 54875474
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaa-ccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  54875692 caaatttgatctcaaagtttgtataaacatttatatacatcaaaagagacttaaaaaccatgtaaaacttgaaccaaaacattattttagaaaatcatca 54875593  T
Q  99 attttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagc 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  54875592 attttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagc 54875493  T
Q  196 tagtcccacccttacctta 214  Q
    |||||||||||||||||||    
T  54875492 tagtcccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 6159240 - 6159459
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||    
T  6159240 caaatttgatcccaaagtttgtctaaacatttttatacatcaaaagagactcaaaaccatataaaacttgaaccaaaacattattttggaaaatcatcaa 6159339  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagct 196  Q
    || ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||     
T  6159340 ttctgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcg 6159439  T
Q  197 agtcccacccttaccttaga 216  Q
    |||| |||||||||||||||    
T  6159440 agtctcacccttaccttaga 6159459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 17669911 - 17669698
Alignment:
Q  5 tttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaactt-attttagaaaatcatcaatttt 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||| ||||    
T  17669911 tttgatcccaaagtttgtctaaacatttatatacatcaaaagagactctaaaccatgtaaaactggaaccaaaactttattttagaaaatcatcattttt 17669812  T
Q  104 gcaatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17669811 gcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 17669712  T
Q  201 ccacccttacctta 214  Q
    ||| | ||||||||    
T  17669711 ccatcattacctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 2841723 - 2841504
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||| | || ||||| ||||||| ||||||||||||||||||||    
T  2841723 caaatttgatcccaaagtttgtcaaaacatttatatgcatcaaaatagactcaaaaccatattaaacttgatccaaaacattattttagaaaatcatcaa 2841624  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagct 196  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  2841623 ttctgcaatttaactctaatttctataacatcaaaactaacaaaacaacaacatgttaaacctctttttagaatcatacaacccattattagagaaagct 2841524  T
Q  197 agtcccacccttaccttaga 216  Q
    |||| |||||||||||||||    
T  2841523 agtcacacccttaccttaga 2841504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 6156546 - 6156764
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  |||  |||||||||||||| || |||| |||||  |||||||||||| |||| |||| || ||||| ||||||||||||||||||||    
T  6156546 caaatttgatctcaaaacttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggactaaaacattattttagaaaatcatcaa 6156645  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagct 196  Q
    || ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6156646 ttctgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccc-ttttagaatcatacaacccattattagagaaagct 6156744  T
Q  197 agtcccacccttaccttaga 216  Q
    ||||||||||||||||||||    
T  6156745 agtcccacccttaccttaga 6156764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 3527262 - 3527155
Alignment:
Q  109 ttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3527262 ttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccaccctt 3527163  T
Q  209 accttaga 216  Q
    ||||||||    
T  3527162 accttaga 3527155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 24549057 - 24548953
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 209  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  24549057 taaccctaatttctataacatcaaa-ctaacaaaacaacatattaaacccctttttagaatcatacaacccattattagataaagttagtctcaccctta 24548959  T
Q  210 ccttag 215  Q
    | ||||    
T  24548958 ctttag 24548953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6468565 - 6468466
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  6468565 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 6468466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17463909 - 17464008
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  17463909 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 17464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34160057 - 34160156
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  34160057 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 34160156  T

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Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45577872 - 45577773
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  45577872 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 45577773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13151219 - 13151118
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  13151219 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 13151120  T
Q  100 tt 101  Q
    ||    
T  13151119 tt 13151118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13153687 - 13153586
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  13153687 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 13153588  T
Q  100 tt 101  Q
    ||    
T  13153587 tt 13153586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 50755365 - 50755266
Alignment:
Q  106 aatttaaccctaatttctataacatcaaaactaacaaa---acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 202  Q
    |||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  50755365 aattaaaccctaatttctataacatcaaaactaacaaagcaacaacatgttaaacccctttttagaatcatacaatccattattagagaaagttagtccc 50755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10541718 - 10541619
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  10541718 caaatttgatcccaaagtttttctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 10541619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15413162 - 15413261
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15413162 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaatagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15413261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17208132 - 17208231
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  17208132 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccgaaaacattattttagaaaatcatcaa 17208231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 55477223 - 55477322
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  55477223 caaatttgatgccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 55477322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 22841405 - 22841277
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca-------tgttaaacccctttttagaatcatacaacccattatta 187  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||       |||||||||| |||| ||||| ||||||||||||||||    
T  22841405 atcaattctacaaattaaccctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattatta 22841306  T
Q  188 gagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||||||||| |||||    
T  22841305 gagaaagctagtcccacccttacattaga 22841277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 24547146 - 24547253
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    ||||||||||||||||||||||||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || ||    
T  24547146 taaccctaatttctataacatcaaa-ctaacaaaacaacaacatgttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatcc 24547244  T
Q  207 ttaccttag 215  Q
    |||||||||    
T  24547245 ttaccttag 24547253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 14520388 - 14520500
Alignment:
Q  106 aatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||| | |||||||  |||||||||| |||||||||||||||| |||||||||||||||    
T  14520388 aatttaaccctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtccca 14520487  T
Q  204 cccttaccttaga 216  Q
    |||||||||||||    
T  14520488 cccttaccttaga 14520500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14520054 - 14520153
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14520054 caaatttgatcccaaagtttgactaaacatttatacacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14520153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45606336 - 45606237
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  45606336 caaatttgatgccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 45606237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14671616 - 14671716
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatc-aaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| ||||||| |||||||||||||||||||    
T  14671616 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatca 14671715  T
Q  99 a 99  Q
    |    
T  14671716 a 14671716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 17208470 - 17208578
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | ||||| || |||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  17208470 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccaccct 17208569  T
Q  208 taccttaga 216  Q
    |||||||||    
T  17208570 taccttaga 17208578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10247153 - 10247054
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||  ||||||||||||||||||||    
T  10247153 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaatttgacccaaaatattattttagaaaatcatcaa 10247054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14508639 - 14508740
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  14508639 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaa 14508738  T
Q  100 tt 101  Q
    ||    
T  14508739 tt 14508740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15978266 - 15978365
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||| |||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15978266 caaatttgattccaaaatttctctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15978365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5215439 - 5215540
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||  |||||||||||||||| |||    
T  5215439 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctaaaaaccatataaaacttgacccaaaatattattttagaaaatcaccaa 5215538  T
Q  100 tt 101  Q
    ||    
T  5215539 tt 5215540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7780776 - 7780675
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||    
T  7780776 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgatcaaaaacattattttagaaaatcatcaa 7780677  T
Q  100 tt 101  Q
    ||    
T  7780676 tt 7780675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14152659 - 14152558
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||  || |||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  14152659 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagattctgaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaa 14152560  T
Q  100 tt 101  Q
    ||    
T  14152559 tt 14152558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16453705 - 16453605
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  16453705 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttga-ccaaaacattattttagaaaatcatcaa 16453607  T
Q  100 tt 101  Q
    ||    
T  16453606 tt 16453605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28848050 - 28847949
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||| ||    
T  28848050 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatgaa 28847951  T
Q  100 tt 101  Q
    ||    
T  28847950 tt 28847949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 54330566 - 54330465
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| || ||||  |||| ||||||  |||||||||||||||| |||    
T  54330566 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagattcaaaactatataaaatttgacccaaaatattattttagaaaatcaccaa 54330467  T
Q  100 tt 101  Q
    ||    
T  54330466 tt 54330465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 12917372 - 12917304
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  12917372 catgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttaga 12917304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 14641611 - 14641546
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  14641611 gttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttaga 14641546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 29907584 - 29907693
Alignment:
Q  110 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  29907584 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccc 29907683  T
Q  207 ttaccttaga 216  Q
    ||||||||||    
T  29907684 ttaccttaga 29907693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 29948750 - 29948859
Alignment:
Q  110 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  29948750 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccc 29948849  T
Q  207 ttaccttaga 216  Q
    ||||||||||    
T  29948850 ttaccttaga 29948859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 29997904 - 29998013
Alignment:
Q  110 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  29997904 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccc 29998003  T
Q  207 ttaccttaga 216  Q
    ||||||||||    
T  29998004 ttaccttaga 29998013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 14152462 - 14152398
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14152462 gttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttag 14152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 45803396 - 45803329
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  45803396 atgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccctaactttaga 45803329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3527636 - 3527533
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||||||||| || |||| |||||  |||||||||||| |||| |||| |||||||| |||||||| |||||||||||    
T  3527636 caaatttgattccaaaacttgtctaaacatttctaaacataaaaaggcactcaaaaccatataaaacttggaccaaaacattattttacaaaatcatcaa 3527537  T
Q  100 tttt 103  Q
    ||||    
T  3527536 tttt 3527533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 5215636 - 5215699
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||| |||| | ||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  5215636 gttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 13522386 - 13522326
