View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7002_low_4 (Length: 605)

Name: NF7002_low_4
Description: NF7002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7002_low_4
NF7002_low_4
[»] chr6 (33 HSPs)
chr6 (259-572)||(15576375-15576688)
chr6 (21-176)||(15576189-15576344)
chr6 (326-568)||(15574462-15574708)
chr6 (86-236)||(16527772-16527913)
chr6 (329-506)||(16526916-16527093)
chr6 (108-236)||(1755666-1755794)
chr6 (330-475)||(12972738-12972883)
chr6 (86-175)||(30355260-30355349)
chr6 (119-236)||(12972509-12972626)
chr6 (93-192)||(15574842-15574941)
chr6 (258-393)||(17860693-17860828)
chr6 (129-177)||(12974270-12974318)
chr6 (35-86)||(13194291-13194342)
chr6 (570-605)||(13490191-13490226)
chr6 (571-605)||(5994698-5994732)
chr6 (514-568)||(17860886-17860940)
chr6 (572-605)||(5004061-5004094)
chr6 (572-605)||(5489151-5489184)
chr6 (171-216)||(7837121-7837166)
chr6 (366-486)||(8322602-8322722)
chr6 (572-605)||(23925335-23925368)
chr6 (572-605)||(25550295-25550328)
chr6 (572-605)||(30824561-30824594)
chr6 (572-605)||(35091708-35091741)
chr6 (171-211)||(17695705-17695745)
chr6 (571-605)||(11053701-11053735)
chr6 (571-605)||(15391643-15391677)
chr6 (571-605)||(33298084-33298118)
chr6 (16-85)||(6091920-6091989)
chr6 (572-605)||(11279837-11279870)
chr6 (572-605)||(13825703-13825736)
chr6 (572-605)||(25506573-25506606)
chr6 (171-211)||(11126599-11126639)
[»] chr5 (45 HSPs)
chr5 (108-487)||(24841367-24841754)
chr5 (256-497)||(11274630-11274871)
chr5 (311-568)||(17027056-17027316)
chr5 (329-560)||(22754483-22754718)
chr5 (93-236)||(17027400-17027543)
chr5 (108-211)||(11274445-11274547)
chr5 (256-489)||(23125219-23125454)
chr5 (151-236)||(12029493-12029578)
chr5 (93-177)||(25594791-25594875)
chr5 (86-169)||(17382127-17382210)
chr5 (346-500)||(19331160-19331315)
chr5 (86-177)||(30072111-30072201)
chr5 (99-235)||(22754829-22754958)
chr5 (103-178)||(22967951-22968026)
chr5 (86-153)||(24517310-24517377)
chr5 (21-86)||(11273683-11273748)
chr5 (571-605)||(20372945-20372979)
chr5 (100-177)||(22229741-22229818)
chr5 (571-605)||(24956878-24956912)
chr5 (571-605)||(24965341-24965375)
chr5 (572-605)||(19223555-19223588)
chr5 (572-605)||(20398667-20398700)
chr5 (119-236)||(22643989-22644105)
chr5 (572-605)||(29186310-29186343)
chr5 (569-605)||(1728191-1728227)
chr5 (14-86)||(17768641-17768713)
chr5 (21-85)||(19571048-19571112)
chr5 (171-211)||(20860430-20860470)
chr5 (171-211)||(34133866-34133906)
chr5 (184-231)||(11274548-11274595)
chr5 (571-605)||(23350108-23350142)
chr5 (35-85)||(24518964-24519014)
chr5 (108-178)||(24846192-24846262)
chr5 (571-605)||(28852549-28852583)
chr5 (101-177)||(15205577-15205653)
chr5 (16-85)||(18451061-18451130)
chr5 (572-605)||(28843940-28843973)
chr5 (572-605)||(31410890-31410923)
chr5 (572-605)||(31421789-31421822)
chr5 (572-605)||(43598078-43598111)
chr5 (572-605)||(43603570-43603603)
chr5 (572-605)||(43609062-43609095)
chr5 (171-211)||(22938049-22938089)
chr5 (21-81)||(25682147-25682207)
chr5 (108-180)||(26070404-26070475)
[»] chr7 (51 HSPs)
chr7 (260-568)||(21471316-21471628)
chr7 (329-568)||(5721920-5722164)
chr7 (100-236)||(7494584-7494720)
chr7 (86-232)||(20470902-20471049)
chr7 (93-232)||(21471674-21471813)
chr7 (86-177)||(29544451-29544542)
chr7 (125-236)||(9761537-9761646)
chr7 (135-232)||(3269123-3269220)
chr7 (364-487)||(7955796-7955920)
chr7 (81-177)||(2632523-2632619)
chr7 (108-177)||(7142030-7142099)
chr7 (125-187)||(9801996-9802057)
chr7 (16-86)||(21544679-21544749)
chr7 (111-175)||(2353357-2353421)
chr7 (86-177)||(20446171-20446262)
chr7 (85-177)||(23124833-23124924)
chr7 (14-85)||(7494484-7494555)
chr7 (109-232)||(16536689-16536811)
chr7 (109-236)||(16577387-16577513)
chr7 (109-236)||(16588149-16588275)
chr7 (109-232)||(16628851-16628973)
chr7 (154-236)||(1074341-1074422)
chr7 (571-605)||(4941609-4941643)
chr7 (571-605)||(10439936-10439970)
chr7 (331-483)||(1074076-1074229)
chr7 (175-236)||(7956058-7956119)
chr7 (572-605)||(12978455-12978488)
chr7 (572-605)||(18304424-18304457)
chr7 (119-176)||(18496498-18496555)
chr7 (125-177)||(21545929-21545984)
chr7 (18-86)||(7143571-7143639)
chr7 (14-86)||(7776350-7776422)
chr7 (171-211)||(13287676-13287716)
chr7 (171-211)||(26137034-26137074)
chr7 (21-80)||(9071392-9071451)
chr7 (14-85)||(18494555-18494626)
chr7 (35-90)||(21473039-21473094)
chr7 (100-165)||(7815267-7815332)
chr7 (571-605)||(13839530-13839564)
chr7 (135-181)||(22532784-22532830)
chr7 (18-59)||(7152116-7152157)
chr7 (24-85)||(14074486-14074547)
chr7 (24-85)||(14384514-14384575)
chr7 (572-605)||(30244775-30244808)
chr7 (171-211)||(2506786-2506826)
chr7 (171-211)||(4596918-4596958)
chr7 (171-211)||(15170730-15170770)
chr7 (436-488)||(16166702-16166754)
chr7 (171-211)||(19154909-19154949)
chr7 (171-211)||(20754308-20754348)
chr7 (171-211)||(39270239-39270279)
[»] chr8 (47 HSPs)
chr8 (256-568)||(16052557-16052873)
chr8 (323-507)||(28901685-28901869)
chr8 (86-233)||(24120107-24120254)
chr8 (86-236)||(16052369-16052519)
chr8 (108-228)||(22894648-22894768)
chr8 (349-497)||(22894905-22895054)
chr8 (94-184)||(28252481-28252571)
chr8 (86-236)||(28901432-28901582)
chr8 (86-236)||(10866861-10867011)
chr8 (86-194)||(13082029-13082137)
chr8 (256-397)||(24119925-24120066)
chr8 (303-490)||(12755799-12755987)
chr8 (151-232)||(5570305-5570386)
chr8 (86-167)||(12956431-12956512)
chr8 (86-167)||(14977199-14977280)
chr8 (149-232)||(28973490-28973573)
chr8 (108-169)||(11310318-11310379)
chr8 (86-178)||(16054225-16054317)
chr8 (125-210)||(29291670-29291755)
chr8 (86-177)||(32239219-32239310)
chr8 (80-178)||(6358629-6358727)
chr8 (24-86)||(12957559-12957621)
chr8 (571-605)||(17664672-17664706)
chr8 (571-605)||(26873636-26873670)
chr8 (337-394)||(5570508-5570565)
chr8 (572-605)||(17683828-17683861)
chr8 (572-605)||(17973565-17973598)
chr8 (572-605)||(26876086-26876119)
chr8 (572-605)||(30938282-30938315)
chr8 (21-86)||(32240446-32240511)
chr8 (86-177)||(29047408-29047499)
chr8 (21-84)||(13305658-13305721)
chr8 (35-86)||(13803096-13803147)
chr8 (329-395)||(28292459-28292525)
chr8 (125-179)||(30851230-30851284)
chr8 (571-605)||(39837594-39837628)
chr8 (572-605)||(1407105-1407138)
chr8 (572-605)||(4839814-4839847)
chr8 (171-216)||(26829427-26829472)
chr8 (14-59)||(26853601-26853646)
chr8 (572-605)||(39845637-39845670)
chr8 (571-599)||(6670710-6670738)
chr8 (372-487)||(17099875-17099990)
chr8 (171-211)||(25180687-25180727)
chr8 (171-211)||(29765357-29765397)
chr8 (109-161)||(30543711-30543763)
chr8 (171-211)||(33878232-33878272)
[»] chr1 (42 HSPs)
chr1 (86-236)||(23223284-23223434)
chr1 (100-236)||(21451921-21452057)
chr1 (86-232)||(30675360-30675507)
chr1 (409-497)||(23223131-23223220)
chr1 (137-236)||(15299012-15299111)
chr1 (86-177)||(50047113-50047204)
chr1 (100-177)||(12424020-12424097)
chr1 (108-236)||(31313425-31313553)
chr1 (86-165)||(26657420-26657499)
chr1 (14-85)||(50048239-50048310)
chr1 (260-382)||(21452099-21452221)
chr1 (93-178)||(11770093-11770178)
chr1 (93-177)||(25730670-25730754)
chr1 (95-176)||(25777932-25778013)
chr1 (86-177)||(12810256-12810345)
chr1 (109-161)||(34935297-34935349)
chr1 (112-154)||(25266462-25266504)
chr1 (256-338)||(30675235-30675317)
chr1 (571-605)||(31548522-31548556)
chr1 (16-86)||(34522115-34522185)
chr1 (93-177)||(8247756-8247840)
chr1 (572-605)||(21498930-21498963)
chr1 (171-216)||(22624837-22624882)
chr1 (108-165)||(25965488-25965545)
chr1 (412-488)||(31313020-31313097)
chr1 (572-605)||(31539954-31539987)
chr1 (572-605)||(35104096-35104129)
chr1 (171-211)||(21914855-21914895)
chr1 (119-179)||(26101987-26102047)
chr1 (436-487)||(27754786-27754837)
chr1 (571-605)||(3432922-3432956)
chr1 (391-460)||(14397286-14397356)
chr1 (21-83)||(17836791-17836853)
chr1 (16-94)||(23224619-23224697)
chr1 (571-605)||(29221520-29221554)
chr1 (21-83)||(30676667-30676729)
chr1 (436-490)||(31313107-31313161)
chr1 (572-602)||(44320227-44320257)
chr1 (572-605)||(20314059-20314092)
chr1 (171-211)||(21912072-21912112)
chr1 (21-85)||(27682929-27682993)
chr1 (574-602)||(28457556-28457584)
[»] chr2 (45 HSPs)
chr2 (93-236)||(28278522-28278664)
chr2 (86-178)||(21505231-21505323)
chr2 (108-232)||(39730324-39730448)
chr2 (111-236)||(31449830-31449955)
