View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6991_high_13 (Length: 319)
Name: NF6991_high_13
Description: NF6991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6991_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 12 - 304
Target Start/End: Original strand, 43325446 - 43325738
Alignment:
| Q |
12 |
aacctgtgcttttatttttccaacaaagatccacagatcatagttatatgatacattgctccccaaagtcagaaatacataaataaaacaccacattaga |
111 |
Q |
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|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43325446 |
aaccagtgcttttatttttccaacaaagatctacagatcatagttatatgatacattgctccccaaagtcagaaatacataaataaaacaccacattaga |
43325545 |
T |
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| Q |
112 |
cattactaaaaccacacataactagaattagaaattagtgccttattcacaccgaaaaagacacataatagccttctgtaacaggataatcataccaagt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
43325546 |
cattactaaaaccacacataactagaattagaaattagtgccttattcacaccgaaaaagacacttaatagccttctgtaacaggataatcataccaagt |
43325645 |
T |
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| Q |
212 |
tttataactagaatcataattttagtgccttcttttcacatcgaaaaagacacatagtagccttctgtatcaggataatcgtaccaagtctat |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
43325646 |
tttataactagaatcataattttagtgccttcttttcacatcgaaaaagacacatagtagccttctgtattaggataatcgtaccaagtctat |
43325738 |
T |
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