Alignment:
Q  109 ttaaccctaatttctataacatcaaaactaacaaaa---caacatgttaaaccccttttta 166  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||||||| ||||||||    
T  13522386 ttaaccctaatttctataacatcaaaattaacaaaacatcaacatgttaaactccttttta 13522326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 3160740 - 3160625
Alignment:
Q  102 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagt 199  Q
    ||||||||||| |||||||||||||| |||||||||| ||| ||| || | ||||||||| |||||||||| |||  || ||| |||| |||| | ||||    
T  3160740 ttgcaatttaaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagt 3160642  T
Q  200 cccacccttaccttaga 216  Q
    | |||||||||||||||    
T  3160641 ctcacccttaccttaga 3160625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 16050909 - 16050980
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||| ||||||||||  ||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  16050909 acaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 16050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 2247931 - 2247877
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  2247931 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 2247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 45471771 - 45471809
Alignment:
Q  22 tctaaacatttatatacatcaaaagagactcaaaaccat 60  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  45471771 tctaaacatttatatacatcaaatgagactcaaaaccat 45471809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 50350929 - 50350814
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaactaacaaaa-caacat--gttaaaccccttttt--agaatcatacaacccattattagagaaagctagt 199  Q
    |||| |||||||||| |||||||||||||||||||||||| | |||   |||||||||||||||  ||||| ||| | | ||| |||| |||| | ||||    
T  50350929 caatctaaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattatata-ctcatgattaaagaaggttagt 50350831  T
Q  200 cccacccttaccttaga 216  Q
    |||||||||||||||||    
T  50350830 cccacccttaccttaga 50350814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 53646318 - 53646217
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  53646318 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 53646219  T
Q  100 tt 101  Q
    ||    
T  53646218 tt 53646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22306843 - 22306779
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    |||||||||||||||| ||||||||| ||||| |||||||   |||| |||||||||||| ||||    
T  22306843 caaatttgatccaaaaatttgtctaaccatttctatacatgttaagacactcaaaaccatataaa 22306779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25104355 - 25104291
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    |||||||||||| ||||||||||||||| ||| || |||| |||||| ||||||| |||| ||||    
T  25104355 caaatttgatcccaaagtttgtctaaacgtttctaaacatgaaaagacactcaaatccatataaa 25104291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45471726 - 45471766
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatc 41  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  45471726 caaatttgatctcaaagtttgtctaaacatttatatacatc 45471766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48043958 - 48043862
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 96  Q
    |||||||||||| |||  |||||| |||||||||| |||| |||||  |||||||||||| ||||  ||| |||||||| ||| |||| ||||||||    
T  48043958 caaatttgatcccaaaacttgtctgaacatttataaacatgaaaaggcactcaaaaccatataaaatttggaccaaaacattaatttacaaaatcat 48043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25201708 - 25201803
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 95  Q
    |||||||||||| |||  |||||||||||||| || |||| |||||  |||||||||||| ||||  ||| |||||||| ||| |||| |||||||    
T  25201708 caaatttgatcccaaaacttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaatttggaccaaaacattaatttacaaaatca 25201803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12917793 - 12917715
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||| | |||  ||||||||| |||| || |||| |||||| |||||||||||| |||| |||| ||||||||    
T  12917793 caaatttgattccaaaacttgtctaaatatttctaaacatgaaaagacactcaaaaccatataaaacttggaccaaaac 12917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 19568256 - 19568206
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||    
T  19568256 agaatcatacaacttagaattagagaaagttagtcccacccttaccttaga 19568206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 15566733 - 15566798
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||||| |||||||  |  ||||||||||| ||||||||||||||| |||||    
T  15566733 gttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttaga 15566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 5200273 - 5200241
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  5200273 attagagaaagttagtcccacccttaccttaga 5200241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 12155138 - 12155102
Alignment:
Q  102 ttgcaatttaaccctaatttctataacatcaaaacta 138  Q
    |||||| |||||||||| |||||||||||||||||||    
T  12155138 ttgcaaattaaccctaacttctataacatcaaaacta 12155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 13185917 - 13185949
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  13185917 attagagaaagttagtcccacccttaccttaga 13185949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 25202149 - 25202188
Alignment:
Q  176 aacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  25202149 aacccattattagcgaa-gctagtcccacccttaccttaga 25202188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 40808018 - 40808050
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  40808018 attagagaaagttagtcccacccttaccttaga 40808050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 40812855 - 40812887
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  40812855 attagagaaagttagtcccacccttaccttaga 40812887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 44274440 - 44274472
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  44274440 attagagaaagttagtcccacccttaccttaga 44274472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 3e-87; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 20588471 - 20588690
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  20588471 caaatttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaa 20588570  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaaccc--ctttttagaatcatacaacccattattagagaaag 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  20588571 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaag 20588670  T
Q  195 ctagtcccacccttacctta 214  Q
    ||| ||||||||||||||||    
T  20588671 ctaatcccacccttacctta 20588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 20593009 - 20593228
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  20593009 caaatttgatcccaaagtttgtctaaacatttatataaataaaaagagactcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaa 20593108  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaaccc--ctttttagaatcatacaacccattattagagaaag 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  20593109 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaag 20593208  T
Q  195 ctagtcccacccttacctta 214  Q
    ||| ||||||||||||||||    
T  20593209 ctaatcccacccttacctta 20593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 34392698 - 34392822
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  34392698 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 34392797  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    ||||||||| |||||||||||||||    
T  34392798 aagctagtcacacccttaccttaga 34392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 45499472 - 45499596
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  45499472 atcaactttgcaatttaaccctaatttctataacgttaaaactaacaaaacaacaacatgttaaacccctttatagaatcatacaacccattattagaga 45499571  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    ||||||||| |||||||||||||||    
T  45499572 aagctagtctcacccttaccttaga 45499596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 8306552 - 8306660
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaaaac---aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  8306552 aaccctaatttctataacatcaaaactaacaaaacgacaacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactct 8306651  T
Q  208 taccttaga 216  Q
    |||||||||    
T  8306652 taccttaga 8306660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13989597 - 13989696
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  13989597 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 13989696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21474516 - 21474416
Alignment:
Q  1 caaatttgatcc-aaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  21474516 caaatttgatcccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatca 21474417  T
Q  99 a 99  Q
    |    
T  21474416 a 21474416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14237872 - 14237773
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14237872 caaatttgatcccaaagtttgtctaaacatttatatgcatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51083008 - 51083110
Alignment:
Q  1 caaatttgatcc-aaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  |||||||||||||||||||    
T  51083008 caaatttgatcccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatca 51083107  T
Q  99 att 101  Q
    |||    
T  51083108 att 51083110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23593162 - 23593060
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa--cttattttagaaaatcatca 98  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||   |||||||| ||||||||||    
T  23593162 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaaacattattttaaaaaatcatca 23593063  T
Q  99 att 101  Q
    |||    
T  23593062 att 23593060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16362650 - 16362750
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa--cttattttagaaaatcatca 98  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||   |||||||||||||||||||    
T  16362650 caaatttgatcccaaagtttgtttaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaaacattattttagaaaatcatca 16362749  T
Q  99 a 99  Q
    |    
T  16362750 a 16362750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 28476840 - 28476732
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||| |||||||||||||| |||||||||||||    
T  28476840 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccaccct 28476741  T
Q  208 taccttaga 216  Q
    |||||||||    
T  28476740 taccttaga 28476732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24719954 - 24719855
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||| | ||||||||||||||||||||    
T  24719954 caaacttgatcccaaagtttgtctaaacatttatatacatctaaagagactcaaaaccatataaaacttgacccaaatcattattttagaaaatcatcaa 24719855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41373205 - 41373304
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||| |||||    
T  41373205 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaattatcaa 41373304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4596105 - 4596004
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| ||||||||||||||||| ||    
T  4596105 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgacccaaaacattattttagaaaatcattaa 4596006  T
Q  100 tt 101  Q
    ||    
T  4596005 tt 4596004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21922720 - 21922619
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  21922720 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 21922621  T
Q  100 tt 101  Q
    ||    
T  21922620 tt 21922619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 12710813 - 12710921
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||| ||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||||||||||||||||||| | |    
T  12710813 taaccttaatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctt 12710912  T
Q  208 taccttaga 216  Q
    |||||||||    
T  12710913 taccttaga 12710921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 35895069 - 35895153
Alignment:
Q  132 aaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||| |||||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  35895069 aaaattaacaaaacaacatgttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttaga 35895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 24719620 - 24719514
Alignment:
Q  106 aatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||| |||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| |||||||||||||||||||||||||||| |||    
T  24719620 aatttaaccttaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagt-cca 24719522  T
Q  204 cccttacc 211  Q
    ||||||||    
T  24719521 cccttacc 24719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 17901860 - 17901792
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  17901860 catgttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttaga 17901792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 38056762 - 38056670
Alignment:
Q  126 aacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38056762 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttaga 38056670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 50544861 - 50544926
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  50544861 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttaga 50544926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 635064 - 635002
Alignment:
Q  154 aaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttaga 635002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21841500 - 21841603
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaa--catttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatc 97  Q
    |||||||||| | ||| ||||||||||  ||| |||||| |||||||||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  21841500 caaatttgattccaaaatttgtctaaaaacatgtatatagatcaaaagagactcaaaaccatataaaatttgaccaaaaacattattttagaaaatcatc 21841599  T
Q  98 aatt 101  Q
    ||||    
T  21841600 aatt 21841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 24007330 - 24007224
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaa-aacaacat--gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||| |||||||||||||||||||||| ||| |||   ||||||||  |||| ||||| |||||| | ||||| |||||||||||||||||||||    