chr2 (119-233)||(32276638-32276752)
chr2 (364-470)||(39730111-39730217)
chr2 (364-489)||(22389140-22389265)
chr2 (108-165)||(32619586-32619643)
chr2 (303-395)||(17415496-17415588)
chr2 (260-380)||(28278704-28278823)
chr2 (14-86)||(31000597-31000669)
chr2 (86-177)||(35707735-35707826)
chr2 (86-177)||(25473969-25474060)
chr2 (110-177)||(18236418-18236485)
chr2 (86-168)||(1733042-1733123)
chr2 (571-605)||(15944589-15944623)
chr2 (571-605)||(20621517-20621551)
chr2 (138-188)||(29769610-29769660)
chr2 (571-605)||(35138592-35138626)
chr2 (571-605)||(35146928-35146962)
chr2 (571-605)||(41233876-41233910)
chr2 (572-605)||(14582925-14582958)
chr2 (572-605)||(15953104-15953137)
chr2 (572-605)||(17687430-17687463)
chr2 (572-605)||(20372345-20372378)
chr2 (572-605)||(25483601-25483634)
chr2 (572-605)||(25491207-25491240)
chr2 (139-236)||(27918127-27918224)
chr2 (572-605)||(42249487-42249520)
chr2 (172-236)||(22388934-22388997)
chr2 (571-601)||(24292371-24292401)
chr2 (571-605)||(42565961-42565995)
chr2 (572-601)||(24285696-24285725)
chr2 (572-605)||(34070636-34070669)
chr2 (572-605)||(38168389-38168422)
chr2 (572-605)||(42574585-42574618)
chr2 (572-605)||(44372705-44372738)
chr2 (572-605)||(44388616-44388649)
chr2 (171-211)||(1504312-1504352)
chr2 (171-211)||(20379377-20379417)
chr2 (171-211)||(25873169-25873209)
chr2 (171-211)||(25886157-25886197)
chr2 (16-84)||(28455128-28455196)
chr2 (108-160)||(31914047-31914099)
chr2 (171-211)||(45456266-45456306)
[»] chr4 (33 HSPs)
chr4 (102-236)||(1676403-1676537)
chr4 (102-236)||(1682931-1683065)
chr4 (304-428)||(1696893-1697017)
chr4 (100-236)||(1696675-1696809)
chr4 (100-175)||(15192137-15192212)
chr4 (149-236)||(34850752-34850839)
chr4 (86-161)||(34864383-34864458)
chr4 (110-174)||(12111446-12111510)
chr4 (108-179)||(18897921-18897992)
chr4 (93-178)||(5906819-5906905)
chr4 (125-191)||(10576371-10576437)
chr4 (434-500)||(15787861-15787927)
chr4 (15-85)||(47023552-47023622)
chr4 (23-86)||(20717941-20718004)
chr4 (570-605)||(52295602-52295637)
chr4 (571-605)||(8094314-8094348)
chr4 (115-177)||(9288142-9288204)
chr4 (571-605)||(12996475-12996509)
chr4 (572-605)||(8103120-8103153)
chr4 (572-605)||(10638328-10638361)
chr4 (572-605)||(12428510-12428543)
chr4 (572-605)||(21532336-21532369)
chr4 (572-605)||(27343723-27343756)
chr4 (22-86)||(12840697-12840761)
chr4 (21-85)||(22219945-22220009)
chr4 (86-177)||(25315323-25315414)
chr4 (16-59)||(24580004-24580047)
chr4 (93-156)||(25050164-25050227)
chr4 (24-75)||(30797703-30797754)
chr4 (572-605)||(4523712-4523745)
chr4 (125-169)||(10320350-10320394)
chr4 (108-176)||(17339927-17339995)
chr4 (171-211)||(19826667-19826707)
[»] chr3 (43 HSPs)
chr3 (260-568)||(11520659-11520971)
chr3 (87-235)||(21017750-21017899)
chr3 (111-236)||(13911138-13911263)
chr3 (94-177)||(25919564-25919647)
chr3 (137-236)||(8402693-8402792)
chr3 (86-177)||(17637035-17637126)
chr3 (347-487)||(5632859-5633000)
chr3 (172-236)||(5632668-5632732)
chr3 (159-210)||(11521039-11521090)
chr3 (86-146)||(33914654-33914714)
chr3 (94-168)||(12573231-12573305)
chr3 (94-168)||(13549695-13549769)
chr3 (571-605)||(8197728-8197762)
chr3 (571-605)||(14538637-14538671)
chr3 (571-605)||(17919198-17919232)
chr3 (571-605)||(27341367-27341401)
chr3 (572-605)||(30508-30541)
chr3 (108-173)||(16970177-16970241)
chr3 (572-605)||(17628265-17628298)
chr3 (100-177)||(19219317-19219394)
chr3 (572-605)||(28470249-28470282)
chr3 (572-605)||(50824352-50824385)
chr3 (572-605)||(50851475-50851508)
chr3 (16-80)||(10343000-10343064)
chr3 (171-211)||(10883984-10884024)
chr3 (110-177)||(18065761-18065828)
chr3 (88-177)||(1475374-1475463)
chr3 (571-605)||(8154676-8154710)
chr3 (571-605)||(9525466-9525500)
chr3 (571-605)||(17933654-17933688)
chr3 (572-602)||(18039011-18039041)
chr3 (108-174)||(31477705-31477771)
chr3 (571-605)||(41006555-41006589)
chr3 (571-605)||(41015335-41015369)
chr3 (572-605)||(2211239-2211272)
chr3 (572-605)||(9555140-9555173)
chr3 (21-82)||(33913400-33913461)
chr3 (571-599)||(6958978-6959006)
chr3 (372-420)||(8770880-8770928)
chr3 (171-211)||(16223572-16223612)
chr3 (171-211)||(18541774-18541814)
chr3 (171-211)||(31283869-31283909)
chr3 (171-211)||(47053927-47053967)
[»] scaffold0282 (1 HSPs)
scaffold0282 (110-232)||(22661-22783)
[»] scaffold1026 (2 HSPs)
scaffold1026 (115-234)||(1952-2071)
scaffold1026 (334-470)||(2186-2323)
[»] scaffold0171 (3 HSPs)
scaffold0171 (100-177)||(6128-6205)
scaffold0171 (13-85)||(7349-7421)
scaffold0171 (108-170)||(21336-21398)
[»] scaffold0386 (2 HSPs)
scaffold0386 (101-177)||(8816-8892)
scaffold0386 (93-162)||(13170-13239)
[»] scaffold0990 (2 HSPs)
scaffold0990 (324-427)||(3134-3237)
scaffold0990 (455-507)||(3075-3127)
[»] scaffold0002 (2 HSPs)
scaffold0002 (100-177)||(446937-447014)
scaffold0002 (572-605)||(121228-121261)
[»] scaffold0188 (1 HSPs)
scaffold0188 (108-168)||(27068-27128)
[»] scaffold0015 (1 HSPs)
scaffold0015 (570-605)||(192526-192561)
[»] scaffold0016 (1 HSPs)
scaffold0016 (571-605)||(23463-23497)
[»] scaffold0991 (1 HSPs)
scaffold0991 (572-605)||(405-438)
[»] scaffold0497 (1 HSPs)
scaffold0497 (572-605)||(10993-11026)
[»] scaffold0431 (1 HSPs)
scaffold0431 (572-605)||(139-172)
[»] scaffold0156 (1 HSPs)
scaffold0156 (572-605)||(35388-35421)
[»] scaffold0111 (1 HSPs)
scaffold0111 (572-605)||(33035-33068)
[»] scaffold0083 (1 HSPs)
scaffold0083 (572-605)||(15813-15846)
[»] scaffold0048 (3 HSPs)
scaffold0048 (572-605)||(7661-7694)
scaffold0048 (171-211)||(24001-24041)
scaffold0048 (171-211)||(28239-28279)
[»] scaffold0039 (1 HSPs)
scaffold0039 (572-605)||(40865-40898)
[»] scaffold0863 (1 HSPs)
scaffold0863 (571-601)||(408-438)
[»] scaffold0210 (1 HSPs)
scaffold0210 (174-236)||(25216-25278)
[»] scaffold0044 (1 HSPs)
scaffold0044 (571-605)||(81818-81852)
[»] scaffold0027 (1 HSPs)
scaffold0027 (571-605)||(65710-65744)
[»] scaffold0222 (1 HSPs)
scaffold0222 (572-601)||(20518-20547)
[»] scaffold0209 (1 HSPs)
scaffold0209 (572-605)||(116-149)
[»] scaffold0084 (1 HSPs)
scaffold0084 (170-211)||(28544-28585)
[»] scaffold0514 (1 HSPs)
scaffold0514 (571-599)||(10946-10974)
[»] scaffold0321 (1 HSPs)
scaffold0321 (171-211)||(3841-3881)
[»] scaffold0270 (1 HSPs)
scaffold0270 (171-211)||(1054-1094)
[»] scaffold0198 (1 HSPs)
scaffold0198 (172-216)||(3979-4023)
[»] scaffold0072 (1 HSPs)
scaffold0072 (171-211)||(38382-38422)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 259 - 572
Target Start/End: Original strand, 15576375 - 15576688
Alignment:
Q  259 ttttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaacca 358  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15576375 ttttgctcagattgtcactcatcccaccgtcagacgtaactatattaccatttccatgcaagaggaacaaacttagagaagatacaattactttcaacca 15576474  T
Q  359 gataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactcagtcatcatgtgattgtaccttactatgag 458  Q
     ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15576475 aataaaattccaagatacacgtatatacctcctaaagccggtggggctggtcaaggcatttgtcacactcagccatcatgtgattgtaccttactatgag 15576574  T
Q  459 attgaagcaattctaaatagacattcaaggtctatatcaccatacacaccgaaggcattttcaaggttatcacgtggttgaggttaaggtggggtatatt 558  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15576575 attgaagcaattcgaaatagacattcaaggtctatatcaccatacacactggaggcattttcaaggttatcacgtggttgaggttaaggtggggtatatt 15576674  T
Q  559 tgagaaagtatgct 572  Q
    ||||||||||||||    
T  15576675 tgagaaagtatgct 15576688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 15576189 - 15576344
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaacaactactctaattctcatcctatttgtctttaa 120  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15576189 agaacgataaactgactactttattacttgttacgatttgatgcacttgccaatttcgtccatcaacaactcctctaattctcatcctatttgtctttaa 15576288  T
Q  121 attcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15576289 attcaaagaaaagtactaaaaacatagccaaaaatatcatatgatgctccatcatc 15576344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 326 - 568
Target Start/End: Complemental strand, 15574708 - 15574462
Alignment:
Q  326 caaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcaca 425  Q
    |||||||||||| |||||  ||||||||||||| |||  |||||||||||||| |||||| || |||||||   |||  |||||||| ||||||  ||||    
