View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6997_high_3 (Length: 514)
Name: NF6997_high_3
Description: NF6997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6997_high_3 |
 |  |
|
| [»] scaffold0613 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 466; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 7 - 496
Target Start/End: Complemental strand, 30249939 - 30249450
Alignment:
| Q |
7 |
tcgaagaaaatatcaccattcttccctactccaattggttcctcaatataggagggcaaaggtccaatagtgaagagtttagtccatgattcactcactc |
106 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30249939 |
tcgaagaatatatcaccattcttccctactccaataggttcctcaatataggagggcaaaggtccaatagtgaagagtttagtccatgattcactcactc |
30249840 |
T |
 |
| Q |
107 |
caagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatcaaagcgatggacccatttaacatcaccaatagtgccatcatacc |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30249839 |
caagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatcaaagcgatggacccatttaacatcaccaatagtgccatcatacc |
30249740 |
T |
 |
| Q |
207 |
ataatcattgggatcctcaaaatctatttgatttattattatgggcgtgcttgttgttaaaaatacatagctgctgaggtcaaatgataccaagcaaagt |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30249739 |
ataatcattgggatcctcaaaatctatttgattcattattatgggcgtgcttgttgttaaaaatacatagctgctgaggtcaaatgataccaagcaaagt |
30249640 |
T |
 |
| Q |
307 |
tgatcatcagtttcagacaaccaatgacatattccatcattcgtgtttaatagatctctgtagtctgaacgcgaaggcatattgacatcaagttttttcc |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30249639 |
tgatcatcagtttcagacaaccaatgacatattccatcattcgtgtttaatagatctctgtagtatgaccgcgaaggcatattgacatcaagttttttcc |
30249540 |
T |
 |
| Q |
407 |
aagtgttacatcttagactataaatctccaatgctttaggattatttagacacttaataatcgtatagtcatctctaacacggttataac |
496 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30249539 |
aagtgttacatcttagactataaatctcccatgctttaggattatttagacacttaataatcgtatagtcatctctaacacggttataac |
30249450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 25628269 - 25628141
Alignment:
| Q |
64 |
aaaggtccaatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatca |
163 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||| |||||| ||| || || |||| |||||||||| |
|
|
| T |
25628269 |
aaaggtccaataatgaagagtttagtccatgattcactcacaccaagttcacctaaaactgatatgtgaaaggtggtcgtgtctccataccaagagatca |
25628170 |
T |
 |
| Q |
164 |
aagcgatggacccatttaacatcaccaat |
192 |
Q |
| |
|
|||| ||||| |||||||||||||||||| |
|
|
| T |
25628169 |
aagcaatggaaccatttaacatcaccaat |
25628141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 25627957 - 25627904
Alignment:
| Q |
382 |
ggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
25627957 |
ggcatatcgacatgaagttctttccaagtgttacatcttagactataaatctcc |
25627904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 172; Significance: 3e-92; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 10 - 213
Target Start/End: Original strand, 29352379 - 29352582
Alignment:
| Q |
10 |
aagaaaatatcaccattcttccctactccaattggttcctcaatataggagggcaaaggtccaatagtgaagagtttagtccatgattcactcactccaa |
109 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
29352379 |
aagaatatatcaccattcctccctactccaataggttcctgaatataggagggcaaaggtccaatagtgaagagtttagtccatgattcactcacaccaa |
29352478 |
T |
 |
| Q |
110 |
gttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatcaaagcgatggacccatttaacatcaccaatagtgccatcataccata |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
29352479 |
gttcacctaaaattaatatgtcaaaggtagtcttgcctacataccaagagatcaaagcgatggacccatttaacatcaccaatcgtgccaccataccata |
29352578 |
T |
 |
| Q |
210 |
atca |
213 |
Q |
| |
|
|||| |
|
|
| T |
29352579 |
atca |
29352582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 34325444 - 34325261
Alignment:
| Q |
7 |
tcgaagaaaatatcaccattcttccctactccaattggttcctcaatataggagggcaaaggtccaatagtgaagagtttagtccatgattcactc-act |
105 |
Q |
| |
|
||||| || |||||||||||| ||| | ||||||| || |||||| ||| |||| |||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
34325444 |
tcgaaaaatatatcaccattcctccttgctccaataagtctctcaatgtagaagggaaaaggtccaatagtgaagagcttagtccatgattcactcaaca |
34325345 |
T |
 |
| Q |
106 |
ccaagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatcaaagcgatggacccatttaacatcacc |
189 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| | | ||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34325344 |
ccaagttcacctaaaatcgatatgtcaaaggtagtcgtttttggataccaagagatcaaagcgatggacccatttaacaccacc |
34325261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 240 - 435
Target Start/End: Complemental strand, 34325234 - 34325045
Alignment:
| Q |
240 |
