View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6995_low_24 (Length: 256)
Name: NF6995_low_24
Description: NF6995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6995_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 10566766 - 10566517
Alignment:
| Q |
1 |
attcttcttttaactttctattgaatcaaagctatgccagtacgtcttttggtgagctactgcattctggtttggaagattcagaggtggaacagtataa |
100 |
Q |
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| T |
10566766 |
attcttcttttaactttctattgaatcaaagctatgccagtacgtcttttggtgagctactgcattctggtttggaagattcagaggtggaacagtataa |
10566667 |
T |
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| Q |
101 |
atatttagaaacaaataatgatgcatgcttaaacaacacacataaatcacttgatatgtcctggtttccagaatcaagatttgtttccgagactgcaatt |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10566666 |
atatttagaaacaaataatgatacatgcttaaacaacacatataaatcacttgatatgtcctggtttccagaatcaagatttgtttccgagactgcaatt |
10566567 |
T |
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| Q |
201 |
caaaacagaacagaaacattgtctacagttgtgtcttctgatgtccatct |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||| || |||||| |
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| T |
10566566 |
caaaacagaacagaaacattgtctacagttgtgtcttctggtggccatct |
10566517 |
T |
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