View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6988_high_2 (Length: 555)

Name: NF6988_high_2
Description: NF6988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6988_high_2
NF6988_high_2
[»] chr6 (63 HSPs)
chr6 (323-541)||(6327095-6327313)
chr6 (44-243)||(6327391-6327590)
chr6 (323-541)||(6349273-6349502)
chr6 (368-536)||(6334090-6334260)
chr6 (139-203)||(6334324-6334389)
chr6 (56-118)||(7977828-7977890)
chr6 (55-108)||(5970116-5970169)
chr6 (139-231)||(6349562-6349655)
chr6 (160-203)||(6334263-6334306)
chr6 (55-101)||(17435197-17435243)
chr6 (56-101)||(6349752-6349797)
chr6 (56-101)||(12696323-12696368)
chr6 (65-118)||(28715303-28715356)
chr6 (65-118)||(34595142-34595195)
chr6 (56-116)||(16766696-16766756)
chr6 (65-116)||(10770674-10770725)
chr6 (63-110)||(25038077-25038124)
chr6 (56-118)||(426512-426574)
chr6 (65-103)||(1532248-1532286)
chr6 (65-103)||(7569181-7569219)
chr6 (55-108)||(8713977-8714031)
chr6 (66-104)||(16388245-16388283)
chr6 (63-109)||(17341671-17341717)
chr6 (56-118)||(23771578-23771639)
chr6 (330-391)||(6334037-6334098)
chr6 (65-118)||(6898279-6898332)
chr6 (65-118)||(7265591-7265644)
chr6 (65-118)||(12627575-12627628)
chr6 (44-125)||(15489723-15489804)
chr6 (63-115)||(5462692-5462744)
chr6 (65-117)||(7801155-7801207)
chr6 (68-116)||(7973665-7973713)
chr6 (56-116)||(9107370-9107430)
chr6 (65-101)||(31384928-31384964)
chr6 (65-120)||(853855-853910)
chr6 (67-118)||(1700362-1700413)
chr6 (56-115)||(7938115-7938174)
chr6 (65-116)||(9025494-9025545)
chr6 (69-116)||(26562701-26562748)
chr6 (63-102)||(31579239-31579278)
chr6 (65-120)||(32511662-32511717)
chr6 (56-114)||(1191702-1191760)
chr6 (65-111)||(1681766-1681812)
chr6 (65-103)||(7151420-7151458)
chr6 (65-115)||(13851744-13851794)
chr6 (56-118)||(17841587-17841649)
chr6 (65-103)||(19040360-19040398)
chr6 (56-118)||(28152098-28152159)
chr6 (65-118)||(403862-403915)
chr6 (65-110)||(2117084-2117129)
chr6 (60-101)||(4118348-4118389)
chr6 (65-118)||(8776971-8777024)
chr6 (65-110)||(9522899-9522944)
chr6 (65-110)||(16833316-16833361)
chr6 (65-110)||(31959167-31959212)
chr6 (65-118)||(33001287-33001340)
chr6 (65-102)||(34225823-34225860)
chr6 (160-232)||(6326985-6327057)
chr6 (160-232)||(6349163-6349235)
chr6 (56-116)||(8931602-8931662)
chr6 (55-103)||(17168892-17168940)
chr6 (66-110)||(26314640-26314684)
chr6 (65-109)||(33468389-33468433)
[»] scaffold0050 (1 HSPs)
scaffold0050 (50-118)||(70271-70339)
[»] scaffold0027 (1 HSPs)
scaffold0027 (56-116)||(46681-46741)
[»] chr7 (36 HSPs)
chr7 (44-118)||(21880139-21880213)
chr7 (65-115)||(11665441-11665491)
chr7 (56-116)||(13770690-13770750)
chr7 (56-116)||(24339641-24339701)
chr7 (56-115)||(7438705-7438764)
chr7 (57-104)||(8056957-8057003)
chr7 (65-116)||(27945049-27945100)
chr7 (56-118)||(15680808-15680870)
chr7 (65-103)||(18013087-18013125)
chr7 (56-118)||(25481901-25481963)
chr7 (65-110)||(26033467-26033512)
chr7 (65-118)||(28155578-28155631)
chr7 (56-101)||(30813811-30813856)
chr7 (64-116)||(9408334-9408386)
chr7 (63-103)||(27732252-27732292)
chr7 (65-116)||(32094020-32094072)
chr7 (65-116)||(3991332-3991383)
chr7 (65-116)||(5409836-5409887)
chr7 (65-112)||(5954255-5954302)
chr7 (63-102)||(11890933-11890972)
chr7 (65-116)||(19992009-19992060)
chr7 (44-118)||(3721081-3721154)
chr7 (69-99)||(4248223-4248253)
chr7 (56-110)||(24105677-24105731)
chr7 (65-102)||(2424622-2424659)
chr7 (63-116)||(6028631-6028684)
chr7 (65-118)||(8234154-8234207)
chr7 (67-116)||(9778510-9778559)
chr7 (65-118)||(20549799-20549852)
chr7 (65-102)||(29787383-29787420)
chr7 (77-118)||(39138464-39138505)
chr7 (65-110)||(43250001-43250046)
chr7 (65-98)||(44020983-44021016)
chr7 (65-101)||(13300418-13300454)
chr7 (65-116)||(18039006-18039058)
chr7 (65-109)||(35861972-35862016)
[»] chr1 (50 HSPs)
chr1 (62-116)||(6612171-6612225)
chr1 (65-115)||(18190109-18190159)
chr1 (65-116)||(1486709-1486760)
chr1 (65-114)||(8010289-8010338)
chr1 (66-118)||(18337338-18337390)
chr1 (56-120)||(21378577-21378641)
chr1 (56-103)||(1864893-1864940)
chr1 (65-116)||(24577186-24577237)
chr1 (55-118)||(38078659-38078722)
chr1 (64-115)||(40258934-40258985)
chr1 (65-103)||(398778-398816)
chr1 (65-103)||(17754319-17754357)
chr1 (56-101)||(113298-113343)
chr1 (44-109)||(15323150-15323215)
chr1 (59-108)||(16927193-16927242)
chr1 (65-118)||(22515885-22515938)
chr1 (65-118)||(22881614-22881667)
chr1 (63-108)||(28674806-28674851)
chr1 (65-118)||(37598840-37598892)
chr1 (65-118)||(41877468-41877521)
chr1 (65-118)||(42359447-42359500)
chr1 (68-116)||(7353493-7353541)
chr1 (65-116)||(1704992-1705043)
chr1 (65-108)||(23531786-23531829)
chr1 (57-116)||(25272482-25272541)
chr1 (65-116)||(47989505-47989556)
chr1 (65-103)||(5898279-5898317)
chr1 (65-116)||(5944289-5944342)
chr1 (65-103)||(7918224-7918262)
chr1 (56-118)||(19058854-19058916)
chr1 (65-103)||(22794091-22794129)
chr1 (56-118)||(31672893-31672955)
chr1 (65-103)||(34298444-34298482)
chr1 (65-103)||(36878469-36878507)
chr1 (65-103)||(40181879-40181917)
chr1 (56-118)||(46348381-46348443)
chr1 (65-118)||(51410032-51410086)
chr1 (56-101)||(23738677-23738722)
chr1 (65-110)||(31015051-31015096)
chr1 (67-116)||(44482240-44482289)
chr1 (65-110)||(48450593-48450638)
chr1 (64-100)||(9449024-9449060)
chr1 (56-100)||(12443476-12443520)
chr1 (63-103)||(13997889-13997929)
chr1 (67-103)||(19324572-19324608)
chr1 (67-103)||(25098568-25098604)
chr1 (67-103)||(25361896-25361932)
chr1 (55-116)||(31694710-31694773)
chr1 (55-103)||(33230723-33230771)
chr1 (65-101)||(37055871-37055907)
[»] chr5 (44 HSPs)
chr5 (65-118)||(21576743-21576796)
chr5 (56-116)||(41633734-41633794)
chr5 (56-118)||(8420026-8420088)
chr5 (56-118)||(21191054-21191116)
chr5 (65-118)||(6247630-6247683)
chr5 (44-101)||(43001787-43001844)
chr5 (44-116)||(13287399-13287471)
chr5 (56-116)||(31084322-31084382)
chr5 (65-116)||(40131629-40131680)
chr5 (65-118)||(2548395-2548448)
chr5 (56-116)||(19552545-19552603)
chr5 (57-114)||(23015991-23016048)
chr5 (65-110)||(24906307-24906352)
chr5 (65-106)||(27932243-27932284)
chr5 (65-118)||(28588672-28588725)
chr5 (56-116)||(7677704-7677764)
chr5 (56-116)||(21522749-21522809)
chr5 (56-116)||(21533315-21533375)
chr5 (56-104)||(22013413-22013461)
chr5 (65-101)||(39698549-39698585)
chr5 (63-110)||(30098332-30098379)
chr5 (65-116)||(36838551-36838602)
chr5 (65-116)||(41091257-41091308)
chr5 (56-115)||(42893359-42893418)
chr5 (67-118)||(43564891-43564942)
chr5 (65-99)||(4344750-4344784)
chr5 (65-103)||(5467991-5468029)
chr5 (65-103)||(6471902-6471940)
chr5 (76-118)||(14422921-14422963)
chr5 (56-110)||(14674268-14674322)
chr5 (57-103)||(24273043-24273089)
chr5 (57-103)||(24389125-24389171)
chr5 (68-110)||(30136680-30136722)
chr5 (65-103)||(38749576-38749614)
chr5 (68-101)||(6326312-6326345)
chr5 (55-100)||(12641672-12641717)
chr5 (44-101)||(16374357-16374414)
chr5 (65-110)||(25863212-25863257)
chr5 (65-118)||(30502386-30502439)
chr5 (65-118)||(30542729-30542782)
chr5 (65-110)||(31264446-31264491)
chr5 (55-103)||(10022630-10022678)
chr5 (58-98)||(12280453-12280493)
chr5 (64-96)||(40000555-40000587)
[»] chr4 (37 HSPs)
chr4 (65-118)||(8423716-8423769)
chr4 (65-118)||(54580021-54580074)
chr4 (55-115)||(47263984-47264044)
chr4 (56-118)||(2361973-2362035)
chr4 (56-118)||(21945502-21945564)
chr4 (50-116)||(38148725-38148791)
chr4 (57-118)||(28964246-28964307)
chr4 (56-118)||(23292984-23293046)
chr4 (65-103)||(24343515-24343553)
chr4 (65-118)||(12895272-12895325)
chr4 (65-110)||(29205452-29205497)
chr4 (63-103)||(903928-903968)
chr4 (65-101)||(11596367-11596403)
chr4 (63-103)||(22440613-22440653)
chr4 (65-101)||(51701266-51701302)
chr4 (63-114)||(1213223-1213273)
chr4 (65-116)||(32273526-32273577)
chr4 (64-103)||(40179649-40179688)
chr4 (56-118)||(49431024-49431087)
chr4 (64-110)||(6485617-6485663)
chr4 (63-109)||(14126118-14126164)
chr4 (65-103)||(15029773-15029811)
chr4 (57-103)||(19230322-19230368)
chr4 (65-115)||(35157986-35158036)
chr4 (65-103)||(36635332-36635370)
chr4 (65-103)||(37698720-37698758)
chr4 (56-101)||(3947781-3947826)
chr4 (65-118)||(12797336-12797388)
chr4 (57-102)||(24999044-24999089)
chr4 (56-116)||(30298945-30299006)
chr4 (56-116)||(30327813-30327874)
chr4 (65-102)||(32910559-32910596)
chr4 (65-109)||(4383376-4383419)
chr4 (56-120)||(4672081-4672145)
chr4 (65-101)||(14465090-14465126)
chr4 (65-101)||(37203272-37203308)
chr4 (56-120)||(38847008-38847072)
[»] chr3 (44 HSPs)
chr3 (56-116)||(28918000-28918060)
chr3 (65-118)||(7928458-7928511)
chr3 (56-116)||(15796294-15796354)
chr3 (65-120)||(18426957-18427012)
chr3 (65-104)||(25948899-25948938)
chr3 (63-108)||(4201402-4201447)
chr3 (56-101)||(4987306-4987351)
chr3 (65-118)||(8383265-8383318)
chr3 (68-125)||(8587012-8587069)
chr3 (56-101)||(10268501-10268546)
chr3 (65-118)||(10954960-10955013)
chr3 (63-116)||(16192750-16192803)
chr3 (65-110)||(26508118-26508163)
chr3 (65-114)||(29508452-29508501)
chr3 (65-118)||(51206351-51206404)
chr3 (65-118)||(55401083-55401136)
chr3 (56-116)||(7614415-7614475)
chr3 (56-100)||(14979180-14979224)
chr3 (60-104)||(16789015-16789059)
chr3 (66-110)||(20503474-20503518)
chr3 (65-101)||(34910325-34910361)
chr3 (65-116)||(1509547-1509598)
chr3 (55-98)||(3164043-3164086)
chr3 (65-116)||(8039835-8039886)
chr3 (65-116)||(9800048-9800099)
chr3 (64-118)||(25775515-25775570)
chr3 (65-116)||(49651786-49651837)
chr3 (65-110)||(4990973-4991018)
chr3 (65-102)||(11251986-11252023)
chr3 (65-118)||(16000014-16000067)
chr3 (65-110)||(17005625-17005670)
chr3 (65-118)||(21149075-21149128)
chr3 (65-102)||(21211296-21211333)
chr3 (65-110)||(21256992-21257037)
chr3 (56-101)||(21479117-21479162)
chr3 (65-110)||(24205047-24205092)
chr3 (65-110)||(34307786-34307831)
chr3 (65-97)||(11155032-11155064)
chr3 (65-101)||(14209121-14209157)
chr3 (64-104)||(14840303-14840343)
chr3 (68-120)||(27097056-27097107)
chr3 (63-103)||(32804553-32804593)
chr3 (65-117)||(38731226-38731278)
chr3 (69-109)||(39002044-39002084)
[»] chr2 (37 HSPs)
chr2 (56-116)||(12668423-12668483)
chr2 (56-116)||(30717530-30717590)
chr2 (63-106)||(23921259-23921302)
chr2 (64-118)||(15972880-15972934)
chr2 (56-101)||(21374714-21374759)
chr2 (65-116)||(15657872-15657923)
chr2 (65-116)||(30335425-30335476)
chr2 (63-110)||(30404856-30404903)
chr2 (65-116)||(36756344-36756395)
chr2 (64-103)||(40361767-40361806)
chr2 (65-111)||(12940940-12940986)
chr2 (65-115)||(18841014-18841064)
chr2 (65-103)||(28677917-28677955)
chr2 (65-115)||(42832277-42832327)
chr2 (65-118)||(2438717-2438770)
chr2 (65-101)||(39323272-39323308)
chr2 (62-101)||(1886893-1886932)
chr2 (65-116)||(4882696-4882747)
chr2 (63-102)||(28412356-28412395)
chr2 (57-104)||(29176505-29176552)
chr2 (65-116)||(37411244-37411295)
chr2 (65-115)||(11223864-11223914)
chr2 (65-118)||(19536395-19536449)
chr2 (65-103)||(21616770-21616808)
chr2 (65-118)||(5367200-5367253)
chr2 (65-110)||(10535765-10535810)
chr2 (65-118)||(20473330-20473383)
chr2 (55-116)||(20539674-20539735)
chr2 (65-102)||(21782832-21782869)
chr2 (44-104)||(29663996-29664057)
chr2 (65-118)||(34691803-34691856)
chr2 (65-118)||(34714215-34714268)
chr2 (67-99)||(11308021-11308053)
chr2 (71-103)||(15909645-15909677)
chr2 (64-116)||(18421970-18422022)
chr2 (63-103)||(35449519-35449559)
chr2 (63-103)||(41942111-41942151)
[»] chr8 (40 HSPs)
chr8 (64-118)||(18170480-18170534)
chr8 (64-118)||(18634048-18634102)
chr8 (56-118)||(20873068-20873130)
chr8 (65-118)||(4948660-4948713)
chr8 (56-125)||(8342971-8343040)
chr8 (65-118)||(34897093-34897146)
chr8 (65-120)||(7658471-7658526)
chr8 (65-116)||(15816129-15816180)
chr8 (65-116)||(25566849-25566900)
chr8 (65-103)||(13203649-13203687)
chr8 (65-115)||(14134707-14134757)
chr8 (56-98)||(41831958-41832000)
chr8 (56-101)||(8343315-8343360)
chr8 (63-116)||(11927086-11927139)
chr8 (63-116)||(24669439-24669492)