tattattatgggcgtgcttgttgttaaaaatacatagctgctgaggtcaaatgataccaagcaaagttgatcatcagtttcagacaaccaatgacatatt |
339 |
Q |
| |
|
|||| |||||||| |||||||||| ||| | |||||||||||||||||||| |||||||| |||||||||||||| | | |||||||||||| ||| |
|
|
| T |
34325234 |
tattgttatgggcttgcttgttgtaaaatacacatagctgctgaggtcaaacgataccaacaaaagttgatcatcatt---actcaaccaatgacaaatt |
34325138 |
T |
 |
| Q |
340 |
ccatcattcgtgtttaatagatctctgtagtctgaacgcgaaggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||||||||| ||||| || | ||| | | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
34325137 |
ccatcattcgtgtataatatatgtttgtt---tatatccgaaggcatattgacatcaagtttttcccaagtgttacatcttaaactataaatctcc |
34325045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 358
Target Start/End: Original strand, 29352603 - 29352715
Alignment:
| Q |
246 |
tatgggcgtgcttgttgttaaaaatacatagctgctgaggtcaaatgataccaagcaaagttgatcatcagtttcagacaaccaatgacatattccatca |
345 |
Q |
| |
|
|||||||||| | ||||| ||| | ||||||||||| |||||||| |||||||| ||||||||||||| | ||| | |||||||||||| ||||||||| |
|
|
| T |
29352603 |
tatgggcgtgttcgttgtaaaatacacatagctgctaaggtcaaacgataccaaccaaagttgatcattatttttactcaaccaatgacaaattccatca |
29352702 |
T |
 |
| Q |
346 |
ttcgtgtttaata |
358 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
29352703 |
ttcgtgtataata |
29352715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 29352756 - 29352810
Alignment:
| Q |
381 |
aggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
29352756 |
aggcagatcgacatcaagtttttcccaagtgttacatcttaaactataaatctcc |
29352810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 44912813 - 44912867
Alignment:
| Q |
381 |
aggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||||||| ||||||||| |||||| |||||| ||||| |||||||||||| |
|
|
| T |
44912813 |
aggcatattgatatcaagtttactccaagagttacaccttaggctataaatctcc |
44912867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 44938120 - 44938174
Alignment:
| Q |
381 |
aggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||| |||| |||||||||||| |
|
|
| T |
44938120 |
aggcatattgacatcaagtttcttccaagaattacaccttaagctataaatctcc |
44938174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 44937806 - 44937867
Alignment:
| Q |
79 |
aagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagt |
140 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||||| |||||| |||||| ||| ||||| |
|
|
| T |
44937806 |
aagagtttagtccatgattctttcacgccgagttcacccaaaattgatatgtgaaaagtagt |
44937867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 435
Target Start/End: Complemental strand, 4028035 - 4027621
Alignment:
| Q |
9 |
gaagaaaatatcaccattcttccctactccaattggttcctcaatataggagggcaaaggtccaatagtgaagagtttagtccatgattcactcactcca |
108 |
Q |
| |
|
|||||| |||||||||||| ||||| ||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4028035 |
gaagaatatatcaccattcctccctgctccaataggtctctcaatagagaagggaaaaggtccaatagtgaagagtttagtccatgattcactcacacca |
4027936 |
T |
 |
| Q |
109 |
agttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatcaaagcgatggacccatttaacatcaccaatagtgccatcataccat |
208 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | | ||| |||||||||||||| |||||||||||||||| |||| || ||||| |||||||| |
|
|
| T |
4027935 |
agttcacctaaaatcgatatgtcaaaggtagtcgtttttggataccaagagatcaaagcaatggacccatttaacaccaccgattgtgccgccataccat |
4027836 |
T |
 |
| Q |
209 |
a---atcattgggatcctcaaaatctatttgatttattattatgggcgtgcttgttgttaaaaatacatagctgctgaggtcaaatgataccaagcaaag |
305 |
Q |
| |
|
| | ||||| ||| ||| | | |||| ||||||||||||||||||| ||| | |||||||||||||||||||| ||||| || ||||| |
|
|
| T |
4027835 |
atttaaaattggcatc-------tcttgtgg--gtattgttatgggcgtgcttgttgtaaaatacacatagctgctgaggtcaaacgatactaaccaaag |
4027745 |
T |
 |
| Q |
306 |
ttgatcatcagtttcagacaaccaatgacatattccatcattcgtgtttaatagatctctgtagtctgaacgcgaaggcatattgacatcaagttttttc |
405 |
Q |
| |
|
| |||||||| | | ||||||||||| |||||||||||||||| ||||| || | | || || | |||| ||||||||||||||||||||| | |
|
|
| T |
4027744 |
tcgatcatca---ttatttaaccaatgacaaattccatcattcgtgtataatatatgt---tggtttgtatccgaaagcatattgacatcaagtttttcc |
4027651 |
T |
 |
| Q |
406 |
caagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |
|
|
| T |
4027650 |
caagtgttacatcttaaactataaatctcc |
4027621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 496
Target Start/End: Complemental strand, 4027531 - 4027488
Alignment:
| Q |
453 |
tagacacttaataatcgtatagtcatctctaacacggttataac |
496 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
4027531 |
tagacacctaataatcttatagtcatctctaacacggtcataac |
4027488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 30651645 - 30651516
Alignment:
| Q |
63 |
caaaggtccaatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatc |
162 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| | |||||| |||||| ||| | || |||| ||||||||| |
|
|
| T |
30651645 |
caaaggtccaataataaagagtttagtccatgattcactcacaccaagttcacctaaaactgatatgtgaaaggtggtcgtatcttcataccaagagatc |
30651546 |
T |
 |
| Q |
163 |
aaagcgatggacccatttaacatcaccaat |
192 |
Q |
| |
|
||||| ||||| |||||||||||||||||| |
|
|
| T |
30651545 |
aaagcaatggaaccatttaacatcaccaat |
30651516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 31777991 - 31777862
Alignment:
| Q |
63 |
caaaggtccaatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatc |
162 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| | |||||| |||||| | | || | |||| ||||||||| |
|
|
| T |
31777991 |
caaaggtccaataataaagagtttagtccatgattcactcacaccaagttcacctaaaactgatatgtgaaaggtggccgtgtattcataccaagagatc |
31777892 |
T |
 |
| Q |
163 |
aaagcgatggacccatttaacatcaccaat |
192 |
Q |
| |
|
||||| ||||| |||||||||||||||||| |
|
|
| T |
31777891 |
aaagcaatggaaccatttaacatcaccaat |
31777862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 30651329 - 30651279
Alignment:
| Q |
385 |
atattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
|||| ||||| ||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
30651329 |
atatcgacatgaagttattcccaagtgttacatcttaaactataaatctcc |
30651279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 31777675 - 31777625
Alignment:
| Q |
385 |
atattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
|||| ||||| ||||| || |||||||||||||| |||||||||||||||| |
|
|
| T |
31777675 |
atatcgacatgaagttcttcccaagtgttacatcgtagactataaatctcc |
31777625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 42637352 - 42637420
Alignment:
| Q |
72 |
aatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagt |
140 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| || | |||||| |||||| |||||| ||| ||||| |
|
|
| T |
42637352 |
aatagtgaagagtttggtccatgattccttcaccccgacttcacccaaaattgatatgtgaaaagtagt |
42637420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 4877607 - 4877553
Alignment:
| Q |
381 |
aggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
4877607 |
aggcatattgaaatcaagtttcttccaagagttacttcttagactataaatctcc |
4877553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 20426368 - 20426314
Alignment:
| Q |
381 |
aggcatattgacatcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||||||| |||||||||| |||||| ||||||||||| |||||||||||| |
|
|
| T |
20426368 |
aggcatattgaaatcaagttttctccaagagttacatcttacgctataaatctcc |
20426314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 48741982 - 48742055
Alignment:
| Q |
67 |
ggtccaatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagt |
140 |
Q |
| |
|
||||||| | |||||||||||||||| ||||| |||| || ||||||||||||||| ||||| ||||||||| |
|
|
| T |
48741982 |
ggtccaaaaatgaagagtttagtccaagattccttcacaccgagttcacctaaaattgatatgcaaaaggtagt |
48742055 |
T |
 |
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Target: scaffold0613 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0613
Description:
Target: scaffold0613; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 276 - 160
Alignment:
| Q |
67 |
ggtccaatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagagatcaaag |
166 |
Q |
| |
|
||||||||||||||| | || |||||||||||| || ||||| |||||| |||||| |||||| ||| |||||| | ||||| | |||||||||| | |
|
|
| T |
276 |
ggtccaatagtgaagtgattggtccatgattcattctttccaatttcacccaaaattgatatgtgaaaagtagtccttggtacatgataagagatcaatg |
177 |
T |
 |
| Q |
167 |
cgatggacccatttaac |
183 |
Q |
| |
|
| ||| || |||||||| |
|
|
| T |
176 |
caatgcactcatttaac |
160 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 435
Target Start/End: Complemental strand, 13477635 - 13477593
Alignment:
| Q |
392 |
catcaagttttttccaagtgttacatcttagactataaatctcc |
435 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
13477635 |
catcaagttttctc-aagtgttacatcttagactataaatctcc |
13477593 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 32744853 - 32744976
Alignment:
| Q |
61 |
ggcaaaggtccaatagtgaagagtttagtccatgattcactcactccaagttcacctaaaattaatatgtcaaaggtagtcttgcctacataacaagaga |
160 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||| ||| |||| ||||| | |||| |||||| ||| |||||| | | ||||| | |||| |
|
|
| T |
32744853 |
ggcaatggtccaatagtgaagagattggtccatgattctttcataccaatctcacccataattgatatgtgaaaagtagtcgtcttttcataatatgaga |
32744952 |
T |
 |
| Q |
161 |
tcaaagcgatggacccatttaaca |
184 |
Q |
| |
|
|||| || |||||||||||||||| |
|
|
| T |
32744953 |
tcaatgcaatggacccatttaaca |
32744976 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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