T  24007330 aaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaatc-attatcagagaaagctagtcccaccct 24007232  T
Q  208 taccttag 215  Q
    ||||||||    
T  24007231 taccttag 24007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 22145729 - 22145666
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  22145729 gttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 6834162 - 6834230
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||| ||||| ||||||| ||||||||||||||||||||  ||||||| |||||||    
T  6834162 catgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttaga 6834230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 7703140 - 7703176
Alignment:
Q  180 cattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||||||||||||||||||||    
T  7703140 cattattagagaaagctagtcccacccttaccttaga 7703176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8276052 - 8275988
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||||| |||| ||||| |||| || |||||||||| |||||||||| ||||||||||||||    
T  8276052 gttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttag 8275988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 51336467 - 51336532
Alignment:
Q  150 tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||| || |||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  51336467 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 51336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 16401897 - 16401963
Alignment:
Q  146 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| | |||||||||||||||||||    
T  16401897 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gttagtcccacccttacctta 16401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 7051970 - 7051920
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||    
T  7051970 agaatcatacaacttagaattagagaaagttagtcccacccttaccttaga 7051920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 24723399 - 24723349
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||    
T  24723399 agaatcatacaacttagaattagagaaagttagtcccacccttaccttaga 24723349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44892241 - 44892343
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttga-accaaaac-ttattttagaaaatcatca 98  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| |||||  ||||||| |||||||||||||||| ||    
T  44892241 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgaccccaaaacattattttagaaaatcacca 44892340  T
Q  99 att 101  Q
    |||    
T  44892341 att 44892343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 12327807 - 12327742
Alignment:
Q  150 tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||| || |||| |||||||||||||  |  ||||||||||| ||||| ||||||||||||||    
T  12327807 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttag 12327742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 21168914 - 21168987
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| ||||| |  ||||||||| |||||||| |  ||||||||||| || | ||||||||||||||||    
T  21168914 aacaacatgctaaactcaattttagaattatacaacctaaaattagagaaagttaattccacccttaccttaga 21168987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 21188147 - 21188111
Alignment:
Q  102 ttgcaatttaaccctaatttctataacatcaaaacta 138  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  21188147 ttgcaatttaaacctaacttctataacatcaaaacta 21188111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 39942 - 40161
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  39942 caaatttgatcccaaagtttgtctaaatatttatatatatcaaaagagactcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaa 40041  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagct 196  Q
    || ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40042 ttctgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagtt 40141  T
Q  197 agtcccacccttaccttaga 216  Q
    |||| || ||||||||||||    
T  40142 agtcgcatccttaccttaga 40161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 5e-86; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 32607535 - 32607314
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacat--caaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatc 97  Q
    |||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||| ||| |||| ||||||||||||| |||||||||||||| |||    
T  32607535 caaatttgatcccaaagtttgtctaaacatttatatatatatcaaaagagactcaaaaacatataaaacttgaaccaaaacattattttagaaaattatc 32607436  T
Q  98 aattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaag 194  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  32607435 aattttgcaatttaactctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 32607336  T
Q  195 ctagtcccacccttaccttaga 216  Q
    ||||||||||||||||||||||    
T  32607335 ctagtcccacccttaccttaga 32607314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 21398764 - 21398642
Alignment:
Q  97 caattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaa---catgttaaacccc-tttttagaatcatacaacccattattagagaa 192  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||    
T  21398764 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaaccccctttttagaatcatacaacccattattagagaa 21398666  T
Q  193 agctagtcccacccttaccttaga 216  Q
    ||||| ||||||||||||||||||    
T  21398665 agctaatcccacccttaccttaga 21398642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18744440 - 18744539
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18744440 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 39245868 - 39245966
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  39245868 aaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 39245966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23199652 - 23199553
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23199652 caaatttgatcccaaagtttgtgtaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23199553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38620167 - 38620266
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||| ||||||||||||||||||||    
T  38620167 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacatgacccaaaacgttattttagaaaatcatcaa 38620266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29346712 - 29346813
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||    
T  29346712 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaa 29346811  T
Q  100 tt 101  Q
    ||    
T  29346812 tt 29346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29349185 - 29349286
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||    
T  29349185 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaa 29349284  T
Q  100 tt 101  Q
    ||    
T  29349285 tt 29349286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29351658 - 29351759
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||    
T  29351658 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaa 29351757  T
Q  100 tt 101  Q
    ||    
T  29351758 tt 29351759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39364115 - 39364214
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  39364115 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 39364214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 264198 - 264098
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  264198 caaatttgatccaaa-gtttgtctaaacatttatattcatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 264100  T
Q  100 tt 101  Q
    ||    
T  264099 tt 264098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 16063701 - 16063805
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 211  Q
    ||||||| ||||||||||||||||||||| ||| ||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16063701 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttacc 16063800  T
Q  212 ttaga 216  Q
    |||||    
T  16063801 ttaga 16063805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 18744820 - 18744928
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  18744820 taaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccaccct 18744919  T
Q  208 taccttaga 216  Q
    |||||||||    
T  18744920 taccttaga 18744928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23065247 - 23065346
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||   ||||||| |||||||||||||| |||||    
T  23065247 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaactttccccaaaacattattttagaaaattatcaa 23065346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 23199313 - 23199207
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||||||||||||||  || ||| ||| | |||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23199313 taaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccaccct 23199214  T
Q  208 tacctta 214  Q
    |||||||    
T  23199213 tacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10732368 - 10732267
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||    
T  10732368 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaa 10732269  T
Q  100 tt 101  Q
    ||    
T  10732268 tt 10732267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42244793 - 42244692
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||    
T  42244793 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaa 42244694  T
Q  100 tt 101  Q
    ||    
T  42244693 tt 42244692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 1627174 - 1627071
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa--aacaacatgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    |||||||||||||||||||||||||||||||||  || |  | | ||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  1627174 taaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccaccc 1627075  T
Q  207 ttac 210  Q
    ||||    
T  1627074 ttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 660736 - 660841
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 208  Q
    |||||| |||||||||||||||||||||||||| ||| ||| | | || || |||| ||||| ||||||||| ||||||||||||||||||||| |||||    
T  660736 taacccaaatttctataacatcaaaactaacaacaactacaaggttaaacctttttcagaattatacaaccccttattagagaaagctagtccc-ccctt 660834  T
Q  209 accttag 215  Q
    |||||||    
T  660835 accttag 660841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20909744 - 20909846
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttatttt-agaaaatcatca 98  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||  |||| ||||||  ||||||| | ||||||||||    
T  20909744 caaatttgatcccaaagtttgtctaaacaattatatacatcaaaaaagactcaaaaccatataaaaattgacccaaaatattattttaaaaaaatcatca 20909843  T
Q  99 att 101  Q
    |||    
T  20909844 att 20909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 31621957 - 31622023
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 209  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  31621957 aacaacatgttaaacccatttttagaatcatacaaccaattattagagaaagatagttccaccctta 31622023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 22111911 - 22111977
Alignment:
Q  97 caattttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccct 161  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  22111911 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccct 22111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 660287 - 660340
Alignment:
Q  26 aacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||||||    
T  660287 aacatttatatacatcaaaagagactcaaaaccatatcaaacttgaaccaaaac 660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14026066 - 14025965
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  14026066 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaa 14025967  T
Q  100 tt 101  Q
    ||    
T  14025966 tt 14025965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 6551392 - 6551288
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 211  Q
    ||||||| ||||||||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| ||||| ||||||||||    
T  6551392 cctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttacc 6551293  T
Q  212 ttaga 216  Q
    |||||    
T  6551292 ttaga 6551288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 20313263 - 20313329
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||  ||| ||||| ||| |||||| |||||||||| |||||||||||||||||||||||    
T  20313263 catgttaaaccctatttcagaattata-aacccactattagagaa-gctagtcccacccttaccttaga 20313329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 21504082 - 21504114
Alignment:
Q  106 aatttaaccctaatttctataacatcaaaacta 138  Q
    |||||||||||||||||||||||||||||||||    
T  21504082 aatttaaccctaatttctataacatcaaaacta 21504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21503711 - 21503789
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||| | |||  |||||||||||||| || |||| |||||  |||||||||||| |||| |||| ||||||||    
T  21503711 caaatttgattccaaaacttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggaccaaaac 21503789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8504147 - 8504046
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||  |||||||||||| ||| |||    
T  8504147 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaatattattttagaaattcaccaa 8504048  T
Q  100 tt 101  Q
    ||    
T  8504047 tt 8504046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8833465 - 8833364
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| | ||||| |||||||||||| ||| |||    
T  8833465 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgaccaaaaacattattttagaaattcaccaa 8833366  T
Q  100 tt 101  Q
    ||    
T  8833365 tt 8833364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 31622098 - 31622171
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| ||||| |  ||| ||||| |||||||| |  ||||||||||| || ||||||||||||||||||    
T  31622098 aacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttaga 31622171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 20469206 - 20469174
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  20469206 attagagaaagttagtcccacccttaccttaga 20469174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 21300074 - 21300042
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  21300074 attagagaaagttagtcccacccttaccttaga 21300042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 21617958 - 21617926