chr8 (64-120)||(4786334-4786390)
chr8 (65-116)||(2572056-2572107)
chr8 (56-115)||(4298887-4298946)
chr8 (63-98)||(28642414-28642449)
chr8 (65-116)||(28745506-28745557)
chr8 (65-120)||(30077383-30077438)
chr8 (63-118)||(31580125-31580180)
chr8 (65-103)||(3025559-3025597)
chr8 (65-103)||(4611542-4611580)
chr8 (65-115)||(20679396-20679446)
chr8 (56-118)||(22595993-22596055)
chr8 (56-110)||(25192353-25192407)
chr8 (63-116)||(11944671-11944724)
chr8 (65-118)||(12985400-12985453)
chr8 (65-118)||(13844594-13844647)
chr8 (65-118)||(18646180-18646233)
chr8 (56-101)||(31556996-31557040)
chr8 (65-118)||(36450752-36450805)
chr8 (65-110)||(44067524-44067569)
chr8 (50-103)||(2542441-2542496)
chr8 (65-101)||(7442853-7442889)
chr8 (63-103)||(11803265-11803305)
chr8 (56-116)||(22651975-22652035)
chr8 (63-110)||(25886999-25887047)
chr8 (66-110)||(40332200-40332244)
[»] scaffold0022 (1 HSPs)
scaffold0022 (64-115)||(90850-90901)
[»] scaffold1528 (1 HSPs)
scaffold1528 (65-103)||(1043-1081)
[»] scaffold0021 (1 HSPs)
scaffold0021 (56-110)||(130481-130535)
[»] scaffold0652 (1 HSPs)
scaffold0652 (65-118)||(460-513)
[»] scaffold0223 (1 HSPs)
scaffold0223 (56-101)||(20171-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (56-101)||(51810-51855)
[»] scaffold0066 (1 HSPs)
scaffold0066 (56-101)||(33378-33423)
[»] scaffold0361 (1 HSPs)
scaffold0361 (65-101)||(14538-14574)
[»] scaffold0126 (1 HSPs)
scaffold0126 (56-116)||(19144-19203)
[»] scaffold0044 (1 HSPs)
scaffold0044 (66-110)||(53189-53233)
[»] scaffold0004 (2 HSPs)
scaffold0004 (65-101)||(92815-92851)
scaffold0004 (69-116)||(83172-83219)
[»] scaffold0722 (1 HSPs)
scaffold0722 (55-118)||(7030-7093)
[»] scaffold0122 (1 HSPs)
scaffold0122 (60-114)||(7522-7577)
[»] scaffold0025 (1 HSPs)
scaffold0025 (62-116)||(23774-23829)
[»] scaffold0136 (1 HSPs)
scaffold0136 (63-101)||(3864-3902)
[»] scaffold0049 (1 HSPs)
scaffold0049 (65-115)||(63781-63831)
[»] scaffold0018 (1 HSPs)
scaffold0018 (63-101)||(192264-192302)
[»] scaffold0011 (1 HSPs)
scaffold0011 (65-115)||(17750-17800)
[»] scaffold0236 (1 HSPs)
scaffold0236 (63-116)||(25768-25821)
[»] scaffold0171 (1 HSPs)
scaffold0171 (75-116)||(23438-23479)
[»] scaffold0008 (1 HSPs)
scaffold0008 (65-109)||(263379-263423)
[»] scaffold0003 (1 HSPs)
scaffold0003 (56-116)||(241593-241653)


Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 323 - 541
Target Start/End: Complemental strand, 6327313 - 6327095
Alignment:
Q  323 ggtccctcacctagttgaagttcaatgtggttggcattgtgtcttaaaaattggaaagtagtgtttagaggttattgttactattgtagacaaaatggtt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6327313 ggtccctcacctagttgaagttcaatgtggttggcattgtgtcttaaaaattggaaagtagtgtttagaggttattgttactattgtagacaaaatggtt 6327214  T
Q  423 taagtactagtttgaattttttccatttctaacaagagttttcattatttcatttccatcataatgtttgtattcatatattatctataatgttggtccc 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6327213 taagtactagtttgaattttttccatttctaacaagagttttcattatttcatttccatcataatgtttgtattcatatattatctataatgttggtccc 6327114  T
Q  523 actctcacctagctgatgt 541  Q
    |||||||||||||||||||    
T  6327113 actctcacctagctgatgt 6327095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 44 - 243
Target Start/End: Complemental strand, 6327590 - 6327391
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggatatgtgttagtgcttcattggtcat 143  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  6327590 acacttacattttgacatagttaataatttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcggatacgtgttagtgcttcattggtcat 6327491  T
Q  144 atattattggcatatggtgtttataaatttgagtttggtatttttggataaagggttaactagtagattggattttcaccatttctaaccataggtttaa 243  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6327490 atattgttggcatatggtgtttataaacttgagtttggtatttttggataaaggtttaactagtagattggattttcaccatttctaaccataggtttaa 6327391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 323 - 541
Target Start/End: Complemental strand, 6349502 - 6349273
Alignment:
Q  323 ggtccctcacctagttgaagttcaatgtggttggcattgtgtcttaaaaattggaaagtagtgtttagaggttattgttactattgtagacaaaatggtt 422  Q
    |||||| |||| ||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  6349502 ggtcccccaccaagttgaagtacaatgtggttggcattctgtcatcaaaattggaaagtagtgtttagagtttattgttactgatttagacaaaatggtt 6349403  T
Q  423 taagtactagtttgaattttttccatttctaacaagagttttcattatttcatttccatcat-aatgtttgtattcatatat----------tatctata 511  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||          ||| ||||    
T  6349402 taagtactagtttgaatttttaccatttctaacaagaattttcattatttcatttccatcataaatgtttgtattcatatattacatatatatatatata 6349303  T
Q  512 atgttggtcccactctcacctagctgatgt 541  Q
    || |||||||||||||||||||||||||||    
T  6349302 atcttggtcccactctcacctagctgatgt 6349273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 368 - 536
Target Start/End: Complemental strand, 6334260 - 6334090
Alignment:
Q  368 aaaaattggaaagtagtgtttaga--ggttattgttactattgtagacaaaatggtttaagtactagtttgaattttttccatttctaacaagagttttc 465  Q
    ||||||||| ||| ||||||||||  ||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6334260 aaaaattgggaagcagtgtttagatcggttaatgttactgttttagacaaaatggtttaagtactagtttgaatttttaccatttctaacaagagttttc 6334161  T
Q  466 attatttcatttccatcataatgtttgtattcata-tattatctataatgttggtcccactctcacctagct 536  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||    
T  6334160 attatttcatttccatcataatgtttgtattaatattattatatataatgtt-gtcccactcccacctagct 6334090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 6334389 - 6334324
Alignment:
Q  139 gtcatatattattggcatat-ggtgtttataaatttgagtttggtatttttggataaagggttaac 203  Q
    |||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  6334389 gtcatatattgttggcatctaggtgtttagaaatttgagtttggtatttttggataaagggttaac 6334324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 7977890 - 7977828
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  7977890 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgga 7977828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 5970169 - 5970116
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgt 108  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  5970169 tcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgt 5970116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 6349655 - 6349562
Alignment:
Q  139 gtcatatattattggcatatggtgtttataaatttgagtttggtatttttggataaagggttaactagtaga-ttggattttcaccatttctaa 231  Q
    |||||||||| ||||||| | ||||||| |||||| ||||||||||||||||| |||||||| |  | || | |||||||||||||||||||||    
T  6349655 gtcatatattgttggcatctagtgtttagaaatttaagtttggtatttttggacaaagggttgataactaaatttggattttcaccatttctaa 6349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 6334306 - 6334263
Alignment:
Q  160 gtgtttataaatttgagtttggtatttttggataaagggttaac 203  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  6334306 gtgtttagaaatttgagtttggtatttttggataaagggttaac 6334263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 17435197 - 17435243
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  17435197 tcgacatagctaataattttaaaaaattacataattcagtgtaatta 17435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 6349797 - 6349752
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  6349797 cgacataattaataatttgaaaaaattacataattcattgtaatta 6349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 12696323 - 12696368
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  12696323 cgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 28715303 - 28715356
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  28715303 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgga 28715356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 34595142 - 34595195
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 34595195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 16766696 - 16766756
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| || ||||| |||||    
T  16766696 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 10770725 - 10770674
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||    
T  10770725 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 25038124 - 25038077
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  25038124 gttaataatttgagaaaattacataatttagtgtaattacaaatgtcg 25038077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 426574 - 426512
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| |||||||||||||||||||| |||||||| | |||||||| || ||||| |||||||    
T  426574 cgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcgga 426512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 1532248 - 1532286
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  1532248 taataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 7569219 - 7569181
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 8713977 - 8714031
Alignment:
Q  55 tcgacatagttaataatttgaaaaaatt-acataattcagtgtaattataaatgt 108  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  8713977 tcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgt 8714031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 16388283 - 16388245
Alignment:
Q  66 aataatttgaaaaaattacataattcagtgtaattataa 104  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 17341717 - 17341671
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  17341717 gttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 23771578 - 23771639
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| |||||||||||| ||||||||| ||| ||||||||||||| |||||||| |||||||    
T  23771578 cgacacagttaataattt-aaaaaattatatacttcagtgtaattacaaatgtcggtgtcgga 23771639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 6334098 - 6334037
Alignment:
Q  330 cacctagttgaagttcaatgtggttggcattgtgtcttaaaaattggaaagtagtgtttaga 391  Q
    ||||||| | |||| ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  6334098 cacctagcttaagtacaatgtggttggcattgtaacataaaaattggaaactagtgtttaga 6334037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 6898332 - 6898279
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||||| ||||||||||||| |||||||||| || ||||| |||||||    
T  6898332 taataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcgga 6898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 7265644 - 7265591
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||| |||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 7265591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 12627628 - 12627575
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||| ||||||||| ||||||||||||||||| |||  |||||||||||||    
T  12627628 taataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcgga 12627575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 15489804 - 15489723
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggatatgtgt 125  Q
    |||||||||  |||||| |  ||||||||||||||||||||| |||||| |||||||| || ||||| |||| ||| |||||    
T  15489804 acactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtctgatctgtgt 15489723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 5462692 - 5462744
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||||| ||||| |||||||||| |||||||||| |||| ||||||    
T  5462692 gttaataatttgagaaaatcacataattcattgtaattatatatgttgatgtc 5462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 7801207 - 7801155
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgg 117  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||| ||||||    
T  7801207 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 7801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 7973665 - 7973713
Alignment:
Q  68 taatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||| |||||||||||||||| ||||||||||||| ||||| |||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcggtgtcg 7973713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 9107430 - 9107370
