View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6997_low_9 (Length: 253)
Name: NF6997_low_9
Description: NF6997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6997_low_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 27566010 - 27566252
Alignment:
| Q |
16 |
atcaacttataaggtgataaatatatttcgcctataaatacattcttttaactatatcttatccaatatgaaaattagggtatctcatctcattaataac |
115 |
Q |
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| T |
27566010 |
atcaacttgtaaggtgataaatatatttcgcctataaacacatttttttaactaaatcttatccaatatgaaaattagggtatctcatctcattaataac |
27566109 |
T |
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| Q |
116 |
aatgtgtct----atataggaagaattcaaaggacacataatccctttgcaccaagatttctaactaggggtctacc-aaaaattatctttaggaccaag |
210 |
Q |
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| T |
27566110 |
aatgtgtctatgcatataggaagaattcaaaggacacataatccctttgcaccaagatttctaactaggggtctaccaaaaaattatctttaggaccaag |
27566209 |
T |
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| Q |
211 |
ttttccaactatggggctccatgtaataatagctacccttata |
253 |
Q |
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| T |
27566210 |
ttttccaactatggggctccatgtaataatagctacccttata |
27566252 |
T |
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