View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6995_low_4 (Length: 503)

Name: NF6995_low_4
Description: NF6995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6995_low_4
NF6995_low_4
[»] chr7 (51 HSPs)
chr7 (17-319)||(11685331-11685633)
chr7 (17-319)||(34784136-34784441)
chr7 (189-489)||(45464683-45464983)
chr7 (343-495)||(11684057-11684209)
chr7 (189-489)||(4321375-4321673)
chr7 (144-495)||(38614327-38614669)
chr7 (190-495)||(2168343-2168649)
chr7 (189-489)||(34692250-34692554)
chr7 (189-489)||(48302444-48302744)
chr7 (189-418)||(1547241-1547467)
chr7 (185-470)||(3690440-3690725)
chr7 (189-298)||(30108857-30108966)
chr7 (328-489)||(30109024-30109185)
chr7 (189-495)||(23954794-23955099)
chr7 (207-495)||(46994973-46995261)
chr7 (51-169)||(6058312-6058430)
chr7 (188-470)||(36756398-36756681)
chr7 (188-470)||(36762195-36762478)
chr7 (17-180)||(34784953-34785106)
chr7 (189-260)||(19712014-19712085)
chr7 (188-319)||(36766074-36766205)
chr7 (207-318)||(40785216-40785327)
chr7 (49-169)||(43009516-43009636)
chr7 (185-319)||(46810995-46811129)
chr7 (51-169)||(46866596-46866714)
chr7 (51-144)||(25971811-25971904)
chr7 (185-299)||(7403476-7403590)
chr7 (70-211)||(19712098-19712237)
chr7 (191-319)||(8421712-8421840)
chr7 (186-304)||(13036191-13036309)
chr7 (185-319)||(45360929-45361062)
chr7 (328-433)||(48705396-48705499)
chr7 (390-475)||(40785079-40785164)
chr7 (207-319)||(35342738-35342850)
chr7 (247-319)||(48850929-48851001)
chr7 (186-320)||(23904917-23905052)
chr7 (50-167)||(3920847-3920964)
chr7 (189-319)||(6605032-6605162)
chr7 (289-376)||(12903939-12904026)
chr7 (185-319)||(13169302-13169435)
chr7 (185-319)||(39857999-39858133)
chr7 (189-319)||(47384608-47384738)
chr7 (186-241)||(12904046-12904101)
chr7 (186-304)||(48311427-48311543)
chr7 (17-87)||(3690247-3690317)
chr7 (185-275)||(3921007-3921096)
chr7 (352-406)||(8421867-8421921)
chr7 (46-87)||(47339902-47339943)
chr7 (186-318)||(22155495-22155626)
chr7 (186-318)||(22211410-22211541)
chr7 (187-319)||(38472573-38472705)
[»] chr8 (52 HSPs)
chr8 (17-319)||(11031526-11031828)
chr8 (189-489)||(40019448-40019748)
chr8 (186-397)||(25356622-25356834)
chr8 (185-495)||(33369050-33369362)
chr8 (198-489)||(28432520-28432810)
chr8 (17-319)||(10269206-10269525)
chr8 (186-495)||(9876053-9876361)
chr8 (185-475)||(461467-461756)
chr8 (189-475)||(33158951-33159236)
chr8 (189-319)||(9186302-9186432)
chr8 (186-484)||(38881691-38881992)
chr8 (17-205)||(9186451-9186639)
chr8 (71-319)||(10267957-10268223)
chr8 (189-419)||(44620244-44620472)
chr8 (185-470)||(1321829-1322115)
chr8 (185-317)||(10770636-10770768)
chr8 (214-319)||(12515395-12515499)
chr8 (186-291)||(25373335-25373440)
chr8 (185-266)||(25705571-25705652)
chr8 (352-495)||(33748793-33748935)
chr8 (185-440)||(42895061-42895317)
chr8 (189-319)||(15684048-15684178)
chr8 (186-292)||(25402504-25402610)
chr8 (186-292)||(25707013-25707119)
chr8 (185-304)||(11719746-11719865)
chr8 (185-252)||(25370798-25370865)
chr8 (41-182)||(38884665-38884807)
chr8 (186-319)||(17807313-17807446)
chr8 (328-473)||(25371636-25371781)
chr8 (185-495)||(31822975-31823276)
chr8 (188-319)||(11790496-11790627)
chr8 (185-319)||(32823938-32824072)
chr8 (17-87)||(12515181-12515251)
chr8 (390-475)||(37525333-37525418)
chr8 (285-397)||(8655640-8655752)
chr8 (185-304)||(24527184-24527303)
chr8 (185-303)||(37525149-37525267)
chr8 (185-319)||(41041032-41041166)
chr8 (186-319)||(13484831-13484964)
chr8 (45-154)||(44620526-44620635)
chr8 (51-123)||(37803549-37803621)
chr8 (442-495)||(11719994-11720047)
chr8 (186-319)||(41824261-41824394)
chr8 (17-122)||(44528062-44528167)
chr8 (207-319)||(31199797-31199909)
chr8 (207-319)||(33748647-33748759)
chr8 (72-179)||(15683899-15684005)
chr8 (423-470)||(32823816-32823863)
chr8 (442-495)||(11790317-11790370)
chr8 (186-319)||(22273535-22273668)
chr8 (187-319)||(29693963-29694095)
chr8 (457-489)||(42895321-42895353)
[»] chr3 (48 HSPs)
chr3 (17-407)||(30501214-30501610)
chr3 (185-493)||(26448037-26448342)
chr3 (28-393)||(40962981-40963352)
chr3 (187-495)||(1847154-1847462)
chr3 (189-489)||(41945600-41945898)
chr3 (187-483)||(32842721-32843017)
chr3 (193-419)||(49494787-49495011)
chr3 (185-486)||(48634872-48635173)
chr3 (185-474)||(24382004-24382293)
chr3 (189-304)||(37865676-37865791)
chr3 (51-169)||(5127289-5127407)
chr3 (51-169)||(5134544-5134662)
chr3 (207-466)||(31885830-31886088)
chr3 (287-495)||(33112233-33112441)
chr3 (361-489)||(37886239-37886367)
chr3 (285-489)||(23775149-23775353)
chr3 (185-319)||(2975749-2975883)
chr3 (189-298)||(33051144-33051253)
chr3 (343-495)||(45897487-45897640)
chr3 (185-495)||(35861831-35862141)
chr3 (357-495)||(2975887-2976024)
chr3 (18-169)||(41625193-41625344)
chr3 (185-470)||(18429030-18429314)
chr3 (185-470)||(45255773-45256058)
chr3 (207-470)||(33851294-33851555)
chr3 (72-169)||(17260655-17260752)
chr3 (70-154)||(54094020-54094104)
chr3 (186-319)||(2378576-2378709)
chr3 (210-411)||(10380511-10380713)
chr3 (186-319)||(23875963-23876095)
chr3 (186-319)||(42282135-42282268)
chr3 (185-319)||(610850-610984)
chr3 (83-182)||(7589437-7589540)
chr3 (442-488)||(13466609-13466655)
chr3 (17-87)||(26447851-26447921)
chr3 (17-87)||(33851079-33851149)
chr3 (189-319)||(51686013-51686143)
chr3 (186-319)||(17516608-17516741)
chr3 (186-319)||(30598658-30598791)
chr3 (185-317)||(44268301-44268432)
chr3 (185-319)||(23887489-23887622)
chr3 (185-319)||(27897512-27897646)
chr3 (17-87)||(33111938-33112008)
chr3 (46-87)||(18428873-18428914)
chr3 (442-495)||(22218719-22218772)
chr3 (22-87)||(41946023-41946088)
chr3 (186-311)||(45897342-45897467)
chr3 (45-154)||(49494602-49494711)
[»] chr2 (34 HSPs)
chr2 (189-489)||(11021825-11022125)
chr2 (189-489)||(28247674-28247974)
chr2 (189-319)||(363354-363485)
chr2 (189-478)||(11313127-11313402)
chr2 (189-489)||(38149535-38149836)
chr2 (189-319)||(7744932-7745062)
chr2 (187-494)||(10715400-10715690)
chr2 (186-319)||(17948601-17948734)
chr2 (185-489)||(37418263-37418569)
chr2 (50-200)||(363509-363653)
chr2 (257-495)||(35643-35881)
chr2 (72-169)||(40099115-40099212)
chr2 (189-312)||(2359394-2359516)
chr2 (186-489)||(42880309-42880610)
chr2 (18-170)||(4415271-4415423)
chr2 (49-169)||(14001336-14001454)
chr2 (286-446)||(40150664-40150825)
chr2 (185-319)||(34400628-34400762)
chr2 (286-397)||(40152135-40152246)
chr2 (352-470)||(42002990-42003108)
chr2 (185-319)||(42517877-42518011)
chr2 (207-319)||(15373554-15373667)
chr2 (186-318)||(17697776-17697903)
chr2 (17-87)||(10715205-10715275)
chr2 (17-87)||(11312948-11313018)
chr2 (185-319)||(19907036-19907170)
chr2 (49-154)||(17948784-17948889)
chr2 (218-319)||(26581329-26581430)
chr2 (73-109)||(59990-60026)
chr2 (207-319)||(41708097-41708209)
chr2 (186-227)||(161813-161854)
chr2 (185-266)||(16377082-16377163)
chr2 (247-319)||(14387765-14387837)
chr2 (51-115)||(32607310-32607374)
[»] chr1 (32 HSPs)
chr1 (189-489)||(5784366-5784666)
chr1 (186-495)||(42558248-42558546)
chr1 (189-419)||(51123115-51123342)
chr1 (189-489)||(11152837-11153136)
chr1 (202-319)||(25172701-25172818)
chr1 (185-495)||(31803190-31803500)
chr1 (185-495)||(46637056-46637365)
chr1 (185-470)||(45379374-45379658)
chr1 (207-470)||(44158807-44159072)
chr1 (41-180)||(25172876-25173005)
chr1 (185-470)||(42135761-42136045)
chr1 (51-169)||(43870156-43870274)
chr1 (352-495)||(18183063-18183205)
chr1 (185-316)||(33679549-33679680)
chr1 (18-179)||(42558055-42558216)
chr1 (185-317)||(6576774-6576906)
chr1 (185-470)||(35478378-35478660)
chr1 (185-319)||(50554500-50554634)
chr1 (185-319)||(31237139-31237273)
chr1 (186-319)||(18058121-18058254)
chr1 (17-76)||(34041763-34041822)
chr1 (189-319)||(15105986-15106116)
chr1 (236-318)||(18180818-18180900)
chr1 (186-319)||(6817200-6817333)
chr1 (51-123)||(51546213-51546285)
chr1 (352-470)||(33679696-33679814)
chr1 (79-177)||(35009511-35009608)
chr1 (207-319)||(27952167-27952279)
chr1 (76-179)||(3369587-3369689)
chr1 (49-124)||(51123442-51123517)
chr1 (185-319)||(2870712-2870845)
chr1 (17-87)||(44159218-44159288)
[»] chr4 (45 HSPs)
chr4 (189-489)||(39922506-39922806)
chr4 (189-489)||(39084651-39084951)
chr4 (189-489)||(39190318-39190618)
chr4 (189-489)||(42879576-42879876)
chr4 (189-489)||(43778681-43778979)
chr4 (189-489)||(5485551-5485851)
chr4 (189-488)||(44993100-44993399)
chr4 (190-319)||(13438146-13438275)
chr4 (189-489)||(32653130-32653430)
chr4 (200-385)||(25994708-25994897)
chr4 (189-319)||(230740-230869)
chr4 (185-495)||(4519959-4520270)
chr4 (21-212)||(230537-230728)
chr4 (17-212)||(39294645-39294840)
chr4 (246-318)||(39294553-39294625)
chr4 (207-470)||(44556920-44557183)
chr4 (185-469)||(27626246-27626530)
chr4 (18-169)||(50132945-50133096)
chr4 (186-475)||(51041027-51041314)
chr4 (187-299)||(28100865-28100977)
chr4 (187-319)||(13449984-13450107)
chr4 (185-319)||(2691684-2691818)
chr4 (186-319)||(20820290-20820423)
chr4 (285-463)||(35997284-35997462)
chr4 (18-82)||(6999229-6999293)
chr4 (207-319)||(47942413-47942525)
chr4 (381-488)||(10544498-10544605)
chr4 (18-167)||(44973945-44974092)
chr4 (186-319)||(54387537-54387670)
chr4 (207-319)||(44793246-44793358)
chr4 (72-179)||(26397756-26397862)
chr4 (72-179)||(28100717-28100823)
chr4 (185-319)||(11254378-11254512)
chr4 (17-87)||(43823494-43823563)
chr4 (191-276)||(10544693-10544778)
chr4 (185-266)||(26397635-26397715)
chr4 (49-170)||(27383815-27383936)
chr4 (186-319)||(49524394-49524527)
chr4 (455-495)||(27385940-27385980)
chr4 (70-169)||(9590451-9590549)
chr4 (334-495)||(28101018-28101179)
chr4 (46-87)||(5485976-5486017)
chr4 (22-87)||(32653555-32653620)
chr4 (17-61)||(13438012-13438056)
chr4 (22-86)||(15450341-15450405)
[»] chr5 (35 HSPs)
chr5 (17-314)||(24497749-24498061)
chr5 (185-319)||(1344478-1344612)
chr5 (189-489)||(42619581-42619875)
chr5 (185-495)||(18726853-18727164)
chr5 (236-495)||(35291387-35291644)
chr5 (185-487)||(38176923-38177225)
chr5 (185-487)||(38204147-38204449)
chr5 (207-495)||(40330004-40330293)
chr5 (185-495)||(32089411-32089725)
chr5 (187-319)||(1343482-1343614)
chr5 (189-419)||(27350095-27350322)
chr5 (342-495)||(43317176-43317329)
chr5 (210-489)||(32836192-32836470)
chr5 (343-495)||(18341593-18341745)
chr5 (185-419)||(6116465-6116700)
chr5 (44-182)||(25509635-25509773)
chr5 (185-319)||(18623765-18623899)
chr5 (207-467)||(35400226-35400486)
chr5 (185-319)||(32134556-32134690)
chr5 (448-495)||(33257262-33257309)
chr5 (186-319)||(12738337-12738470)
chr5 (186-319)||(12801160-12801293)
chr5 (186-319)||(27077123-27077256)
chr5 (186-319)||(33257426-33257559)
chr5 (46-87)||(38176758-38176799)
chr5 (46-87)||(38203982-38204023)
chr5 (49-109)||(27350437-27350497)
chr5 (442-489)||(27076963-27077010)
chr5 (17-87)||(1344738-1344808)
chr5 (17-87)||(35291145-35291215)
chr5 (198-316)||(41494167-41494285)
chr5 (17-87)||(43316877-43316947)
chr5 (18-87)||(1343319-1343388)
chr5 (185-266)||(30464263-30464344)
chr5 (186-266)||(28035772-28035852)
[»] chr6 (12 HSPs)
chr6 (189-489)||(17950853-17951152)
chr6 (189-489)||(35174674-35174974)
chr6 (20-311)||(31210129-31210431)
chr6 (187-483)||(17936042-17936339)
chr6 (189-489)||(34344824-34345123)
chr6 (189-317)||(4289710-4289838)
chr6 (185-319)||(33277101-33277234)
chr6 (186-319)||(7371453-7371586)
chr6 (53-170)||(25170430-25170547)
chr6 (187-311)||(30639903-30640027)
chr6 (189-266)||(33267342-33267419)
chr6 (185-304)||(11356803-11356922)
[»] scaffold0006 (2 HSPs)
scaffold0006 (191-419)||(37856-38082)
scaffold0006 (49-124)||(38166-38241)
[»] scaffold0070 (1 HSPs)
scaffold0070 (185-406)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (185-252)||(2643-2710)
scaffold1041 (185-252)||(2356-2423)
[»] scaffold0722 (2 HSPs)
scaffold0722 (185-314)||(4446-4574)
scaffold0722 (98-179)||(4327-4407)
[»] scaffold0564 (1 HSPs)
scaffold0564 (186-319)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (185-304)||(1164-1283)
[»] scaffold0129 (1 HSPs)
scaffold0129 (39-123)||(5947-6031)


Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 319
Target Start/End: Complemental strand, 11685633 - 11685331
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||||||||    
T  11685633 gtcaatcaatttagtcactctgtccaattggagtgttaacggtgctgacgtggccgttaacctctcacatgggttgccatgtcggatgccacagaagcag 11685534  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatacaaaattggaa 216  Q
     ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  11685533 ggactaatgtggtcgatagcgaccaaaatttccaaggatcaaattgattgatttgtagaaaatgctttgctctttctcccccaaatatataaaattggaa 11685434  T
Q  217 ccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccct 316  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||    
T  11685433 ccctaattttacaatctgtaatctacactccaaaatctccaaaatttctttcaataattagaggtaacgttcttcaccaattcaaaaagcttcaaaacct 11685334  T
Q  317 aat 319  Q
    |||    
T  11685333 aat 11685331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 319
Target Start/End: Original strand, 34784136 - 34784441
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||  |||||||| |||||||||||||| |||||| ||||||||||||||||||          ||| |||||||| ||||||    
T  34784136 gtcaatcaatttagtccctccgtccaattgcagtgttaacggtgctgacgtggccgttaacctctcacatg----------tcatatgccacataagcag 34784225  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg--ctttgctc-----------tttcttcctcaaata 203  Q
     ||||||| ||   || |||||||||||||||||||||  ||||| ||||||||| ||||||||  |||| |||           |||||||| ||||||    
T  34784226 ggactaatttgactgatagtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatgttctttcctccccaacgactctttcttccccaaata 34784325  T
Q  204 tacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 303  Q
    || ||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  34784326 tataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttatgtcaataattagtggtaacgttcttccccaattcaaaa 34784425  T
Q  304 agcttcaaaccctaat 319  Q
    | || |||||||||||    
T  34784426 aactccaaaccctaat 34784441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 45464983 - 45464683
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||  ||| ||||||    
T  45464983 tttcttcctcaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttctttcaataattaagggtcacgttc 45464884  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||| | |||| || ||||||||    
T  45464883 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaatactgttgaaattgaatct 45464784  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  45464783 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 45464684  T
Q  489 g 489  Q
    |    
T  45464683 g 45464683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 343 - 495
Target Start/End: Complemental strand, 11684209 - 11684057
Alignment:
Q  343 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaa-gcaattatgaaagtcaagcttt 441  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||     
T  11684209 caaaatccccaaaatttcttcaagcaaaattgttcaatttgaatccgaaatgatgaggggtgg-tgtaagggcaaaaagcaattatgaaagtcgagcttc 11684111  T
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  11684110 atctttaagctccatgtttaatggtgatgtgagagtacttgaatgttggtgtcc 11684057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 4321375 - 4321673
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||| ||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  4321375 tttcatccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctcaaaattttcttccaataattaagggtcacgttc 4321474  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  4321475 ttccccaaatcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 4321573  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  4321574 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatgttgatgtgagagtgcttgaatgtt 4321672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 144 - 495
Target Start/End: Complemental strand, 38614669 - 38614327
Alignment:
Q  144 atttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctaca 243  Q
    ||||| |||||  ||||| ||||||||| |||||||| ||||  ||||||||| ||  | || |||||||||| |||||||  ||||| || ||||||      
T  38614669 atttcaaaggactaaattgattgatttgcagaaaatgttttgg-ctttcttccccagctgtataaaattggaatcctaattacacaatctgcaatcta-- 38614573  T
Q  244 ctccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattc 343  Q
         ||||  |||||||||| | ||||||| ||||||   ||||||| || ||||||||| ||||||||||||||        |||||||| ||||  |    
T  38614572 -----aaatcaccaaaatttcctccaataataagtggtccagttcttctccgattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagcc 38614478  T
Q  344 aaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttat 443  Q
    ||||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||    
T  38614477 aaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcat 38614379  T
Q  444 ctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||| |||||||| || |||||||||||||||||||||| ||||||| |||||    
T  38614378 cttcaagctccaagtctaatggtgatgtgagagtgcttaaatgttggtgtcc 38614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 190 - 495
Target Start/End: Complemental strand, 2168649 - 2168343
Alignment:
Q  190 ttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 289  Q
    ||||||| ||| | || ||||||| ||||||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||| ||   |||||    
T  2168649 ttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtagtccagttct 2168550  T
Q  290 tccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 389  Q
    || |||||||||||| ||||||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||     
T  2168549 tctccaattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatcta 2168450  T
Q  390 aaatgatgaggggtgggtgtaaggg--caaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 487  Q
    |||||||| ||||||||  || |||   ||||  | ||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||  |||||    
T  2168449 aaatgatg-ggggtgggaatatgggaaaaaaaatagttatgaaagtcgagctttatcttcaagctccaagtttaatggtgatgtcagagtgctcaaatgt 2168351  T
Q  488 tgatgtcc 495  Q
    || |||||    
T  2168350 tggtgtcc 2168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 34692554 - 34692250
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||||||| ||||||    
T  34692554 tttcttccccaaatatataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattagtggtcacgttc 34692455  T
Q  289 ttccccaattcaaaaagcttcaaacc-ctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    |||||||| |||||||  | |||||| ||||    |        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || |||    
T  34692454 ttccccaaatcaaaaaattccaaaccactaatttttttttttttattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattg 34692355  T
Q  384 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 483  Q
    ||||| |||||||| ||||| |   || ||||||||  |  ||| |||||||||||| ||||| |  || |||||||||| ||||||||||| |||||||    
T  34692354 aatctaaaatgatg-ggggtagtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctacatgtttaatagtgatgtgagaatgcttga 34692256  T
Q  484 atgttg 489  Q
    ||||||    
T  34692255 atgttg 34692250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 48302444 - 48302744
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||| ||| ||||||||||||| |||| |||||||||||||||  ||||| || ||| |||||||||   || ||||||    
T  48302444 tttcttccccaaatatataaaattgaaactctaattttacaatgtgtattctacactccaaaatctccaaatttgcttccaataattaagagtcacgttc 48302543  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || ||||| |     
T  48302544 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatatgaaaaccaaaatcttcaaaattcattcaagcaaaactgttgaaattgaaaca 48302643  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||  |||||||   || ||||||||  |  ||| ||||||||| || ||||| |   |||||||||||||||||||||||||||||||||||||    
T  48302644 aaaatgattgggggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcttccatgtttaatggtgatgtgagagtgcttgaatgtt 48302743  T
Q  489 g 489  Q
    |    
T  48302744 g 48302744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 189 - 418
Target Start/End: Complemental strand, 1547467 - 1547241
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||||| ||||||||||||||||| | ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1547467 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactctaaaattcccaaaa-ttctttcaataattagtggtaacgttc 1547369  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 387  Q
    |||||| ||| ||| | | ||||||||||||        ||||||| ||||||   |||||| |||||||| |||||| ||||| ||||  | ||||||     
T  1547368 ttccccgattgaaataacctcaaaccctaat--tttttgattgaattcgaaataaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaata 1547271  T
Q  388 tgaaatgatgaggggtgggtgtaagggcaaa 418  Q
     ||||||||| |||||||||||| |||||||    
T  1547270 cgaaatgatg-ggggtgggtgtatgggcaaa 1547241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 470
Target Start/End: Original strand, 3690440 - 3690725
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || ||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  3690440 gctctgtcttccccaattgtataaaattggaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 3690539  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  3690540 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 3690639  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    |||||||||||   ||||||||  || ||| ||||    ||||||||||||||||| ||||| |||||||| ||||| ||||||||    
T  3690640 atctgaaatgaaatggggtgggaatatgggaaaaaattgttatgaaagtcaagcttcatcttcaagctccaagtttagtggtgatg 3690725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 298
Target Start/End: Original strand, 30108857 - 30108966
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  30108857 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 30108956  T
Q  289 ttccccaatt 298  Q
    ||||||||||    
T  30108957 ttccccaatt 30108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 328 - 489
Target Start/End: Original strand, 30109024 - 30109185
Alignment:
Q  328 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 427  Q
    |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || |||||||| |||||||| | |||||   || ||||||||  || |||    
T  30109024 attgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatctaaaatgatgggaggtggtcatatgggcaaaaagaactat 30109123  T
Q  428 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 489  Q
     |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  30109124 caaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 30109185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 495
Target Start/End: Complemental strand, 23955099 - 23954794
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||| | || ||||||||||||||||||  ||||| |  | ||||||||| |||||  | |||||||| | ||||||| ||||||   ||||    
T  23955099 tttcttccccaattgtataaaattggaaccctaattacacaatcttcagtctacactctaaaataacaaaaatttcctccaataataagtggtccagttc 23955000  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    ||| ||||||||| || ||||||||||||||        |||||||| ||||   ||||||  ||||||||||| |||||||| | || |  ||||||||    
T  23954999 ttcgccaattcaacaaacttcaaaccctaatttcttggtattgaatctgaaagctaaaatcctcaaaatttcttgaagcaaaactattgacattgaatct 23954900  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
    ||||||| | |||||| |  || ||  |||| || |||||||| || ||||| |||||  ||||||| ||||||||||| ||| ||||||||||||||||    
T  23954899 gaaatgacg-ggggtgagaatatggaaaaaaacagttatgaaaatcgagcttcatcttcgagctccaagtttaatggtgttgttagagtgcttgaatgtt 23954801  T
Q  489 gatgtcc 495  Q
    | |||||    
T  23954800 ggtgtcc 23954794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 207 - 495