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  9107430 cgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 31384928 - 31384964
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||||||||||||||    
T  31384928 taataatttgaaaaaatcacataattcagtgtaatta 31384964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 853910 - 853855
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||||||||||||||| |||||||| |||| ||||| || ||||| |||||||||    
T  853910 taataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcggata 853855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 1700362 - 1700413
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||| ||||||| ||||| |||||||||||||||| ||||| |||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcgga 1700413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 7938115 - 7938174
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||| || ||||||||||||||||| | |||||| ||||||||||||| ||||| ||||    
T  7938115 cgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 9025545 - 9025494
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||| |||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 26562701 - 26562748
Alignment:
Q  69 aatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||| ||||| |||||||||||||||||||||  |||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 31579278 - 31579239
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  31579278 gttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 32511717 - 32511662
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||||||| | ||||| |||||||||||||||||||||| ||| | |||||||||    
T  32511717 taataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcggata 32511662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 1191760 - 1191702
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgt 114  Q
    ||||| || ||||||||||||||| | ||| ||||||||||||||| || |||||||||    
T  1191760 cgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgt 1191702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 1681766 - 1681812
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcga 111  Q
    ||||||||||||||||| || |||||||||||||||| || ||||||    
T  1681766 taataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcga 1681812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 7151420 - 7151458
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattata 7151458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 13851744 - 13851794
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||| ||||| || ||||||||||||||||||  ||||||||||    
T  13851744 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 13851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17841649 - 17841587
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| |||||||| |||||||||| || || || |||||||    
T  17841649 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcgga 17841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 19040360 - 19040398
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattata 19040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 28152098 - 28152159
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||| | ||||||||||||||||||| || ||||| |||||||    
T  28152098 cgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcgga 28152159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 403915 - 403862
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||| ||||||| || || ||||| |||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcgga 403862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 2117084 - 2117129
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| |||||||||| || |||||||| |||||    
T  2117084 taataatttgaaaaaatcacataattcaatgcaattataagtgtcg 2117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 4118389 - 4118348
Alignment:
Q  60 atagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||||||||||||||||||| |||||||| | ||||||||    
T  4118389 atagttaataatttgaaaaaatcacataattaaatgtaatta 4118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 8777024 - 8776971
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||| ||||||||||||||| || ||| | |||||||    
T  8777024 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcgga 8776971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 9522899 - 9522944
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||| ||||||| ||||||||||||||||||| || |||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 16833316 - 16833361
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| ||||| ||||||||||||| || |||||    
T  16833316 taataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 31959167 - 31959212
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| ||||||| ||||||||||| || |||||    
T  31959167 taataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 33001340 - 33001287
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||| | ||||||||||  ||||| |||||||    
T  33001340 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcgga 33001287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 34225860 - 34225823
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    |||||||||||||||||  |||||||||||||||||||    
T  34225860 taataatttgaaaaaatcgcataattcagtgtaattat 34225823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 6327057 - 6326985
Alignment:
Q  160 gtgtttataaatttgagtttggtatttttggataaagggttaactagtagattggattttcaccatttctaac 232  Q
    ||||||| |||||||| ||||||||||| |   |||| ||| | |||||| ||||||||| ||||||||||||    
T  6327057 gtgtttagaaatttgattttggtattttggacaaaagtgttcattagtagtttggatttttaccatttctaac 6326985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 6349235 - 6349163
Alignment:
Q  160 gtgtttataaatttgagtttggtatttttggataaagggttaactagtagattggattttcaccatttctaac 232  Q
    ||||||| |||||||| | ||||||||| |   |||||||| | |||||| ||||||||| ||||||||||||    
T  6349235 gtgtttagaaatttgattgtggtattttggacaaaagggttcattagtagtttggatttttaccatttctaac 6349163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 8931662 - 8931602
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||| ||||||| ||||| |||||||||||| ||||||||  |||||||||||    
T  8931662 cgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcg 8931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 17168892 - 17168940
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||| | ||||||||||||||||| |||||||||| ||||| ||||    
T  17168892 tcgacattgataataatttgaaaaaatgacataattcaatgtaactata 17168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 26314684 - 26314640
Alignment:
Q  66 aataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    |||||||||||||||| | |||||||| |||||||||| ||||||    
T  26314684 aataatttgaaaaaatcatataattcaatgtaattatatatgtcg 26314640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 33468433 - 33468389
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||||||||| || ||||||| |||||||||| |||||    
T  33468433 taataatttgaaaaaataacttaattcaatgtaattatatatgtc 33468389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 70271 - 70339
Alignment:
Q  50 acatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  70271 acatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcgga 70339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 46681 - 46741
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  46681 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 21880139 - 21880213
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||| | ||||| | ||||||||||| ||||||||||||||||||||||||| || ||||| |||||||    
T  21880139 acactaacatgtggacatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgga 21880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 11665491 - 11665441
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  11665491 taataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 13770690 - 13770750
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| || ||||| |||||    
T  13770690 cgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcg 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 24339641 - 24339701
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| || ||||| |||||    
T  24339641 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 7438705 - 7438764
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||| || ||||| ||||    
T  7438705 cgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 8057003 - 8056957
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattataa 104  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  8057003 gacacagttaataattt-aaaaaattacataattcagtgtaattataa 8056957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 27945049 - 27945100
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||| |||||    
T  27945049 taataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 15680808 - 15680870
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||| ||||||||  ||||||| |||||||| ||||||||||||| ||||| |||||||    
T  15680808 cgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 15680870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 18013125 - 18013087
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  18013125 taataatttaaaaaaattacataattcagtgtaattata 18013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 25481901 - 25481963
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| || ||| | |||||||    
T  25481901 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcgga 25481963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 26033512 - 26033467
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||    
T  26033512 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 28155578 - 28155631
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||||||||||||| ||||||||| || ||||| |||||||    
T  28155578 taataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcgga 28155631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 30813811 - 30813856
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||    
T  30813811 cgacattgctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 9408386 - 9408334
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||||||||| |||||||| |||||||||| || ||||| |||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 27732292 - 27732252
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  27732292 gttaataatttaagaaaattacataattcagtgtaattata 27732252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 32094072 - 32094020
Alignment:
Q  65 taataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||| |||||    
T  32094072 taataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 3991332 - 3991383
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||||||| |||||| || ||||| |||||    
T  3991332 taataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 3991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 5409887 - 5409836
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| ||||||||||||| ||||| || ||||| |||||    
T  5409887 taataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 5954255 - 5954302
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgat 112  Q
    |||||||||||||||||||||||||  |||||||||| |||| |||||    
T  5954255 taataatttgaaaaaattacataatctagtgtaattacaaatatcgat 5954302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 11890972 - 11890933
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  11890972 gttaataatttgaaaaaatcatataattcagtgtaattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 19992009 - 19992060
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| ||||| ||||| |||||||||||||||| ||||| |||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 3721081 - 3721154
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| |||||||||||| | ||||||||||| ||||| |||||||| ||| ||||||||  ||||| |||||||    
T  3721081 acactgacatttcgacat-gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcgga 3721154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 99
