View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6991_high_14 (Length: 297)
Name: NF6991_high_14
Description: NF6991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6991_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 35351785 - 35352068
Alignment:
| Q |
1 |
ggtgatgaaaatacaaatcaaaatgatgtgcaggtaatgcttgactattatattcaatatggtaagaaatacctatgtcaacaaagttttcgtattactg |
100 |
Q |
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| T |
35351785 |
ggtgatgaaaatacaaatcaaaatgatgtgcaggtaatgcttgactattatattcaatatggtaagaaatacctatgtcaacaaagtttttgtattactg |
35351884 |
T |
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| Q |
101 |
tttcannnnnnncttttgtttaatgtcttgttgaagcacttccaaaagcgctattgctcatgggaaaaataattaatatgttcctggaattattattttg |
200 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
35351885 |
tttcatttttttcttttgtttaatgtcttgttgaagcacttccaaaagcgctattgctcatgggaaaaataattactatgttcctggaattattattttg |
35351984 |
T |
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| Q |
201 |
attctgagaagctcacattgtgtagaaggagatgaattttcgtagagtttaggttttgaaaatgttaaaagtaattgatgtcca |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
35351985 |
attctgagaagctcacattgtgtagaaggagatgaattttcgtagagtttaggttttgaaaatgttaaaagtaattaatgtcca |
35352068 |
T |
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