View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6993_low_63 (Length: 218)
Name: NF6993_low_63
Description: NF6993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6993_low_63 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 35059711 - 35059913
Alignment:
| Q |
1 |
taaacaatggttgagtgagtccattaatataaataaa----cgtgcatacatgcgtgacaagtagtgataccaatctccctccccattgcaatcatgtcc |
96 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |
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| T |
35059711 |
taaacaatggttgagtgagtccattaatataaataaataaacgtgcatacatgcgtgacaagtcgtgataccaatctccc----cattgcaatcatgtcc |
35059806 |
T |
|
| Q |
97 |
cac---caccaccgcatccttctggtaacgtacccagctcaaggccacataaacccagcccttcaatttgccaagcgactcatatcaatgggtgcacatg |
193 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35059807 |
caccaccaccaccgcatccttctggtaacgtacccagctcaaggccacataaacccagcccttcaatttgccaagcgactcatatcaatgggtgcacatg |
35059906 |
T |
|
| Q |
194 |
tcactct |
200 |
Q |
| |
|
||||||| |
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|
| T |
35059907 |
tcactct |
35059913 |
T |
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