Target Start/End: Original strand, 4248223 - 4248253
Alignment:
Q  69 aatttgaaaaaattacataattcagtgtaat 99  Q
    |||||||||||||||||||||||||||||||    
T  4248223 aatttgaaaaaattacataattcagtgtaat 4248253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 24105677 - 24105731
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||| || |||||||||||||||||| ||| |||||||||||||| || |||||    
T  24105677 cgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 6028631 - 6028684
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||||||| || |||||||| | |||||||| |||||||| |||||    
T  6028631 gttaataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcg 6028684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 8234154 - 8234207
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||| ||| || || || |||||||    
T  8234154 taataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcgga 8234207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 9778510 - 9778559
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||| |||||||||||| |||||| || ||||| |||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 20549799 - 20549852
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| || ||||||||||||||||||  ||||| |||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcgga 20549852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 29787420 - 29787383
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  29787420 taataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 39138464 - 39138505
Alignment:
Q  77 aaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| ||||||||||||||||||||| |||||| |||||||    
T  39138464 aaaatcacataattcagtgtaattatatatgtcggtgtcgga 39138505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 43250001 - 43250046
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  43250001 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 44020983 - 44021016
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaa 98  Q
    |||||||||||||||||||||||||||| |||||    
T  44020983 taataatttgaaaaaattacataattcaatgtaa 44021016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 13300418 - 13300454
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| | |||||||||||||||||    
T  13300418 taataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 18039006 - 18039058
Alignment:
Q  65 taataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||||||| | ||||||||||||||||||| || ||||| |||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 35861972 - 35862016
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  35861972 taataatttgaaaaaatcacataattcaatgtaattgtaagtgtc 35862016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 6612225 - 6612171
Alignment:
Q  62 agttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  6612225 agttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 18190159 - 18190109
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 1486760 - 1486709
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 8010338 - 8010289
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgt 114  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  8010338 taataatttgaaaaaattatataattcagtataattataagtgtcgatgt 8010289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 18337338 - 18337390
Alignment:
Q  66 aataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 18337390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 21378577 - 21378641
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||| || |||||| |||||||||||||||||||||||||||||| || ||||| ||| |||||    
T  21378577 cgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgttggata 21378641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 1864940 - 1864893
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  1864940 cgacacagttaataatttgagaaaatcacataattcagtgtaattata 1864893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 24577237 - 24577186
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||    
T  24577237 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 38078722 - 38078659
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||| || ||||||||||||||||| |||||||||| |||||||| || ||||| |||||||    
T  38078722 tcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgga 38078659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 40258985 - 40258934
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||| ||||    
T  40258985 ttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 398816 - 398778
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  398816 taataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 17754319 - 17754357
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  17754319 taataatttgaaaaaattacataattcagtgtaactata 17754357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 113298 - 113343
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||    
T  113298 cgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 15323150 - 15323215
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||| |||| |||| | |||||||||||||||||||| |||||||| ||||||||| ||| ||||    
T  15323150 acactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 16927242 - 16927193
Alignment:
Q  59 catagttaataatttgaaaaaattacataattcagtgtaattataaatgt 108  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||| ||||    
T  16927242 catagctaataatttgaaaaaatcatataattcagtgtaattatatatgt 16927193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 22515938 - 22515885
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||| |||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgga 22515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 22881667 - 22881614
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||| |||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgga 22881614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 28674806 - 28674851
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgt 108  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||    
T  28674806 gttaataatttgagaaaattacataattcagtataattatatatgt 28674851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 37598840 - 37598892
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||    
T  37598840 taataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcgga 37598892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 41877521 - 41877468
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| |||||||||||||| |||||||||| || ||||| |||||||    
T  41877521 taataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcgga 41877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 42359500 - 42359447
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  42359500 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgga 42359447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 7353541 - 7353493
Alignment:
Q  68 taatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| ||||||||||||||||| |||||||||||| |||||| |||||    
T  7353541 taattcgaaaaaattacataatttagtgtaattatatatgtcggtgtcg 7353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 1705043 - 1704992
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||| |||||    
T  1705043 taataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 23531829 - 23531786
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgt 108  Q
    |||||||||||||| || |||||||||| |||||||||||||||    
T  23531829 taataatttgaaaatatcacataattcaatgtaattataaatgt 23531786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 25272482 - 25272541
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||| |||||| ||||||| ||||| |||||||| ||||||||||||| ||||| |||||    
T  25272482 gacacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 47989505 - 47989556
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||| ||||||| ||||||||||||||||||| || ||||| |||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 5898317 - 5898279
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  5898317 taataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 5944289 - 5944342
Alignment:
Q  65 taataatttgaaaaaa--ttacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||  | |||||||||||||||||||||| ||||| |||||    
T  5944289 taataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 7918262 - 7918224
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattata 7918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 19058916 - 19058854
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||| |||| || ||||||||||||||||||| || ||||| |||||||    
T  19058916 cgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgga 19058854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 22794129 - 22794091
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  22794129 taataatttgaaaaaatgacataatacagtgtaattata 22794091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 31672955 - 31672893
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| || |||||||||||||||| || | ||| |||||||    
T  31672955 cgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcgga 31672893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 36878469 - 36878507
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 40181879 - 40181917
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 46348443 - 46348381
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| | |||||| |||||||||| || ||||| |||||||    
T  46348443 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgga 46348381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 51410032 - 51410086
Alignment:
Q  65 taataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||||||||| | ||||||||||||||||||| || ||||| |||||||    
T  51410032 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 51410086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 23738677 - 23738722
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| ||||||||||||| |||||    
T  23738677 cgacacagctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 31015051 - 31015096
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||||||||||||||||| || |||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 44482240 - 44482289
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||| ||||| |||||||||||||||||||||  ||||| |||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 48450638 - 48450593
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| |||||||| |||||||||| || |||||    
T  48450638 taataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 9449060 - 9449024
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaatt 100  Q
    |||||||||||||||||| |||||||||||| |||||    
T  9449060 ttaataatttgaaaaaatcacataattcagtataatt 9449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 12443520 - 12443476
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatt 100  Q
    ||||| || ||||||||||| ||||| ||||||||||||||||||    
T  12443520 cgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 13997889 - 13997929
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  13997889 gttaattatttaaaaaaatcacataattcagtgtaattata 13997929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 19324572 - 19324608
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 25098604 - 25098568
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattata 25098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 25361896 - 25361932
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattata 25361932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 31694773 - 31694710
Alignment:
Q  55 tcgacatagttaataatttgaaaaaa--ttacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||| ||||||||||||||||  | |||||||||||| |||||| || ||||| |||||    
T  31694773 tcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 33230723 - 33230771
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||| ||||||||||||||||| |||||||||| | ||||| ||||    
