View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6988_high_9 (Length: 264)
Name: NF6988_high_9
Description: NF6988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6988_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 30304883 - 30305133
Alignment:
| Q |
1 |
tttcattttgaggatatgaattgttcctcttccttgtgttgtaaaggatcgattcattgggcatttatatgatcatgttttcattttgtccaaaccaaag |
100 |
Q |
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| T |
30304883 |
tttcattttgaggatatgaattgttcctcttccttgtgttgtaaaggatcgattcattggacatttatatgatcatgttttcattttgtccaaaccaaag |
30304982 |
T |
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| Q |
101 |
aaactcaatgtgaagtttgcgacctttttctaaacagcccttgttcttgggatctccatgctacccatgttcctcggcatgatatcaaggacttgatttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
30304983 |
aaactcaatgtgaagtttgcgacctttttctaaacagcccttgttcttgggatctccttgctacccatgttcctcggcatgatatcaaggacttgatttg |
30305082 |
T |
|
| Q |
201 |
caacatgctttttcatatcaacgattcactatggattcatagatttgagta |
251 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
30305083 |
caacatgctttttcatatcaaagattcactatggattcatagatttgagta |
30305133 |
T |
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