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  21617958 attagagaaagttagtcccacccttaccttaga 21617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 36508697 - 36508633
Alignment:
Q  150 tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||| || |||| |||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  36508697 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 36508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 55583031 - 55583250
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||  |||||||||||||| || | || ||||   |||||||||||| |||| |||| |||||||| ||||||||||||||||||||    
T  55583031 caaatttgatcccaaaacttgtctaaacatttctaaatatgaaaatgcactcaaaaccatataaaacttggaccaaaacattattttagaaaatcatcaa 55583130  T
Q  100 ttttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagct 196  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55583131 ttttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttataatcatacaacccattattagagaaagct 55583230  T
Q  197 agtcccacccttaccttaga 216  Q
    ||||||||||||||||||||    
T  55583231 agtcccacccttaccttaga 55583250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 9622419 - 9622543
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||    
T  9622419 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcagacaacccattattagaga 9622518  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||||||||    
T  9622519 aagctagtcccacccttaccttaga 9622543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 10273350 - 10273437
Alignment:
Q  129 atcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10273350 atcaaaattaacaaaacaacatgttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 10273437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7640617 - 7640518
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  7640617 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 7640518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15117783 - 15117684
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15117783 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15117684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18239043 - 18238944
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18239043 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18238944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3485700 - 3485801
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  3485700 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 3485799  T
Q  100 tt 101  Q
    ||    
T  3485800 tt 3485801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12033202 - 12033101
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  12033202 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 12033103  T
Q  100 tt 101  Q
    ||    
T  12033102 tt 12033101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25030996 - 25031097
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  25030996 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 25031095  T
Q  100 tt 101  Q
    ||    
T  25031096 tt 25031097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2424881 - 2424782
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||| |||||||||||    
T  2424881 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttaaaaaatcatcaa 2424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19243434 - 19243533
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||||    
T  19243434 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattatagaaaatcatcaa 19243533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44772514 - 44772415
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  44772514 caaatttaatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 44772415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 14631081 - 14631189
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  14631081 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 14631180  T
Q  208 taccttaga 216  Q
    |||||||||    
T  14631181 taccttaga 14631189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 25513797 - 25513905
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaaca-tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||| |    
T  25513797 taaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccat 25513896  T
Q  208 taccttaga 216  Q
    |||||||||    
T  25513897 taccttaga 25513905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18022844 - 18022944
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatc-aaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| ||||||| |||||||||||||||||||    
T  18022844 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatca 18022943  T
Q  99 a 99  Q
    |    
T  18022944 a 18022944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1836949 - 1836850
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  1836949 caaatttgatgtcaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 1836850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 14873512 - 14873415
Alignment:
Q  5 tttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 101  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  14873512 tttgatccaaaaacttgtctaaccatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 14873415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29268087 - 29268188
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  29268087 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 29268186  T
Q  100 tt 101  Q
    ||    
T  29268187 tt 29268188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50221768 - 50221668
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  50221768 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttga-ccaaaacattattttagaaaatcatcaa 50221670  T
Q  100 tt 101  Q
    ||    
T  50221669 tt 50221668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 44616023 - 44616123
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaat 100  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| |||||||||||||||||||||    
T  44616023 aaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaat 44616122  T
Q  101 t 101  Q
    |    
T  44616123 t 44616123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 26446153 - 26446260
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||  |||| ||||| |||||||||||||||||||||||||||||| |||||    
T  26446153 taaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctaccct 26446252  T
Q  208 taccttag 215  Q
    ||| ||||    
T  26446253 tactttag 26446260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14718143 - 14718042
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||    
T  14718143 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgatcaaaaacattattttagaaaatcatcaa 14718044  T
Q  100 tt 101  Q
    ||    
T  14718043 tt 14718042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 26445677 - 26445746
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttga 71  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  26445677 aaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttga 26445746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 16296897 - 16296992
Alignment:
Q  123 tataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||| ||| || | ||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttaga 16296992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 16296819 - 16296881
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaaaacaac---atgttaaacccctttttagaat 170  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  16296819 aaccctaatttctataacatcaaaactaacaaaacaacaatatgttaaacccctttttagaat 16296881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 12424355 - 12424290
Alignment:
Q  151 gttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12424355 gttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 13847200 - 13847254
Alignment:
Q  161 tttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  13847200 tttttagaattatacaacccattattagagaaagctagtctcacccttaccttag 13847254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 9638999 - 9639064
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  9638999 gttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttaga 9639064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 35660906 - 35661002
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 208  Q
    |||||||  |||||||||||||||||||| ||| ||| | |||||||  |||| | ||| |||||||||||||||||||||||||||||||||||||    
T  35660906 cctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 33186892 - 33186955
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  33186892 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 2424492 - 2424386
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 208  Q
    ||||||||||||||||||||||||||||| || ||| ||| | |||||||| |||| | ||| |||||||  |  ||||||||||| ||||| |||||||    
T  2424492 aaccctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcaccctt 2424393  T
Q  209 accttag 215  Q
    |||||||    
T  2424392 accttag 2424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 15239879 - 15239814
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||| | ||||||  ||||||||||||||||||||| |||||||||||||||    
T  15239879 gttaaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttaga 15239814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19566177 - 19566076
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  19566177 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaa 19566078  T
Q  100 tt 101  Q
    ||    
T  19566077 tt 19566076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33186695 - 33186796
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  33186695 caaatttgattccaaaacttgtctaaccatttctatacatgataagacactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 33186794  T
Q  100 tt 101  Q
    ||    
T  33186795 tt 33186796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44023862 - 44023761
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||| |||||||||||| |||| ||||| | ||||| |||||||||||||||| |||    
T  44023862 caaatttgattccaaaacttgtctaaccatttctatacatgataagacactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcaccaa 44023763  T
Q  100 tt 101  Q
    ||    
T  44023762 tt 44023761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12424552 - 12424451
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| || |||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  12424552 caaatttgattccaaaacttgtctaaccatttctaaacatgataagaaactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 12424453  T
Q  100 tt 101  Q
    ||    
T  12424452 tt 12424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10273195 - 10273273
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||||| |||  || ||||||||||| || |||| |||||  |||||||||||| |||| |||| ||||||||    
T  10273195 caaatttgatcccaaaacttttctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggaccaaaac 10273273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 17143009 - 17143063
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    |||||||||||||||| ||||| ||||||| |||  ||||||||||||| |||||    
T  17143009 atgttaaaccccttttcagaattatacaactcatctttagagaaagctattccca 17143063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 19434607 - 19434557
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||    
T  19434607 agaatcatacaacttagaattagagaaagttagtcccacccttaccttaga 19434557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11478869 - 11478768
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  ||||||||| |||| ||||||| | |||  |||||||| ||| |||| ||||| ||||||  |||||||||||||| |||||    
T  11478869 caaatttgattccaaaacttgtctaaaaatttctatacatgataaggcactcaaaatcatataaaacttgacccaaaatattattttagaaaattatcaa 11478770  T
Q  100 tt 101  Q
    ||    
T  11478769 tt 11478768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 14477573 - 14477606
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaacta 138  Q
    |||||||||||||| |||||||||||||||||||    
T  14477573 caatttaaccctaacttctataacatcaaaacta 14477606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 25513583 - 25513636
Alignment:
Q  49 actcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 101  Q
    |||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  25513583 actcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 25513636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33243553 - 33243452
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| ||||  |||| ||||||| |||||||||||| ||| |||    
T  33243553 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaatttgacccaaaacattattttagaaattcaccaa 33243454  T
Q  100 tt 101  Q
    ||    
T  33243453 tt 33243452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 45314194 - 45314157
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaactaacaa 142  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  45314194 caatctaaccctaatctctataacatcaaaactaacaa 45314157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 46741040 - 46741093
Alignment:
Q  49 actcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 101  Q
    |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  46741040 actcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 46741093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11425737 - 11425801
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||| ||| |||||||||||||   |||| |||||||||||| ||||    
T  11425737 caaatttgatccaaaaacttgtgtaaccatttatatacatgttaagacactcaaaaccatataaa 11425801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 15115244 - 15115276
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  15115244 attagagaaagttagtcccacccttaccttaga 15115276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 37019652 - 37019724
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| ||||| |||||||||||||||    
T  37019652 acaacatgttaaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttaga 37019724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42875589 - 42875653
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||||||| |||||||||||||   |||  |||||||||||| ||||    