T  15574708 caaacttagagaggatactcttactttcaaccacatatgattccaagatacacatatgtatcttctaaagcttgtggcactggtcaaagcatttaccaca 15574609  T
Q  426 ctc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttca 521  Q
    ||| | |  ||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||||  ||||||||  |   |||  ||||||    
T  15574608 ctctacttgtcatgtgattgtatcttgctatgagattgaagcaattatacatagacattcaaggtttatatcattatacacacatatagaggacttttca 15574509  T
Q  522 aggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 568  Q
    ||||||| |||||| ||||||||||||||| |||||||| |||||||    
T  15574508 aggttataacgtggctgaggttaaggtgggatatatttgggaaagta 15574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 16527913 - 16527772
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| ||||||| ||||||||||      ||||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||    
T  16527913 acaactcctctaactctcatcttatttgtctt------caaagaaaagtactaaaaacatagccaaaaatattatatgatgctctgccatcacaacccca 16527820  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||||| |||||||||||||| |||   ||||||||| ||||||||    
T  16527819 aacttaaaccggttcttgtcctcaagcaac---atagcaagacgttagaat 16527772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 329 - 506
Target Start/End: Complemental strand, 16527093 - 16526916
Alignment:
Q  329 acttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc 428  Q
    |||||||||||||||  ||| ||||||||| ||| |||| |||||||||| |||||||||| ||||| |  |||| ||||||||| ||| | ||||||||    
T  16527093 acttagagaagatactcttaatttcaaccacatacaatttcaagatacacatatgtacctcttaaagtcagtggg-ctggtcaagacatatttcacactc 16526995  T
Q  429 -agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacaca 506  Q
     |||| ||||||||||||||||| |||| | ||| ||||||||||||| ||||||||||||| ||||||| || |||||    
T  16526994 cagtcgtcatgtgattgtacctttctataacattaaagcaattctaaacagacattcaaggtatatatcatcacacaca 16526916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 1755666 - 1755794
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcct 207  Q
    |||||||||| ||||||||||||||  |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||  || | ||||||    
T  1755666 tatttgtcttcaaattcaaagaaaataactaaaaacataacctgatatatcatatgatgctccgtcatcacaaccccaaacttaaactattacctgtcct 1755765  T
Q  208 caagaaacacaatagcaagaagttagaat 236  Q
    | || |||| ||| || ||||||||||||    
T  1755766 ctagcaacaaaattgcgagaagttagaat 1755794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 475
Target Start/End: Original strand, 12972738 - 12972883
Alignment:
Q  330 cttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc- 428  Q
    ||||||||||||||  ||||||||||| |  | ||||||||||||||| |||||| | || |||| | | | | ||||||||||||||||| |||||||     
T  12972738 cttagagaagatacccttactttcaactacttgaaattccaagatacatgtatgttcttcttaaatcag-tagtgctggtcaaggcatttgccacactcc 12972836  T
Q  429 agtcatcatgtgattgtaccttactatgagattgaagcaattctaaa 475  Q
    | |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12972837 aatcatcatgtgattgtaccttgctatgagattgaatcaattctaaa 12972883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 30355349 - 30355260
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcat 175  Q
    |||||| |||||| ||||||| |||||  ||| |||| |||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  30355349 acaacttctctaactctcatcttatttaccttcaaatgcaagtaaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcat 30355260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 12972509 - 12972626
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacaca 218  Q
    |||| |||||||||  |||||||||||| |||||||||||| |||||| ||  ||||||| ||||||||||||||  ||| ||| | || ||| | || |    
T  12972509 aaatgcaaagaaaataactaaaaacatagccaaaaatatcaaatgatgttctatcatcactaccccaaacttaaattgttgcttcttctaaagcaccaaa 12972608  T
Q  219 atagcaagaagttagaat 236  Q
    ||||||| ||||||||||    
T  12972609 atagcaacaagttagaat 12972626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 15574941 - 15574842
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaactta 191  Q
    |||||| ||||||| |||||||||| |||| ||||||||| ||||||| || ||| |||||| | |||||||||| || ||||||| |||||||||||||    
T  15574941 ctctaaatctcatcttatttgtcttcaaatgcaaagaaaaagtactaacaagatagccaaaa-tgtcatatgatgttctgtcatcataaccccaaactta 15574843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 393
Target Start/End: Original strand, 17860693 - 17860828
Alignment:
Q  258 attttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaacc 357  Q
    |||||||||||||| | | ||  |||| |||||||| ||||||  |||||  |||||||||||  |||||   |||||||| ||||  ||||||||||||    
T  17860693 attttgctcagatttttattccacccatcatcagacttaactagcttacctcttccatgcaagcggaacatttttagagaacatactcttactttcaacc 17860792  T
Q  358 agataaaattccaagatacacgtatgtacctcctaa 393  Q
    | ||| ||||| || |||||| ||||||||||||||    
T  17860793 acatacaattctaatatacacatatgtacctcctaa 17860828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 12974318 - 12974270
Alignment:
Q  129 aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  12974318 aaaagtactaaaaccatagcaaaaaatatcatatgatgctccgtcatca 12974270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 13194291 - 13194342
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||||||||||||||||||||  || |||||| |||||||||||||||    
T  13194291 actactttattacttgttacgatttggtgcacttgccaatttcgtccatcaa 13194342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 605
Target Start/End: Original strand, 13490191 - 13490226
Alignment:
Q  570 gctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||||    
T  13490191 gctgtcataccccaaattttgaccacttttctctat 13490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 5994698 - 5994732
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  5994698 ctgtcataccccaaattttgaccacttttctctat 5994732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 568
Target Start/End: Original strand, 17860886 - 17860940
Alignment:
Q  514 cattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 568  Q
    ||||||||||||||| |||||  ||||||||||||||| ||||||||| ||||||    
T  17860886 cattttcaaggttataacgtgactgaggttaaggtgggatatatttgaaaaagta 17860940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 5004061 - 5004094
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  5004061 tgtcataccccaaattttgaccacttttctctat 5004094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 5489184 - 5489151
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  5489184 tgtcataccccaaattttgaccacttttctctat 5489151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 7837166 - 7837121
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaaca 216  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||    
T  7837166 gtcatcacaacctcaaacttaaactgttacttgtcctcaagaaaca 7837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 8322722 - 8322602
Alignment:
Q  366 ttccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacact-cagtcatcatgtgattgtaccttactatgagattgaa 464  Q
    |||||||||||||||||| ||||||||||| |  | |||||||||| | ||||| || || | ||||| ||| |||| |||||||| ||||||  |||||    
T  8322722 ttccaagatacacgtatgcacctcctaaagtcagttgggctggtcacgacattt-tctcattccagtcgtcacgtgaatgtaccttgctatgaatttgaa 8322624  T
Q  465 gcaattctaaatagacattcaa 486  Q
     ||||||||||  |||||||||    
T  8322623 acaattctaaacggacattcaa 8322602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 23925335 - 23925368
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  23925335 tgtcataccccaaattttgaccacttttctctat 23925368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 25550295 - 25550328
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  25550295 tgtcataccccaaattttgaccacttttctctat 25550328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 30824594 - 30824561
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  30824594 tgtcataccccaaattttgaccacttttctctat 30824561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 35091741 - 35091708
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  35091741 tgtcataccccaaattttgaccacttttctctat 35091708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 17695745 - 17695705
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  17695745 gtcatcacaaccccaaacttaaaccattccttgtcctcaag 17695705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 11053701 - 11053735
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||| |||||    