T  33230723 tcgacatcgttaataatttgaaaaatttacataatttaatgtaaatata 33230771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 37055907 - 37055871
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  37055907 taataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 21576796 - 21576743
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  21576796 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgga 21576743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 41633734 - 41633794
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  41633734 cgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcg 41633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 8420026 - 8420088
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||| || ||||| |||||||    
T  8420026 cgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcgga 8420088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 21191116 - 21191054
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  21191116 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 21191054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 6247630 - 6247683
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  6247630 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 6247683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 43001787 - 43001844
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||    
T  43001787 acactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 13287471 - 13287399
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||  |||||| || ||||||||||||||||| |||||||||||||||| || || ||||| |||||    
T  13287471 acactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcg 13287399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 31084322 - 31084382
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| |||||||||| |||||||| || |||||||||||    
T  31084322 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 40131629 - 40131680
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||| |||||    
T  40131629 taataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcg 40131680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 2548395 - 2548448
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||| || ||||||||||||||||||||||| |||| ||||| |||||||    
T  2548395 taataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcgga 2548448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 19552603 - 19552545
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  ||||| |||||||||||    
T  19552603 cgacacagttaataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcg 19552545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 23016048 - 23015991
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgt 114  Q
    ||||| |||||| |||||| ||||| |||||||||||||||||||||  |||||||||    
T  23016048 gacatcgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgt 23015991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 24906352 - 24906307
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||    
T  24906352 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 27932243 - 27932284
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaat 106  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  27932243 taataatttgagaaaattacataattcagtgtaattacaaat 27932284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 28588725 - 28588672
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||| |||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcgga 28588672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 7677704 - 7677764
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| ||||||||||||| ||||| || ||||| |||||    
T  7677704 cgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcg 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 21522749 - 21522809
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||| || ||||| |||||    
T  21522749 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 21533315 - 21533375
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||| || ||||| |||||    
T  21533315 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 22013413 - 22013461
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataa 104  Q
    ||||| || |||||||||| ||||||||||||||| |||||||||||||    
T  22013413 cgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 39698549 - 39698585
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39698549 taataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 30098332 - 30098379
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||| ||||| |||||||||| |||||||||| ||||||    
T  30098332 gttaataatttgagaaaatcacataattcaatgtaattatagatgtcg 30098379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 36838551 - 36838602
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||| |||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcg 36838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 41091308 - 41091257
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||| |||||| ||||| |||||||||||||||||||||  |||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 42893359 - 42893418
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||||| || ||||| ||||    
T  42893359 cgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 43564891 - 43564942
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||| |||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 43564942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 4344750 - 4344784
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaat 99  Q
    ||||||||||||||||| |||||||||||||||||    
T  4344750 taataatttgaaaaaatgacataattcagtgtaat 4344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 5468029 - 5467991
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 6471940 - 6471902
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattata 6471902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 14422921 - 14422963
Alignment:
Q  76 aaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||| |||||||||||||||||||||| | |||||||||||    
T  14422921 aaaaatcacataattcagtgtaattataagtttcgatgtcgga 14422963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 14674268 - 14674322
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||| || ||||||||||||||||| |||||||| |||||||||| || |||||    
T  14674268 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 24273089 - 24273043
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||||||    
T  24273089 gacacagttattaatttgagaaaatcacataattcagtgtaattata 24273043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 24389125 - 24389171
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||||||    
T  24389125 gacacagttattaatttgagaaaatcacataattcagtgtaattata 24389171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 30136722 - 30136680
Alignment:
Q  68 taatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    |||||| |||||||||| ||||||| |||||||||||||||||    
T  30136722 taattttaaaaaattacgtaattcaatgtaattataaatgtcg 30136680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 38749614 - 38749576
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattata 38749576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 6326345 - 6326312
Alignment:
Q  68 taatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||||| |||||||||||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaatta 6326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 12641672 - 12641717
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaatt 100  Q
    ||||||||||||||||||| ||||||| |||||||| ||| |||||    
T  12641672 tcgacatagttaataatttaaaaaaatcacataatttagtataatt 12641717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 16374414 - 16374357
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||||||  ||||||| ||||||||||  ||||||| |||||| ||||||||||||    
T  16374414 acactaacacgtcgacatcgttaataattgaaaaaaataacataaatcagtgtaatta 16374357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| | |||||||||||||||||||| |||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 30502439 - 30502386
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| || ||||||||||||||||||  ||||| |||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgga 30502386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 30542782 - 30542729
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| || ||||||||||||||||||  ||||| |||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgga 30542729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 31264446 - 31264491
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||||||||||||||| |||| |||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 10022630 - 10022678
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||| ||| ||||||||| ||||| | |||||||||||||||||||    
T  10022630 tcgacatcgttgataatttgataaaatcatataattcagtgtaattata 10022678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 12280453 - 12280493
Alignment:
Q  58 acatagttaataatttgaaaaaattacataattcagtgtaa 98  Q
    ||||||||||||||||||||| || | ||||||||||||||    
T  12280453 acatagttaataatttgaaaagatcatataattcagtgtaa 12280493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 40000587 - 40000555
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgt 96  Q
    |||||||||||||||||| ||||||||||||||    
T  40000587 ttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 8423769 - 8423716
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcgga 8423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 54580074 - 54580021
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgga 54580021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 47263984 - 47264044
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||| |||||||||| |||||| ||||||||| ||||||||| |||||||||||||    
T  47263984 tcgacatagctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtc 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 2362035 - 2361973
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || |||||||||||||||||||||||||| |||||||||| || ||||| |||||||    
T  2362035 cgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcgga 2361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 21945502 - 21945564
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  21945502 cgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgga 21945564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 38148791 - 38148725
Alignment:
Q  50 acatttcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||  | ||||| ||||| ||||| |||||||||||||||||| |||||||||||||||    
T  38148791 acatttcgacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcg 38148725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 28964307 - 28964246
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| || ||||  |||||||    
T  28964307 gacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcgga 28964246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 23293046 - 23292984
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||||||||||| |||||||||||| |||||| || ||||| |||||||    
T  23293046 cgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgga 23292984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 24343515 - 24343553
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  24343515 taataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 12895325 - 12895272
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||| |||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcgga 12895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 29205452 - 29205497
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||    
T  29205452 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 903928 - 903968
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  903928 gttaataatttgagaaaatcacataattcagtgtaattata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 11596403 - 11596367