T  42875589 caaatttgatccaaaaacttgtctaaccatttatatacatgttaaggcactcaaaaccatataaa 42875653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 10446147 - 10446271
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  10446147 atcaattttgcaaattaaccctaatttctataacatcgaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 10446246  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||||||||    
T  10446247 aagctagtcccacccttaccttaga 10446271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18334023 - 18333924
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18334023 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18333924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19858353 - 19858254
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  19858353 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 19858254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24423278 - 24423377
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  24423278 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 24423377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26923876 - 26923777
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26923876 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26923777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33865009 - 33865108
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  33865009 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 33865108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2290610 - 2290510
Alignment:
Q  1 caaatttgatcc-aaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  2290610 caaatttgatcccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatca 2290511  T
Q  99 a 99  Q
    |    
T  2290510 a 2290510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22782959 - 22783058
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  22782959 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 22783058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1540342 - 1540241
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  1540342 caaatttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 1540243  T
Q  100 tt 101  Q
    ||    
T  1540242 tt 1540241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21686430 - 21686329
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  21686430 caaattttatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 21686331  T
Q  100 tt 101  Q
    ||    
T  21686330 tt 21686329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12743051 - 12743152
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  12743051 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 12743150  T
Q  100 tt 101  Q
    ||    
T  12743151 tt 12743152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17882926 - 17882825
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  17882926 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 17882827  T
Q  100 tt 101  Q
    ||    
T  17882826 tt 17882825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23656132 - 23656233
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||  |||||||||||||||| |||    
T  23656132 caaatttgatcctaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcaccaa 23656231  T
Q  100 tt 101  Q
    ||    
T  23656232 tt 23656233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8055762 - 8055861
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  8055762 caaatttgatgtcaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 8055861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17318382 - 17318281
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| |||||||||||||||| |||    
T  17318382 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgatccaaaacattattttagaaaatcaccaa 17318283  T
Q  100 tt 101  Q
    ||    
T  17318282 tt 17318281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33862528 - 33862629
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||    
T  33862528 caaatttgattccaaaatttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaa 33862627  T
Q  100 tt 101  Q
    ||    
T  33862628 tt 33862629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 21683171 - 21683074
Alignment:
Q  119 tttctataacatcaaaactaacaaaacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||||||||||||||||  | ||| ||| | |||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21683171 tttctataacatcaaaactacaacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttag 21683074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 29045257 - 29045325
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  29045257 catgttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttaga 29045325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 23658078 - 23658143
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  23658078 gttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttaga 23658143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 19825576 - 19825484
Alignment:
Q  126 aacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| ||| ||| | ||||| || |||| ||||| || |||||||||||||||||||||||||| |||||||||||||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttaga 19825484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 1818884 - 1818927
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaacta 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1818884 atcaattttgcaatttaaccctaatttctataacatcaaaacta 1818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 15998835 - 15998942
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| || | ||||||| | |||| ||||| |||||||  |  ||||||||||| ||||| ||||||    
T  15998835 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcaccct 15998934  T
Q  208 taccttag 215  Q
    ||||||||    
T  15998935 taccttag 15998942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 20410616 - 20410512
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||  |||||||||||| || ||| ||| | ||||| || |||| ||||| |||||||||||||||||||||||||| | |||||||    
T  20410616 taaccctaatttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccaccct 20410519  T
Q  208 tacctta 214  Q
    |||||||    
T  20410518 tacctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17856851 - 17856773
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||||  || |||||||||||| |||||| |||| |||||| |||||||||||| ||||  ||||||||||||    
T  17856851 caaatttgatcacaaggtttgtctaaacgtttataaacatgaaaagacactcaaaaccatataaaagttgaaccaaaac 17856773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 18982561 - 18982626
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| || ||||||| ||||||||||    
T  18982561 gttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttaga 18982626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 2077072 - 2077135
Alignment:
Q  37 acatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||||||||||||||    
T  2077072 acatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcatcaa 2077135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 34140554 - 34140454
Alignment:
Q  116 taatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctt 213  Q
    ||||| ||||||||||||||||||||| ||| ||| | |||||||   ||| | ||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  34140554 taattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattagagaa-gctagtcccacccttacctt 34140457  T
Q  214 aga 216  Q
    |||    
T  34140456 aga 34140454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18928517 - 18928618
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  ||||||||  |||| ||||||| | |||  |||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18928517 caaatttgattccaaaacttgtctaacaatttctatacatgataaggcactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 18928616  T
Q  100 tt 101  Q
    ||    
T  18928617 tt 18928618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22557041 - 22557142
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| | || ||||| ||||||| |||||||||||||||| |||    
T  22557041 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatatgaaacttgacccaaaacattattttagaaaatcaccaa 22557140  T
Q  100 tt 101  Q
    ||    
T  22557141 tt 22557142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 15890782 - 15890710
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||    
T  15890782 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaga 15890710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 34153109 - 34153070
Alignment:
Q  176 aacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  34153109 aacccattattagagaa-gctagtcccacccttaccttaga 34153070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 31734518 - 31734601
Alignment:
Q  19 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 101  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  31734518 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 31734601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 10445807 - 10445893
Alignment:
Q  18 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 103  Q
    ||||||||||||||| || |||| |||||  ||||||||||||  ||| | ||| | ||||| |||||||| |||||||||||||||    
T  10445807 tttgtctaaacatttctaaacatgaaaaggcactcaaaaccatacaaaacatgaccaaaaacattattttacaaaatcatcaatttt 10445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18455332 - 18455231
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  | |||||| ||| |||| ||||| ||||||| |||||||||||||||| |||    
T  18455332 caaatttgattccaaaaattgtctaaccatttctatacatgataaggcaatcaaaatcatataaaacttgacccaaaacattattttagaaaatcaccaa 18455233  T
Q  100 tt 101  Q
    ||    
T  18455232 tt 18455231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 25601438 - 25601401
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaactaacaa 142  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  25601438 caatctaaccctaatttctataacatgaaaactaacaa 25601401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23150547 - 23150483
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||||||| ||||| |||||||   |||| |||||||||||| ||||    
T  23150547 caaatttgatccaaaaacttgtctaaccatttctatacatgttaagacactcaaaaccatataaa 23150483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 8e-51; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 28345107 - 28344986
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 194  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28345107 atcaattttgcaaattaaccctaatttctataacatcgaaactaacaaaacaacatgttaaacccctttttagaatcatacagcccattattagagaaag 28345008  T
Q  195 ctagtcccacccttaccttaga 216  Q
    |||||| |||||||| ||||||    
T  28345007 ctagtcacacccttatcttaga 28344986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18809674 - 18809773
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18809674 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18809773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23711444 - 23711345
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23711444 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23711345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26506110 - 26506209
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26506110 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26506209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27920195 - 27920096
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  27920195 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 27920096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 23801477 - 23801550
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23801477 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 23801550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38968211 - 38968312
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  38968211 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 38968310  T
Q  100 tt 101  Q
    ||    
T  38968311 tt 38968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39683046 - 39683146
Alignment:
Q  1 caaatttgatcc-aaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatca 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  39683046 caaatttgatcccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatca 39683145  T
Q  99 a 99  Q
    |    
T  39683146 a 39683146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 149610 - 149499
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaaaac---aacatgttaaaccccttttt---agaatcatacaacccattattagagaaagctagtcccac 204  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||   ||||| ||||||| |||||||||||||||||||| ||||    
T  149610 aaccctaatttctataacatcaaaactaacaaaacgacaacatgttaaaccccttttttttagaattatacaactcattattagagaaagctagttccac 149511  T
Q  205 ccttaccttaga 216  Q
    ||||||||||||    
T  149510 ccttaccttaga 149499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21315922 - 21315823
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  21315922 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 21315823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21368900 - 21368999
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  21368900 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 21368999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23131593 - 23131692
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23131593 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23131692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23134060 - 23134159
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23134060 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26508588 - 26508687
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26508588 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaacagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26508687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32038928 - 32038829
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  32038928 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 32038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24897626 - 24897525