T  11053701 ctgtcataccccaaattttgaccacttttttctat 11053735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 15391677 - 15391643
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||| ||||||||||||||||||||||||||    
T  15391677 ctgtcatatcccaaattttgaccacttttctctat 15391643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 33298084 - 33298118
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||| ||||||||||||||||||||    
T  33298084 ctgtcataccccaacttttgaccacttttctctat 33298118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 6091989 - 6091920
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||| |||||||||| ||  ||||||||||| || ||||||||| ||| |||||  ||||||||||||||    
T  6091989 tgtggagaacgataaactttctactttattattttttacgatttaatgcacttgtcaatttcgtccatca 6091920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 11279837 - 11279870
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  11279837 tgtcataccccaaattttgaccactttcctctat 11279870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 13825703 - 13825736
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||| |||||||||||||    
T  13825703 tgtcataccccaaattttgatcacttttctctat 13825736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 25506606 - 25506573
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||| |||||||||||||    
T  25506606 tgtcataccccaaattttgatcacttttctctat 25506573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 11126599 - 11126639
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| ||||| |||||||||    
T  11126599 gtcatcacaaccccaaacttgaaccatttctagtcctcaag 11126639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 7e-63; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 108 - 487
Target Start/End: Complemental strand, 24841754 - 24841367
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcct 207  Q
    |||||||||| |||| ||||||| ||||||||||||||| | |||||| ||||||||||||| ||||||||||||||| || || || ||| ||||||||    
T  24841754 tatttgtcttcaaatgcaaagaatagtactaaaaacatagcaaaaaatgtcatatgatgctctgtcatcacaaccccatacgtacactgttgcttgtcct 24841655  T
Q  208 caagaaacacaatagcaagaagttagaat--------aggaaaa--taccttctgctcagattttgctcagattgtcactcatcccaccatcagacgtaa 297  Q
    |||||||||||||| ||||||||||||||        |  ||||  ||| |||  |  |||||| ||||||||||| | || || ||| ||| ||| | |    
T  24841654 caagaaacacaataacaagaagttagaatttacattaattaaaacatacattcc-cggagattt-gctcagattgttattcttctcactatctgacttga 24841557  T
Q  298 ctatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagcc 397  Q
    |||  |||||| |||||||||||  ||| || ||||| ||||||||  ||||||||||||| ||| ||||||||||||||| |||||| | |||||||      
T  24841556 ctagcttaccacttccatgcaagtagaagaagcttagggaagatactcttactttcaaccacatacaattccaagatacacatatgtatcacctaaagaa 24841457  T
Q  398 gatggggctggtcaaggcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 487  Q
    | ||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  24841456 g-tggggctggtcaagggatttgtcacactttagtcatcatgtgattggaccttactatgagattgaagcaattctaaacaaacattcaag 24841367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 256 - 497
Target Start/End: Original strand, 11274630 - 11274871
Alignment:
Q  256 agattttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaa 355  Q
    |||||||||||| ||||||| || | |||||||||||| ||||||  ||||   || ||||||||  ||||| |||| ||||||||||  ||||||||||    
T  11274630 agattttgctcatattgtcattctttccaccatcagacttaactagcttactgctttcatgcaagcagaacagactttgagaagatacttttactttcaa 11274729  T
Q  356 ccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-agtcatcatgtgattgtaccttacta 454  Q
    ||| ||| ||||||||||||||| || ||| ||||||||||| | |||| |||||||||| |||||||||||| |||  |||||||||| ||||||||||    
T  11274730 ccacatacaattccaagatacacataggtatctcctaaagcc-agggggatggtcaaggcgtttgtcacactctagttgtcatgtgattttaccttacta 11274828  T
Q  455 tgagattgaagcaattctaaatagacattcaaggtctatatca 497  Q
    ||| |||||||| |||| ||| | ||||||||||| |||||||    
T  11274829 tgaaattgaagcgattccaaacaaacattcaaggtatatatca 11274871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 311 - 568
Target Start/End: Complemental strand, 17027316 - 17027056
Alignment:
Q  311 tccatgcaagatgaacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtc 410  Q
    ||||||||||  ||||| | |||||||||||||  ||| |||||||||  || |||||||||||||| ||||||||||||||||||   |||||||| ||    
T  17027316 tccatgcaagcggaacacagttagagaagatactcttattttcaaccacgtacaattccaagatacatgtatgtacctcctaaagctagtggggctgatc 17027217  T
Q  411 aaggcatttgtcacact-cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac-- 507  Q
    || |||||||||| ||| ||||| |||||||||||| |||| |||||| ||| |||||||| |||| ||||| ||||||| | ||||| || ||||||      
T  17027216 aatgcatttgtcatactccagtcgtcatgtgattgttccttcctatgacatttaagcaattataaacagacactcaaggtatttatcatcacacacacat 17027117  T
Q  508 cgaaggcattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 568  Q
      ||||| |||| |||||||| || || |||||||||||||||| || |||||||||||||    
T  17027116 ataaggccttttaaaggttataacatgattgaggttaaggtgggatacatttgagaaagta 17027056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 329 - 560
Target Start/End: Complemental strand, 22754718 - 22754483
Alignment:
Q  329 acttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacact- 427  Q
    ||||||||| ||||   ||||||||||||| |||| ||||||||||||||||||||||||||||||| | || ||| ||||||| ||||||| ||||||     
T  22754718 acttagagaggatattcttactttcaaccatataatattccaagatacacgtatgtacctcctaaagtcaatagggttggtcaaagcatttgccacactc 22754619  T
Q  428 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca----ccatacacaccgaaggcattttcaag 523  Q
    ||||| ||||||||||||||||| |||| ||||||||| ||||||||| || |||||||||| || ||||     || ||| || || | || |||||||    
T  22754618 cagtcgtcatgtgattgtaccttgctataagattgaagaaattctaaacaggcattcaaggtatacatcatttcacacacatacagaggaca-tttcaag 22754520  T
Q  524 gttatcacgtggttgaggttaaggtggggtatatttg 560  Q
    ||||| |||||| ||||||||||||||| || |||||    
T  22754519 gttataacgtggctgaggttaaggtgggataaatttg 22754483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 17027543 - 17027400
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaa 192  Q
    |||||| ||||||| || |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||    
T  17027543 ctctaactctcatcttaattgtctttaaatgcaaagaaaagtactaaaaacatagccaaaaatgtcatatgatgctccctcgtcacaaccccaaacttaa 17027444  T
Q  193 accgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
      | || ||| |||||||| |||||| |||||| ||||||||||    
T  17027443 gtcattgcttatcctcaagcaacacattagcaaaaagttagaat 17027400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 11274445 - 11274547
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcct 207  Q
    |||| |||||||||| ||||||||||||||||||| ||| | |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  11274445 tattggtctttaaatgcaaagaaaagtactaaaaa-atagcaaaaaatatcaaatgatgctccttcatcacaaccccaaacttaaaccgttgcttgtcct 11274543  T
Q  208 caag 211  Q
    ||||    
T  11274544 caag 11274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 256 - 489
Target Start/End: Original strand, 23125219 - 23125454
Alignment:
Q  256 agattttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagataca-attactttca 354  Q
    ||||| |||||| ||||||| || ||||||   ||||| | ||||  |||||| |||||||||||  | |||| ||||||||||||||  ||||||| ||    
T  23125219 agattgtgctcatattgtcattcttcccacttccagacttgactaacttaccacttccatgcaagcgggacaagcttagagaagatacttattacttcca 23125318  T
Q  355 accagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-agtcatcatgtgattgtaccttact 453  Q
    | ||  || ||||||||||||||| |||||||||| |||||    ||||| ||||||||| | ||| ||||||| |||  |||||||||||||| || ||    
T  23125319 atcacttacaattccaagatacacatatgtacctcataaagatagtggggttggtcaaggaacttgccacactccagttgtcatgtgattgtactttgct 23125418  T
Q  454 atgagattgaagcaattctaaatagacattcaaggt 489  Q
     |||||||||| |||||||||| | ||| |||||||    
T  23125419 gtgagattgaaacaattctaaacatacactcaaggt 23125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 12029578 - 12029493
Alignment:
Q  151 aaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||||||||||||| |||||||||||||||||||||||   ||| ||||||||||| |||| ||||| ||||||| |||||    
T  12029578 aaaatatcatatgatgctcggtcatcacaaccccaaacttaaaatattttttgtcctcaagtaacaaaatagaaagaagtaagaat 12029493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 25594791 - 25594875
