View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6993_low_37 (Length: 317)
Name: NF6993_low_37
Description: NF6993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6993_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 44268731 - 44268994
Alignment:
| Q |
20 |
agatcatatacatatatatgttaaaacttaatacggataatggtccattctaatgctgctcatgtagcacctagttacaaaagctatatgtattggaaat |
119 |
Q |
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| T |
44268731 |
agatcatatacatatatatgttaaaacttaatacggataatggtccattctaatgctgctcatgtagcacctagttacaaaagctatatgtattggaaat |
44268830 |
T |
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| Q |
120 |
ttcccgtgaaaagaaaataccaaaaagcacaagtagcttcatccaaatactaatgaaaacacccaac-aagtatttttaccaacaac-aaaaaatcgtaa |
217 |
Q |
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| T |
44268831 |
ttcccatgaaaagaaaataccaaaaagcacaagtagcttcatccaaatactaatgaaaacacccaacaaagta--tttaccaacaacaaaaaaatcgtaa |
44268928 |
T |
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| Q |
218 |
aaagaagtagaagtacacaactaattacagtaatttgagtttacccctaattaaattgttagacca |
283 |
Q |
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| T |
44268929 |
aaagaagtagaagtacacaactaattacagtaatttgagtttacccctaattaaattgttagacca |
44268994 |
T |
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