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  24897626 caaatttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 24897527  T
Q  100 tt 101  Q
    ||    
T  24897526 tt 24897525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24905063 - 24904962
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  24905063 caaatttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 24904964  T
Q  100 tt 101  Q
    ||    
T  24904963 tt 24904962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34401953 - 34401854
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  34401953 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 34401854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 572129 - 572230
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| |||||||||||||| |||||    
T  572129 caaatttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaattatcaa 572228  T
Q  100 tt 101  Q
    ||    
T  572229 tt 572230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24900109 - 24900008
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||  ||||||||||||||||||||    
T  24900109 caaatttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaatattattttagaaaatcatcaa 24900010  T
Q  100 tt 101  Q
    ||    
T  24900009 tt 24900008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24902586 - 24902485
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||  ||||||||||||||||||||    
T  24902586 caaatttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaatattattttagaaaatcatcaa 24902487  T
Q  100 tt 101  Q
    ||    
T  24902486 tt 24902485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24907538 - 24907437
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||| |||||||||||||| |||||    
T  24907538 caaatttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgagccaaaacattattttagaaaataatcaa 24907439  T
Q  100 tt 101  Q
    ||    
T  24907438 tt 24907437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 21335372 - 21335264
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||| |||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  21335372 taaccataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 21335273  T
Q  208 taccttaga 216  Q
    |||||||||    
T  21335272 taccttaga 21335264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9785374 - 9785473
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||||||||||||||    
T  9785374 caaatttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcatcaa 9785473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21335712 - 21335613
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||  |||||| |||||||| |||||||||||    
T  21335712 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaatttgactcaaaacattattttaaaaaatcatcaa 21335613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 21315576 - 21315474
Alignment:
Q  116 taatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctt 213  Q
    |||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21315576 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 21315477  T
Q  214 aga 216  Q
    |||    
T  21315476 aga 21315474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23136299 - 23136400
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  23136299 caaatttgattctaaaatttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 23136398  T
Q  100 tt 101  Q
    ||    
T  23136399 tt 23136400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 21369239 - 21369347
Alignment:
Q  110 taaccctaatttctataacatcaaaactaaca-aaacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||||||||||||||| | |||| ||| | |||||||| |||| ||||| |||||||||||| |||||||||||| ||||||||||    
T  21369239 taaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccaccct 21369338  T
Q  208 taccttaga 216  Q
    |||||||||    
T  21369339 taccttaga 21369347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22690471 - 22690569
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||| ||||||||||||||||||||    
T  22690471 caaatttgatctcaaagtttgtctaaacatttatatacctcaaaagagactcaaaacc-tataaaacttgacccaaaacattattttagaaaatcatcaa 22690569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22695067 - 22695165
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||| ||||||||||||||||||||    
T  22695067 caaatttgatctcaaagtttgtctaaacatttatatacctcaaaagagactcaaaacc-tataaaacttgacccaaaacattattttagaaaatcatcaa 22695165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 23610572 - 23610679
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||| ||||| ||| | | | |||||||  |||| | ||| ||||||||||||||||||||||||||||||||||||    
T  23610572 taaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccct 23610671  T
Q  208 taccttag 215  Q
    ||||||||    
T  23610672 taccttag 23610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22686682 - 22686760
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||||| |||||||||||||||||||||| |||| |||| |||||||||||||| |||| |||||||||||||    
T  22686682 caaatttgatcccaaagtttgtctaaacatttatacacataaaaaaagactcaaaaccatataaaacttgaaccaaaac 22686760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23610267 - 23610354
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttatttta 87  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| | ||||| ||||||||    
T  23610267 caaatttgatccctaagtttgtctaaacatttatatacatcaaaagagactcaaagccatataaaacttgaccaaaaacattatttta 23610354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28577830 - 28577932
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatat------acatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaat 93  Q
    |||||||||||| |||||||||||||||||||||||      ||||||||||||||||||| |||| |||| ||||| ||||||| ||||||||||||||    
T  28577830 caaatttgatcccaaagtttgtctaaacatttatatacatatacatcaaaagagactcaaatccatataaaacttgacccaaaacattattttagaaaat 28577929  T
Q  94 cat 96  Q
    |||    
T  28577930 cat 28577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 25584233 - 25584161
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaacccctttt 164  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  25584233 atcaattctacaaattaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttt 25584161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 34491364 - 34491239
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca-------tgttaaacccctttttagaatcatacaacccattatt- 186  Q
    ||||||||||||||| |||||||| || |||||||||||||||| ||||||||||       |||||||||| |||| ||||| ||||||| | |||||     
T  34491364 atcaattttgcaatt-aaccctaaattttataacatcaaaacta-caaaacaacaacaaccatgttaaaccctttttcagaattatacaactcgttattt 34491267  T
Q  187 agagaaagctagtcccacccttaccttag 215  Q
    |||||| ||||||||||||||||||||||    
T  34491266 agagaa-gctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 28652663 - 28652626
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaactaacaa 142  Q
    |||| |||||||||||||||||||||||||||||||||    
T  28652663 caatctaaccctaatttctataacatcaaaactaacaa 28652626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 24516168 - 24516240
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||    
T  24516168 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaga 24516240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 36734515 - 36734449
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||  ||||||||| ||| ||||||||||||||||| | || ||||||||||||||||||    
T  36734515 catgttaaaccctattttagaattata-aacccattattagagaa-gttaatcccacccttaccttaga 36734449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 2523817 - 2523747
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||    
T  2523817 acaacatgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttacctta 2523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 357885 - 357934
Alignment:
Q  166 agaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  357885 agaatcatacaacttagaattagagaaagttagtcccacccttaccttag 357934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 3539859 - 3539891
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  3539859 attagagaaagttagtcccacccttaccttaga 3539891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 17307508 - 17307540
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  17307508 attagagaaagttagtcccacccttaccttaga 17307540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 22501993 - 22502025
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  22501993 attagagaaagttagtcccacccttaccttaga 22502025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 22509927 - 22509959
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  22509927 attagagaaagttagtcccacccttaccttaga 22509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 25142226 - 25142258
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  25142226 attagagaaagttagtcccacccttaccttaga 25142258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 27852690 - 27852722
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  27852690 attagagaaagttagtcccacccttaccttaga 27852722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29114222 - 29114286
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    |||||||||||| ||||||||||||||| ||| || |||| |||| | ||||||| |||| ||||    
T  29114222 caaatttgatcccaaagtttgtctaaacgtttctaaacatgaaaaaacactcaaatccatataaa 29114286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 127465 - 127341
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||    
T  127465 atcaattttgcaaagtaaccctaatctctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaatccattattagaga 127366  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||||||||    
T  127365 aagctagtcccacccttaccttaga 127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 127825 - 127722
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||||||||| || |||| |||||  |||||||||||| |||| |||| |||||| | |||||||| |||||||||||    
T  127825 caaatttgattccaaaacttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggaccaaatcattattttacaaaatcatcaa 127726  T
Q  100 tttt 103  Q
    ||||    
T  127725 tttt 127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 19789 - 19910
Alignment:
Q  97 caattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaa 193  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  19789 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaa 19887  T
Q  194 gctagtcccacccttaccttaga 216  Q
     ||||||| ||||||||||||||    
T  19888 tctagtcctacccttaccttaga 19910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 5445 - 5508
Alignment:
Q  153 taaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||| |||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttaga 5508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 11603 - 11668
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||||| |||| ||||| |||||||||||| |||||||||  |||||||||||||| ||||    
T  11603 atgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 10881 - 10999
Alignment:
Q  97 caattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaa 193  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||    
T  10881 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaaccc-tttttagaatcatacaacccattattagagaaa 10978  T
Q  194 gctagtcccacccttacctta 214  Q
    |||||| ||||||||||||||    
T  10979 gctagttccacccttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 83; Significance: 2e-39; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 75867 - 75991
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||| ||||||| ||| ||||||||  ||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||| ||||    
T  75867 atcaactttgcaaattatccctaattcttataacatcaaaactaataaaacaacaacatgttaaacccctttttagaatcatacaacccattattggaga 75966  T
Q  192 aagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||||||||    
T  75967 aagctagtcccacccttaccttaga 75991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 73017 - 73139
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 191  Q
    ||||| ||||||| ||||||||||||  |||||||| |||||||| ||||||   |||||||||||||||||||||||||||||||| ||||||||||||    
T  73017 atcaactttgcaaattaaccctaattcttataacataaaaactaataaaacaacaacatgttaaacccctttttagaatcatacaactcattattagaga 73116  T
Q  192 aagctagtcccacccttacctta 214  Q
    ||| |||||||||||||||||||    
T  73117 aagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 111347 - 111414
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  111347 atgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttaga 111414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 66138 - 66070
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||    
T  66138 catgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttaga 66070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 11267 - 11160
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    |||||||||||| |||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11267 taaccctaatttatataacatcaaaactaacaaaacaacaacatgataaacccctttttagaatcatacaacccattattagagaaagctagtcccatcc 11168  T
Q  207 ttacctta 214  Q
    ||||||||    
T  11167 ttacctta 11160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11607 - 11508
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  11607 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 11508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 8854 - 8744
Alignment:
Q  109 ttaaccctaatttctataacatcaaaactaacaaaacaacat---gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 205  Q
    |||||||||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8854 ttaaccctaatttctataacatcaaaactaacaaaacaacaataggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacc 8755  T
Q  206 cttaccttaga 216  Q
    |||||||||||    
T  8754 cttaccttaga 8744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38553 - 38652
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  38553 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 38652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 95142 - 95241
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  95142 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 95241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14125 - 14226