Target Start/End: Original strand, 46994973 - 46995261
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    |||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||| |    
T  46994973 aaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaaaac 46995072  T
Q  307 ttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgg 405  Q
    | |||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || ||||||||||||||||| |||||||    
T  46995073 tccaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtggggtgg 46995172  T
Q  406 gtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    |  || ||  | || |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  46995173 gaatatggaaataa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 46995261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 6058430 - 6058312
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcca 150  Q
    ||||||||||  |||||| |||||||||||||||||| |||||||| |||||||||||| |||||| ||||||  |||| || |||||| ||||||||||    
T  6058430 gttaacggtgatgacgtggccgttaacctctcacatgtgttgccatgtcagatgccacataagcagggactaaattggttgatagtgacaaaaatttcca 6058331  T
Q  151 aggatcaaattaattgatt 169  Q
    ||||  ||||| |||||||    
T  6058330 aggacgaaattgattgatt 6058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 470
Target Start/End: Complemental strand, 36756681 - 36756398
Alignment:
Q  188 ctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 287  Q
    ||||||||| ||| | || ||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36756681 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36756582  T
Q  288 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36756581 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36756482  T
Q  387 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36756481 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36756398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 470
Target Start/End: Complemental strand, 36762478 - 36762195
Alignment:
Q  188 ctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 287  Q
    ||||||||| ||| | || ||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36762478 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36762379  T
Q  288 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36762378 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36762279  T
Q  387 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36762278 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36762195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 34785106 - 34784953
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| ||||||  |||||||||||||||||          |||||||||||| |||||     
T  34785106 gtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtggtcgttaacctctcacatg----------tcagatgccacataagcaa 34785017  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg 180  Q
     ||||||| |||  || |||||||||||||| ||||||  ||||| ||||||||| ||||||||    
T  34785016 ggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattgatttgcagaaaatg 34784953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 19712085 - 19712014
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaa 260  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19712085 tttcttccccaaatatataaaattggaaccctaattttacaatctgtaatctacactccaaaatttccaaaa 19712014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 319
Target Start/End: Complemental strand, 36766205 - 36766074
Alignment:
Q  188 ctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 287  Q
    ||||||||| ||| | || ||||||| |||||||||| |||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36766205 ctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36766106  T
Q  288 cttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||| ||||||||||||||    
T  36766105 cttccccaattcaaaaaacttcaaaccctaat 36766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 40785327 - 40785216
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||| |||||||||| |||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   |||||||||||||||||||| |    
T  40785327 aaaattgtaaccctaattgtacaatctgcaatctacactccaaaatcaccaaaatttcctccactaataagtggtccagttcttccccaattcaaaaatc 40785228  T
Q  307 ttcaaaccctaa 318  Q
    ||||||||||||    
T  40785227 ttcaaaccctaa 40785216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 43009636 - 43009516
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 148  Q
    ||||||||||||  |||||| ||||| ||||||| ||||| ||| ||| ||||||| |||| ||| || ||||||| ||| ||| |||||||||||||||    
T  43009636 gtgttaacggtgatgacgtggccgttgacctctctcatggattgtcatgtcagatgtcacataagtagggactaatttggccgatagtgaccaaaatttc 43009537  T
Q  149 caaggatcaaattaattgatt 169  Q
    ||||||  ||||| |||||||    
T  43009536 caaggacgaaattgattgatt 43009516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 46810995 - 46811129
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||| | ||| | || ||||||||||| ||||||  ||| | || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  46810995 gctctttctttcccaattgtataaaattggaactctaattacacagtctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 46811094  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||||||||||||||    
T  46811095 gttcttccccaattcaaaaaacttcaaaccctaat 46811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 46866596 - 46866714
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcca 150  Q
    ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||||||| || ||| ||||||    || || |||||| ||||||||||    
T  46866596 gttaacggtgatgacgtggccgttaacctctcatatgggttgccatgtcagatgccacataaacagggactaaatatgttgatagtgacaaaaatttcca 46866695  T
Q  151 aggatcaaattaattgatt 169  Q
    ||||  ||||| |||||||    
T  46866696 aggacgaaattgattgatt 46866714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 25971811 - 25971904
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaa 144  Q
    ||||||||||  |||||| |||||||||||||||||| |||||||| |||||| ||||| |||||||||||||  |||| || |||||| ||||    
T  25971811 gttaacggtgatgacgtggccgttaacctctcacatgagttgccatgtcagataccacataagcagagactaaattggttgatagtgacaaaaa 25971904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 7403590 - 7403476
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||| | ||||| ||  |||||||||||||| ||||||||||||||||||| | ||||||||  |||| ||||||| || |||||  ||  |||    
T  7403590 gctctttctttcccaaatctattaaattggaaccctagttttacaatatgtaatctagagtccaaaatctccaagatttcttccattaattgatgacaac 7403491  T
Q  285 gttcttccccaattc 299  Q
    ||||||| |||||||    
T  7403490 gttcttctccaattc 7403476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 19712237 - 19712098
Alignment:
Q  70 ccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 169  Q
    ||||| ||||||||||||  ||  ||| ||||||| || | |||||||||||||| | |  || |||||||| || ||| |||||  |||||||||||||    
T  19712237 ccgttcacctctcacatgtctt--catgtcagatgtcagacaagcagagactaatttagctgatagtgaccataacttcaaaggactaaattaattgatt 19712140  T
Q  170 tgtagaaaatgctttgctctttcttcctcaaatatacaaaat 211  Q
    ||| ||||||| ||||| ||||||||| |||||||| |||||    
T  19712139 tgttgaaaatgttttgccctttcttccccaaatatataaaat 19712098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 8421712 - 8421840
Alignment:
Q  191 tcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 290  Q
    |||||| ||| |||| ||||||| ||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  8421712 tcttccccaattatataaaattgaaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 8421811  T
Q  291 ccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||| ||| ||||||||||    
T  8421812 ccccaattcaaaaaacttaaaaccctaat 8421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 13036309 - 13036191
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| |||||| ||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| || |||||  ||  || |    
T  13036309 ctctttcttccccaaatatataaatttggaatccttattttataatttgtcacctagagttcaaaatccccaaaatttcttccattaattgatgacaaag 13036210  T
Q  286 ttcttccccaattcaaaaa 304  Q
    |||||||||||||||||||    
T  13036209 ttcttccccaattcaaaaa 13036191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 45361062 - 45360929
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||  ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||| ||||  ||  ||     
T  45361062 gctctttcttccccaaatatt-aaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacaagaattgatgtcaat 45360964  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  45360963 gttcttccccaattcaaaaaacttaaaaccctaat 45360929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 433
Target Start/End: Complemental strand, 48705499 - 48705396
Alignment:
Q  328 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 427  Q
    |||||||||||||  || |||| ||| ||||||||||||||||| ||||||| ||||||| ||||||||  ||||||||  || ||||||||  ||||||    
T  48705499 attgaatccgaaaaccagaatctccataatttcttcaagcaaaactgttcaaattgaatccgaaatgat--ggggtgggcatatgggcaaaaagaattat 48705402  T
Q  428 gaaagt 433  Q
     |||||    
T  48705401 caaagt 48705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 40785164 - 40785079
Alignment:
Q  390 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 475  Q
    |||||||| ||||||||  || ||  |||| |||||||||||||| |||||  |||| |||||||| |||||||||||||||||||    
T  40785164 aaatgatggggggtgggaatatggaaaaaaacaattatgaaagtcgagcttcttcttcaagctccaagtttaatggtgatgtgaga 40785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 35342738 - 35342850
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||| ||   |||||||||||||||||||| |    
T  35342738 aaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtagtccagttcttccccaattcaaaaaac 35342837  T
Q  307 ttcaaaccctaat 319  Q
    || ||||||||||    
T  35342838 ttaaaaccctaat 35342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 48850929 - 48851001
Alignment:
Q  247 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| || |||||  ||  || |||||||||||||||||||| ||| ||||||||||    
T  48850929 caaaattcccaaaatttcttccattaattgatgccaaagttcttccccaattcaaaaaacttaaaaccctaat 48851001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 320
Target Start/End: Original strand, 23904917 - 23905052
Alignment:
Q  186 ctctttcttcctc-aaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||||||||| | ||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  23904917 ctctttcttcccccaaatatataaatttggaaccctaatgttataatttgtcaactagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 23905016  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaata 320  Q
    |||||||||||||||||||| ||| |||||||||||    
T  23905017 gttcttccccaattcaaaaaacttaaaaccctaata 23905052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 3920847 - 3920964
Alignment:
Q  50 tgttaacggtgcagacgtgacc-gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 148  Q
    |||||||||||| ||||||  | ||||||||||||||||  ||| ||| ||| |||| ||| ||||| |||||||| || |||| ||||| ||||||||     
T  3920847 tgttaacggtgctgacgtgggcagttaacctctcacatgtcttgtcatgtcaaatgctacacaagcacagactaatatgatcgaaagtga-caaaatttt 3920945  T
Q  149 caaggatcaaattaattga 167  Q
    ||||||| ||||| |||||    
T  3920946 caaggatgaaattgattga 3920964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 6605162 - 6605032
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |||     
T  6605162 tttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatgttt 6605063  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||| ||| ||||||||||    
T  6605062 ttccccaattcaaaaaacttaaaaccctaat 6605032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 12904026 - 12903939
Alignment:
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgtt 376  Q
    ||||||||||| |||| | ||||||||||||        |||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  12904026 ttccccaattctaaaaacgtcaaaccctaatttgtttttattgaacccgaaatccaaagtctccaaaatttcttcaagcaaaattgtt 12903939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 13169435 - 13169302
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||| ||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  13169435 gctctttcttccccaaatatataaatttgga-ccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 13169337  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  13169336 gttcttccccaattcaaaaaacttaaaaccctaat 13169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 39857999 - 39858133
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  39857999 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 39858098  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  39858099 gttcttcaccaattcaaaaaacttaaaaccctaat 39858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 47384608 - 47384738
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||| |||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||| |||| ||  ||||  ||  || ||||    
T  47384608 tttcttccccaattatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatgtcttccatgaattgatgtcaaagttc 47384707  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||| ||| ||||||||||    
T  47384708 ttccccaattcaaaaaacttaaaaccctaat 47384738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 12904101 - 12904046
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatcta 241  Q
    ||||||||||  ||||| || |||||| |||||||||||||||||| |||||||||    
T  12904101 ctctttcttctccaaatctataaaatttgaaccctaattttacaatctgtaatcta 12904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 48311543 - 48311427
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| |   |||||||| |||||||| ||| ||| | ||| | | |||||| | |||||||||||||| |||||  ||  || |    
T  48311543 ctctttcttccccaaatatatat--ttggaaccttaattttataatttgtcacctagaattcaaaatcctcaaaatttctttcattaattgatgacaaag 48311446  T
Q  286 ttcttccccaattcaaaaa 304  Q
    |||||||||||||||||||    
T  48311445 ttcttccccaattcaaaaa 48311427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 3690247 - 3690317
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||  ||||| |||  |||| |||||||| || ||||||| |||||||||||||||||    
T  3690247 gtcaatcaagttagtccttctattcaaacggagcgttaacggggctgacgtgatcgttaacctctcacatg 3690317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 3921007 - 3921096
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 275  Q
    |||||||||||| | ||| || ||||||| |||| ||||| |||||| ||||||||| | | |||||| ||||||||||||| || |||||    
T  3921007 gctctttcttccccgaatctataaaattgaaacc-taattctacaatctgtaatctatagtacaaaatccccaaaatttcttccattaatt 3921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 8421867 - 8421921
Alignment:
Q  352 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 406  Q
    ||||||||||| ||||||||   || || ||||||||||||||||||||||||||    
T  8421867 caaaatttcttgaagcaaaacgcttgaaattgaatctgaaatgatgaggggtggg 8421921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 47339902 - 47339943
Alignment:
Q  46 ggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||||||| || |||||||| ||||||||||||||||    
T  47339902 ggagtgttaacggggctgacgtgactgttaacctctcacatg 47339943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 22155626 - 22155495
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22155626 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22155528  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaa 318  Q
    ||||||||||||||||||| ||| |||||||||    
T  22155527 ttcttccccaattcaaaaaacttaaaaccctaa 22155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 22211541 - 22211410
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22211541 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22211443  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaa 318  Q
    ||||||||||||||||||| ||| |||||||||    
T  22211442 ttcttccccaattcaaaaaacttaaaaccctaa 22211410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 38472573 - 38472705
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    ||||| |||| |||||||| ||| |||||||| |||| ||| ||| ||| | ||| | | |||||| |||  |||||||| ||  ||||  ||  || ||    
T  38472573 tctttattccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccgaatttcttccatgaattgatgtcaatgt 38472672  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||| ||| ||||||||||    
T  38472673 tcttccccaattcaaaaaacttaaaaccctaat 38472705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 8e-87; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 17 - 319
Target Start/End: Original strand, 11031526 - 11031828
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||  |||||||   ||||||||| ||  || ||| |||||||||||||||||||||  |||| ||||||| |||| ||||||    
T  11031526 gtcaatcaatttagtccctccgtccaatttaggtgttaacgatgttgatgtggccgttaacctctcacatgggtctccatgtcagatgtcacataagcag 11031625  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatacaaaattggaa 216  Q
    |||||||| ||| ||| |||||||||||||||||||||  ||||| ||||||||| | |||||| |||||| |||||||| |||||||| ||||||||||    
T  11031626 agactaatttggccgatagtgaccaaaatttccaaggactaaatttattgatttgcataaaatgttttgctttttcttccccaaatatataaaattggaa 11031725  T
Q  217 ccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccct 316  Q
     |||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  11031726 gcctaattttacaatctataatctacactccaaaatccccaaaatttcttccaataattagtggtaacgttcttccctaattcaaaaaacttcaaaccct 11031825  T
Q  317 aat 319  Q
    |||    
T  11031826 aat 11031828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 40019448 - 40019748
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||  ||||| |||||| |||||||||  ||| ||||||    
T  40019448 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacaccccaaaatctccaaattttcttccaataattaagggtcacgttc 40019547  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  40019548 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 40019647  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  40019648 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 40019747  T
Q  489 g 489  Q
    |    
T  40019748 g 40019748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 186 - 397
Target Start/End: Original strand, 25356622 - 25356834
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| |||| |||||| |||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  25356622 ctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaatcaccaaaatttcttccaataataagtggtaacg 25356721  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    ||||||||||||||||||| ||||||||||||| |        |||||||| ||||| ||||||| |||||||||||| |||||||| | || || ||||    
T  25356722 ttcttccccaattcaaaaaacttcaaaccctaatttcttttttattgaatctgaaatccaaaatccccaaaatttcttgaagcaaaactattgaaattga 25356821  T
Q  385 atctgaaatgatg 397  Q
    ||| |||||||||    
T  25356822 atcagaaatgatg 25356834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 185 - 495
Target Start/End: Original strand, 33369050 - 33369362
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||||||||||||||||||  | ||| || |||||||||||||||||  |||||| ||||| ||||||| ||||||       
T  33369050 gctctttcttccccaaatatataaaattggaaccctaattacataatctgcaatctacactccaaaatcaccaaaacttcttccaataataagtggtcca 33369149  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 382  Q
    |||||||||||||||||||| |||||||||| ||  |        |||||||| ||||  ||||||  |||||| ||||| |||||||| | || || ||    
T  33369150 gttcttccccaattcaaaaaacttcaaacccgaattttttttcttattgaatctgaaagccaaaattcccaaaacttcttgaagcaaaactattgaaatt 33369249  T
Q  383 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 482  Q
    ||||||||||||||| |  |||||  || | | |||| |  ||||||||||  ||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  33369250 gaatctgaaatgatgggacgtgggaatatgagaaaaaacggttatgaaagttgagctttatcttcaagctccaaatttaatggtgatgtgagagcgcttg 33369349  T
Q  483 aatgttgatgtcc 495  Q
    ||||||| |||||    
T  33369350 aatgttggtgtcc 33369362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 198 - 489
Target Start/End: Original strand, 28432520 - 28432810
Alignment:
Q  198 caaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 297  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||||||||||     
T  28432520 caaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttcttccccaaa 28432619  T
Q  298 tcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatg 397  Q
    |||||||  | |||||| || |        |||||||| ||||  |||||||  |||||||  ||||||||||  |||| || |||||||| ||||||||    
T  28432620 tcaaaaaattgcaaaccgtatttttttttaattgaatctgaaaaccaaaatctacaaaattcattcaagcaaatctgttgaaattgaatctaaaatgatg 28432719  T
Q  398 aggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 489  Q
     |||||||   || ||||||||  |  ||  ||||||||| || ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  28432720 -ggggtggtcatatgggcaaaaagagctaccaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 28432810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 17 - 319
Target Start/End: Complemental strand, 10269525 - 10269206
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    ||||| ||||||| || |||  ||||||| | ||||||||||||| || ||| |||||||||| ||||||| ||  |||| ||||||| |||| ||||||    
T  10269525 gtcaaccaatttattccctccgtccaatttgggtgttaacggtgctgatgtgcccgttaacctttcacatgagtctccatgtcagatgtcacacaagcag 10269426  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaa---------------- 200  Q
     ||||||| ||| | | ||||||||||||||  || ||  ||||| ||||||||| | |||||| |||||| |||||||| |||                    
T  10269425 ggactaatttggcc-atagtgaccaaaatttttaaagactaaattgattgatttgcataaaatgttttgctttttcttccccaacagctatttctttccc 10269327  T
Q  201 --atatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaatt 298  Q
      ||||| |||||||||| |||||||||||||| |  ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  10269326 aaatatataaaattggaagcctaattttacaatctacaatctacacaccaaaatccccaaaatttcttccaataattagtggtaacgttcttccccaatt 10269227  T
Q  299 caaaaagcttcaaaccctaat 319  Q
    |||||| |||||||| |||||    
T  10269226 caaaaaacttcaaacgctaat 10269206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 186 - 495
Target Start/End: Complemental strand, 9876361 - 9876053
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||| | || ||||||| |||||||||| |||||| || ||||||||||| | |||  | |||||||| | ||||||| ||||||   |    
T  9876361 ctctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctataatcacaaaaatttcctccaataataagtggtccag 9876262  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    |||| |||||||||||||| ||||||||||||||        | |||||| ||||  |||||||  |||||||| || |||||||| | || || |||||    
T  9876261 ttctgccccaattcaaaaaacttcaaaccctaattttttcgtagtgaatctgaaagccaaaatcctcaaaattttttgaagcaaaactattgaaattgaa 9876162  T
Q  386 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 485  Q
    |||||||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| | |||||| ||||||||||  ||||||| |||||||||    
T  9876161 tctgaaatgatg-ggggtgggaatatgggaaaaaactgttatgaaagtcaagcttcatcttcaggctccaagtttaatggtattgtgagaatgcttgaat 9876063  T
Q  486 gttgatgtcc 495  Q
    |||| |||||    
T  9876062 gttggtgtcc 9876053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 185 - 475
Target Start/End: Original strand, 461467 - 461756
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||||||| | || ||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | |  |||| ||||||       
T  461467 gctctttcttcctcaattgtataaaattgtaaccctaattacacaatctccaatctacactccaaaatcaccaaaatttcctcctgtaataagtggtcca 461566  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||||||| || || ||||| | || || ||||    
T  461567 gttcttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaattt-ttgaaacaaaactattgaaattga 461665  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 475  Q
