View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6995_high_16 (Length: 259)
Name: NF6995_high_16
Description: NF6995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6995_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 3909073 - 3909247
Alignment:
| Q |
1 |
ctcaaccacgaggtttgaatttgattcctccatctagcatggttaatgctactacttctgttgctactgtttctactgcttataatgaaaattggcctca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3909073 |
ctcaaccacgaggtttgaatttgattcctccatctaccatggttaatgctactacttctgttgctactgtttctactgcttataatgaaaattggcctca |
3909172 |
T |
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| Q |
101 |
aaacttcatcaatagtggtaacaacagagcctctgatcaatctttatggagtactatcagcaccacttcaattaa |
175 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3909173 |
aagcttcatcaatagtggtaacaacagagcctctgatcaatctttatggagtactatcagcaccacttcaattaa |
3909247 |
T |
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