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  14125 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 14224  T
Q  100 tt 101  Q
    ||    
T  14225 tt 14226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5539 - 5438
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  5539 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 5440  T
Q  100 tt 101  Q
    ||    
T  5439 tt 5438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 236 - 135
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  236 caaatttgatcccaaagttcgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 137  T
Q  100 tt 101  Q
    ||    
T  136 tt 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 3528 - 3420
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  3528 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccaccct 3429  T
Q  208 taccttaga 216  Q
    |||||||||    
T  3428 taccttaga 3420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4005 - 3927
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||| | || ||||||||||||||||||| ||||||||  |||||||||||||| ||||  ||||||||||||    
T  4005 caaatttgattccaacgtttgtctaaacatttatacacatcaaataagactcaaaaccatataaaatttgaaccaaaac 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 62297 - 62198
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||||    
T  62297 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattctagaaaatcatcaa 62198  T

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Target: scaffold0032; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 61957 - 61846
Alignment:
Q  110 taaccctaatttc----tataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccac 204  Q
    |||||||||||||    |||||||||||||||||||| ||| ||| | | ||  |||||| ||||| |||||||  |  ||||||||||| ||||| |||    
T  61957 taaccctaatttctatatataacatcaaaactaacaacaactacaaggttaaatccttttcagaattatacaacttagaattagagaaagttagtctcac 61858  T
Q  205 ccttaccttaga 216  Q
    ||||||||||||    
T  61857 ccttaccttaga 61846  T

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Target: scaffold0029 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12021 - 12120
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  12021 caaatttgatctcaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 12120  T

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Target: scaffold0546 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7768 - 7869
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||| ||||||| ||||||||||||||||||||    
T  7768 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaacaaataaaacttgacccaaaacattattttagaaaatcatcaa 7867  T
Q  100 tt 101  Q
    ||    
T  7868 tt 7869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21482 - 21583
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||||    
T  21482 caaatttgattccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattatagaaaatcatcaa 21581  T
Q  100 tt 101  Q
    ||    
T  21582 tt 21583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 1966 - 2074
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  1966 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 2065  T
Q  208 taccttaga 216  Q
    |||||||||    
T  2066 taccttaga 2074  T

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Target: scaffold0005 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 186302 - 186194
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  186302 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 186203  T
Q  208 taccttaga 216  Q
    |||||||||    
T  186202 taccttaga 186194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 6590 - 6503
Alignment:
Q  129 atcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  6590 atcaaaattaacaaaacaacatgttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttaccttaga 6503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18386 - 18287
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaacc-aaaacttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||| ||||| ||||||||||||||    
T  18386 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaaaattattctagaaaatcatcaa 18287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 18046 - 17938
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| || | |||||| || |||| ||||| |||||||  |  ||||||||||| ||||||||||||    
T  18046 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccaccct 17947  T
Q  208 taccttaga 216  Q
    |||||||||    
T  17946 taccttaga 17938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22820 - 22919
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||  ||||||||||||||||||||    
T  22820 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaaattgacccaaaatattattttagaaaatcatcaa 22919  T

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Target: scaffold0063 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39169 - 39070
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||  ||||||||||||||||||||    
T  39169 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaactttacccaaaatattattttagaaaatcatcaa 39070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 62538 - 62612
Alignment:
Q  28 catttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 101  Q
    ||||| ||||||| | |||| |||||||||||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  62538 catttctatacatgataagacactcaaaaccatataaaacttgacccaaaatattattttagaaaatcaccaatt 62612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41131 - 41232
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||| ||    
T  41131 caaatttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcattaa 41230  T
Q  100 tt 101  Q
    ||    
T  41231 tt 41232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 15721 - 15614
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  15721 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtcccaccct 15623  T
Q  208 taccttaga 216  Q
    |||||||||    
T  15622 taccttaga 15614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16198 - 16120
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    |||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||    
T  16198 caaatttgatcccaaagtttgtctgaacatttatacacatcaaatgagactcaaaaccatataaaacttgaaccaaaac 16120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 4064 - 4160
Alignment:
Q  4 atttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4064 atttgatcccagagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6676 - 6775
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||||||||||||||    
T  6676 caaatttgatcccaaagtttgtctaaacatttgtatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcatcaa 6775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13250 - 13151
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  13250 caaatttgatcccaaagtttgtctaaacatttatatacatcaaaagagactagaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 13151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 8859 - 8957
Alignment:
Q  4 atttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 101  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  8859 atttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaaccatttaaaacttgacccaaaagattattttagaaaatcaccaatt 8957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14681 - 14782
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  14681 caaatttgattccaaaatttatctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 14780  T
Q  100 tt 101  Q
    ||    
T  14781 tt 14782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 68797 - 68724
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  68797 aacaacatgttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttaga 68724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 62; Significance: 6e-27; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 134944 - 135045
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  134944 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 135043  T
Q  100 tt 101  Q
    ||    
T  135044 tt 135045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 137413 - 137514
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  137413 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 137512  T
Q  100 tt 101  Q
    ||    
T  137513 tt 137514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 139882 - 139983
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  139882 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 139981  T
Q  100 tt 101  Q
    ||    
T  139982 tt 139983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 142351 - 142452
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  142351 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 142450  T
Q  100 tt 101  Q
    ||    
T  142451 tt 142452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 144820 - 144921
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  144820 caaatttgattccaaaatttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 144919  T
Q  100 tt 101  Q
    ||    
T  144920 tt 144921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 2831 - 2935
Alignment:
Q  114 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 211  Q
    ||||||| |||||||||| |||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2831 cctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacc 2930  T
Q  212 ttaga 216  Q
    |||||    
T  2931 ttaga 2935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 2762 - 2824
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaaa---acaacatgttaaacccctttttagaat 170  Q
    ||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||    
T  2762 aaccctaatttctataacatcaaaagtaacaaaacgacaacatgttaaacccctttttagaat 2824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 18221 - 18328
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||| |||||||| ||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  18221 taaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacaccct 18320  T
Q  208 taccttag 215  Q
    ||||||||    
T  18321 taccttag 18328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 1008 - 1128
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaa-caacatg-ttaaacccctttttagaatcatacaacccattattagagaa 192  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||| | | ||| | |||||||| |||| ||||| |||||| ||||||||||||||    
T  1008 atcaattttgcaatt-aaccataatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaa 1106  T
Q  193 agctagtcccacccttacctta 214  Q
    |||||||| |||||||||||||    
T  1107 agctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 58; Significance: 1e-24; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6209 - 6310
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| ||||||||||| |||| |||    
T  6209 caaatttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgatccaaaacattattttagaatatcaccaa 6308  T
Q  100 tt 101  Q
    ||    
T  6309 tt 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7043 - 6987
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaac 57  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  7043 caaatttgatcccaaagtttgtctaaccatttacatacatcaaaagagactcaaaac 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 6408 - 6472
Alignment:
Q  152 ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||| ||| |||| ||||| | ||||| |||||||||||||||||||||  ||||||||||||||    
T  6408 ttaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttaga 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 17627 - 17519
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||||||||||||| |||||||||||| ||| ||| | |||||||| |||| ||||| |||||| ||||||||||| ||||||||||| |||||    
T  17627 taaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgaccct 17528  T
Q  208 taccttaga 216  Q
    |||||||||    
T  17527 taccttaga 17519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 11876 - 11811
Alignment:
Q  14 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    ||||||||||||||| |||||| |||| |||||  ||||||| |||| |||| ||||||| |||||    
T  11876 aaagtttgtctaaacgtttataaacataaaaaggcactcaaatccatataaaacttgaactaaaac 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5586 - 5488
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||||  |||||| ||||| ||||||||||||||    
T  5586 caaatttgatcccaaagtt-gtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgactcaaaacattattctagaaaatcatcaa 5488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 2562 - 2454
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaaa-acaacatg-ttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacc 205  Q
    |||||||||||||||||||||||||||||| ||  || ||| | |||||||  |||||  ||||| ||||||||||||||||||||||||||||||||||    
T  2562 taaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcccacc 2463  T
Q  206 cttacctta 214  Q
    |||||||||    
T  2462 cttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7880 - 7804
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaa 77  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||| | |||||||||    
T  7880 caaatttgatcccaaagtttgtttaaacatttatatacatcaaaagagattcaaaaccatataaaacatgaaccaaa 7804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 5411 - 5304
Alignment:
Q  110 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 207  Q
    |||||||||| |||||||||||||||| ||||| ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| ||||||||||||    
T  5411 taaccctaatatctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccaccct 5312  T
Q  208 taccttag 215  Q
    ||||||||    
T  5311 taccttag 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 8792 - 8898
Alignment:
Q  114 cctaatttctataacatcaaaactaacaaaacaaca---tgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccaccctta 209  Q
    ||||||||||  || ||||||| |||||||||||||   ||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  8792 cctaatttctcaaaaatcaaaattaacaaaacaacaacatgttaaacccccttttcagaatcatacaatccattattagataaagctagtcccaccctta 8891  T
Q  210 ccttaga 216  Q
     ||||||    
T  8892 acttaga 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 35252 - 35184
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  35252 catgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttaga 35184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 2234 - 2301