    ||||||||||||| || |||||  || ||| | || || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  461666 atctgaaatgatggggtgtgggaatatgggaagaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 461756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 189 - 475
Target Start/End: Original strand, 33158951 - 33159236
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||| | || ||||||| ||||||||||  ||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  33158951 tttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactccaaaatcaccaaaatttcctccagtaataagtggttcggttc 33159050  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||| ||| || |||||||| | || || ||||||||    
T  33159051 ttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaatttttttgaagcaaaactattgaaattgaatct 33159150  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 475  Q
    ||||||||  ||||||||  | | || ||||||| ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||    
T  33159151 gaaatgatagggggtgggaat-atggaaaaagcagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgaga 33159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 9186432 - 9186302
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||||||||| ||  ||||||||| |||||||||||| ||||||||    
T  9186432 tttcttccccaaatatttaaaattgaaaccctaattttacaatctgtaatctacactccaaaatcccataaatttcttccaataattagtgataacgttc 9186333  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    || ||||||||||||| ||| ||||||||||    
T  9186332 ttacccaattcaaaaaactttaaaccctaat 9186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 186 - 484
Target Start/End: Original strand, 38881691 - 38881992
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| |||||||||||| |||||  |||||||| ||| ||||||||||||   || ||||||||| ||||||| ||||||   |    
T  38881691 ctctttcttccccaaatatataaaattggaaccttaattacacaatatgcaatgtacactccaaaaccacccaaatttcttccaataataagtggtccag 38881790  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    ||||||||||||||||||| ||| ||||||||||          | | ||  |||  |||||||  ||||||||||| |||||||| | || || |||||    
T  38881791 ttcttccccaattcaaaaaacttgaaaccctaattttttttttcttattctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 38881890  T
Q  386 tctgaaatgatgagg-ggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg--tgagagtgcttg 482  Q
    |||||||||||| || |||| |  || ||| |||| |||||||||||||| ||||| ||||| |||||||| |||||| |||||||  ||||||||||||    
T  38881891 tctgaaatgatggggaggtgagaatatgggaaaaaacaattatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatgtatgagagtgcttg 38881990  T
Q  483 aa 484  Q
    ||    
T  38881991 aa 38881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 9186639 - 9186451
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||  | |||||   |||||||||||   |||||| |||||||||||||||||||||  |||| ||| ||| |||| ||||||    
T  9186639 gtcaatcaatttagtccctccgttcaatttaggtgttaacggtaatgacgtggccgttaacctctcacatgggtctccatgtcaaatgtcacacaagcag 9186540  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatata 205  Q
    |||||||| ||| ||| |||||||||||||||||| ||  ||||| ||||||||| ||||||||  |||||||||||||| ||||||||    
T  9186539 agactaatttggccgatagtgaccaaaatttccaatgactaaattgattgatttgcagaaaatgacttgctctttcttccccaaatata 9186451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 71 - 319
Target Start/End: Original strand, 10267957 - 10268223
Alignment:
Q  71 cgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgattt 170  Q
    |||||| |||||| ||||||  |||| |||||||||||| |||||||||||||| |||  || |||||||| ||||||||| ||  ||||| ||||||||    
T  10267957 cgttaatctctcatatgggtctccatgtcagatgccacacaagcagagactaatttggctgatagtgaccataatttccaatgactaaattgattgattt 10268056  T
Q  171 gtagaaaatgctttgctctttcttcctcaa------------------atatacaaaattggaaccctaattttacaatatgtaatctacactccaaaat 252  Q
       ||||||| |||||||||||||||||||                  ||||| | |||||||||||||||||| |||| | ||||||||||||||||||    
T  10268057 actgaaaatgttttgctctttcttcctcaacgactatttcttccccaaatatatagaattggaaccctaatttttcaatctataatctacactccaaaat 10268156  T
Q  253 tcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 319  Q
     ||| ||||||||| ||||||||||| ||||| ||||||||||||  ||| | ||||||||||||||    
T  10268157 cccccaaatttcttccaataattagtagtaacattcttccccaatgtaaataacttcaaaccctaat 10268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 419
Target Start/End: Complemental strand, 44620472 - 44620244
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||| ||||| |||||||||||||||| ||||    
T  44620472 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcacaaaaattcttccaataattagtggtaatgttc 44620373  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 387  Q
    || ||||||| ||| | | ||||||||||||        ||||||| | ||||   |||||| |||||||| |||||| ||||| ||||  | |||||||    
T  44620372 tt-cccaattgaaataacctcaaaccctaat-ttttttgattgaattcaaaataaaaaaatctccaaaattccttcaaacaaaactgttgtaattgaatc 44620275  T
Q  388 tgaaatgatgaggggtgggtgtaagggcaaaa 419  Q
    |||||||||| ||||||||||||  |||||||    
T  44620274 tgaaatgatg-ggggtgggtgtatcggcaaaa 44620244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 185 - 470
Target Start/End: Complemental strand, 1322115 - 1321829
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || ||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  1322115 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggttca 1322016  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    |||||||||||||||||||| ||| ||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  1322015 gttcttccccaattcaaaaaacttgaaaccctaatttttttcgtattgaatatgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattg 1321916  T
Q  384 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    |||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  1321915 aatctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 1321829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 10770636 - 10770768
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||||| || ||||||||| ||||||||||||||| |||||||  ||||||||||| |||||||||||||| | |||||| ||  |||    
T  10770636 gctctttcttccccaaatctataaaattggagccctaattttacaatctgtaatccgcactccaaaatccccaaaatttctttaattaattaatgacaac 10770735  T
Q  285 gttcttccccaattcaaaaagcttcaaacccta 317  Q
    ||| |||| |||||| |||| ||||||||||||    
T  10770736 gtttttcctcaattctaaaaacttcaaacccta 10770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 12515395 - 12515499
Alignment:
Q  214 gaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaac 313  Q
    ||||| |||||||||||| | |||||||||||||||||| ||||||||||| |||  ||||||| | |||||||||||||| ||||||||| ||||||||    
T  12515395 gaaccgtaattttacaatctttaatctacactccaaaatccccaaaatttc-ttccctaattagcgataacgttcttccccgattcaaaaaacttcaaac 12515493  T
Q  314 cctaat 319  Q
    ||||||    
T  12515494 cctaat 12515499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 25373440 - 25373335
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||||||||||||  ||||||||||||| ||| | | |||||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25373440 ctctttcttcctcaaatatatgaaattggaaccctgattgtgctatatgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25373341  T
Q  286 ttcttc 291  Q
    ||||||    
T  25373340 ttcttc 25373335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 25705571 - 25705652
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 266  Q
    |||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||    
T  25705571 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaatcaccaaaatttctt 25705652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 352 - 495
Target Start/End: Original strand, 33748793 - 33748935
Alignment:
Q  352 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 451  Q
    ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| ||||    
T  33748793 caaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagc 33748891  T
Q  452 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||    
T  33748892 tccaagtttaatagtgttgtgagagtgcttgaatgttggtgtcc 33748935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 440
Target Start/End: Original strand, 42895061 - 42895317
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || || |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| |||| |||| || | ||||       
T  42895061 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcttccaattataaatggtcca 42895160  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    |||||||||||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  42895161 gttcttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 42895260  T
Q  384 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctt 440  Q
    |||||||||||||| ||||||||  || ||| |||| || | ||||||||| |||||    
T  42895261 aatctgaaatgatggggggtgggaatatgggaaaaaacagtcatgaaagtcgagctt 42895317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 15684048 - 15684178
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||||||||||| ||||||||||| ||||||||| | | ||||||||| |||||||||| || |||||  ||  |||||||    
T  15684048 tttcttccccaaatctataaaattggaaccccaattttacaatctgtaatctagagttcaaaattccaaaaatttcttccattaattgatgacaacgttc 15684147  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||| ||||  |||||| ||||||    
T  15684148 ttccccaattctaaaaatttcaaaacctaat 15684178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 292
Target Start/End: Complemental strand, 25402610 - 25402504
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25402610 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25402511  T
Q  286 ttcttcc 292  Q
    |||||||    
T  25402510 ttcttcc 25402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 292
Target Start/End: Complemental strand, 25707119 - 25707013
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25707119 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25707020  T
Q  286 ttcttcc 292  Q
    |||||||    
T  25707019 ttcttcc 25707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 304
Target Start/End: Original strand, 11719746 - 11719865
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||||| || ||||||||||||| ||||||||||| | | | ||| | |||||||| ||||||||||||| || |||||  ||  |||    
T  11719746 gctctttcttccccaaatctataaaattggaaccccaattttacaatttatcacctagagtccaaaatccccaaaatttcttccattaattgatgacaac 11719845  T
Q  285 gttcttccccaattcaaaaa 304  Q
    ||||||||||||||||||||    
T  11719846 gttcttccccaattcaaaaa 11719865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 25370798 - 25370865
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaat 252  Q
    |||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  25370798 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaat 25370865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 38884807 - 38884665
Alignment:
Q  41 caattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgacc 140  Q
    ||||||| ||||||||||||| || |||||||||||||| ||||||| |||| ||| ||||||| |||| ||  ||| |||||| ||||||| | ||||     
T  38884807 caattggggtgttaacggtgctgatgtgaccgttaacctatcacatgagttgtcatgtcagatgtcacataaatagaaactaatttggtcgataatgaca 38884708  T
Q  141 aaaatttccaaggatcaaattaattga-tttgtagaaaatgct 182  Q
    |||| || ||||||| ||||| ||||| |||| ||||||||||    
T  38884707 aaaaatttcaaggatgaaattgattgattttgcagaaaatgct 38884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 17807313 - 17807446
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||||||||||||||||| ||| ||| | ||| | | |||||| ||||||| ||||| || |||||  ||  |||     
T  17807313 ctctttcttccacaaatatataaatttggaaccctaattttataatttgtcacctagagttcaaaatccccaaaaattcttccattaattgatgacaaca 17807412  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||||||| ||||||    
T  17807413 ttcttccccaattcaaaaaacttcaaaacctaat 17807446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 473
Target Start/End: Complemental strand, 25371781 - 25371636
Alignment:
Q  328 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 427  Q
    |||||||| ||||| |||||||   ||||||| ||  ||||||| | || || ||||||| ||||||||||||||||||  || ||| |||| || ||||    
T  25371781 attgaatctgaaatccaaaatccaaaaaatttattgcagcaaaactattgaaattgaatccgaaatgatgaggggtgggcatatgggaaaaaacagttat 25371682  T
Q  428 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtga 473  Q
    ||| ||| ||||| ||||| |||||||| |||||||||||||||||    
T  25371681 gaatgtcgagcttcatcttcaagctccaagtttaatggtgatgtga 25371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 495
Target Start/End: Complemental strand, 31823276 - 31822975
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||| |  |||||||||||||       
T  31823276 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttcctcaaataattagtggttca 31823177  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 382  Q
    ||||| |||||||||||||| |||||||||||||  |        | ||||||  |||  |||||||  ||||||||||| |||||||| | || || ||    
T  31823176 gttctgccccaattcaaaaaacttcaaaccctaattttttttcgtagtgaatctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaa-tt 31823078  T
Q  383 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 482  Q
    ||||||||||||||| ||||||||  || ||| |||| |  ||||||||          ||||| || ||||| ||||||||||| ||||||||||||||    
T  31823077 gaatctgaaatgatgtggggtgggaatatgggaaaaaacggttatgaaa----------atcttcaaactccaagtttaatggtgttgtgagagtgcttg 31822988  T
Q  483 aatgttgatgtcc 495  Q
    ||||||| |||||    
T  31822987 aatgttggtgtcc 31822975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 319
Target Start/End: Complemental strand, 11790627 - 11790496
Alignment:
Q  188 ctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 287  Q
    ||||||||||||||| || |||| ||||||| | |||||||||| ||| ||||| | |||||||| ||||||||||||| || |||||  ||  ||| ||    
T  11790627 ctttcttcctcaaatctataaaaatggaaccttgattttacaatttgttatctatagtccaaaatccccaaaatttcttccattaattgatgacaacctt 11790528  T
Q  288 cttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||| ||||| |||| ||||||| ||||||    
T  11790527 cttcccaaattctaaaaacttcaaaacctaat 11790496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 32824072 - 32823938
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | |  ||||||||||||||||||  ||||| || ||||||||||  |||||  || ||||||| | ||||||| ||||||       
T  32824072 gctctttcttccccaattgtttaaaattggaaccctaattacacaatctgcaatctacactataaaatcgcctaaatttcctccaataataagtggttca 32823973  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||| |||||||||||||||| ||||||||||||||    
T  32823972 gtttttccccaattcaaaaaacttcaaaccctaat 32823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 12515181 - 12515251
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    |||||||||||||||| |||  | ||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  12515181 gtcaatcaatttagtccctccgttcaattggagtgttaacggtgctgacgtggccgttaagctctcacatg 12515251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 475
Target Start/End: Original strand, 37525333 - 37525418
Alignment:
Q  390 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 475  Q
    |||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  37525333 aaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 37525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 8655752 - 8655640
Alignment:
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  8655752 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 8655653  T
Q  385 atctgaaatgatg 397  Q
    |||||||||||||    
T  8655652 atctgaaatgatg 8655640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 304
Target Start/End: Original strand, 24527184 - 24527303
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || ||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  24527184 gctctatcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 24527283  T
Q  285 gttcttccccaattcaaaaa 304  Q
    ||||||||||||||||||||    
T  24527284 gttcttccccaattcaaaaa 24527303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 37525149 - 37525267
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||||| |||| ||| | || ||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | || |||| ||||||       
T  37525149 gctctttattccccaattgtataaaattgtaaccctaattgcacaatcttcaatctacactccaaaatcaccaaaatttcctccactaataagtggttca 37525248  T
Q  285 gttcttccccaattcaaaa 303  Q
    |||||||||||||||||||    
T  37525249 gttcttccccaattcaaaa 37525267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 41041032 - 41041166
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  41041032 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 41041131  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||| | ||| ||||||||||    
T  41041132 gttcttccccaattcaaataacttaaaaccctaat 41041166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 13484831 - 13484964
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| |||||||| |||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  13484831 ctctttcttccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 13484930  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  13484931 ttcttccccaattcaaaaaacttaaaaccctaat 13484964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 44620635 - 44620526
Alignment:
Q  45 tggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaa 144  Q
    |||||||||||||| || |||||| |||||||||||||||||||  |||||| ||||| |||| | |||||  ||||||| ||| |||  || ||||| |    
T  44620635 tggagtgttaacggagctgacgtggccgttaacctctcacatggactgccatgtcagacgccatataagcatggactaatatggccgattgtaaccaaca 44620536  T
Q  145 tttccaagga 154  Q
    ||| ||||||    
T  44620535 ttttcaagga 44620526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 37803621 - 37803549
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaa 123  Q
    ||||||||||  |||||| | |||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  37803621 gttaacggtgatgacgtggctgttaacatctcatatgggttgccatgtcagatgccacataagcagggactaa 37803549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 11719994 - 11720047
Alignment:
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||| |||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  11719994 atcttcaagctctatgcttaatggtgatgtgagagtacttgaatgttggtgtcc 11720047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 41824261 - 41824394
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| | | ||| ||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  41824261 ctctttcttccccaaatatatatatttgaaaccctaatgttataatttgtcacgtagagttcaaaatccccaaaatttcttccatgaattgatgtcaaag 41824360  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  41824361 ttcttccccaattcaaaaaacttaaaaccctaat 41824394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 44528167 - 44528062
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    ||||||||| |||||| ||   |||| |||| | ||||||||||  |||||| | |||||| ||||| |||||||| ||| |||||||||||| ||||||    
T  44528167 gtcaatcaaattagtccctacgtccatttggggcgttaacggtgatgacgtggctgttaacatctcatatgggttgtcatgtcagatgccacataagcag 44528068  T
Q  117 agacta 122  Q
     |||||    
T  44528067 ggacta 44528062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 31199797 - 31199909
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   |||||||| |||||||| || |    
T  31199797 aaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttcttcctcaattcaacaaac 31199896  T
Q  307 ttcaaaccctaat 319  Q
    || ||||||||||    
T  31199897 ttaaaaccctaat 31199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 33748647 - 33748759
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    |||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| ||||||||||||||      
T  33748647 aaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaaaaa 33748746  T
Q  307 ttcaaaccctaat 319  Q
    |||||||||||||    
T  33748747 ttcaaaccctaat 33748759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 15683899 - 15684005
Alignment:
Q  72 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttg 171  Q
    ||||||||||| || || ||||||| ||||||| |||| ||||||||| |||| | || || ||||| ||||||| ||||||   ||||| |||||||||    
T  15683899 gttaacctctcccaaggcttgccatgtcagatgtcacacaagcagagattaattttgtagaaagtga-caaaattgccaagggcgaaattgattgatttg 15683997  T
Q  172 tagaaaat 179  Q
     |||||||    
T  15683998 aagaaaat 15684005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 32823863 - 32823816
Alignment:
Q  423 attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    |||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  32823863 attatgaaagtcgagctttatcttcaagcttcaagtttaatggtgatg 32823816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 11790370 - 11790317
Alignment:
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||| |||||| || || ||||||||||||||||| ||||||||||| |||||    
T  11790370 atcttcaagctctatcttgaatggtgatgtgagagtacttgaatgttggtgtcc 11790317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 22273668 - 22273535
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  22273668 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 22273569  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||| || ||| ||| ||||||    
T  22273568 ttcttccccaattcaagaaacttaaaatcctaat 22273535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 319
Target Start/End: Complemental strand, 29694095 - 29693963
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    |||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| | ||| ||||||| ||  ||||  ||  || ||    
T  29694095 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccgcaagatttcttccatgaattgatgacaaagt 29693996  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||| |||||| ||||| ||| ||||||||||    
T  29693995 tcttctccaatttaaaaaacttaaaaccctaat 29693963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 42895321 - 42895353
Alignment:
Q  457 gtttaatggtgatgtgagagtgcttgaatgttg 489  Q
    ||||||||||| |||||||||||||||||||||    
T  42895321 gtttaatggtgttgtgagagtgcttgaatgttg 42895353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 7e-75; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 407
Target Start/End: Original strand, 30501214 - 30501610
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||| || ||||||||||          |||||||||||| |||||     
T  30501214 gtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtgaccgtcaatctctcacatg----------tcagatgccacacaagcaa 30501303  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg--ctttgctc---------------tttcttcctca 199  Q
    |||||||| |||  || |||||||||||||||||||||  ||||| ||||||||| ||||||||  |||| |||               ||||||||||     
T  30501304 agactaatttggctgatagtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatgttctttcctccccaacggctctatctttcttcctcc 30501403  T
Q  200 aatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattc 299  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30501404 aatatataaaattggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtacttccccaattc 30501503  T
Q  300 aaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgag 399  Q
    ||||| |  |||||||| ||        ||||||||||||| ||| | || | ||||||||||||||||||| ||||||| |||||||||||||||||      
T  30501504 aaaaaaccccaaaccct-atttttttttattgaatccgaaaatcagattccctaaaatttcttcaagcaaaactgttcaaattgaatctgaaatgatggt 30501602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 185 - 493
Target Start/End: Original strand, 26448037 - 26448342
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||| | ||||| |||||||||  || |||||||||| |||||||||||||||||    
T  26448037 gctctttcatcctcaaatatataaaattggaaccttaattttacaatattttatctatactccaaaa-ccctaaaatttcttccaataattagtggtaac 26448135  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    || ||| | ||||||||||| ||||||||||||||        ||||||||  |||  || |||  ||||||||||||||||||||| ||||||| ||||    