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||||||||||||||    
T  11596403 taataatttgaaaaaatcacataattcagtgtaatta 11596367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 22440653 - 22440613
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  22440653 gttaataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 51701266 - 51701302
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||||||||||||||||||||||| ||||||||||    
T  51701266 taataatttgaaaaaattacataattgagtgtaatta 51701302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 1213273 - 1213223
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgt 114  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||||||||    
T  1213273 gttaataattt-aaaaaattatataattcagtgtaattatatgtgtcgatgt 1213223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 32273577 - 32273526
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||||||  ||||||||| | |||||||||    
T  32273577 taataatttgaaaaaataacataattcagaataattataagtttcgatgtcg 32273526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 40179688 - 40179649
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  40179688 ttaatagtttgaaaaaatcacataattcagtgtaattata 40179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 49431024 - 49431087
Alignment:
Q  56 cgacatagttaataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || |||||||||||||||| | ||||||||||||||||||| || ||||| |||||||    
T  49431024 cgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcgga 49431087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 6485663 - 6485617
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    |||||||||||||||||| |||||||| |||||||||| || |||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 14126164 - 14126118
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||    
T  14126164 gttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 15029773 - 15029811
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||||||||||||| || |||||||||||||||||||||    
T  15029773 taataatttgaaaatatcacataattcagtgtaattata 15029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 19230368 - 19230322
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||| ||||||||||| ||||| |||||||||| ||||||||||    
T  19230368 gacatagataataatttgagaaaataacataattcaatgtaattata 19230322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 35158036 - 35157986
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    |||||||||| |||||| |||||||| ||||||||||||| ||||| ||||    
T  35158036 taataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 36635332 - 36635370
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattata 36635370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 37698720 - 37698758
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  37698720 taataatttgagaaaattatataattcagtgtaattata 37698758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 3947826 - 3947781
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || |||||||||||||||||  ||||||||||||||||||    
T  3947826 cgacacagctaataatttgaaaaaatcgcataattcagtgtaatta 3947781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 12797388 - 12797336
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||| | ||||||||||||||||||| || ||||| |||||||    
T  12797388 taataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcgga 12797336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 24999044 - 24999089
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattat 102  Q
    |||| |||| ||||||||||||||| ||| ||||||||||||||||    
T  24999044 gacacagttgataatttgaaaaaatcacacaattcagtgtaattat 24999089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30298945 - 30299006
Alignment:
Q  56 cgacatagttaataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || |||||||||||||||| | ||||||||||||||||||| || ||||| |||||    
T  30298945 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30327813 - 30327874
Alignment:
Q  56 cgacatagttaataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || |||||||||||||||| | ||||||||||||||||||| || ||||| |||||    
T  30327813 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 32910559 - 32910596
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 4383376 - 4383419
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||    
T  4383376 taataatttgaaaaa-tcacataattcagtgtaattacaaatgtc 4383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 4672145 - 4672081
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||| || ||||||||||  |||||||||||||||||||||  ||||  ||||| |||||||||    
T  4672145 cgacacagctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtcggata 4672081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 14465126 - 14465090
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  14465126 taataatttgaaaaaatcacataattcaatgtaatta 14465090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 37203272 - 37203308
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  37203272 taataatttgaaaaaatgacataatttagtgtaatta 37203308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 38847072 - 38847008
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||| || ||||||||||||||||| | || |||||||||||||| || ||||  |||||||||    
T  38847072 cgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcggata 38847008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 28918000 - 28918060
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| || ||||| |||||    
T  28918000 cgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 7928458 - 7928511
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| |||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 7928511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 15796354 - 15796294
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||| || ||||| |||||    
T  15796354 cgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 18426957 - 18427012
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||||||| ||||||| ||||||||| ||||||||||| |||||| |||||||||    
T  18426957 taataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcggata 18427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 25948938 - 25948899
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  25948938 taataatttgaaaaaatcacataattcagtgtaattataa 25948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 4201402 - 4201447
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgt 108  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  4201402 gttaataatttgaaaaaatcacataattaagtgtaattatatatgt 4201447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 4987351 - 4987306
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||    
T  4987351 cgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 8383265 - 8383318
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| | |||||||||||||||||||| ||||| |||||||    
T  8383265 taataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcgga 8383318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 8587069 - 8587012
Alignment:
Q  68 taatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggatatgtgt 125  Q
    |||||||||||||| |||||||| |||||||||| || ||||| ||||||| ||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacatgtgt 8587012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 10268546 - 10268501
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  10268546 cgacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 10954960 - 10955013
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||||| | || ||||| |||||||    
T  10954960 taataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcgga 10955013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 16192803 - 16192750
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||| ||||| |||||||||||||||||||||  ||| |||||||    
T  16192803 gttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcg 16192750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 26508118 - 26508163
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||    
T  26508118 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 29508452 - 29508501
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgt 114  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgt 29508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 51206404 - 51206351
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||||||||||| || || ||||| |||||||    
T  51206404 taataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcgga 51206351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 55401083 - 55401136
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||| |||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgga 55401136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 7614475 - 7614415
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| |||||||||||| | ||||| |||||||||||| |||||||| |||||| |||||    
T  7614475 cgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtcg 7614415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 14979180 - 14979224
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatt 100  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||    
T  14979180 cgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 16789015 - 16789059
Alignment:
Q  60 atagttaataatttgaaaaaattacataattcagtgtaattataa 104  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||    
T  16789015 atagttaataatttaaaaaaatcatataattcagtgtaattataa 16789059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 20503474 - 20503518
Alignment:
Q  66 aataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    |||||||||||||||| ||||||||||||||||||| || |||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 34910325 - 34910361
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34910325 taataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 1509547 - 1509598
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||| |||||    
T  1509547 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 3164086 - 3164043
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaa 98  Q
    |||||| || ||||||||||||||||| ||||||||||||||||    
T  3164086 tcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 8039886 - 8039835
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| ||||||| |||||||||||||||||||  ||||| |||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcg 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 9800048 - 9800099
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| ||||||||||||||| |||||||| ||| ||||| |||||    
T  9800048 taataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcg 9800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 25775515 - 25775570
Alignment:
Q  64 ttaataatttgaaaa-aattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||| ||| ||||||||||||||||||| || ||||| |||||||    
T  25775515 ttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcgga 25775570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 49651837 - 49651786
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||| |||||    
T  49651837 taataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 4991018 - 4990973
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||| ||||| ||||||||||||||||||||||||| || |||||    
T  4991018 taatagtttgagaaaattacataattcagtgtaattacaagtgtcg 4990973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 11251986 - 11252023
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 16000067 - 16000014
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||| ||||||| |||||||||||||||| || || ||||| |||||||    
T  16000067 taataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcgga 16000014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 17005670 - 17005625
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| | |||||||||||||||||||| |||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 21149075 - 21149128