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| |||||||||| |||| |||| |||||||||||||||||| |||||||||  ||||||||||| |||||||    
T  25594791 ctctaactctcatcttatttgtcttcaaatgcaaataaaagtactaaaaacatagccaaaaataatatatgatgctctgtcatca 25594875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 17382127 - 17382210
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    |||||| |||||| ||||||| |||||||||| |||| |||| |||||||||||| ||||| | ||||||||||||||||||||    
T  17382127 acaactcctctaactctcatcttatttgtcttcaaatgcaaaaaaaagtactaaacacatagcaaaaaatatcatatgatgctc 17382210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 346 - 500
Target Start/End: Complemental strand, 19331315 - 19331160
Alignment:
Q  346 ttactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-agtcatcatgtgattg 444  Q
    |||||||||||||  || |||||||| |||||| |||||||||||||||  |  |  || |||| || ||||||||||||||| || | ||||||||||     
T  19331315 ttactttcaaccacttacaattccaaaatacacatatgtacctcctaaaatcagtatggttggtgaaagcatttgtcacactccagccgtcatgtgattc 19331216  T
Q  445 taccttactatgagattgaagcaattctaaatagacattcaaggtctatatcacca 500  Q
    |||||| || |||||||||||||||| || | ||||||||||| |  |||||||||    
T  19331215 taccttgctttgagattgaagcaattatatagagacattcaagatacatatcacca 19331160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 30072201 - 30072111
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||||||||||| |||||||||| |||| |||||||||||||| |||||||| || |||||| || |||||| ||||||||||    
T  30072201 acaactcctctaattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccgtcatca 30072111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 22754958 - 22754829
Alignment:
Q  99 ttctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtt 198  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||| || ||||| ||||      |||  |||| | || ||||||||||||  |||    
T  22754958 ttctcatcttatttgtctttaaatgcaaagaaacgtactaaaaacatatcc-aaaatgtcat------ctctatcataagaaacccaaacttaaaatgtt 22754866  T
Q  199 tcttgtcctcaagaaacacaatagcaagaagttagaa 235  Q
    |||||||| |||| ||||||||||||| |||||||||    
T  22754865 tcttgtccacaagcaacacaatagcaaaaagttagaa 22754829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 22967951 - 22968026
Alignment:
Q  103 catcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||| |||||||||| | || ||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||    
T  22967951 catcttatttgtcttaacatgcaaagaaaactactaaaaacatagcctaaaatatcatatgatactccgtcatcac 22968026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 24517377 - 24517310
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaa 153  Q
    |||||| |||||||||||||| |||||||||| |||| ||||| |||| |||||||||||||| ||||    
T  24517377 acaactcctctaattctcatcttatttgtcttcaaatgcaaagcaaagaactaaaaacataactaaaa 24517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 11273748 - 11273683
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||||| || |||||||||||||||||||| |||| ||| |||||| ||||| |||||||||    
T  11273748 agaacgataaacttactactttattacttgttacaatttgatgcacttgccaattttgtccatcaa 11273683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 20372979 - 20372945
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  20372979 ctgtcataccccaaattttgaccacttttctctat 20372945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 22229818 - 22229741
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtacta-aaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||||| || |||||  |||||||||||| |||||||    
T  22229818 tctcatcttatttgtcttcaaatgcaaagaaaagtactaaaaaacatagcc-aaaatgacatatgatgctctgtcatca 22229741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 24956912 - 24956878
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  24956912 ctgtcataccccaaattttgaccacttttctctat 24956878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 24965375 - 24965341
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  24965375 ctgtcataccccaaattttgaccacttttctctat 24965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 19223555 - 19223588
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  19223555 tgtcataccccaaattttgaccacttttctctat 19223588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 20398700 - 20398667
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  20398700 tgtcataccccaaattttgaccacttttctctat 20398667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 22643989 - 22644105
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacaca 218  Q
    |||| |||||||||  |||||||| ||| | |||||||| ||||| |  ||  ||||||||| || |||||||||||||| ||| |||||||| |||| |    
T  22643989 aaatacaaagaaaataactaaaaatatacctaaaaatattatatgttattcaatcatcacaaacc-aaacttaaaccgttgcttatcctcaagcaacaaa 22644087  T
Q  219 atagcaagaagttagaat 236  Q
    || |||||||||| ||||    
T  22644088 atggcaagaagttggaat 22644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 29186343 - 29186310
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  29186343 tgtcataccccaaattttgaccacttttctctat 29186310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 569 - 605
Target Start/End: Complemental strand, 1728227 - 1728191
Alignment:
Q  569 tgctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1728227 tgctgtcataccccaaattttgaccactttcctctat 1728191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 17768641 - 17768713
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||| ||||| |||| || ||||||||||||||| |||||||||  |  |||||| |||||||||||||||    
T  17768641 cctgtggagaacaataaacttactactttattacttcttacgatttggtttacttgccaatttcgtccatcaa 17768713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 19571048 - 19571112
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||||||| || |||||||||||| ||||||||||||  || |||||| ||||| ||||||||    
T  19571048 agaacgataaacttactactttattatttgttacgatttggtgcacttgcaaatttagtccatca 19571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 20860430 - 20860470
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  20860430 gtcatcacaaccccaaacttaaactgttgcttgtcctcaag 20860470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 34133866 - 34133906
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  34133866 gtcatcacaaccccaaacttgaaccgttccttgtcctcaag 34133906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 11274548 - 11274595
Alignment:
Q  184 caaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagtt 231  Q
    ||||||||||| ||| |||||||||||| |||||| ||||||||||||    
T  11274548 caaacttaaactgttacttgtcctcaagcaacacagtagcaagaagtt 11274595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 23350142 - 23350108
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||| ||||||||||    
T  23350142 ctgtcataccccaaattttgaccatttttctctat 23350108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 24518964 - 24519014
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||||||||||||||||||||| ||  |||||| | ||||||||||||    
T  24518964 actactttattacttgttacgatttgatacacttgccagtttcgtccatca 24519014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 24846262 - 24846192
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||||||||| |||| ||||||||   |||||||| ||| || |||| ||||||| |||||||||||||||    
T  24846262 tatttgtcttcaaatgcaaagaaagtaactaaaaatatagcctaaaacatcatatcatgctccgtcatcac 24846192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 28852549 - 28852583
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| ||||||    
T  28852549 ctgtcataccccaaattttgaccactttcctctat 28852583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 15205653 - 15205577
Alignment:
Q  101 ctcatcctatttgtctttaaattcaaagaaaag-tactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| ||||||| |||| ||||  |||||||||||||  ||||| ||||||||||||||| |||||||    
T  15205653 ctcatcttatttgtatttaaatgcaaataaaaaatactaaaaacatagtcaaaa-tatcatatgatgctctgtcatca 15205577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 18451130 - 18451061
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||| |||||||||| || || |||||||||||||||||||| |  |  |||||| ||||||||||||||    
T  18451130 tgtggagaacgataaacttacaactttattacttgttacgatctggtccacttgccaatttcgtccatca 18451061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 28843940 - 28843973
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  28843940 tgtcataccccaaattttgaccactttcctctat 28843973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 31410890 - 31410923