T  26448136 gtcctttctcaattcaaaaaacttcaaaccctaat-tttttttattgaatctaaaaaccagaatacccaaaatttcttcaagcaaaactgttcaaattga 26448234  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 484  Q
    |||||||||||||| |||||||  || ||||| ||  | |||| |||||||||||| | ||| ||||||||| ||||||||||||||||||||| |||||    
T  26448235 atctgaaatgatga-gggtgggcatatgggcacaaagagttatcaaagtcaagcttcaccttcaagctccatctttaatggtgatgtgagagtgtttgaa 26448333  T
Q  485 tgttgatgt 493  Q
    |||||||||    
T  26448334 tgttgatgt 26448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 28 - 393
Target Start/End: Complemental strand, 40963352 - 40962981
Alignment:
Q  28 tagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtg 127  Q
    ||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||| |||         || |||||||||| ||  || | ||||| ||    
T  40963352 tagtccctccatccaattggagtgttaacggtgctgacgtggccgttaacctctcatatg---------at-agatgccacataaagagtggctaatttg 40963263  T
Q  128 gtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg--ctttgctc---------------tttcttcctcaaatatacaaaa 210  Q
    | ||| ||| |||||||||||||| ||| ||||| ||||||||| ||||||||  |||| |||               |||||||| |||||||| ||||    
T  40963262 gccgatagtaaccaaaatttccaaagatgaaattgattgatttgcagaaaatgttctttcctccccaacggctctttatttcttccccaaatatataaaa 40963163  T
Q  211 ttggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttca 310  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||    
T  40963162 ttggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttcttacaataattagtggtaacgttcttccccaattcaaaaaaattca 40963063  T
Q  311 aaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaat 393  Q
    |||||||||        ||||||||||||   || ||||  |||||||||||||||||||||||||||| |||||||||||||    
T  40963062 aaccctaat-tttttttattgaatccgaataccagaatccacaaaatttcttcaagcaaaattgttcaaattgaatctgaaat 40962981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 1847462 - 1847154
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    |||||||||| ||||| || ||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||||| | ||||||  | ||||   ||    
T  1847462 tctttcttccccaaatgtataaaattggaaccctaattacacaatttgtaatctacacttcaaaatcaccaaaatttcatccaataaaaaatggttcagt 1847363  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    |||||||||||| ||||| || |||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || |  ||||||    
T  1847362 tcttccccaatttaaaaaactacaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgatattgaat 1847263  T
Q  387 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 486  Q
    ||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||    
T  1847262 ctgaaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgagagagcttgaatg 1847163  T
Q  487 ttgatgtcc 495  Q
    ||| |||||    
T  1847162 ttggtgtcc 1847154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 41945898 - 41945600
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  41945898 tttcttccccaaatatataaaattggaaccctaattttacgatgtgtaatctacactccaaaatctctaaattttcttccaataattaagggtcacgttc 41945799  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||| ||||||        |||||||| ||||  |||||||  ||||| || ||||||||||| |||| || ||||||||    
T  41945798 ttccccaaatcaaaaaattgcaaatcctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaa-ttattcaagcaaaactgttgaaattgaatct 41945701  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  41945700 aaaatgaaggggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 41945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 187 - 483
Target Start/End: Original strand, 32842721 - 32843017
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    |||||||||||||||| || |||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  32842721 tctttcttcctcaaatctataaaattggaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 32842820  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    ||||||  | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  32842821 tcttccttacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 32842920  T
Q  387 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 483  Q
      ||||||||| | |||||| ||| |||||| |  | || | |||||| ||||| ||||| || ||  ||||||||||||||||| ||| |||||||    
T  32842921 gcgaaatgatgggtggtgggcgtatgggcaacacaagttctcaaagtcgagcttcatcttcaaactttatgtttaatggtgatgtcagaatgcttga 32843017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 193 - 419
Target Start/End: Original strand, 49494787 - 49495011
Alignment:
Q  193 ttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttcc 292  Q
    |||| ||||| || |||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  49494787 ttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttcttcc 49494886  T
Q  293 ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaa 391  Q
    |||||||||| | | ||||||||||||        ||||||||||||||   |||||| | |||||| |||||| ||||| ||||  | |||||||||||    
T  49494887 ccaattcaaataacctcaaaccctaat--tttttgattgaatccgaaataaaaaaatcccgaaaattccttcaaacaaaactgttataattgaatctgaa 49494984  T
Q  392 atgatgaggggtgggtgtaagggcaaaa 419  Q
    |||||| |||||||||||| ||||||||    
T  49494985 atgatg-ggggtgggtgtatgggcaaaa 49495011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 185 - 486
Target Start/End: Complemental strand, 48635173 - 48634872
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || || |||||||||||||||  ||||| |  ||| ||||||| |||||  | ||||| || | |||| || | ||||       
T  48635173 gctctttcttccccaattgtataacattggaaccctaattacacaatctacaatttacactctaaaatcactaaaatatcctccaattataaatggtcca 48635074  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  48635073 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagtcaaaatcctcaaaatttcttaaagcaaaactattgaaattga 48634974  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 484  Q
    ||||||||||||| ||||||||  || ||  |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  48634973 atctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 48634874  T
Q  485 tg 486  Q
    ||    
T  48634873 tg 48634872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 185 - 474
Target Start/End: Original strand, 24382004 - 24382293
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||| ||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| |||| |||| |||| |       
T  24382004 gctctttcttccccaattgtataaagttgtaaccctaattacacaatcttcaatctacactccaaaatcaccaaaatttccttcagtaataagtgatcca 24382103  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||| ||||| ||||||||||||||        |||||||| |||| ||||||||  ||| |||| || |||||||| | || || ||||    
T  24382104 gttcttccccaattaaaaaatcttcaaaccctaattttttcgcattgaatctgaaagtcaaaatcctcaagattttttgaagcaaaactattgaaattga 24382203  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgag 474  Q
    ||||||||||||| ||||||||  || ||  |||| |  ||||||||||  | ||| ||||| |||||||| || |||||||||||||||    
T  24382204 atctgaaatgatggggggtgggaatatggaaaaaaactgttatgaaagtttaacttcatcttgaagctccaagtataatggtgatgtgag 24382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 37865676 - 37865791
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||  ||||||||  ||| ||||||    
T  37865676 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttctaataattaagggtcacgttc 37865775  T
Q  289 ttccccaattcaaaaa 304  Q
    |||||||| |||||||    
T  37865776 ttccccaaatcaaaaa 37865791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 5127407 - 5127289
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcca 150  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||| || |||||| ||||||||||    
T  5127407 gttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgccacataagcagggactaaattggttgatagtgacaaaaatttcca 5127308  T
Q  151 aggatcaaattaattgatt 169  Q
    ||||  ||||| |||||||    
T  5127307 aggacaaaattgattgatt 5127289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 5134662 - 5134544
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcca 150  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||| || |||||| ||||||||||    
T  5134662 gttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgccacataagcagggactaaattggttgatagtgacaaaaatttcca 5134563  T
Q  151 aggatcaaattaattgatt 169  Q
    ||||  ||||| |||||||    
T  5134562 aggacaaaattgattgatt 5134544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 207 - 466
Target Start/End: Original strand, 31885830 - 31886088
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||| ||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||||||   |||||||||||||| ||||| |    
T  31885830 aaaattggaactctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtggttcagttcttccccaattgaaaaaac 31885929  T
Q  307 ttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 406  Q
    |||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||| | | || || |||||||| |||||| | ||||||||    
T  31885930 ttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattgaatctaaaatgacg-ggggtggg 31886028  T
Q  407 tgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggt 466  Q
      || ||| |||| || ||||||||||| ||||| ||||| ||| |||| ||||||||||    
T  31886029 aatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagatccaagtttaatggt 31886088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 33112233 - 33112441
Alignment:
Q  287 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    |||||||||||||||||| |||||||||||||         |||||||  |||  ||||||||   |||||||||| |||||||| | || || ||| ||    
T  33112233 tcttccccaattcaaaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatccttaaaatttcttgaagcaaaactattgaaattggat 33112331  T
Q  387 ctgaaatgatgagggg-tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 485  Q
    ||||||||||| |||| ||||  || ||| |||| || ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||    
T  33112332 ctgaaatgatgggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgagagtgcttgaat 33112431  T
Q  486 gttgatgtcc 495  Q
    |||| |||||    
T  33112432 gttggtgtcc 33112441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 361 - 489
Target Start/End: Original strand, 37886239 - 37886367
Alignment:
Q  361 ttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgttt 460  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||    
T  37886239 ttcaagcaaaactgttgaaattgaatctaaaatgatgaggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgttt 37886338  T
Q  461 aatggtgatgtgagagtgcttgaatgttg 489  Q
    |||||||||||||||||||||||||||||    
T  37886339 aatggtgatgtgagagtgcttgaatgttg 37886367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 489
Target Start/End: Complemental strand, 23775353 - 23775149
Alignment:
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    ||||||||||| |||||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  23775353 gttcttccccacttcaaaaaacttcaaaccctaattttttcgtatttaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 23775254  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 484  Q
    ||||||||||||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||  ||||| | ||| ||||||| ||||||||||||||||    
T  23775253 atctgaaatgatgggggatgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcgagctctaagttcaatggtgttgtgagagtgcttgaa 23775154  T
Q  485 tgttg 489  Q
    |||||    
T  23775153 tgttg 23775149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 2975749 - 2975883
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| |||||||||||  |||||  ||||| |  | |||||||||||||||  |||||||||||| ||||||| || |||       
T  2975749 gctctttcttccccaaatatataaaattggaactttaattacacaatcttcattctacactccaaaatcaccaaaatttcttccaataataagcggtcca 2975848  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||||||||||||||    
T  2975849 gttcttccccaattcaaaaaacttcaaaccctaat 2975883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 298
Target Start/End: Complemental strand, 33051253 - 33051144
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||| |||||| ||||| |||||||| ||||| ||||||||||||| ||||||  |||| ||||||||||||||||| |||    
T  33051253 tttcttccccaaatgtataaaataggaaccataattatacaatatttaatccacactccaaaatttccaaaaaatcttccaataattagtggtaacattc 33051154  T
Q  289 ttccccaatt 298  Q
    ||||||||||    
T  33051153 ttccccaatt 33051144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 343 - 495
Target Start/End: Original strand, 45897487 - 45897640
Alignment:
Q  343 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaag-caattatgaaagtcaagcttt 441  Q
    |||||||  ||||||||||| |||||||| | || || |||||| |||||||||| ||||||||  || ||| ||||  |  |||| ||||||||||||     
T  45897487 caaaatcctcaaaatttcttgaagcaaaactattgaaattgaatatgaaatgatgtggggtgggaatatgggaaaaaaacggttataaaagtcaagcttc 45897586  T
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  45897587 atcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 45897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 495
Target Start/End: Original strand, 35861831 - 35862141
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatt-tctttcaataattagtggtaa 283  Q
    |||||||||||| ||||| || ||||||| |||||||||| || ||| ||||||||| | |||||||| ||||||| | |||| |  |||||  ||  ||    
T  35861831 gctctttcttccccaaatctataaaattgaaaccctaattataaaatttgtaatctatagtccaaaatccccaaaaatatcttcctttaattgatgacaa 35861930  T
Q  284 cgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaa-atcaccaaaatttcttcaagcaaaattgttcaattt 382  Q
    | |||||||||| || ||||| |||| || |||| |        ||||||||||||||||||| ||| |||||||| |||||||      ||||||  ||    
T  35861931 cattcttccccatttaaaaaa-cttctaaacctatt-tttttttattgaatccgaaattcaaagatccccaaaattccttcaagttttggtgttcaggtt 35862028  T
Q  383 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 482  Q
    ||||||||||||||| | |||||  ||| |||||||| ||||||| |||||  |  || ||||| |||||| |||||||||||||||||||||||| |||    
T  35862029 gaatctgaaatgatgggtggtggacgtatgggcaaaaacaattatcaaagttgattttcatcttcaagctctatgtttaatggtgatgtgagagtgtttg 35862128  T
Q  483 aatgttgatgtcc 495  Q
    | ||||| |||||    
T  35862129 agtgttggtgtcc 35862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 495
Target Start/End: Original strand, 2975887 - 2976024
Alignment:
Q  357 tttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccat 456  Q
    |||||| |||||||| | || || |||||||||||||||| |||||||||  || ||| |||| || |||| |||||| ||||| ||||| ||| ||||     
T  2975887 tttcttgaagcaaaactattgaaattgaatctgaaatgataaggggtgggaatatgggaaaaa-cagttatcaaagtcgagcttcatcttcaagttccaa 2975985  T
Q  457 gtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  2975986 gtttaatggtgatgtgagattgcttgaatgttgttgtcc 2976024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 41625344 - 41625193
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 117  Q
    |||||||| |||||| ||  ||||| |||| ||||||| ||||  ||| ||  |||||||||||||||||||||||||| |||||||||||| ||||||     
T  41625344 tcaatcaaattagtccctacatccatttggggtgttaatggtgatgacatggtcgttaacctctcacatgggttgccatgtcagatgccacataagcagg 41625245  T
Q  118 gactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 169  Q
    ||||||  |||| || |||||| |||| || ||||||  ||||| |||||||    
T  41625244 gactaaattggttgatagtgacaaaaaatttcaaggacgaaattgattgatt 41625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 185 - 470
Target Start/End: Original strand, 18429030 - 18429314
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || ||||||| ||||||||||  ||||| || |||||| | || |||||  || ||||||| |  |||||| ||||||       
T  18429030 gctctgtcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctatattctaaaatcacctaaatttcctctaataataagtggtcca 18429129  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||| |||||| |||        |||||||| |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  18429130 gttcttccccaattcaaaaaacttgaaacccgaatttttttgtattgaatctgaaagtcaaaatctacaaaatttcttgaagcaaaactattgaaattga 18429229  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    || ||||||||   |||||| |  |||||| ||||    ||||||||||| ||||| ||||| |||||||| |||||| |||||||    
T  18429230 atttgaaatga-acggggtgagaataagggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatg 18429314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 470
Target Start/End: Original strand, 45255773 - 45256058
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || |||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45255773 gctctgtcttccccaattgtataaaatttgaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 45255872  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| || ||||| | || || ||||    
T  45255873 gttcttccccaattcaaaaaacttgaaaccctaat-ttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaaacaaaactattgaaattga 45255971  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagca--attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    ||||||||||| | |||||| |  || ||| ||||  |   ||||||||||| ||||| || || |||||||| ||||||||||||||    
T  45255972 atctgaaatgaag-ggggtgagaatatgggaaaaaaaattgttatgaaagtcgagcttcattttcaagctccaagtttaatggtgatg 45256058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 470
Target Start/End: Original strand, 33851294 - 33851555
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    |||||||||||| |||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||   ||||||||||||||||||||      
T  33851294 aaaattggaacc-taattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaaaat 33851392  T
Q  307 ttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 406  Q
    || ||||||||||        |||||||| ||||  |||||||  ||||||||||| ||| |||| | || || ||||||||||||||| | ||||| ||    
T  33851393 ttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagaaaaactattgaaattgaatctgaaatgaaggggggt-gg 33851491  T
Q  407 tgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
      |  ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  33851492 aatctgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 33851555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 17260752 - 17260655
Alignment:
Q  72 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 169  Q
    ||||||||||||||||| ||| ||| |||||||||||| ||| || ||||||| ||||| | |||||||||||||| ||||||  ||||| |||||||    
T  17260752 gttaacctctcacatggattgtcatgtcagatgccacataagtagggactaatttggtcaatagtgaccaaaattttcaaggacgaaattgattgatt 17260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 54094104 - 54094020
Alignment:
Q  70 ccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaagga 154  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||| |||||||   | |||| |||||| |||||||| |||||    
T  54094104 ccgttaacctctcacatgagttgccatgtcagatgccacataagcatagactaaatcgatcgatagtgacaaaaatttcaaagga 54094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 2378709 - 2378576
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  2378709 ctctttcttccccaaatatataaatttggaaccctaatattataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 2378610  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||| |||||||||| ||| ||||||||||    
T  2378609 ttcttccctaattcaaaaaacttaaaaccctaat 2378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 411
Target Start/End: Complemental strand, 10380713 - 10380511
Alignment:
Q  210 attggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttc 309  Q
    |||| ||||||||||  ||||| |||||| ||||||  |||||  ||||||| || | |||| || | ||||   |||||||||||||||||||| ||||    
T  10380713 attgaaaccctaattacacaatctgtaatttacactttaaaatctccaaaatatcctccaattataaatggtccagttcttccccaattcaaaaatcttc 10380614  T
Q  310 aaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtg 408  Q
    ||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||||||| |||| ||| ||||||||||    
T  10380613 aaaccctaatttttttcatattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctaaaatcatggggggtgggtg 10380514  T
Q  409 taa 411  Q
    |||    
T  10380513 taa 10380511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 23875963 - 23876095
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    |||||||||||  |||| ||||||||||||||||| ||||||  || ||| || || | | |||||||| ||||||||||| || |||||  ||  ||      
T  23875963 ctctttcttcccaaaatctacaaaattggaacccttattttatcatttgtcat-tagagttcaaaattctcaaaatttcttccattaattgatgacaatc 23876061  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||||||| ||||||    
T  23876062 ttcttccccaattcaaaaaacttcaaaacctaat 23876095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 42282268 - 42282135
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    |||||||||||  ||||||| ||| ||||||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  42282268 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgtcacatagaattcaaaatccccaaaatttcttccatgaattgatgccaaag 42282169  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  42282168 ttcttccccaattcaaaaaacttaaaaccctaat 42282135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 610984 - 610850
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||  |||||||| |||| ||| ||| ||| | | | | | || ||| ||||||||||||||||  ||||  ||  ||     
T  610984 gctctttcttccccaaatatataattttggaaccttaatgttataatttgtcaccaagagttcacaatccccaaaatttctttcatgaattgatgccaaa 610885  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  610884 gttcttccccaattcaaaaaacttaaaaccctaat 610850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 7589437 - 7589540
Alignment:
Q  83 acatgggttgccatatcagatgccacaga----agcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaa 178  Q
    |||||||||| ||| |||||||||||| |    ||||| ||||||| ||||||| | ||| |||||||||||| ||  ||||| ||||||||| ||||||    
T  7589437 acatgggttgtcatgtcagatgccacatatataagcagggactaatttggtcgataatgatcaaaatttccaatgacaaaattgattgatttgcagaaaa 7589536  T
Q  179 tgct 182  Q
    ||||    
T  7589537 tgct 7589540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 13466655 - 13466609
Alignment:
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  13466655 atcttgaagctctatgtttaatggtgatgtgagagtacttgaatgtt 13466609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 26447851 - 26447921
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    |||||||||||||||| ||| || ||||||||||||||| ||||| ||||||   |||||||| |||||||    
T  26447851 gtcaatcaatttagtctctccattcaattggagtgttaatggtgctgacgtggttgttaacctttcacatg 26447921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 33851079 - 33851149
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||| ||| | |||  |||| |||||||| || |||||||||||||||||||||||||    
T  33851079 gtcaatcaagttagtcattctgttcaaacggagcgttaacggggctgacgtgaccgttaacctctcacatg 33851149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 51686143 - 51686013
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||| ||  ||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  51686143 tttcttccccaaatatataaatttctaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgccaaagttc 51686044  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||| ||| ||||||||||    
T  51686043 ttccccaattcaaaaaacttaaaaccctaat 51686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 17516741 - 17516608
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||||||| ||||| ||| ||| ||||| ||| | | |||||| | | ||||||||| ||  ||||  ||  || |    
T  17516741 ctctttcttccccaaatatataaatttggaactctaatgttataatttgtaacctagagttcaaaatcctccaaatttcttccatgaattgatgtcaatg 17516642  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||| |||||||||| ||| ||||||||||    
T  17516641 ttcttccctaattcaaaaaacttaaaaccctaat 17516608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 30598658 - 30598791
