View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6992_low_3 (Length: 398)
Name: NF6992_low_3
Description: NF6992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6992_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 47287391 - 47287093
Alignment:
| Q |
19 |
taaactacattccttcaaaatcgcccctttagttgccgaatccatcactcctttcaaagacacttaccaccaattccacatgcatgtatatatatatctc |
118 |
Q |
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| T |
47287391 |
taaactacattccttcaaaattgcccctttagttgccgaatccatcactcctttcaaagacacttaccaccaattccacatgcatgtatatatatatctc |
47287292 |
T |
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| Q |
119 |
atgtagtattttatcattcaaatcaatatatatttcattaatttcgtacactaaacaaacccaaatcccaccaacactttactagtaaaatattaatcta |
218 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
47287291 |
atgtagtatttaatcattcaaatcaatatatatttcattaatttcgtacactaaacaaacccaaatcccaccaacactttactagtaaaatattaatcca |
47287192 |
T |
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| Q |
219 |
actactagctactcaattccaacactctacctccttttctcttctaacccacccaaaatgagctctatcacattaatcttaattttcttcatactatct |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
47287191 |
actactagctactcaattccaacactctacctccttttctcttctaacccacccaaaatgagctctatcacattaatcctaattttcttcatactatct |
47287093 |
T |
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