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  2234 atgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttaga 2301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 12241 - 12333
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaa---caacatgttaaacccctttttagaatcatacaacccatta 184  Q
    ||||||| | ||| |||||| |||||||||||||||||||||||||||||   ||||||||||||| | ||||||||||||||||||| ||||    
T  12241 atcaattctacaaattaaccttaatttctataacatcaaaactaacaaaacttcaacatgttaaactcatttttagaatcatacaacctatta 12333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 4215 - 4305
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaa 91  Q
    ||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| ||||  |||||||||||| ||||||||||||    
T  4215 aaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaaattgaaccaaaacattattttagaaa 4305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 4877 - 4988
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaactaacaa-aacaacat--gttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 201  Q
    |||| ||||||||||  ||||||||||||||||||||| ||| |||   ||||||||| |||  ||||| |||||||| |||||||||||||||||||||    
T  4877 caatctaaccctaatcactataacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaacc-attattagagaaagctagtcc 4975  T
Q  202 cacccttacctta 214  Q
    |||||||||||||    
T  4976 cacccttacctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 13938 - 14003
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  13938 gttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttaccttaga 14003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 14689 - 14584
Alignment:
Q  114 cctaatttctataa-catcaaaactaacaa-aacaacatgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccacccttac 210  Q
    |||||||||| ||| ||||||||||||||| ||| |||  || || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  14689 cctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttac 14590  T
Q  211 cttaga 216  Q
    ||||||    
T  14589 cttaga 14584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 23747 - 23642
Alignment:
Q  114 cctaatttctataa-catcaaaactaacaa-aacaacatgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccacccttac 210  Q
    |||||||||| ||| ||||||||||||||| ||| |||  || || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  23747 cctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttac 23648  T
Q  211 cttaga 216  Q
    ||||||    
T  23647 cttaga 23642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 23527 - 23587
Alignment:
Q  155 aacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  23527 aacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 40268 - 40159
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatca-taca-acccattattagagaaagctagtcccaccc 206  Q
    |||||||| ||||||||||||||||||| ||| ||| |||| ||||||||| |||||||||| | || | || ||| ||||||||| | |||||||||||    
T  40268 aaccctaacttctataacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccaccc 40169  T
Q  207 ttaccttaga 216  Q
    ||||||||||    
T  40168 ttaccttaga 40159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 5620 - 5685
Alignment:
Q  151 gttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacccttacctta 214  Q
    ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5620 gttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5423 - 5524
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| || |||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  5423 caaatttgattccaaaacttgtctaaccatttctacacatgataagacactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 5522  T
Q  100 tt 101  Q
    ||    
T  5523 tt 5524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 312 - 415
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaa--catttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatc 97  Q
    |||||||||| | ||| ||||||||||  ||| |||||| |||||||||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  312 caaatttgattccaaaatttgtctaaaaacatgtatatagatcaaaagagactcaaaaccatataaaatttgaccaaaaacattattttagaaaatcatc 411  T
Q  98 aatt 101  Q
    ||||    
T  412 aatt 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9975 - 10078
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaa--catttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatc 97  Q
    |||||||||| | ||| ||||||||||  ||| |||||| |||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||    
T  9975 caaatttgattccaaaatttgtctaaaaacatgtatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatc 10074  T
Q  98 aatt 101  Q
    ||||    
T  10075 aatt 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 45; Significance: 8e-17; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 24322 - 24227
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 99  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||   |||||| | |||| ||||| ||||||  || |||||||||||||||||    
T  24322 aaatttgatcgcaaagtttgtctaaacatttatatacatcaaaagaga---aaaaccttataaaacttgacccaaaatattgttttagaaaatcatcaa 24227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 23988 - 23959
Alignment:
Q  110 taaccctaatttctataacatcaaaactaa 139  Q
    ||||||||||||||||||||||||||||||    
T  23988 taaccctaatttctataacatcaaaactaa 23959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 23925 - 23893
Alignment:
Q  181 attattagagaaagctagtcccacccttacctt 213  Q
    |||||||||||||||||||| ||||||||||||    
T  23925 attattagagaaagctagtctcacccttacctt 23893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 26668 - 26781
Alignment:
Q  105 caatttaaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 202  Q
    |||| |||||||||| |||||||||||||| ||||||| ||| |||  ||||||||| |||| ||||| |||||||| |  ||||||||||| || ||||    
T  26668 caatctaaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatccc 26767  T
Q  203 acccttaccttaga 216  Q
    ||||||||| ||||    
T  26768 acccttaccgtaga 26781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 16526 - 16417
Alignment:
Q  110 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 206  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||||||||||| |||| || || |||||    
T  16526 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcaccc 16427  T
Q  207 ttaccttaga 216  Q
    ||||||||||    
T  16426 ttaccttaga 16417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 18754 - 18699
Alignment:
Q  161 tttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||| ||||| ||||||| ||||||||||||||| || ||||||||| ||||||||    
T  18754 ttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttaga 18699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 12417 - 12464
Alignment:
Q  95 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaa 142  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12417 atcaattttgcaaataaaccctaatttctataacatcaaaactaacaa 12464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 18681 - 18638
Alignment:
Q  173 tacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  18681 tacaactcattattagagaaagctagtcccacccttaccttaga 18638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 19154 - 19261
Alignment:
Q  111 aaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 208  Q
    |||||| |||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| |||||||||||||    
T  19154 aacccttatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 19253  T
Q  209 accttaga 216  Q
    || |||||    
T  19254 acgttaga 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 477 - 578
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaacc-aaaacttattttagaaaatcatcaa 99  Q
    |||||||||| | |||| |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| || |||| |||||||||||||||| |||    
T  477 caaatttgattccaaagattgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaaaattattttagaaaatcaccaa 576  T
Q  100 tt 101  Q
    ||    
T  577 tt 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10705 - 10604
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||| |||||||||||| || | ||||| ||||||| |||||||||||||||| |||    
T  10705 caaatttgattccaaaacttgtctaaccatttctatacatgataagacactcaaaaccatatacaacttgacccaaaacattattttagaaaatcaccaa 10606  T
Q  100 tt 101  Q
    ||    
T  10605 tt 10604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 43851 - 43785
Alignment:
Q  148 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  43851 catgttaaaccctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttaga 43785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 39132 - 39093
Alignment:
Q  176 aacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  39132 aacccattattagagaa-gctagtcccacccttaccttaga 39093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19352 - 19447
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 95  Q
    |||||||||| | ||| |||||||||||||||||| |||| |||||  |||||||||||| |||  ||||| ||||||| ||| |||| |||||||    
T  19352 caaatttgattccaaaatttgtctaaacatttataaacatgaaaaggcactcaaaaccatataacacttgacccaaaacattaatttacaaaatca 19447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 372 - 426
Alignment:
Q  149 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 203  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  372 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 21616 - 21665
Alignment:
Q  167 gaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||  |  |||||||||||||||||||||||||||||||||    
T  21616 gaatcatacaacttagaattagagaaagctagtcccacccttaccttaga 21665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10187 - 10086
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 99  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||    
T  10187 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaa 10088  T
Q  100 tt 101  Q
    ||    
T  10087 tt 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 120 - 192
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||    
T  120 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaga 192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 5653 - 5614
Alignment:
Q  176 aacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  5653 aacccattattagagaa-gctagtcccacccttaccttaga 5614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 14892 - 14940
Alignment:
Q  101 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca 149  Q
    ||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  14892 tttgcaattcaaacctaacttctataacatcaaaactaacaaagcaaca 14940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 16912 - 16960
Alignment:
Q  101 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca 149  Q
    ||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  16912 tttgcaattcaaacctaacttctataacatcaaaactaacaaagcaaca 16960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 96380 - 96452
Alignment:
Q  144 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||| ||||||| || |||| ||||||||||||| ||  ||||||||||| |||||||||| |||| |||||    
T  96380 acaacttgttaaatccattttcagaatcatacaactcagaattagagaaagttagtcccacctttactttaga 96452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8614 - 8705
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaa 91  Q
    |||||||||| | |||  |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| ||||||||||||    
T  8614 caaatttgattccaaaacttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaa 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21444 - 21483
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacat 40  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  21444 caaatttgatccaaaagtttgtctaaccatttctatacat 21483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 11347 - 11270
Alignment:
Q  2 aaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 79  Q
    ||||||||||| |  |||||||||||| ||| || ||||  ||||| ||||||| |||| |||| |||||||||||||    
T  11347 aaatttgatcccagggtttgtctaaacgtttctaaacatgtaaagacactcaaatccatataaaacttgaaccaaaac 11270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 2870 - 2943
Alignment:
Q  143 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||| ||||| |  ||| ||||| |||||||| |  ||||||||||| || ||||||||||||||||||    
T  2870 aacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttaga 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 2263 - 2199
Alignment:
Q  151 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 215  Q
    ||||||||| |||| ||||| |||||||  |  ||||||||||  ||||||||||||||||||||    
T  2263 gttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 4739 - 4707
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  4739 attagagaaagttagtcccacccttaccttaga 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11534 - 11470
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||||||| |||||||||||||   |||  |||||||||||| ||||    
T  11534 caaatttgatccaaaaacttgtctaaccatttatatacatgttaaggcactcaaaaccatataaa 11470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 3143 - 3179
Alignment:
Q  102 ttgcaatttaaccctaatttctataacatcaaaacta 138  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  3143 ttgcaatttaaacctaacttctataacatcaaaacta 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 13422 - 13390
Alignment:
Q  184 attagagaaagctagtcccacccttaccttaga 216  Q
    ||||||||||| |||||||||||||||||||||    
T  13422 attagagaaagttagtcccacccttaccttaga 13390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 59769 - 59654
Alignment:
Q  102 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagt 199  Q
    ||||||| ||| |||||||||||||| |||||||||| ||| ||| || | ||||||||| |||| ||||| |||  || ||| |||| |||| | |||     
T  59769 ttgcaatataaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata-tactcatgattaaagaaggttaga 59671  T
Q  200 cccacccttaccttaga 216  Q
    |||||||||||||||||    
T  59670 cccacccttaccttaga 59654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 146524 - 146588
Alignment:
Q  1 caaatttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaa 65  Q
    ||||||||||||||||  |||||||| |||||||||||||   |||  |||||||||||| ||||    
T  146524 caaatttgatccaaaaacttgtctaaccatttatatacatgttaaggcactcaaaaccatataaa 146588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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