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    |||||||| || |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  30598658 ctctttctaccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 30598757  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  30598758 ttcttccccaattcaaaaaacttaaaaccctaat 30598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 44268301 - 44268432
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||| ||  ||     
T  44268301 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattaatgtcaat 44268400  T
Q  285 gttcttccccaattcaaaaagcttcaaacccta 317  Q
    |||||| ||||||||||||| ||| ||||||||    
T  44268401 gttctttcccaattcaaaaaactt-aaacccta 44268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 23887489 - 23887622
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||||||| || |||||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  23887489 gctctttcttcc-caattgtataaaattgaaatcctaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttga 23887587  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||| ||||||||||||||  |||||||||||||    
T  23887588 gttctgccccaattcaaaaaatttcaaaccctaat 23887622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 27897512 - 27897646
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||  ||||||||| ||  ||||  ||  ||     
T  27897512 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatccctcaaatttcttacatgaattgatgtcaat 27897611  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||| ||||| ||| ||||| ||||    
T  27897612 gttcttccccaattaaaaaaacttaaaaccataat 27897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 33111938 - 33112008
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||  ||||| |||  |||| ||||| || || |||||||||||||||||||||||||    
T  33111938 gtcaatcaagttagtccttctattcaaacggagcgttaatggagctgacgtgaccgttaacctctcacatg 33112008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 18428873 - 18428914
Alignment:
Q  46 ggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    |||| |||||||| || |||||||||||||||||||||||||    
T  18428873 ggagcgttaacggggctgacgtgaccgttaacctctcacatg 18428914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 22218719 - 22218772
Alignment:
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||| ||| || |||| |||||||||||||||||| ||||||||||| |||||    
T  22218719 atcttcaagttctatgtctaatggtgatgtgagagtacttgaatgttggtgtcc 22218772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 41946088 - 41946023
Alignment:
Q  22 tcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||| ||| |||  ||||| ||||| ||||||||||| ||||||  |||||||||||||||||    
T  41946088 tcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatg 41946023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 311
Target Start/End: Original strand, 45897342 - 45897467
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||| | || |||||| |||||||||||  |||||||| ||||||||||| | |||    |||||||| | ||||||| |||| |   |    
T  45897342 ctctttcttccccaattgtataaaattagaaccctaattacacaatatgcaatctacactctataatcatgaaaatttcctccaataataagtgcttcag 45897441  T
Q  286 ttcttccccaattcaaaaagcttcaa 311  Q
    |||| | |||||||||||| ||||||    
T  45897442 ttctgctccaattcaaaaaacttcaa 45897467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 49494602 - 49494711
Alignment:
Q  45 tggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaa 144  Q
    |||||||||| ||| || || ||| ||||||||||||||||| |  |||||| ||| | |||||| |||||| ||||||| ||| |||  || ||||| |    
T  49494602 tggagtgttagcggagctgatgtggccgttaacctctcacattgactgccatgtcaaacgccacacaagcagggactaatatggccgattgtaaccaaca 49494701  T
Q  145 tttccaagga 154  Q
    ||| ||||||    
T  49494702 ttttcaagga 49494711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 11021825 - 11022125
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  11021825 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 11021924  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11021925 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11022024  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11022025 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 11022124  T
Q  489 g 489  Q
    |    
T  11022125 g 11022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 28247974 - 28247674
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  28247974 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 28247875  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  28247874 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 28247775  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  28247774 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 28247675  T
Q  489 g 489  Q
    |    
T  28247674 g 28247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 363485 - 363354
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  363485 tttcttccccaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacgttc 363386  T
Q  289 ttccccaattca-aaaagcttcaaaccctaat 319  Q
    ||| |||||||| |||| ||||||||||||||    
T  363385 ttctccaattcaaaaaaacttcaaaccctaat 363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 189 - 478
Target Start/End: Original strand, 11313127 - 11313402
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| |||||| |||||||||||||||||| | |||| ||||||||||||| |||| ||||             |||||||||||||    
T  11313127 tttcttccccaaatatataaaattagaaccctaattttacaatctttaatgtacactccaaaatccccacaatt-------------agtggtaacgttc 11313213  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||||| ||||| || |||||||| ||        |||||||||||||   | |||  ||||||||||||||||||||| ||||||| ||||||      
T  11313214 ttccccaattaaaaaaactccaaaccctcatttttttttattgaatccgaaaactagaattcccaaaatttcttcaagcaaaactgttcaaattgaatag 11313313  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtg 478  Q
     || ||||| ||||||||  || ||||||||  | | || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11313314 aaactgatg-ggggtgggcatatgggcaaaaagagtcatcaaagtcaagctttatcttcaagctccatgtttaatggtgatgtgagagtg 11313402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 38149836 - 38149535
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||  ||||| |||||| |||||||||  ||| |||||     
T  38149836 tttctttcccaaatatataaaattggaaccctaattttacaatgtgtaatctacactctaaaatctccaaattttcttccaataattaagggtcacgtta 38149737  T
Q  289 ttccccaattcaaaaagcttcaaaccct-aatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 387  Q
    |||||||| |||||||  | |||| ||| | |        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  38149736 ttccccaaatcaaaaaattgcaaatcctgatttttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 38149637  T
Q  388 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 487  Q
    | |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||| ||||| |||||    
T  38149636 taaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagaatgcttaaatgt 38149537  T
Q  488 tg 489  Q
    ||    
T  38149536 tg 38149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 7745062 - 7744932
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||| | ||||| || ||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  7745062 tttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttc 7744963  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||| ||| | | ||||||||||||    
T  7744962 ttccccaattgaaataacctcaaaccctaat 7744932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 494
Target Start/End: Original strand, 10715400 - 10715690
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||| | |||||||| ||  ||||||||||||||| ||| | ||||||||  |||||||    
T  10715400 tcttttttccccaaatatataaaattggaaccctaattttacaatctttaatctaccctaaaaaattcccaaaattccttccgataattagcagtaacgt 10715499  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    | || ||||||||||||| ||||||||||||||        ||||||||| |||   | |||| ||||||||||||||||||||| ||||||| ||||||    
T  10715500 tgtt-cccaattcaaaaaacttcaaaccctaat--ttttttattgaatccaaaaactagaatccccaaaatttcttcaagcaaaactgttcaaattgaat 10715596  T
Q  387 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 486  Q
      |||||||||  |||||||  || || |||||  | |||| ||||||             |||||||||||||||||||| ||||||||||||||||||    
T  10715597 tcgaaatgatg-cgggtgggcatatggacaaaaagagttatcaaagtc-------------aagctccatgtttaatggtgctgtgagagtgcttgaatg 10715682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 17948734 - 17948601
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||| | ||||| || ||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||| |||||||||    
T  17948734 ctctttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattggtggtaacg 17948635  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||| ||| | | ||||||||||||    
T  17948634 ttcttccccaattgaaataacctcaaaccctaat 17948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 489
Target Start/End: Complemental strand, 37418569 - 37418263
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || || |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||       
T  37418569 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtcca 37418470  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    ||||||| |||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  |||| |||||| |||||||| | || || |||    
T  37418469 gttcttcgccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaagtttcttgaagcaaaactattgaaattg 37418370  T
Q  384 aatctgaaatgatgaggggtgggtgtaagg-gcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 482  Q
    |||||||||||||| ||||||||  || ||   |||| || ||||||||||| || || |||||  |||| || ||||||||||| ||||||||||||||    
T  37418369 aatctgaaatgatggggggtgggaatatggaaaaaaaacagttatgaaagtcgagtttcatcttcgagcttcaagtttaatggtgttgtgagagtgcttg 37418270  T
Q  483 aatgttg 489  Q
    |||||||    
T  37418269 aatgttg 37418263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 200
Target Start/End: Complemental strand, 363653 - 363509
Alignment:
Q  50 tgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcc 149  Q
    |||||||||||| |||||||| |||||||||| |||| ||||  ||| ||||||| |||| |||||  ||||||| ||| ||| |||||||||||||| |    
T  363653 tgttaacggtgctgacgtgactgttaacctcttacataggttttcatgtcagatgtcacacaagcatggactaatttggccgatagtgaccaaaattttc 363554  T
Q  150 aaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaa 200  Q
    |||||       |||||||||| |||||||| |||||||||||||||||||    
T  363553 aagga------caattgatttgcagaaaatgttttgctctttcttcctcaa 363509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 495
Target Start/End: Original strand, 35643 - 35881
Alignment:
Q  257 aaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaa 355  Q
    |||||||| | ||||||| ||||||   ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||    
T  35643 aaaatttcctccaataataagtggttcagttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaa 35742  T
Q  356 atttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctcca 455  Q
    ||||||| |||||||| | || || ||||||||||||||||| || |||||  || ||  |||| |  |||||||||| ||| || ||||| ||||||||    
T  35743 atttcttgaagcaaaactattgaaattgaatctgaaatgatgtggagtgggaatatggaaaaaa-cggttatgaaagttaagtttcatcttcaagctcca 35841  T
Q  456 tgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
     ||||||||||| ||||||||||||||||||||| |||||    
T  35842 agtttaatggtgttgtgagagtgcttgaatgttggtgtcc 35881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 40099212 - 40099115
Alignment:
Q  72 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 169  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||| ||||||  ||||||| |||||| ||||||||||||||  ||||| |||||||    
T  40099212 gttaacctctcacatgggttgtcatgtcagatgccacataagcagggactaaattggtcgatagtgacaaaaatttccaaggacaaaattgattgatt 40099115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 2359394 - 2359516
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||||| ||||||||||||||||| ||| ||||| | ||||||| ||||||||||||| ||| |||||  ||  |||||||    
T  2359394 tttcttccccaaatctataaaattgaaaccctaattttacaatttgtcatctagagtccaaaa-tcccaaaatttctatcattaattgatgacaacgttc 2359492  T
Q  289 ttccccaattcaaaaagcttcaaa 312  Q
    ||||||||||| |||| |||||||    
T  2359493 ttccccaattctaaaaacttcaaa 2359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 489
Target Start/End: Complemental strand, 42880610 - 42880309
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||| | || || |||| ||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||   |    
T  42880610 ctctttcttccccaattgtataacattgaaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtccag 42880511  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    ||||||||||||| ||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || |||||    
T  42880510 ttcttccccaatttaaaaaacttcaaaccctaattttttcgtattaaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 42880411  T
Q  386 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 485  Q
    || ||||| ||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||| ||||| | |||||||||||   || ||||||||||||    
T  42880410 tcagaaatcatgggggttgggaatatgggaaaaaacagttatgaaagtcgagcttcatctttgagctctaagtttaatggtg--ttgcgagtgcttgaat 42880313  T
Q  486 gttg 489  Q
    ||||    
T  42880312 gttg 42880309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 4415271 - 4415423
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 117  Q
    |||||||| |||||| ||   |||| |||| | ||||||||||  || ||| ||||||||||||||||||||||||||| |||||||||||| |||||      
T  4415271 tcaatcaaattagtccctacgtccatttggggcgttaacggtgatgatgtggccgttaacctctcacatgggttgccatgtcagatgccacataagcaag 4415370  T
Q  118 gactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgattt 170  Q
    ||||||  || || | |||||| |||||||| |||||  ||||| ||||||||    
T  4415371 gactaaattgatcaatagtgacaaaaatttcgaaggagaaaattgattgattt 4415423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 14001454 - 14001336
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 148  Q
    ||||||||||||  |||||| |||||||||||||||||||||| |||| ||||||| |||| |||||| ||||||  |||| || ||||||  ||||||     
T  14001454 gtgttaacggtgatgacgtggccgttaacctctcacatgggtttccatgtcagatgtcacataagcagggactaaattggttgatagtgac--aaatttt 14001357  T
Q  149 caaggatcaaattaattgatt 169  Q
    ||||||  ||||| |||||||    
T  14001356 caaggacgaaattgattgatt 14001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 446
Target Start/End: Original strand, 40150664 - 40150825
Alignment:
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaag-caaaattgttcaatttga 384  Q
    ||||||||| |||| |||| |||||||||||| |        ||||||||| |||| |||||||  ||||||||||||||  ||||||||||||  ||||    
T  40150664 ttcttcccctattctaaaaacttcaaaccctattttgttttcattgaatccaaaatccaaaatcttcaaaatttcttcaaatcaaaattgttcagattga 40150763  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctt 446  Q
    |||| |||||||| | |||||  ||| |||||||| ||||| | ||||||||| || |||||    
T  40150764 atctaaaatgatgggtggtggccgtatgggcaaaaacaattctcaaagtcaagtttcatctt 40150825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 34400628 - 34400762
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  34400628 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 34400727  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34400728 gttcttccccaattcaaaaaacttaaaaccctaat 34400762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 40152246 - 40152135
Alignment:
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    |||||||||||||| |||| ||| ||||||||||        |||||||||||||| |||||||   ||||||||||||| ||||||||||||  |||||    
T  40152246 ttcttccccaattctaaaaacttaaaaccctaatttgatttgattgaatccgaaatccaaaatcctgaaaatttcttcaaccaaaattgttcagattgaa 40152147  T
Q  386 tctgaaatgatg 397  Q
    ||  ||||||||    
T  40152146 tccaaaatgatg 40152135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 352 - 470
Target Start/End: Complemental strand, 42003108 - 42002990
Alignment:
Q  352 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 451  Q
    ||||||||||| |||||||| | || || |  |||||||||||||  ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| ||||    
T  42003108 caaaatttcttgaagcaaaactattgaaataaaatctgaaatgatagggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagc 42003009  T
Q  452 tccatgtttaatggtgatg 470  Q
    |||| ||||||||||||||    
T  42003008 tccaagtttaatggtgatg 42002990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 42517877 - 42518011
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| || |||||| ||  ||||  ||  ||     
T  42517877 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaattttcttccatgaattgatgtcaat 42517976  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  42517977 gttcttccccaattcaaaaaacttaaaaccctaat 42518011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 15373667 - 15373554
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggta-acgttcttccccaattcaaaaag 305  Q
    ||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||  | ||||||||||||||||||||     
T  15373667 aaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccaagttcttccccaattcaaaaaa 15373568  T
Q  306 cttcaaaccctaat 319  Q
    ||| ||||||||||    
T  15373567 cttaaaaccctaat 15373554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 17697903 - 17697776
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||| ||| |||| |  |||    |    
T  17697903 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttc-ttccataaatgatgg----g 17697809  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaa 318  Q
    ||||||||||||||||||| ||| |||||||||    
T  17697808 ttcttccccaattcaaaaaacttaaaaccctaa 17697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 10715205 - 10715275
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||| |||||||||| |||| |||||||| |||||||||||||| ||| ||| |||||| |||| |||||    
T  10715205 gtcaaacaatttagtccctctgtccaattgaagtgttaacggtgctgacatgatcgttaatctcttacatg 10715275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 11312948 - 11313018
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    |||||||||||||||| |||  ||||||||||||||||||| ||| ||| |   |||||||||||||||||    
T  11312948 gtcaatcaatttagtccctccgtccaattggagtgttaacgatgctgacatagtcgttaacctctcacatg 11313018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 19907036 - 19907170
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  19907036 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 19907135  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  19907136 gttcttcaccaattcaaaaaacttaaaaccctaat 19907170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 17948889 - 17948784
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 148  Q
    |||||||| | || |||||| |||||||||||||||||||  || ||| ||||| |||||| |||||| ||||||| ||| |||  || ||||| ||||     
T  17948889 gtgttaacagagctgacgtggccgttaacctctcacatggactgtcatgtcagacgccacacaagcagggactaatatggccgattgtaaccaacatttt 17948790  T
Q  149 caagga 154  Q
    ||||||    
T  17948789 caagga 17948784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 26581329 - 26581430
Alignment:
Q  218 cctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaacccta 317  Q
    |||||||||| ||| ||| | ||| | | |||||||||||||||||||| || |||||  ||  |||| | |||||||||||||||| ||||||| ||||    
T  26581329 cctaattttataatttgtcacctagagttcaaaattcccaaaatttcttccattaattgatgacaacgctgttccccaattcaaaaaacttcaaaaccta 26581428  T
Q  318 at 319  Q
    ||    
T  26581429 at 26581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 59990 - 60026
Alignment:
Q  73 ttaacctctcacatgggttgccatatcagatgccaca 109  Q
    |||||||||||||||||||||||| ||||||||||||    
T  59990 ttaacctctcacatgggttgccatgtcagatgccaca 60026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 41708209 - 41708097
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | | ||||| ||||||   |||||||| ||||||||||| |    
T  41708209 aaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctcccataataagtggtccagttcttcctcaattcaaaaaac 41708110  T
Q  307 ttcaaaccctaat 319  Q
    || ||||||||||    
T  41708109 ttaaaaccctaat 41708097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 161854 - 161813
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaatttta 227  Q
    ||||||||||| |||||||| ||| |||||||||||||||||    
T  161854 ctctttcttccccaaatataaaaatttggaaccctaatttta 161813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 16377082 - 16377163
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 266  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||||| | |||||| | | |||||||||    
T  16377082 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctacagttcaaaatcctctaaatttctt 16377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 14387765 - 14387837
Alignment:
Q  247 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||| ||||||||||||| ||||||||  ||  ||  ||||||||||||||||||| |||  |||||||||    
T  14387765 caaaatccccaaaatttcttccaataattgatgtcaattttcttccccaattcaaaaaacttagaaccctaat 14387837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 32607310 - 32607374
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagca 115  Q
    ||||||||||  |||||| | |||||| ||||| |||||||||||| | |||||||||| |||||    
T  32607310 gttaacggtgatgacgtggctgttaacatctcagatgggttgccatgttagatgccacataagca 32607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 5784666 - 5784366
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5784666 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5784567  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5784566 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 5784467  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5784466 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5784367  T
Q  489 g 489  Q
    |    
T  5784366 g 5784366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 186 - 495
Target Start/End: Original strand, 42558248 - 42558546
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||          |  |||||| ||||| || |||||| ||   |||    
T  42558248 ctctttcttccccaaatctagaaaattggaaccctaattttacaatctgtcatcta----------tctccaaaaattcttccattaattaatgacgacg 42558337  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    ||||| |||||||| |||| ||||||||||||||        ||||||||| |||| |||||||  ||||||||||||||||| |||||||||  |||||    
T  42558338 ttctttcccaattctaaaaacttcaaaccctaat-tcttttgattgaatccaaaatccaaaatccgcaaaatttcttcaagcataattgttcagattgaa 42558436  T
Q  386 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 485  Q
    |||||||||||| | |||||| ||| |||||||| || |||| ||| |  ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  42558437 tctgaaatgatgggtggtgggcgtatgggcaaaatcagttatcaaatttgagcttcatcttcaagctccatgtttaatggtgatgtgagagtgcttgaat 42558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 189 - 419
Target Start/End: Complemental strand, 51123342 - 51123115
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||||||||| || |||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  51123342 tttcttcctcaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagaggtaacgttc 51123243  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||||| ||| | | ||||||||||||        ||||||||||||    |||||| |||||||| ||||||  |||| ||||  | ||||||||    
T  51123242 ttccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaatcaaaaaatccccaaaattccttcaaataaaactgttgtaattgaatct 51123145  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaa 419  Q
    ||||||||| |||||||||||| ||||||||    
T  51123144 gaaatgatg-ggggtgggtgtatgggcaaaa 51123115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 11152837 - 11153136