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||| |||||||||    
T  31410890 tgtcataccccaaattttgaccacatttctctat 31410923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 31421789 - 31421822
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||| |||||||||||||||||||||||    
T  31421789 tgtcatacccaaaattttgaccacttttctctat 31421822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 43598111 - 43598078
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  43598111 tgtcataccccaaattttgaccactttcctctat 43598078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 43603603 - 43603570
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  43603603 tgtcataccccaaattttgaccactttcctctat 43603570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 43609095 - 43609062
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  43609095 tgtcataccccaaattttgaccactttcctctat 43609062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 22938049 - 22938089
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  22938049 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 22938089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 25682147 - 25682207
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtcc 81  Q
    ||||||||||  | |||| ||||||||||||||||||||  || |||||| ||||||||||    
T  25682147 agaacgataaaattactattttattacttgttacgatttagtgcacttgccaatttcgtcc 25682207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 26070475 - 26070404
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaa 180  Q
    |||||| ||| |||| |||||||||  |||||||||||| ||||||| ||||||||||| ||| |||| ||||    
T  26070475 tatttgccttaaaatgcaaagaaaataactaaaaacatagccaaaaa-atcatatgatgttccatcattacaa 26070404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 1e-55; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 260 - 568
Target Start/End: Complemental strand, 21471628 - 21471316
Alignment:
Q  260 tttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccag 359  Q
    |||||||||||||||| || |||||| |||| || | ||||  ||||||  | ||||||||  || |||||||||||| |||||  |||||||||||||     
T  21471628 tttgctcagattgtcattcctcccactatcaaacttgactagcttaccaccttcatgcaagtggatcaaacttagagaggatactcttactttcaaccac 21471529  T
Q  360 ataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacact-cagtcatcatgtgattgtaccttactatgag 458  Q
     || |||||||||||||| ||||||  |||||||| || |||||||||||||||||||||| || ||| ||||| ||||||||||||||||| |||||||    
T  21471528 gtacaattccaagatacatgtatgtgtctcctaaatccaatggggctggtcaaggcatttgccatactccagtcgtcatgtgattgtaccttgctatgag 21471429  T
Q  459 attgaagcaattctaaatagacattcaaggtctatatcaccatacacac---cgaaggcattttcaaggttatcacgtggttgaggttaaggtggggtat 555  Q
    |||||||||||||||||||||||||||| || ||||||| || ||||||   | ||||  ||||||||||||| |||||  | |||||||| | || |||    
T  21471428 attgaagcaattctaaatagacattcaatgtatatatcatcacacacacatacaaaggacttttcaaggttataacgtgactaaggttaagttaggatat 21471329  T
Q  556 atttgagaaagta 568  Q
    ||||  |||||||    
T  21471328 attttggaaagta 21471316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 329 - 568
Target Start/End: Complemental strand, 5722164 - 5721920
Alignment:
Q  329 acttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc 428  Q
    |||||||||||||||  || ||||||||||  || |||||||||||||||||||||| ||||||||| |  ||||| |||  |||  |||||||||||||    
T  5722164 acttagagaagatactcttgctttcaaccacttacaattccaagatacacgtatgtatctcctaaagtcagtggggatgggaaagaaatttgtcacactc 5722065  T
Q  429 -agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttcaagg 524  Q
     |||  |||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||   |||| |||| ||||||  |   |||  |||||||||    
T  5722064 cagtagtcatttgattgtatcttgctatgagattgaagcaattctaaataggcattcaaggcacatattaccagacacacatatagaggttttttcaagg 5721965  T
Q  525 ttatcacgtggttgaggtt-aaggtggggtatatttgagaaagta 568  Q
    |||| |||||| | ||||| |||||||| ||||||| ||||||||    
T  5721964 ttataacgtggcttaggttaaaggtgggatatattttagaaagta 5721920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 7494720 - 7494584
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgttt 199  Q
    ||||| ||| |||||||| || | ||||||||||||||||||  ||| ||||||||||||| ||||||||  ||||||||||| ||||||||||| |||     
T  7494720 tctcaacctgtttgtcttcaagtgcaaagaaaagtactaaaagaatagccaaaaatatcatgtgatgctcattcatcacaaccacaaacttaaactgttg 7494621  T
Q  200 cttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||||||||||| |||||||||||||||||| |||||    
T  7494620 cttgtcctcaagcaacacaatagcaagaagtcagaat 7494584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 20470902 - 20471049
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||||| ||||| |||||||||| | ||  ||| |||||||||||||||| | |||||||  |||||||||||| ||||||||||||||||    
T  20470902 acaactcctctaattatcatcttatttgtcttcacatataaataaaagtactaaaaacaaagccaaaaaattcatatgatgcttcgtcatcacaacccca 20471001  T
Q  186 aacttaaaccgttt-cttgtcctcaagaaacacaatagcaagaagtta 232  Q
    ||||||||  ||||  ||||||||||| ||||| ||||||||||||||    
T  20471002 aacttaaattgtttgtttgtcctcaagcaacacgatagcaagaagtta 20471049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 21471813 - 21471674
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaactta 191  Q
    |||||| | ||||| |||||||||| |||| ||| ||||| ||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||    
T  21471813 ctctaaatatcatcttatttgtcttcaaatgcaaggaaaaagtactaaaaacataaccaaaa-tggcatatgatgctctgtcatcacaaccccaaactta 21471715  T
Q  192 aaccgtttcttgtcctcaagaaacacaatagcaagaagtta 232  Q
    ||| |||  ||||||||||| || |||||||| ||||||||    
T  21471714 aactgttgattgtcctcaagcaatacaatagctagaagtta 21471674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 29544542 - 29544451
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| || |||||||||| ||||||||||||||||||||||| ||||||    
T  29544542 acaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaattaataaaaacatagccaaaaatatcatatgatgctccttcatca 29544451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 9761537 - 9761646
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagca 224  Q
    ||||||||||||||||||| || |||||| | ||||||||||||| ||||||||||||||||| |||||  ||| ||||||||||||  | |||||||||    
T  9761537 aaagaaaagtactaaaaacgtagccaaaa-tgtcatatgatgctctgtcatcacaaccccaaa-ttaaattgttgcttgtcctcaagctagacaatagca 9761634  T
Q  225 agaagttagaat 236  Q
     |||||||||||    
T  9761635 tgaagttagaat 9761646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 3269123 - 3269220
Alignment:
Q  135 actaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagtta 232  Q
    |||||||||||| || ||| |||||||||| |||| |||||||||||| |||||||||||||||| ||||||||  | |||| |||| ||||||||||    
T  3269123 actaaaaacatagcctaaagtatcatatgaagctcggtcatcacaacctcaaacttaaaccgtttattgtcctctcgcaacaaaataacaagaagtta 3269220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 364 - 487
Target Start/End: Complemental strand, 7955920 - 7955796
Alignment:
Q  364 aattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattg 462  Q
    ||||||||||||||||| |||||||||||||  | |  |||||  |||||||||||| | ||||| ||||||||||||||||||||||  ||||||| |     
T  7955920 aattccaagatacacgtgtgtacctcctaaattcaacagggcttctcaaggcatttgccccactccagtcatcatgtgattgtaccttgttatgagacta 7955821  T
Q  463 aagcaattctaaatagacattcaag 487  Q
    ||||||||| ||| ||||| |||||    
T  7955820 aagcaattccaaacagacactcaag 7955796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 2632523 - 2632619
Alignment:
Q  81 catcaacaactactctaattctcatcctatttgtctttaaattcaaag-aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||| |||||| |||||| ||||| |||||||||| ||||| |||||||||| |||||||| ||||||||||||| ||| ||| |||||||    
T  2632523 catcaacaactcctctaactctcatactattagtctttaaatgcaaagaaaaagtactataaacataa-caaaaatatcatacgatactctgtcatca 2632619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 7142099 - 7142030
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||||||| ||||||||| || |||||||||| |||||||| ||||||||||||| |||||||    
T  7142099 tatttgtctttaaatgcaaagaaaactattaaaaacatagccaaaaatgtcatatgatgctctgtcatca 7142030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 9801996 - 9802057
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaa 187  Q
    ||||||||||||||||||| || |||||| | ||||||||||||| |||||||||||||||||    