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| ||||||||||||||||| | | |||||| |||||||    
T  21149075 taataatttgagaaaatgacataattcagtgtaatcaaagatgtcgttgtcgga 21149128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 21211296 - 21211333
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  21211296 taataatttgagaaaattacatagttcagtgtaattat 21211333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 21257037 - 21256992
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||| |||||||||||| |||||| || |||||    
T  21257037 taataatttgaaaaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 21479117 - 21479162
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| ||| |||||||||||||||    
T  21479117 cgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 24205092 - 24205047
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  24205092 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 34307831 - 34307786
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  34307831 taataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 11155032 - 11155064
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgta 97  Q
    ||||||||||||||| |||||||||||||||||    
T  11155032 taataatttgaaaaatttacataattcagtgta 11155064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 14209121 - 14209157
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaatta 14209157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 14840343 - 14840303
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataa 104  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  14840343 ttaataatttcagaaaatcacataattcagtgtaattataa 14840303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 27097107 - 27097056
Alignment:
Q  68 taatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    |||||||| |||||||||||||||| | |||||||| |||||| |||||||||    
T  27097107 taatttgagaaaattacataattcaatttaattatatatgtcg-tgtcggata 27097056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 32804593 - 32804553
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  32804593 gttaataatttgagaaaatcacataatttagtgtaattata 32804553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 38731226 - 38731278
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgg 117  Q
    ||||||||| ||||||| ||||||||||||||| |||||  ||||| ||||||    
T  38731226 taataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 39002044 - 39002084
Alignment:
Q  69 aatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||||| |||||||||| |||||||||| |||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaattatatatgtc 39002084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 12668483 - 12668423
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  12668483 cgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 30717590 - 30717530
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  30717590 cgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 23921259 - 23921302
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaat 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23921259 gttaataatttgagaaaattacataattcagtgtaattataaat 23921302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 15972880 - 15972934
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||||||    
T  15972880 ttaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcgga 15972934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 21374759 - 21374714
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  21374759 cgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 15657872 - 15657923
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||| |||||    
T  15657872 taataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 30335425 - 30335476
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||| |||||    
T  30335425 taataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 30404903 - 30404856
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||    
T  30404903 gttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 36756395 - 36756344
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||| |||||    
T  36756395 taataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcg 36756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 40361806 - 40361767
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  40361806 ttaataatttgaaaaaattacataatttagtgtaattata 40361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 12940986 - 12940940
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcga 111  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||    
T  12940986 taataatttgaaaaaatcatataattcagtgtaattacaaatgtcga 12940940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 18841064 - 18841014
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    |||||||||||||||||||||||||| |||||||||| || ||||| ||||    
T  18841064 taataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 28677917 - 28677955
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  28677917 taataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 42832327 - 42832277
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||| ||||    
T  42832327 taataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 2438770 - 2438717
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||| ||||||| ||||||||||||||||||| || ||||| |||||||    
T  2438770 taataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 2438717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 39323272 - 39323308
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39323272 taataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 1886932 - 1886893
Alignment:
Q  62 agttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  1886932 agttaataatttgaaaaatttacataattcaatgtaatta 1886893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 4882747 - 4882696
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||| |||||||||||| | ||||||||||||||||| || |||||||||||    
T  4882747 taattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcg 4882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 28412356 - 28412395
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  28412356 gttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 29176552 - 29176505
Alignment:
Q  57 gacatagttaataatttgaaaaaattacataattcagtgtaattataa 104  Q
    |||| |||||||||||||||||  | ||||||||||||||||||||||    
T  29176552 gacacagttaataatttgaaaaggtcacataattcagtgtaattataa 29176505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 37411295 - 37411244
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||| ||||| |||||||||||||| ||||||  |||||||||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcg 37411244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 11223914 - 11223864
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||| ||||||||||| ||||||||||||||||||| || ||||| ||||    
T  11223914 taatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 19536449 - 19536395
Alignment:
Q  65 taataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||||||||| | ||||||||||||||||||| || ||||| |||||||    
T  19536449 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 19536395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 21616770 - 21616808
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  21616770 taataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 5367200 - 5367253
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||||||  |||| |||||||||||||||||||||  ||||| |||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcgga 5367253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 10535810 - 10535765
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||||||||||||||| |||| |||||    
T  10535810 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 20473330 - 20473383
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||| ||||| | | ||||||||||||||||| || |||||||||||||    
T  20473330 taataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcgga 20473383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 20539735 - 20539674
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||| || ||||||||||||||||| | |||||| |||||||||| || ||||| |||||    
T  20539735 tcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 20539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 21782869 - 21782832
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattat 102  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 29663996 - 29664057
Alignment:
Q  44 acactaacatttcgacatagttaataatttgaaaaaat-tacataattcagtgtaattataa 104  Q
    ||||| |||| ||||||  | ||||||||||||||||| || ||||||||||||||||||||    
T  29663996 acactgacatgtcgacagtgctaataatttgaaaaaatatatataattcagtgtaattataa 29664057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 34691856 - 34691803
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| | |||||||||||||||||||  ||||| |||||||    
T  34691856 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcgga 34691803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 34714268 - 34714215
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| | |||||||||||||||||||  ||||| |||||||    
T  34714268 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcgga 34714215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 11308053 - 11308021
Alignment:
Q  67 ataatttgaaaaaattacataattcagtgtaat 99  Q
    ||||||||||||||| |||||||||||||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaat 11308021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 15909677 - 15909645
Alignment:
Q  71 tttgaaaaaattacataattcagtgtaattata 103  Q
    ||||| |||||||||||||||||||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattata 15909645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 18421970 - 18422022
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||| |||| || ||||||||||||||||||| || ||||| |||||    
T  18421970 ttaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 35449519 - 35449559
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||||| ||||| ||| |||||||||||||||||    
T  35449519 gttaataatttgagaaaatcacagaattcagtgtaattata 35449559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 41942111 - 41942151
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||| ||||||| |||||||||||||||||| ||||||||    
T  41942111 gttaaaaatttgagaaaattacataattcagtataattata 41942151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 18170534 - 18170480
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  18170534 ttaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcgga 18170480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 18634102 - 18634048
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  18634102 ttaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcgga 18634048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 20873068 - 20873130
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||| || ||||| |||||||    
T  20873068 cgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgga 20873130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 4948660 - 4948713
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 4948713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 8342971 - 8343040
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggatatgtgt 125  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||| || ||||| ||||| | ||||||    
T  8342971 cgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgt 8343040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 34897093 - 34897146
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| |||||||||||||||||||||  |||||||||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgga 34897146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 7658471 - 7658526