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  11152837 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 11152936  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||   ||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11152937 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaactaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11153036  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||| ||| ||||| |  ||||||||||||||||||||||||| ||||||| ||||    
T  11153037 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaaacttcatcttcatcctccatgtttaatggtgatgtgagaatgcttgagtgtt 11153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 25172818 - 25172701
Alignment:
Q  202 tatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaa 301  Q
    |||| |||||| |||||||||||||||||| | |||| ||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  25172818 tatataaaattagaaccctaattttacaatctttaatgtacgctccaaaatctccaaaatttcttccaataattagtggtaacgttcttccccaatttaa 25172719  T
Q  302 aaagcttcaaaccctaat 319  Q
    |||  |||||||||||||    
T  25172718 aaaaattcaaaccctaat 25172701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 495
Target Start/End: Complemental strand, 31803500 - 31803190
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || |||||||||||  |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  31803500 gctctttcttccccaattgtataaaattggaacgttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 31803401  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  31803400 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 31803301  T
Q  384 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 483  Q
    |||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| |||||||| ||||||| ||| |||||||||||||||    
T  31803300 aatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagctccaagtttaatagtgttgtgagagtgcttga 31803202  T
Q  484 atgttgatgtcc 495  Q
    |||||| |||||    
T  31803201 atgttggtgtcc 31803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 495
Target Start/End: Original strand, 46637056 - 46637365
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || |||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  46637056 gctctttcttccccaatt-tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 46637154  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  46637155 gttctaccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 46637254  T
Q  384 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 483  Q
    ||||| |||||||| ||||||||  || ||  |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  46637255 aatctaaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 46637353  T
Q  484 atgttgatgtcc 495  Q
    |||||| |||||    
T  46637354 atgttggtgtcc 46637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 470
Target Start/End: Original strand, 45379374 - 45379658
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || |||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45379374 gctctgtcttccccaattgtataaaattagaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcta 45379473  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||| ||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  45379474 gttcttccccaattcagaaaacttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 45379573  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| |||||||||||||| |||||| |||||||    
T  45379574 atctgaaatgaag-ggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatctttaagctccaagtttaacggtgatg 45379658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 470
Target Start/End: Complemental strand, 44159072 - 44158807
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||| |||||| |||  ||||| || |||||||| || |||||  || ||||||| | ||||||| |||||| | |||||||||||||||||||| |    
T  44159072 aaaattgaaaccctgattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcaagttcttccccaattcaaaaaac 44158973  T
Q  307 ttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtg 404  Q
    || ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||||||||| | ||||||    
T  44158972 ttgaaaccctaattttttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattgaatctgaaatgaaggggggtg 44158873  T
Q  405 ggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    ||  || ||| ||||  | ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  44158872 ggattatgggaaaaaatagttatgaaagtcgagcttcatcttcaagcttcaagtttaatggtgatg 44158807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 25173005 - 25172876
Alignment:
Q  41 caattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgacc 140  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||          ||||||| |||| |||||||||||||| ||  ||| |||||||    
T  25173005 caattggagtgttaacggtgctgacgtgaccgttaacctctcacatg----------tcagatgtcacataagcagagactaatttgaccgatagtgacc 25172916  T
Q  141 aaaatttccaaggatcaaattaattgatttgtagaaaatg 180  Q
    ||||||||||||||  || || ||||||||| ||||||||    
T  25172915 aaaatttccaaggacgaatttgattgatttgcagaaaatg 25172876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 470
Target Start/End: Complemental strand, 42136045 - 42135761
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||| |||||| ||| | || |||||||||| |||||||  ||||| || |||||||| || |||||  || ||||||  | ||||||| |||| |       
T  42136045 gctctatcttccccaattgtataaaattggaatcctaattacacaatctgcaatctacattctaaaatcacctaaattttctccaataataagtgctcca 42135946  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||| ||||| ||||        |||||||| |||| |||||||   ||||||||||| |||||||| | || || ||||    
T  42135945 gttcttccccaattcaaaaaacttgaaacc-taattttttcgtattgaatctgaaagtcaaaattcacaaaatttcttgaagcaaaactattgaaattga 42135847  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  42135846 atctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 42135761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 43870274 - 43870156
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcca 150  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| ||||||| || | |||||| ||||||  |||| || |||||| ||||||||||    
T  43870274 gttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgtcatataagcagggactaaattggttgatagtgacaaaaatttcca 43870175  T
Q  151 aggatcaaattaattgatt 169  Q
    ||||  ||||| |||||||    
T  43870174 aggacgaaattgattgatt 43870156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 495
Target Start/End: Original strand, 18183063 - 18183205
Alignment:
Q  352 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 451  Q
    ||||||||||| |||||||| | || || ||| ||||||||||||| ||||||||   | ||| |||| || ||||||||||| || || ||||| ||||    
T  18183063 caaaatttcttgaagcaaaactattgaaattggatctgaaatgatg-ggggtgggaacatgggaaaaaacagttatgaaagtcgagtttcatcttcaagc 18183161  T
Q  452 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    |||| |||||||||||||||||||  |||||||||||| |||||    
T  18183162 tccaagtttaatggtgatgtgagaaagcttgaatgttggtgtcc 18183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 33679549 - 33679680
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||||||| | |||||||||||||||||||||  ||||| || ||| ||||||| |||||  || ||||||| | ||||||| | | ||       
T  33679549 gctctttcttcctcaattgtacaaaattggaaccctaattacacaatctgcaatatacactctaaaatcacctaaatttcctccaataataactagtcca 33679648  T
Q  285 gttcttccccaattcaaaaagcttcaaaccct 316  Q
    |||||||||||||||||||| |||||||||||    
T  33679649 gttcttccccaattcaaaaaacttcaaaccct 33679680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 42558055 - 42558216
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtg-accgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    ||||||||||||||| ||   || | |||| ||||||||||||| || ||| ||||||||||||||||| || ||| ||| ||| |||||||| |||||     
T  42558055 tcaatcaatttagtccctacgtcaagttggggtgttaacggtgctgatgtggaccgttaacctctcacaaggcttgtcatgtcaaatgccacacaagcat 42558154  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaat 179  Q
    | |||||| ||| ||| ||||| ||||||| |||||||  ||||| |||||||||||||||||    
T  42558155 aaactaatttggccgaaagtga-caaaattgccaaggacgaaattgattgatttgtagaaaat 42558216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 185 - 317
Target Start/End: Complemental strand, 6576906 - 6576774
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||||||||||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  6576906 gctctttcttccccaattgtataaaattggaaccctaattaaacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 6576807  T
Q  285 gttcttccccaattcaaaaagcttcaaacccta 317  Q
    ||| || ||||||||||||| ||||||||||||    
T  6576806 gttttttcccaattcaaaaaacttcaaacccta 6576774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 470
Target Start/End: Original strand, 35478378 - 35478660
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||||||| | |  ||||||| ||||||||||  ||||| |   |||||||||| |||||  || ||||||| | ||||||| ||||||       
T  35478378 gctctttcttcctcaattgtttaaaattgaaaccctaattacacaatct---atctacactctaaaatcacctaaatttcctccaataataagtggttta 35478474  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    ||| |||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  |    
T  35478475 gtttttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaacttcttgaagcaaaactattgaaataaa 35478574  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
    |||  |||||||| ||||||||  || ||| ||||    ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  35478575 atccaaaatgatggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttgaagcttcaagtttaatggtgatg 35478660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 50554500 - 50554634
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| ||| |||||| ||| ||||||||| ||  ||||  ||  ||     
T  50554500 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagacttcaaaatcccccaaatttcttacatgaattgatgtcaat 50554599  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  50554600 gttcttccccaattcaaaaaacttaaaaccctaat 50554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 31237139 - 31237273
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||  ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||  ||  ||     
T  31237139 gctctttcttccccaaatatataattttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccattaattgatgtcaat 31237238  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  31237239 gttcttccccaattcaaaaaacttaaaaccctaat 31237273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 18058121 - 18058254
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||||| || |||||||||||| |||||||||||| ||| ||||| | | |||||| | ||||| |||||  | |||||  ||  |||     
T  18058121 ctctttcttccccaaatttataaaattggaaccttaattttacaatttgtcatctagagttcaaaatcctcaaaacttcttcaattaattgatgacaaca 18058220  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||| |||| ||||||| ||||||    
T  18058221 ttcttccccaattctaaaaacttcaaaacctaat 18058254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 34041822 - 34041763
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaa 76  Q
    |||||| |||||||||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  34041822 gtcaataaatttagtccatctgtccaattggagtgttaacggtgctgacgtgaccgttaa 34041763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 15106116 - 15105986
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||| |||||| |||||| ||| |||  || | ||||| | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  15106116 tttcttccccaaatatataaatttggaatcctaatgttataattcgtcacctacagttcaaaatccccaaaatttcttacatgaattgatgccaaagttc 15106017  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||| ||| ||||||||||    
T  15106016 ttccccaattcaaaaaacttaaaaccctaat 15105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 18180818 - 18180900
Alignment:
Q  236 aatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 318  Q
    |||||||||||||||||  |||||||||| | || |||| ||||||    ||||||||||||||||||| |||||||||||||    
T  18180818 aatctacactccaaaatcaccaaaatttcctccagtaataagtggtccgattcttccccaattcaaaaaacttcaaaccctaa 18180900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 6817200 - 6817333
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| || |||||||||| ||| ||| ||| | ||| | | ||||||||| |||||||||| ||  ||||  ||  || |    
T  6817200 ctctttcttccccaaatatataaatttagaaccctaatgttataatttgttacctagagttcaaaattcctaaaatttcttccatgaattgatgtcaatg 6817299  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||  ||| ||||||||||    
T  6817300 ttcttccccaattcaaaagacttaaaaccctaat 6817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 51546285 - 51546213
Alignment:
Q  51 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaa 123  Q
    ||||||||||  |||||| | |||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  51546285 gttaacggtgatgacgtggctgttaacatctcagatgggttgccatgtcagatgccacataagcagggactaa 51546213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 470
Target Start/End: Original strand, 33679696 - 33679814
Alignment:
Q  352 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 451  Q
    ||||||||||| |||||||| | || || |  |||| ||||||||| ||||||||  ||  || |||| |  ||||||||||| ||||| ||||| ||||    
T  33679696 caaaatttcttgaagcaaaactattgaaataaaatccgaaatgatggggggtgggaatataggaaaaaactgttatgaaagtcgagcttcatcttcaagc 33679795  T
Q  452 tccatgtttaatggtgatg 470  Q
    |||| ||||||||||||||    
T  33679796 tccaagtttaatggtgatg 33679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 35009608 - 35009511
Alignment:
Q  79 tctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaa 177  Q
    ||||||| || || |||| | |||||||||| |||||||||||||| ||||||| ||||| ||||||||| || ||  ||||| ||||||||| |||||    
T  35009608 tctcacaaggctttccatgttagatgccacacaagcagagactaatttggtcgaaagtga-caaaatttcgaatgactaaattgattgatttgcagaaa 35009511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 27952279 - 27952167
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||| ||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||| |    
T  27952279 aaaattgtaaccctaattacacaatttttaatctacattctaatatcacttaaatttcctccaataataagtggtccagttcttccccaattcaaaaaac 27952180  T
Q  307 ttcaaaccctaat 319  Q
    || ||||||||||    
T  27952179 ttaaaaccctaat 27952167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 3369587 - 3369689
Alignment:
Q  76 acctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtaga 175  Q
    |||||||||| || ||| ||| ||||||| |||| |||||||||||||| |||  || | ||| |||||||||||||||  ||||| ||||||||  |||    
T  3369587 acctctcacaaggcttgtcatgtcagatgtcacacaagcagagactaatttggctgaaaatga-caaaatttccaaggactaaattgattgatttacaga 3369685  T
Q  176 aaat 179  Q
    ||||    
T  3369686 aaat 3369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 51123517 - 51123442
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaat 124  Q
    |||||||||| || |||||| |||||||||||||||||||  |||||| ||| |  ||||| |||||| |||||||    
T  51123517 gtgttaacggagctgacgtggccgttaacctctcacatggactgccatgtcaaacaccacacaagcagggactaat 51123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 2870845 - 2870712
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||| | ||||||||  || ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  2870845 gctctttctttcccaaatatatcaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 2870746  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  2870745 gttcttccccaattcaaaaa-cttaaaaccctaat 2870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 44159288 - 44159218
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||| ||| | |||  | || |||||||| || |||||||||||||||||||||||||    
T  44159288 gtcaatcaagttagtcattctgttcaaacgaagcgttaacggggctgacgtgaccgttaacctctcacatg 44159218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 39922806 - 39922506
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39922806 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39922707  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39922706 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39922607  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39922606 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39922507  T
Q  489 g 489  Q
    |    
T  39922506 g 39922506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 39084951 - 39084651
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39084951 tttcttccccaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39084852  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39084851 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39084752  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39084751 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39084652  T
Q  489 g 489  Q
    |    
T  39084651 g 39084651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 39190618 - 39190318
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39190618 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39190519  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  39190518 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 39190419  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39190418 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39190319  T
Q  489 g 489  Q
    |    
T  39190318 g 39190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 42879576 - 42879876
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42879576 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42879675  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42879676 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42879775  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  42879776 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgattgaatgtt 42879875  T
Q  489 g 489  Q
    |    
T  42879876 g 42879876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 43778681 - 43778979
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||  |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  43778681 tttcttcgccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 43778780  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  43778781 ttccccaa-tcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 43778878  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  43778879 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 43778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 5485851 - 5485551
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5485851 tttcttccccaaatatataaaattggaaccctaattttaccatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5485752  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5485751 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaaatgttgaaattgaatct 5485652  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | || ||   || ||||||||  |  ||| ||||||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||    
T  5485651 aaaatgatgggaggcggtcatatgggcaaaaagagctatcaaagtcaagcttcgtcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5485552  T
Q  489 g 489  Q
    |    
T  5485551 g 5485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 189 - 488
Target Start/End: Original strand, 44993100 - 44993399
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  44993100 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 44993199  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  44993200 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 44993299  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   || ||||||||  |  ||| ||||||||| || ||||| |  ||||||||||||||||||||||| ||||||||||||||    
T  44993300 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgaaagtgcttgaatgtt 44993399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 13438146 - 13438275
Alignment:
Q  190 ttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 289  Q
    ||||||| |||||||| ||||| | ||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  13438146 ttcttccccaaatatataaaatagaaaccctaattttacaatctttaatgtacactccaaaattcccaaaatttcttccaataattagtggtaactttct 13438245  T
Q  290 tccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||| ||||||||||||||    
T  13438246 tccccaattcaaaaaacttcaaaccctaat 13438275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 32653430 - 32653130
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    ||||||||  ||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  32653430 tttcttcccaaaatatataaaattgaaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 32653331  T
Q  289 ttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 387  Q
    |||||||| |||||||  | |||||||||| |        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  32653330 ttccccaaatcaaaaaattacaaaccctaatttttttttaattgaatatgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 32653231  T
Q  388 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 487  Q
    | |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  || ||||||||||||||||||||||||||| ||||||    
T  32653230 taaaatgaag-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatccttcatgtttaatggtgatgtgagagtgctcgaatgt 32653132  T
Q  488 tg 489  Q
    ||    
T  32653131 tg 32653130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 200 - 385
Target Start/End: Complemental strand, 25994897 - 25994708
Alignment:
Q  200 aatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattc 299  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||||    
T  25994897 aatatataaaattggaactctaaatttacaatctgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacattcttcctcaattc 25994798  T
Q  300 aaaaagcttcaaaccctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    ||||| || |||||||| |    |        |||||||||||||  || |||| ||||||||||||||||||||| ||||||| |||||    
T  25994797 aaaaaactccaaaccctgatttttttttttttattgaatccgaaaaccagaatccccaaaatttcttcaagcaaaactgttcaaattgaa 25994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 230740 - 230869
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||  |||||||| |||||||| | |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  230740 tttcttctccaaatatataaaattggcatcctaattttacaatctgtaatctacactccaaagtccccaaaatttcttccaataattagtggtaacgttc 230839  T
Q  289 ttccccaattcaaaaagcttcaaaccctaat 319  Q
    || || ||||||||||  |||||||||||||    
T  230840 tt-cctaattcaaaaaatttcaaaccctaat 230869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 495
Target Start/End: Complemental strand, 4520270 - 4519959
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||  ||| |||| ||||||||||||||||||  | ||| || ||||||||||| |||||  |||||||||| |   ||||| ||||||       
T  4520270 gctctttcttcgccaattatataaaattggaaccctaattacaaaatttgcaatctacactctaaaatcaccaaaatttcctctgataataagtggttca 4520171  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 382  Q
    ||||||| |||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || ||  |    
T  4520170 gttcttctccaattcaaaaaacttgaaaccctaatttttttttgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaaat 4520071  T
Q  383 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 482  Q
    |||| |||||||||| |||||||   || ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||||||||||||| | ||||||||    
T  4520070 gaatatgaaatgatg-ggggtggaaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtcaaagtgcttg 4519972  T
Q  483 aatgttgatgtcc 495  Q
    ||||||| |||||    
T  4519971 aatgttggtgtcc 4519959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 230537 - 230728
Alignment:
Q  21 atcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagac 120  Q
    |||||||||||| |||| | ||||| | ||||||||||||| |||||| |||||||||||||||||||||  |||| |||||||||||| |||||| ||     
T  230537 atcaatttagtccctctgttcaatttgggtgttaacggtgctgacgtggccgttaacctctcacatgggtctccatgtcagatgccacacaagcagggat 230636  T
Q  121 taatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatacaaaatt 212  Q
    |||| |||  || |||||||| ||||||||||||  || ||   |||||||  |||||||||||||| |||||||| ||| |||| ||||||    