T  9801996 aaagaaaagtactaaaaacgtagccaaaa-tgtcatatgatgctctgtcatcacaaccccaaa 9802057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 21544749 - 21544679
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||| |||||| ||| || |||||||||||||||||||||||||  || |||||| |||||||||||||||    
T  21544749 tgtggagaacggtaaacttactactttattacttgttacgatttggtgcacttgccaatttcgtccatcaa 21544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 2353357 - 2353421
Alignment:
Q  111 ttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcat 175  Q
    ||||||| |||| |||||||||  |||||||||||| || ||||||||||| |||||||||||||    
T  2353357 ttgtcttcaaatgcaaagaaaacaactaaaaacatagcctaaaatatcatacgatgctccgtcat 2353421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 20446262 - 20446171
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaag-aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||||||||||| || ||||||| |||| ||||| ||||||| ||||||||| | | ||||||||||||| ||||| |||||||    
T  20446262 acaactcctctaattctcatcttaattgtcttcaaatgcaaagaaaaagtattaaaaacat-agctaaaatatcatatgttgctctgtcatca 20446171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 23124924 - 23124833
Alignment:
Q  85 aacaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||| ||||||| |||||||||| ||||  ||||||| ||||||||||||||   |||||| ||| |||||||||| ||||||    
T  23124924 aacaactcctctaaatctcatcttatttgtcttcaaatgtaaagaaa-gtactaaaaacatagtaaaaaatgtcagatgatgctccatcatca 23124833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 7494484 - 7494555
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||| |||| ||||| || |||| ||||||||||||||||||||  || |||||| ||||||||||||||    
T  7494484 cctgtggagaatgataaacttactaatttattacttgttacgatttggtgcacttgccaatttcgtccatca 7494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 16536689 - 16536811
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctc 208  Q
    ||||||||| |||| |||||||||  || |||| ||||||  ||||||||| |||||| ||| |||||||||||  |||||||||  |||  ||||||||    
T  16536689 atttgtcttcaaatgcaaagaaaataaccaaaa-cataacttaaaatatcagatgatgttccatcatcacaaccttaaacttaaattgttgtttgtcctc 16536787  T
Q  209 aagaaacacaatagcaagaagtta 232  Q
    ||| |||| ||||  |||||||||    
T  16536788 aagcaacaaaataaaaagaagtta 16536811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 16577387 - 16577513
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctc 208  Q
    ||||||||| |||| ||||||||| ||   |||||||| |  |||||||||||||||| ||| |||||||||||  |||||||||  |||  ||||||||    
T  16577387 atttgtcttcaaatgcaaagaaaa-tagccaaaacataccttaaaatatcatatgatgttccatcatcacaaccttaaacttaaattgttgtttgtcctc 16577485  T
Q  209 aagaaacacaatagcaagaagttagaat 236  Q
    ||| || | ||||  |||||||||||||    
T  16577486 aagcaaaaaaataaaaagaagttagaat 16577513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 16588275 - 16588149
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctc 208  Q
    ||||||||| |||| ||||||||| ||   |||||||| |  |||||||||||||||| ||| |||||||||||  |||||||||  |||  ||||||||    
T  16588275 atttgtcttcaaatgcaaagaaaa-tagccaaaacataccttaaaatatcatatgatgttccatcatcacaaccttaaacttaaattgttgtttgtcctc 16588177  T
Q  209 aagaaacacaatagcaagaagttagaat 236  Q
    ||| || | ||||  |||||||||||||    
T  16588176 aagcaaaaaaataaaaagaagttagaat 16588149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 16628973 - 16628851
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctc 208  Q
    ||||||||| |||| |||||||||  || |||| ||||||  ||||||||| |||||| ||| |||||||||||  |||||||||  |||  ||||||||    
T  16628973 atttgtcttcaaatgcaaagaaaataaccaaaa-cataacttaaaatatcagatgatgttccatcatcacaaccttaaacttaaattgttgtttgtcctc 16628875  T
Q  209 aagaaacacaatagcaagaagtta 232  Q
    ||| |||| ||||  |||||||||    
T  16628874 aagcaacaaaataaaaagaagtta 16628851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 1074422 - 1074341
Alignment:
Q  154 atatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||| ||||| | |||||||||||| ||||||||| |||| ||||||| |||  |||| |||||||||||| ||||||    
T  1074422 atatcatat-atgctacatcatcacaaccctaaacttaaatcgttgcttgtccccaaacaacaaaatagcaagaaggtagaat 1074341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 4941643 - 4941609
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  4941643 ctgtcataccccaaattttgaccacttttctctat 4941609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 10439936 - 10439970
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  10439936 ctgtcataccccaaattttgaccacttttctctat 10439970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 331 - 483
Target Start/End: Complemental strand, 1074229 - 1074076
Alignment:
Q  331 ttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-a 429  Q
    |||||||| ||||  |||||||||| ||  |  |||| |||||  ||| |||||||||||||||| | ||| |   |||| ||||||||  ||||||| |    
T  1074229 ttagagaatatactcttactttcaatcacttccaattacaagacgcacatatgtacctcctaaagtcaatgtgaaaggtctaggcattttccacactcca 1074130  T
Q  430 gtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacatt 483  Q
    | | |||||||||||||||||  ||||||||||||||||||  ||| |||||||    
T  1074129 gacgtcatgtgattgtaccttgttatgagattgaagcaatttcaaacagacatt 1074076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 7956119 - 7956058
Alignment:
Q  175 tcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||||||||||||| ||||||||||||| ||| |||| |||| ||||| | ||||||    
T  7956119 tcacaaccccaaacttaaatcgtttcttgtcctgaagcaacaaaatatcaagacggtagaat 7956058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 12978455 - 12978488
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  12978455 tgtcataccccaaattttgaccacttttctctat 12978488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 18304457 - 18304424
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  18304457 tgtcataccccaaattttgaccacttttctctat 18304424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 18496555 - 18496498
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||| ||||||||| ||||||||||||| || ||||||||||||| |||||| |||||    
T  18496555 aaatgcaaagaaaactactaaaaacatagcctaaaatatcatatggtgctccatcatc 18496498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 21545929 - 21545984
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatg---atgctccgtcatca 177  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  21545929 aaagaaaagtactaaaaacatagtcaaaaatatcatatgatcatgctccgtcatca 21545984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 7143571 - 7143639
Alignment:
Q  18 tgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    ||||||||||||| ||  ||||||||||||||||||||||||  || |||||  |||||| ||||||||    
T  7143571 tgaagaacgataaacttgctactttattacttgttacgatttggtgcacttgtcaatttcatccatcaa 7143639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 7776422 - 7776350
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||| |||||||||| || |||||||| |||||||||| |||||  || |||||||||||| || ||||||    
T  7776422 cctgtggagaacgataaacttactactttgttacttgttaagatttggtgcacttgctaattttgttcatcaa 7776350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 13287716 - 13287676
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  13287716 gtcatcacaaccccaaacttagactgtttcttgtcctcaag 13287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 26137034 - 26137074
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  26137034 gtcatcacaaccccaaacttgaaccgttccttgtcctcaag 26137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 9071392 - 9071451
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtc 80  Q
    ||||||| || || |||||||| |||||||||||||||| ||| | ||||||||||||||    
T  9071392 agaacgaaaaacttactacttttttacttgttacgatttgatgcagttgctaatttcgtc 9071451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 18494626 - 18494555
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||| ||||| |||| || ||||| |||||||||||||||||||  || |||||| ||||||||| ||||    
T  18494626 cctgtggagaacaataaacttactaccttattacttgttacgatttggtgcacttgccaatttcgtctatca 18494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 21473039 - 21473094
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatcaacaac 90  Q
    |||||||||| |||||||| |||||  || ||||| ||||||||||||||||||||    
T  21473039 actactttataacttgttatgatttggtgcacttgataatttcgtccatcaacaac 21473094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 7815332 - 7815267