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  7658471 taataatttgagaaaattacataattcagtgtaattatatttgtcggtgttggata 7658526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 15816180 - 15816129
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 25566849 - 25566900
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| |||||    
T  25566849 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 13203649 - 13203687
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13203649 taataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 14134707 - 14134757
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||| ||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 41832000 - 41831958
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaa 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  41832000 cgacacagttaataatttgaaaaaatcacataattcagtgtaa 41831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 8343315 - 8343360
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  8343315 cgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 11927139 - 11927086
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||| ||||| |||||||||||||||||||||  ||||| |||||    
T  11927139 gttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 24669439 - 24669492
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||| |||||    
T  24669439 gttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 4786390 - 4786334
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    |||||||||| | ||||| |||||||||||||||||||||  ||||| |||||||||    
T  4786390 ttaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcggata 4786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 2572107 - 2572056
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||| |||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 4298946 - 4298887
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||| |||||||||||||||||||| |||||||| | |||||||| || ||||| ||||    
T  4298946 cgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 28642414 - 28642449
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaa 98  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28642414 gttaataatttgaaaaatttacataattcagtgtaa 28642449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 28745506 - 28745557
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||| | |||||||||| ||||| || ||||||||||||||    
T  28745506 taataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcg 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 30077438 - 30077383
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcggata 120  Q
    |||||||||||||| || ||||||||||||||||||| || ||||  |||||||||    
T  30077438 taataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcggata 30077383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 31580180 - 31580125
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| | ||||| |||||||| ||||||||||||  |||||||||||||    
T  31580180 gttaataatttaagaaaatcacataattgagtgtaattataggtgtcgatgtcgga 31580125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 4611542 - 4611580
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  4611542 taataatttgagaaaataacataattcagtgtaattata 4611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 20679446 - 20679396
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||| ||||| ||||| |||||||||||||||| ||||| ||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 22595993 - 22596055
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||| || ||| | |||||||    
T  22595993 cgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcgga 22596055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 25192407 - 25192353
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||| || ||||||||||||||| | |||||||||||| ||||||||| |||||    
T  25192407 cgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 11944671 - 11944724
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||| ||||| |||||| ||||||||||||||  ||||| |||||    
T  11944671 gttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcg 11944724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 12985400 - 12985453
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| |||||||||| |||||| ||| |||||| |||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcgga 12985453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 13844647 - 13844594
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||| ||||| |||||||| ||||||||||||  ||||| |||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcgga 13844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 18646180 - 18646233
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| |||| |||||||||||| ||| |||| | |||||||    
T  18646180 taataatttgaaaaaatgacatgattcagtgtaatcatatatgttggtgtcgga 18646233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 31556996 - 31557040
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||    
T  31556996 cgacacagttaataatttgaaaaa-tcacataattcagtgtaatta 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 36450805 - 36450752
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||| ||||||||||||||| || ||| | |||||||    
T  36450805 taataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcgga 36450752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 44067524 - 44067569
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  44067524 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 2542441 - 2542496
Alignment:
Q  50 acatttcgacatagttaataatttgaaaa--aattacataattcagtgtaattata 103  Q
    |||| ||||||| ||||||||||| ||||  |||||||| ||||||||||||||||    
T  2542441 acatgtcgacatcgttaataatttaaaaaaaaattacatgattcagtgtaattata 2542496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 7442853 - 7442889
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||| | |||||||||||||||||||||||||    
T  7442853 taataatttcataaaattacataattcagtgtaatta 7442889  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 11803265 - 11803305
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattata 103  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  11803265 gttaataatttaagaaaatcacataattcagtgtaattata 11803305  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 22651975 - 22652035
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || ||||||||||||||||| |||||||||| | |||||| || ||||| |||||    
T  22651975 cgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 25887047 - 25886999
Alignment:
Q  63 gttaataatttgaaaaaa-ttacataattcagtgtaattataaatgtcg 110  Q
    |||||||||||||||||| |||||||||| | ||||||||||| |||||    
T  25887047 gttaataatttgaaaaaaattacataatttaatgtaattataagtgtcg 25886999  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  66 aataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    |||||||||| ||||| ||||||||||||||||||| || |||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 90850 - 90901
Alignment:
Q  64 ttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    |||||||||||| ||||| | ||||||||||||||||||| |||||||||||    
T  90850 ttaataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtc 90901  T

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Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 1043 - 1081
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattata 103  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1043 taataatttgaaaaaattacataattcagtgtaactata 1081  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 130481 - 130535
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||| || |||||    
T  130481 cgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 513 - 460
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    ||||||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  513 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgga 460  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 20171 - 20216
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||    
T  20171 cgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 51810 - 51855
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||    
T  51810 cgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 33423 - 33378
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||    
T  33423 cgacacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 14538 - 14574
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14538 taataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 19144 - 19203
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||| ||||||||||| ||||||| |||||||||||||| |||| |||||||| |||||    
T  19144 cgacatggttaataattt-aaaaaatgacataattcagtgtgattaaaaatgtcggtgtcg 19203  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  66 aataatttgaaaaaattacataattcagtgtaattataaatgtcg 110  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 92815 - 92851
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||| |||||||||||||||||||||||||    
T  92815 taataatttgagaaaattacataattcagtgtaatta 92851  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 83172 - 83219
Alignment:
Q  69 aatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| |||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtcg 83219  T

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Target: scaffold0722 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 7093 - 7030
Alignment:
Q  55 tcgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcgga 118  Q
    |||||| || |||||||||||||||||||||||||| ||| |||||| || ||| | |||||||    
T  7093 tcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcgga 7030  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 7522 - 7577
Alignment:
Q  60 atagttaataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgt 114  Q
    ||||||||||||| ||||||| | |||||||| ||| |||||||||||||||||||    
T  7522 atagttaataattcgaaaaaaatcacataatttagtataattataaatgtcgatgt 7577  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 23774 - 23829
Alignment:
Q  62 agttaataatttgaaaaaatt-acataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||    
T  23774 agttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 23829  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 3902 - 3864
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  3902 gttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 63781 - 63831
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||| ||||||||||||||||||| ||||| || ||||| ||||    
T  63781 taataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 192302 - 192264
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaatta 101  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  192302 gttaataatttgagaaaattacataattcggtgtaatta 192264  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 17800 - 17750
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtc 115  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||| ||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 25821 - 25768
Alignment:
Q  63 gttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    |||||||||| || ||||| |||||||| ||||||||||||| ||||| |||||    
T  25821 gttaataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 23438 - 23479
Alignment:
Q  75 aaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||||| |||||||||||||||||||||| ||||| |||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcg 23479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 263423 - 263379
Alignment:
Q  65 taataatttgaaaaaattacataattcagtgtaattataaatgtc 109  Q
    ||||||||||| ||||  |||||||||||||||||||||| ||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 241593 - 241653
Alignment:
Q  56 cgacatagttaataatttgaaaaaattacataattcagtgtaattataaatgtcgatgtcg 116  Q
    ||||| || |||||||||| |||||| |||||||| ||||||||||| | ||||| |||||    
T  241593 cgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcg 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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