T  230637 taatttggctgatagtgaccataatttccaaggactaatttggctgatttgctgaaaatgctttgctttttcttccccaattatataaaatt 230728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 39294840 - 39294645
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||  ||| ||| |  |||||| ||||| |||||| |||||||||||||||| ||||    || ||||||| |||||||||||    
T  39294840 gtcaatcaatttagtccctccgtccgatttggatgttaatggtgctgacgtggccgttaacctctcacaggggtctttatgtcagatgtcacagaagcag 39294741  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatacaaaatt 212  Q
     ||||||| |||  || | |||||||||||||||| |   ||||| ||||||||| |||||||||||| ||||||||||| |||||||| ||||||    
T  39294740 ggactaatttggatgataatgaccaaaatttccaaaggctaaattgattgatttgcagaaaatgcttttctctttcttccccaaatatataaaatt 39294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 39294625 - 39294553
Alignment:
Q  246 ccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 318  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39294625 ccaaaatccccaaaatttcttccaataattagtggtaacgttcttccccaattcaaaaaacttcaaaccctaa 39294553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 207 - 470
Target Start/End: Original strand, 44556920 - 44557183
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||  ||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||| |    
T  44556920 aaaattggaattctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaaaac 44557019  T
Q  307 ttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 406  Q
    |||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  ||||  |||||||||||||||||    
T  44557020 ttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaaattcttgaagcaaaactattgaaataaaatccaaaatgatgaggggtggg 44557119  T
Q  407 tgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 470  Q
      || ||| |||| |  ||||||||||| ||||| |||||  ||||||| ||||||||||||||    
T  44557120 aatatgggaaaaaactgttatgaaagtcgagcttcatcttctagctccaagtttaatggtgatg 44557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 469
Target Start/End: Complemental strand, 27626530 - 27626246
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||||||||||||||||||  ||||| |  ||||||||||| |||||     ||||||| | ||||||| ||||||       
T  27626530 gctctttcttccccaattgtataaaattggaaccctaattacacaatctacaatctacactctaaaatcatttaaatttcctccaataataagtggtcca 27626431  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
     ||||||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||||||||| |||||||| | || || |  |    
T  27626430 attcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaatttcttgaagcaaaactattgaaataaa 27626331  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgat 469  Q
    |||  |||||||| ||||||||  || ||  |||| |  ||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  27626330 atccaaaatgatggggggtgggaatatggcaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgat 27626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 50133096 - 50132945
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 117  Q
    |||||||| |||||| ||   |||| |||| | ||||||||||  ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||     
T  50133096 tcaatcaaattagtcccttcgtccatttggggcgttaacggtgatgacgtgaccgttaacctctcacatgggttgctaagtcagatgccacataagcagg 50132997  T
Q  118 gactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 169  Q
    ||||||  |||| || |||||| |||| || ||||||  ||||| |||||||    
T  50132996 gactaaattggttgatagtgacaaaaaatttcaaggacgaaattgattgatt 50132945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 475
Target Start/End: Original strand, 51041027 - 51041314
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||| | || ||||||| ||||||||||  ||||| || |||||||| ||||||||  |||  ||||| | |  |||| ||||||   |    
T  51041027 ctctttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacattccaaaatcaccatgatttcctccggtaataagtggttcgg 51041126  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 385  Q
    ||||||||| ||||| ||| |||||||||||||         |||||||| |||| ||||||||  |||||    || |||||||| | || || |||||    
T  51041127 ttcttcccctattcataaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaaaaatttgaagcaaaactattgaaattgaa 51041226  T
Q  386 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 475  Q
    | ||||||||||  |||||||  || ||| |||| || ||||||||||| || || ||||| |||||||| |||||||||||||||||||    
T  51041227 tatgaaatgatg--gggtgggaatatgggaaaaaacagttatgaaagtcgagtttcatcttcaagctccaagtttaatggtgatgtgaga 51041314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 187 - 299
Target Start/End: Original strand, 28100865 - 28100977
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    |||||||||| ||||| || ||||||| ||| |||||| |||||| | ||||||| | |||||||||||||||||||||| || |||||  ||  |||||    
T  28100865 tctttcttccccaaatctataaaattgaaactctaattgtacaatttataatctagagtccaaaattcccaaaatttcttccattaattgatgacaacgt 28100964  T
Q  287 tcttccccaattc 299  Q
    |||||||||||||    
T  28100965 tcttccccaattc 28100977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 319
Target Start/End: Complemental strand, 13450107 - 13449984
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    |||||||||  ||||| || ||||||| ||||||||||||||||| | |||| ||||||||||||||         |||| ||||||||| |  |||| |    
T  13450107 tctttcttcaccaaatgtataaaattgaaaccctaattttacaatctttaatgtacactccaaaatt---------tcttccaataattatttttaacat 13450017  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||| ||||||||||||||    
T  13450016 tcttccccaattcaaaaaacttcaaaccctaat 13449984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 2691684 - 2691818
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  |||||||||||| || |||||  ||  ||     
T  2691684 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctccaaaatttcttccattaattgatgacaaa 2691783  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
     ||||||||||||||||||| ||| ||||||||||    
T  2691784 attcttccccaattcaaaaaacttaaaaccctaat 2691818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 20820290 - 20820423
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||| |||||||||| ||| ||||||||||||||||| ||| ||| | ||| | |  ||||| ||||||||||||| || |||||  ||  || |    
T  20820290 ctctttctttctcaaatatataaatttggaaccctaattttataatttgtcacctaaagtttaaaatccccaaaatttcttccactaattgatgacaaag 20820389  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||| |||||||||||| ||| ||| ||||||    
T  20820390 ttcttctccaattcaaaaaacttaaaaacctaat 20820423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 463
Target Start/End: Complemental strand, 35997462 - 35997284
Alignment:
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||| ||||| ||| |||||||||         |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  35997462 gttcttccccaatttaaaaaacttgaaaccctaaatttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 35997363  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaat 463  Q
    ||||||||||||| ||||||||  || ||| |||| |  ||| ||||||| ||||| ||||| ||||| || |||||||    
T  35997362 atctgaaatgatggggggtgggaatatgggaaaaaactgttaagaaagtcgagcttcatcttcaagctgcaagtttaat 35997284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 6999293 - 6999229
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 82  Q
    ||||||||||||||| |||  |||||||||||||||||||||||  |||||||| ||||||||||    
T  6999293 tcaatcaatttagtccctccgtccaattggagtgttaacggtgctaacgtgaccattaacctctc 6999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 47942525 - 47942413
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   |||||||||||||||||||| |    
T  47942525 aaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaaaac 47942426  T
Q  307 ttcaaaccctaat 319  Q
    || ||||||||||    
T  47942425 ttaaaaccctaat 47942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 488
Target Start/End: Complemental strand, 10544605 - 10544498
Alignment:
Q  381 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 480  Q
    |||||| |||||||||| | |||||| ||| |||||||| || || | |||||| | ||| ||||| |||||| ||||||||||||||||| ||| || |    
T  10544605 ttgaatatgaaatgatgggtggtgggcgtatgggcaaaaacagttctcaaagtcgaacttcatcttcaagctctatgtttaatggtgatgtcagaatgtt 10544506  T
Q  481 tgaatgtt 488  Q
    ||||||||    
T  10544505 tgaatgtt 10544498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 44974092 - 44973945
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 117  Q
    |||||||| |||||| ||   |||| |||| | |||||||| |  |||||| |||||||||||  |||||||||| ||| |||||||||||| ||||||     
T  44974092 tcaatcaaattagtccctacgtccatttggggcgttaacggagatgacgtggccgttaacctc--acatgggttgtcatgtcagatgccacataagcagg 44973995  T
Q  118 gactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattga 167  Q
    ||||||  |||  || |||||| |||||| |||||||| ||||| |||||    
T  44973994 gactaaattggctgatagtgacaaaaattaccaaggatgaaattgattga 44973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 54387670 - 54387537
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    |||||||| ||  ||||||| ||| ||||||||||||| ||||||| ||| | ||| | | |||||| | ||||||||||| ||  ||||  ||  || |    
T  54387670 ctctttctgccctaaatatataaatttggaaccctaatgttacaatttgtcacctagagttcaaaatcctcaaaatttcttccatgaattgatgccaaag 54387571  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  54387570 ttcttccccaattcaaaaaacttaaaaccctaat 54387537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 44793246 - 44793358
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||| |    
T  44793246 aaaattggaaccctaattacacaatctataatctacattctaatatcacataaatttcctccaataataagtggtccagttcttccccaattcaaaaaac 44793345  T
Q  307 ttcaaaccctaat 319  Q
    || ||||||||||    
T  44793346 ttaaaaccctaat 44793358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 26397862 - 26397756
Alignment:
Q  72 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttg 171  Q
    |||||||||||||| || ||| ||| ||||||| |||| |||||  || |||| ||| ||| |||||| ||||||||||| || |||||| |||||||||    
T  26397862 gttaacctctcacaaggcttgtcatgtcagatgtcacacaagcaaggattaatttggccgaaagtgac-aaaatttccaatgaccaaattgattgatttg 26397764  T
Q  172 tagaaaat 179  Q
     |||||||    
T  26397763 cagaaaat 26397756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 28100717 - 28100823
Alignment:
Q  72 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttg 171  Q
    ||||||||||||||  | ||| ||| ||||||| |||| |||||||||||||| ||| ||| ||||| |||||||  |||||||  |||| |||||||||    
T  28100717 gttaacctctcacaaagtttgtcatgtcagatgacacacaagcagagactaatttggccgaaagtga-caaaattgacaaggatggaattgattgatttg 28100815  T
Q  172 tagaaaat 179  Q
     |||||||    
T  28100816 cagaaaat 28100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 11254378 - 11254512
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||| ||||| || |||||  ||  ||     
T  11254378 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaaattcttccattaattgatgtcaat 11254477  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||  ||||||||||    
T  11254478 gttcttccccaattcaaaaaactcaaaaccctaat 11254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 43823563 - 43823494
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||| ||| | |||| || | ||||||||||| |||||||||||||||||||||||||    
T  43823563 gtcaatcaagttagtcattctgttcaatcgg-gcgttaacggtgctgacgtgaccgttaacctctcacatg 43823494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 10544778 - 10544693
Alignment:
Q  191 tcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatta 276  Q
    |||||| ||||| || |||||||||||||||||||| ||||   |  |||||| |||||||| ||||||||||||| || ||||||    
T  10544778 tcttccccaaatctataaaattggaaccctaatttttcaatccctcgtctacagtccaaaatccccaaaatttcttccattaatta 10544693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 26397715 - 26397635
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 266  Q
    |||||||||||||||||| || |||||| ||||||||| |||| ||| ||| ||||| | | |||||| |||||||||||||    
T  26397715 gctctttcttcctcaaatctataaaattagaaccctaa-tttataatttgtcatctagagttcaaaatccccaaaatttctt 26397635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 27383936 - 27383815
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 148  Q
    ||||||||||||  ||||||  ||||||||| ||| |||| ||||||| |||||||||||| |||||  || |||  |||  || |||||| ||||||||    
T  27383936 gtgttaacggtgatgacgtggtcgttaacctatcagatggattgccatgtcagatgccacataagcaatgaataaattggctgatagtgacaaaaatttc 27383837  T
Q  149 caaggatcaaattaattgattt 170  Q
    ||| ||  ||||| ||||||||    
T  27383836 caaagacgaaattgattgattt 27383815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 49524527 - 49524394
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||| |||| ||| ||||||||||||| ||| ||| ||| | ||  | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  49524527 ctctttcttccccaagtatataaatttggaaccctaatgttataatttgtcacctggagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 49524428  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  49524427 ttcttccccaattcaaaaaacttaaaaccctaat 49524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 27385980 - 27385940
Alignment:
Q  455 atgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  27385980 atgtttaatggtgatgtgagagtacttgaatgttggtgtcc 27385940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 9590451 - 9590549
Alignment:
Q  70 ccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 169  Q
    |||||||| ||||||||| |||| ||| |||||||||||| || ||| ||||||| ||| |||  || |||||||||| ||||||  ||||| |||||||    
T  9590451 ccgttaacttctcacatgagttgtcatgtcagatgccacataa-cagggactaatttggccgatggtaaccaaaattttcaaggacgaaattgattgatt 9590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 28101018 - 28101179
Alignment:
Q  334 tccgaaattcaaaa-tcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaag 432  Q
    |||||||| ||||| || |||||||||||||||||     ||||||  ||||||||||||||||| | |||||   ||  |||||||  | |||| ||||    
T  28101018 tccgaaatccaaaaatctccaaaatttcttcaagctttggtgttcaggttgaatctgaaatgatgggtggtggca-tataggcaaaaatagttatcaaag 28101116  T
Q  433 tcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
     | | ||| ||||| |||||| |||| ||||||||||||||| |||||||||| ||| |||||    
T  28101117 acgatcttcatcttcaagctctatgtataatggtgatgtgagggtgcttgaatattggtgtcc 28101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 5486017 - 5485976
Alignment:
Q  46 ggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    |||| |||||||| || |||||||||||||||||||||||||    
T  5486017 ggagcgttaacggggctgacgtgaccgttaacctctcacatg 5485976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 32653620 - 32653555
Alignment:
Q  22 tcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||| ||| |||  ||||| ||||| ||||||||||| ||||||  |||||||||||||||||    
T  32653620 tcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatg 32653555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 13438012 - 13438056
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgc 61  Q
    ||||||||||||||||  ||| || ||||||||||||||||||||    
T  13438012 gtcaatcaatttagtccatctgtcaaattggagtgttaacggtgc 13438056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 15450405 - 15450341
Alignment:
Q  22 tcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacat 86  Q
    ||||||| ||| |||  ||||| ||||| ||||||||||| ||||||  ||||||||||||||||    
T  15450405 tcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacat 15450341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 8e-56; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 24498061 - 24497749
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 116  Q
    |||||||||||||||| |||| ||||||| ||||||||||  ||| |   |||||||||| ||| |||||||||  |||| | |||||||||| ||||||    
T  24498061 gtcaatcaatttagtccctctgtccaatttgagtgttaacattgctg---tgaccgttaatctcacacatgggtctccatgttagatgccacataagcag 24497965  T
Q  117 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaa---------------- 200  Q
    |||||||| ||| ||| ||||| |||||||| |||||| |||||| ||||||||| | |||||| ||||||||||||||| |||                    
T  24497964 agactaatttggccgatagtgatcaaaatttacaaggaccaaattgattgatttgcataaaatgttttgctctttcttccccaatggctatttcttccct 24497865  T
Q  201 --atatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaatt 298  Q
      ||||| ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | || ||||||||||||||||||    
T  24497864 aaatatataaaattgaaactctaattttacaataagtaatctacactccaaaattcccaaaatttcttccaataatcaatgataacgttcttccccaatt 24497765  T
Q  299 caaaaagcttcaaacc 314  Q
    |||||| |||||||||    
T  24497764 caaaaaccttcaaacc 24497749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 1344612 - 1344478
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| |||||||| ||||||||    
T  1344612 gctctttcttccctaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttcttccaataattggtggtaac 1344513  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||||||||||||||    
T  1344512 gttcttccccaattcaaaaaacttcaaaccctaat 1344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 42619581 - 42619875
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| ||||| || ||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42619581 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42619680  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42619681 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42619780  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| |||||||   || |||    |||   ||  |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  42619781 aaaatgatggggggtggtcatatggg---gagc---taccaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 42619874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 185 - 495
Target Start/End: Original strand, 18726853 - 18727164
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||||||||||||||||||  ||||| |||||||||||||| | |||    |||||||  | ||||||| ||||||       
T  18726853 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgtaatctacactctataatcatgaaaattttctccaataataagtggttca 18726952  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    ||||| |||||||||||||| ||||||||||||||         | ||||||  |||  |||||||  ||||||||||| |||||| | | || || |||    
T  18726953 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctcaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattg 18727052  T
Q  384 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 483  Q
    |||||||||||||| ||||||||  ||  || |||| |  |||||||||| |||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  18727053 aatctgaaatgatgtggggtgggaatataggaaaaaacggttatgaaagtaaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 18727152  T
Q  484 atgttgatgtcc 495  Q
    |||||| |||||    
T  18727153 atgttggtgtcc 18727164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 495
Target Start/End: Original strand, 35291387 - 35291644
Alignment:
Q  236 aatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatc 335  Q
    |||||||||||||||||  |||||||||| | || |||| ||||||   |||||||||||||||| ||| |||||||||||||         |||||||     
T  35291387 aatctacactccaaaatcaccaaaatttcctccagtaataagtggtccggttcttccccaattcacaaaacttcaaaccctaac-tttttgcattgaatt 35291485  T
Q  336 cgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtca 435  Q
     |||  ||||||||  ||||||||||| |||||||| | || || ||| ||||||||||||| ||||||||  || ||| |||| || ||||||||||||    
T  35291486 tgaatgtcaaaatcctcaaaatttcttgaagcaaaactattgaaattggatctgaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtca 35291584  T
Q  436 agctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    || || ||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  35291585 agtttcatcttcaagctccaagtttaatggtgatgtgatagtgcttgaatgttggtgtcc 35291644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 185 - 487
Target Start/End: Original strand, 38176923 - 38177225
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || || |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38176923 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38177022  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38177023 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38177122  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 484  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38177123 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38177222  T
Q  485 tgt 487  Q
    |||    
T  38177223 tgt 38177225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 185 - 487
Target Start/End: Original strand, 38204147 - 38204449
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || || |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38204147 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38204246  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 384  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38204247 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38204346  T
Q  385 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 484  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38204347 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38204446  T
Q  485 tgt 487  Q
    |||    
T  38204447 tgt 38204449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 207 - 495
Target Start/End: Complemental strand, 40330293 - 40330004
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||  | |||||||| | ||||||| ||||||   | ||||||||||||||| || |    
T  40330293 aaaattggaaccctaattacacaatatgcaatctacactccaaaatcacaaaaatttcctccaataataagtggtccagctcttccccaattcaacaaac 40330194  T
Q  307 ttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgg 405  Q
    || ||||||||||         |||||||  ||||  |||||||   |||||||||| |||||||| | || || |||| |||||||||||| |||||||    
T  40330193 ttgaaaccctaattttttccgtattgaatatgaaagccaaaatcttgaaaatttcttgaagcaaaactattgaaattgattctgaaatgatggggggtgg 40330094  T
Q  406 gtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
       || ||| ||||  | ||||||||||| ||||| ||||| ||  |||| ||||||||||||||||||||||||||||||||| |||||    
T  40330093 aaatatgggaaaaaatagttatgaaagtcgagcttcatcttcaatttccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 40330004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 495
Target Start/End: Complemental strand, 32089725 - 32089411
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||| | || ||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||  | ||||||| || |||       
T  32089725 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttactccaataataagaggttca 32089626  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  32089625 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 32089526  T
Q  384 aat-ctg--aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 480  Q
    ||| ||   |||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  32089525 aatacttcaaaatgatgtggggtgggaatatgggaaaaaacggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgct 32089426  T
Q  481 tgaatgttgatgtcc 495  Q
    ||||||||| |||||    
T  32089425 tgaatgttggtgtcc 32089411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 1343482 - 1343614
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    ||||||||||  ||||||| |||||||  |||||||||||| ||| | ||| ||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  1343482 tctttcttccctaaatatataaaattgacaccctaattttataatctttaaactacactccaaaatctccaaaatttcttccaatagttagtggtaacgt 1343581  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaat 319  Q
    | |||||||||| ||||| || |||||||||||    
T  1343582 ttttccccaatttaaaaaactccaaaccctaat 1343614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 189 - 419
Target Start/End: Complemental strand, 27350322 - 27350095
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||| | ||||| || ||||||||||||||||||||| ||| | ||||  |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  27350322 tttctttcccaaatgtataaaattggaaccctaattttataatctttaattcacacgccaaaattcccaaaaattctttcaataattagt-gtaacgttc 27350224  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 387  Q
     ||||||||| ||| | | |||||||||| |        ||||||||| ||||   |||||| ||||||||||||||| ||||| ||||  | ||||||     
T  27350223 atccccaattgaaataacctcaaaccctatt--ttttttattgaatccaaaataaaaaaatccccaaaatttcttcaaacaaaactgttgtaattgaata 27350126  T
Q  388 tgaaatgatgaggggtgggtgtaagggcaaaa 419  Q
     ||||||||| |||||||||||| ||||||||    
T  27350125 agaaatgatg-ggggtgggtgtatgggcaaaa 27350095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 342 - 495
Target Start/End: Original strand, 43317176 - 43317329
Alignment:
Q  342 tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttt 441  Q
    ||||||||  ||||||||||| |||||||| |  | || ||| ||||||||||||| ||||||||  || ||  |||| || ||||||||||| |||||     
T  43317176 tcaaaatcctcaaaatttcttgaagcaaaactagtgaaattggatctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttc 43317275  T
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| |||||    
T  43317276 atcttcaaactccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 43317329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 489
Target Start/End: Original strand, 32836192 - 32836470
Alignment:
Q  210 attggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttc 309  Q
    |||||||||||||||  ||||| || ||| ||||||  |||||  ||||||| || | |||  || | |||| | |||||||||||||||||||| ||||    
T  32836192 attggaaccctaattacacaatctgcaatttacactataaaatcaccaaaatatcctccaaatataaatggtcaagttcttccccaattcaaaaaacttc 32836291  T
Q  310 aaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgt 409  Q
    ||||||||||        |||||||   |||  |||||||  |||||  | || |||||||| | || || ||||||||||||||||| ||||||||  |    
T  32836292 aaaccctaattttttcgtattgaatttaaaagccaaaatcctcaaaaaattttgaagcaaaactattgaaattgaatctgaaatgatg-ggggtgggaat 32836390  T
Q  410 aagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 489  Q
    | | | |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  32836391 atgtgaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaatgttg 32836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 495
Target Start/End: Complemental strand, 18341745 - 18341593
Alignment:
Q  343 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttta 442  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||| | |||||  ||| |||||||| || || | ||| |  ||||| |    
T  18341745 caaaatccccaaaatttcttcaatcaaaattgttcagattgaatctgaaatgatgggtggtggtcgtatgggcaaaaacagttctcaaacttgagcttca 18341646  T
Q  443 tctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    || | || ||| |||||||| |||||||| ||| ||||||||||||| |||||    
T  18341645 tcctcaaactctatgtttaacggtgatgtaagaatgcttgaatgttggtgtcc 18341593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 419
Target Start/End: Complemental strand, 6116700 - 6116465
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| ||||| || ||||||| |||||||||||| |||| | ||||||||| || ||||| ||||||||||||| || ||||||     |||    
T  6116700 gctctttcttccccaaatctataaaattgaaaccctaatttttcaatctctaatctacagtcaaaaatccccaaaatttcttccattaatta---acaac 6116604  T
Q  285 --gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaat 380  Q
       ||||||||  |||| |||| |||||||||||||  |        |||||||  ||||| ||||||| ||||||||||||||  |||||||||||||     
T  6116603 catttcttccctgattctaaaaacttcaaaccctaatttttgttttgattgaatatgaaatccaaaatccccaaaatttcttcattcaaaattgttcaaa 6116504  T
Q  381 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaa 419  Q
    ||||||| ||||||||| | | ||||||||  |||||||    
T  6116503 ttgaatccgaaatgatgggtgatgggtgtataggcaaaa 6116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25509635 - 25509773
Alignment:
Q  44 ttggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaa 143  Q
    |||| ||||||||||||| |||||| |||||||||  ||| |||| |||||||  |||||| |||| ||| || ||||||| |||  || ||||||||||    
T  25509635 ttggggtgttaacggtgctgacgtggccgttaacccttcaaatggcttgccatgacagatgtcacataagtagggactaatttggctgatagtgaccaaa 25509734  T
Q  144 atttccaaggatcaaattaattgatttgtagaaaatgct 182  Q
    |||| ||||||  ||||| ||||||||| | ||||||||    
T  25509735 attttcaaggacaaaattgattgatttgcataaaatgct 25509773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 18623765 - 18623899
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| |||  || | ||| | | |||||| ||||||||||||| ||  ||||  ||  ||     
T  18623765 gctctttcttccccaaatatataaatttggaaccctaatgttataattcgtcacctagagttcaaaatccccaaaatttcttacatgaattgatgccaaa 18623864  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  18623865 gttcttccccaattcaaaaaacttaaaaccctaat 18623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 467
Target Start/End: Complemental strand, 35400486 - 35400226
Alignment:
Q  207 aaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagc 306  Q
    ||||||||||||||||||  |||||||| ||||||||||| | ||||   |||||||| | ||||||| ||||||    ||||  ||||||| ||||| |    
T  35400486 aaaattggaaccctaattacacaatatgcaatctacactctataattatgaaaatttcctccaataataagtggtccaattctgtcccaatttaaaaaac 35400387  T
Q  307 ttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 406  Q
    ||||||||  | |        | ||| || ||||  |||||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||    
T  35400386 ttcaaacctaatttttttcgtagtgagtctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatggggggtggg 35400287  T
Q  407 tgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtg 467  Q
      || ||| ||||    || ||||||||||| || ||||| || ||||| |||||||||||    
T  35400286 aatatgggaaaaaaaggttttgaaagtcaagtttcatcttcaaactccaagtttaatggtg 35400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 32134556 - 32134690
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||  |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  32134556 gctctttcttctacaaatatataaatttggaaccctaatgttataatttgtcacctatagttcaaaatcccccaaatttcttccatgaattgatgtcaat 32134655  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  32134656 gttcttccccaattcaaaaaacttaaaaccctaat 32134690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 33257309 - 33257262
Alignment:
Q  448 aagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 495  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  33257309 aagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 33257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 12738470 - 12738337
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    |||||||||||  ||| ||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12738470 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12738371  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12738370 ttcttccccaattcaaaaaacttaaaaccctaat 12738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 12801293 - 12801160
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    |||||||||||  ||| ||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12801293 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12801194  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12801193 ttcttccccaattcaaaaaacttaaaaccctaat 12801160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 27077256 - 27077123
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||  | || |||||||||||||||||| ||| ||| |   | | | ||||||  | |||||||||| || |||||  ||  ||||    
T  27077256 ctctttcttccccaaatccataacattggaaccctaattttataatttgtcactgagagttcaaaatctctaaaatttcttccattaattgatgacaacg 27077157  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||||||| ||||||    
T  27077156 ttcttccccaattcaaaaaacttcaaaacctaat 27077123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 33257559 - 33257426
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| ||| | || ||||||| |||||| |||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   |    
T  33257559 ctctttcttccccaattgtataaaattgtaaccctgattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcag 33257460  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||| |||||||||||||| ||||||||||||||    
T  33257459 ttctgccccaattcaaaaaacttcaaaccctaat 33257426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 38176758 - 38176799
Alignment:
Q  46 ggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  38176758 ggagtgttaacggggctgacgtgaccgttaacctctcacatg 38176799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 38203982 - 38204023
Alignment:
Q  46 ggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  38203982 ggagtgttaacggggctgacgtgaccgttaacctctcacatg 38204023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 27350497 - 27350437
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccaca 109  Q
    |||||||||  || |||||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  27350497 gtgttaacgaagctgacgtggccgttaacctctcacatggattgccatgtcagacgccaca 27350437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Complemental strand, 27077010 - 27076963
Alignment:
Q  442 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 489  Q
    ||||| |||||| || |||||||||||||||||||| |||||||||||    
T  27077010 atcttcaagctctatttttaatggtgatgtgagagtacttgaatgttg 27076963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 1344808 - 1344738
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    |||||||||||||||| |||  ||||| |||| ||||||| || |  ||||| ||||||||||||||||||    
T  1344808 gtcaatcaatttagtccctccgtccaaatggaatgttaaccgtacttacgtggccgttaacctctcacatg 1344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 35291145 - 35291215
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||  ||| | ||| ||||| |||||||| || |||||| ||||||||||||||||||    
T  35291145 gtcaatcaagttagtccttctgttcaaatggagcgttaacggagctgacgtggccgttaacctctcacatg 35291215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 41494167 - 41494285
Alignment:
Q  198 caaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 297  Q
    |||||||| ||| ||||||||| ||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || |||||||||||||    
T  41494167 caaatatataaatttggaacccgaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgacaaagttcttccccaat 41494266  T
Q  298 tcaaaaagcttcaaaccct 316  Q
    ||||||| ||| |||||||    
T  41494267 tcaaaaaacttaaaaccct 41494285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 43316877 - 43316947
Alignment:
Q  17 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||| ||||||  ||| | |||  |||| |||||||| || |||||||||||||||||||||||||    
T  43316877 gtcaatcaagttagtccttctgttcaaacggagcgttaacggagctgacgtgaccgttaacctctcacatg 43316947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 1343319 - 1343388
Alignment:
Q  18 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 87  Q
    ||||||||||||||| |||  ||||| ||||||||||||||||| ||  || | || |||||||||||||    
T  1343319 tcaatcaatttagtccctccgtccaaatggagtgttaacggtgctgatatggctgtcaacctctcacatg 1343388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 30464263 - 30464344
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 266  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| |||||||||    
T  30464263 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttctt 30464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 28035772 - 28035852
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 266  Q
    |||||||||||||| ||||| ||||||| |||| ||| ||| |||| | |||| |||| |  |||||| ||||||||||||    
T  28035772 ctctttcttcctcagatatataaaattgaaaccttaacttttcaatctctaatttacagtttaaaatttccaaaatttctt 28035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 5e-54; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 17950853 - 17951152
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  17950853 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 17950952  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  17950953 ttccccaaatcaaaaaattacaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 17951051  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||| | |||||   |  ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  17951052 aaaatgatgggaggtggtcatttgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 17951151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 35174674 - 35174974
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  35174674 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 35174773  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  35174774 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 35174873  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||| ||| | ||||    || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||| ||||||||| ||||||||    
T  35174874 aaaataatgggaggtgatcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatatgagagtgcctgaatgtt 35174973  T
Q  489 g 489  Q
    |    
T  35174974 g 35174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 311
Target Start/End: Complemental strand, 31210431 - 31210129
Alignment:
Q  20 aatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagaga 119  Q
    ||||||||||||| |||  ||||||| | ||||||||||||  |||||| |||||||||||||||||||||   ||| ||| |||||||| ||||||  |    
T  31210431 aatcaatttagtccctccgtccaatttgggtgttaacggtgttgacgtggccgttaacctctcacatgggtcttcatgtcatatgccacacaagcaggaa 31210332  T
Q  120 ctaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaa---atat-------acaaa 209  Q
    ||||| ||| ||| | | |||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||| ||||||    |||        ||||    
T  31210331 ctaatttggccgataataaccaaaattttcaaggactaaattgattgatttgtagaaaatgctttgctctttctccctcaacggttatttcttccccaaa 31210232  T
Q  210 -attggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagctt 308  Q
     |||| || |||||||||||||| ||||||||||||||||||||  | ||||| |  | ||||||||||||||||| ||||||||||||||||||| |||    
T  31210231 tattgaaaacctaattttacaatctgtaatctacactccaaaatctcaaaaatattatccaataattagtggtaactttcttccccaattcaaaaaactt 31210132  T
Q  309 caa 311  Q
    |||    
T  31210131 caa 31210129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 187 - 483
Target Start/End: Complemental strand, 17936339 - 17936042
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    |||||||||||||||| || ||||||| |||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  17936339 tctttcttcctcaaatctataaaattgaaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 17936240  T
Q  287 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 386  Q
    | || || | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  17936239 tattgcctacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 17936140  T
Q  387 ctgaaatgatgaggggtgggtgtaagggc-aaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 483  Q
    | ||||||||| | |||||  ||| |||| |||| || || | |||||| ||||| ||||| ||  |  ||||||||||||||||| ||| |||||||    
T  17936139 ccgaaatgatgggtggtggacgtatgggcaaaaaacagttctcaaagtcgagcttcatcttcaaaatttatgtttaatggtgatgtcagaatgcttga 17936042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 189 - 489
Target Start/End: Complemental strand, 34345123 - 34344824
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    ||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  34345123 tttcttcctaaaatatataaaattggaaccctaactttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 34345024  T
Q  289 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 388  Q
    |||||| | | |||||  | |||||||||||        |||| ||  ||||  |||||||  |||||||  || |||||||| |||| || ||||||||    
T  34345023 ttccccgaataaaaaaattgcaaaccctaattttttttaattggatatgaaaaccaaaatctgcaaaattcatttaagcaaaagtgttgaaattgaatct 34344924  T
Q  389 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 488  Q
     |||||||  |||||||   || ||||||||  |  ||| |||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||||||    
T  34344923 aaaatgat-tggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcaacttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 34344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 4289710 - 4289838
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 288  Q
    |||||||| |||||||| |||||||||| |||||||||||||| ||||||||| ||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  4289710 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctatactccaaaatctccaaattttcttccaataattaagggtcacgttc 4289809  T
Q  289 ttccccaattcaaaaagcttcaaacccta 317  Q
    |||||||| |||||||  | |||||||||    
T  4289810 ttccccaaatcaaaaaattgcaaacccta 4289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 33277101 - 33277234
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    ||||||||||| ||||||||| ||| |||||||||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |  |||     
T  33277101 gctctttcttc-tcaaatatataaatttggaaccctgattttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatattaaa 33277199  T
Q  285 gttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    |||||||||||||||||||| ||| ||||||||||    
T  33277200 gttcttccccaattcaaaaaacttaaaaccctaat 33277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 7371453 - 7371586
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  7371453 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 7371552  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    ||||||||||||||||||| ||| ||||||||||    
T  7371553 ttcttccccaattcaaaaaacttaaaaccctaat 7371586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 25170430 - 25170547
Alignment:
Q  53 taacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaag 152  Q
    ||||||||  || ||| ||||||||||||||||| ||||||||| |||||||||||| |||||   |||||  ||||||| |||||| |||| || ||||    
T  25170430 taacggtgatgatgtggccgttaacctctcacattggttgccatgtcagatgccacataagcatgaactaaattggtcgatagtgacaaaaaatttcaag 25170529  T
Q  153 gatcaaattaattgattt 170  Q
    ||  ||||| ||||||||    
T  25170530 gacgaaattgattgattt 25170547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 30639903 - 30640027
Alignment:
Q  187 tctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 286  Q
    ||||||||||| || | || |||||||||||| |||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   ||    
T  30639903 tctttcttccttaattgtataaaattggaaccataattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagt 30640002  T
Q  287 tcttccccaattcaaaaagcttcaa 311  Q
    ||||||  |||||||||| ||||||    
T  30640003 tcttccataattcaaaaaacttcaa 30640027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 33267342 - 33267419
Alignment:
Q  189 tttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 266  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||||||||    
T  33267342 tttcttccccaaatatacaaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttctt 33267419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 11356922 - 11356803
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  11356922 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 11356823  T
Q  285 gttcttccccaattcaaaaa 304  Q
    ||||||||||||||||||||    
T  11356822 gttcttccccaattcaaaaa 11356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 191 - 419
Target Start/End: Complemental strand, 38082 - 37856
Alignment:
Q  191 tcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 290  Q
    |||||| ||||| || |||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  38082 tcttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttctt 37983  T
Q  291 ccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 389  Q
    |||||||| ||| | | ||||||||||||        ||||||||||||||   |||||| |||||||| |||||| ||||| ||||  | |||||||||    
T  37982 ccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaaatcaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaatctg 37885  T
Q  390 aaatgatgaggggtgggtgtaagggcaaaa 419  Q
    ||||||||| ||||||||||| ||||||||    
T  37884 aaatgatga-gggtgggtgtatgggcaaaa 37856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 38241 - 38166
Alignment:
Q  49 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaat 124  Q
    |||||||||| || ||| || |||||||||||||||||||  |||||| ||| | |||||| |||||| |||||||    
T  38241 gtgttaacggagctgacttggccgttaacctctcacatggactgccatgtcaaacgccacacaagcagggactaat 38166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 406
Target Start/End: Original strand, 57669 - 57890
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||||||| |||||| ||| ||| || ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  57669 gctctttcttccccaaatatataaaattgaaaccctgattatactatctgtaatctacactccaaaataaccaaaatttcttcgaataataagtggtaac 57768  T
Q  285 gttcttcc-ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 383  Q
     ||||||| | |||||||||| ||||||||||| ||        |||||||| ||||| |||||||   ||||||||||  ||||||| | || || |||    
T  57769 attcttcctctaattcaaaaaacttcaaaccct-atttttttttattgaatctgaaatccaaaatccaaaaaatttctttcagcaaaactattgaaattg 57867  T
Q  384 aatctgaaatgatgaggggtggg 406  Q
    |||| ||||| ||||||||||||    
T  57868 aatccgaaatcatgaggggtggg 57890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 2710 - 2643
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaat 252  Q
    |||||||||||| |||||||| |||| |||||| |||||| ||| |||||||||||||||||||||||    
T  2710 gctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaat 2643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 2356 - 2423
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaat 252  Q
    |||||||||||| |||||||| |||||||||||||| ||| ||| ||  |||||||||||||||||||    
T  2356 gctctttcttccccaaatatataaaattggaaccctcattatactatcagtaatctacactccaaaat 2423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 4446 - 4574
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||| ||||||| || ||||||||||| ||||||||||||| ||| ||||| | |  |||||  |||||| ||||| || |||||  ||  |||    
T  4446 gctctttctttctcaaatctataaaattggaactctaattttacaatttgtcatctagagtttaaaatctccaaaa-ttcttccattaattgatgacaac 4544  T
Q  285 gttcttccccaattcaaaaagcttcaaacc 314  Q
    |||||||| |||| | |||| |||||||||    
T  4545 gttcttcctcaatgctaaaaacttcaaacc 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 4327 - 4407
Alignment:
Q  98 tcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaat 179  Q
    ||||||| |||| ||||| | |||||| || |||| |||||| ||||||||||| || |||||| ||||||| |||||||||    
T  4327 tcagatgtcacacaagcatatactaatttgatcgaaagtgac-aaaatttccaacgaccaaattgattgattagtagaaaat 4407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 9666 - 9533
Alignment:
Q  186 ctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 285  Q
    ||||||||||| |||||||| ||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  9666 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 9567  T
Q  286 ttcttccccaattcaaaaagcttcaaaccctaat 319  Q
    || |||||||||||||||| ||| ||||||||||    
T  9566 tttttccccaattcaaaaaacttaaaaccctaat 9533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 1283 - 1164
Alignment:
Q  185 gctctttcttcctcaaatatacaaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 284  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  1283 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 1184  T
Q  285 gttcttccccaattcaaaaa 304  Q
    ||||||||||||||||||||    
T  1183 gttcttccccaattcaaaaa 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 6031 - 5947
Alignment:
Q  39 tccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaa 123  Q
    |||| |||| ||||||||||||  |||||| | |||||| ||||| |||| ||||||| ||| | |||||| |||||| ||||||    
T  6031 tccatttggggtgttaacggtgatgacgtggctgttaacatctcagatggattgccatgtcaaacgccacataagcagggactaa 5947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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