Alignment:
Q  100 tctcatcctatttgtctttaaattcaa-agaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    ||||||| ||||| |||| |||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  7815332 tctcatcttatttatcttcaaatgcaacaaaaaagtactaaaaacataacc-aaaatatcatatgat 7815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 13839530 - 13839564
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| ||||||    
T  13839530 ctgtcataccccaaattttgaccactttcctctat 13839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 22532784 - 22532830
Alignment:
Q  135 actaaaaacataaccaaaaatatcatatgatgctccgtcatcacaac 181  Q
    |||||||||||| || |||||||||||||||||||| |||| |||||    
T  22532784 actaaaaacatagcctaaaatatcatatgatgctccatcattacaac 22532830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 7152116 - 7152157
Alignment:
Q  18 tgaagaacgataatctgactactttattacttgttacgattt 59  Q
    |||| |||||||| || |||||||||||||||||||||||||    
T  7152116 tgaaaaacgataaacttactactttattacttgttacgattt 7152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 14074486 - 14074547
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||| || |||||||||||||||||||||||||  || |||| | | ||||||||||||    
T  14074486 acgataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatca 14074547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 14384514 - 14384575
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||| || |||||||||||||||||||||||||  || |||| | | ||||||||||||    
T  14384514 acgataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatca 14384575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 30244775 - 30244808
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||| ||||||||||||||||||||||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctat 30244808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 2506826 - 2506786
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  2506826 gtcatcacaaccccaaacttaaatagttgcttgtcctcaag 2506786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 4596918 - 4596958
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  4596918 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 4596958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 15170770 - 15170730
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||| ||||| ||| ||||||||||||    
T  15170770 gtcatcacaaccccaaacataaactgttgcttgtcctcaag 15170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 488
Target Start/End: Complemental strand, 16166754 - 16166702
Alignment:
Q  436 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaagg 488  Q
    ||||||||||||| || ||| | |||||| |||||||||| ||||||||||||    
T  16166754 atgtgattgtaccatattataaaattgaaacaattctaaacagacattcaagg 16166702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 19154909 - 19154949
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||| | ||| ||||||||||||    
T  19154909 gtcatcacaaccccaaacttaatctgttgcttgtcctcaag 19154949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 20754308 - 20754348
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||| | ||| ||||||||||||    
T  20754308 gtcatcacaaccccaaacttaatctgttgcttgtcctcaag 20754348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 39270279 - 39270239
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  39270279 gtcatcacaaccccaaacttaaattgttgcttgtcctcaag 39270239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 6e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 256 - 568
Target Start/End: Original strand, 16052557 - 16052873
Alignment:
Q  256 agattttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaa 355  Q
    |||||| |||||||||| ||||| ||||| ||||| || ||||||  |||||| ||| ||||||| |||||| ||||| |||  |||   ||||||||||    
T  16052557 agatttggctcagattgccactcttcccatcatcaaacttaactagcttaccacttctatgcaagctgaacagacttaaagagtatattcttactttcaa 16052656  T
Q  356 ccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacac-tcagtcatcatgtgattgtaccttacta 454  Q
    ||| ||| ||||||||||||| |||||||||||||||||||   ||||| ||||||||||||||| ||||| ||| || ||||||||||||||||| |||    
T  16052657 ccacatacaattccaagatacgcgtatgtacctcctaaagctagtggggttggtcaaggcatttgccacacttcaatcgtcatgtgattgtaccttgcta 16052756  T
Q  455 tgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttcaaggttatcacgtggttgaggttaaggtggg 551  Q
    ||||||||||||||||| ||| |||||||||||   ||||||| || |||||   |   |||| ||||||||||||| |||||  ||||| ||||||| |    
T  16052757 tgagattgaagcaattcgaaacagacattcaagaaatatatcatcacacacataaatagaggccttttcaaggttataacgtgactgaggataaggtgag 16052856  T
Q  552 gtatatttgagaaagta 568  Q
     |||| || ||||||||    
T  16052857 atatagtttagaaagta 16052873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 323 - 507
Target Start/End: Original strand, 28901685 - 28901869
Alignment:
Q  323 gaacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtc 422  Q
    |||||| ||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||| |||||||| ||  ||||| ||||||||| |||||||    
T  28901685 gaacaagcttagagaagatactcttactttcaaccacatacaattccaagatacacgtatgtatctcctaaaaccattggggttggtcaaggaatttgtc 28901784  T
Q  423 acac-tcagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac 507  Q
    || | |  ||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||| || ||||| ||||||| || ||||||    
T  28901785 actcgtttgtcgtcatgtgattgtatcttgctacgagattgaagc-attctaaatagacttttaaggtatatatcatcacacacac 28901869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 24120254 - 24120107
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| ||||||| ||||| |||| |||| ||||||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||     
T  24120254 acaactcctctaactctcatcttatttctcttcaaatgcaaagaaaagtactaaaaacatagcaaaaaatatcatatgatgattcgtcatcacaaccccc 24120155  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttag 233  Q
    ||  ||||  ||| |||||||||||  ||||||||||||| |||||||    
T  24120154 aaaataaaatgttgcttgtcctcaatcaacacaatagcaataagttag 24120107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 16052369 - 16052519
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| ||||||  |||||||| | |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  16052369 acaactcctctaactctcattttatttgtcctcaaatgcaaataaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcatcacaacccta 16052468  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||||||||  |   |||||||   | | ||||||||||||||||||||||    
T  16052469 aacttaaactctcgtttgtccttttgcagcacaatagcaagaagttagaat 16052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 22894648 - 22894768
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcct 207  Q
    |||||| ||| |||| | ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||| | ||||||||||| ||  ||||||||    
T  22894648 tatttggcttcaaatgcgaagaaaagtactaaaaacatacctaaaaatgtcatatgatgctctgtcatcacaatctcaaacttaaactgtcccttgtcct 22894747  T
Q  208 caagaaacacaatagcaagaa 228  Q
    |||||||||||||||||||||    
T  22894748 caagaaacacaatagcaagaa 22894768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 349 - 497
Target Start/End: Original strand, 22894905 - 22895054
Alignment:
Q  349 ctttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacact-cagtcatcatgtgattgtac 447  Q
    |||||||||| ||| |||||||||| ||||||||||| ||||||||||   || |||| ||||||||||||| |||||| ||||  || | |||||||||    
T  22894905 ctttcaaccacatacaattccaagacacacgtatgtatctcctaaagctagtgaggctagtcaaggcatttgccacactccagttgtcgtatgattgtac 22895004  T
Q  448 cttactatgagattgaagcaattctaaatagacattcaaggtctatatca 497  Q
    ||| ||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  22895005 ctttctatgagattgaagccattctaaacagacattcagggtatatatca 22895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 28252481 - 28252571
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccc 184  Q
    ||||| ||||||| ||||||||||||||| | || ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  28252481 tctaactctcatcttatttgtctttaaatacgaataaaagtattaaaaacataacaaaaaatatcatatgatgctccttcatcacaacccc 28252571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 28901432 - 28901582
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||  ||||| | ||||||| || |||| |||||||||||| ||||| |||| |||||||| ||||||||||||||   ||||||||   |    
T  28901432 acaactcctctatctctcaacttatttgtattcaaatgcaaagaaaagtattaaaagcatagccaaaaatttcatatgatgctccaatatcacaactaga 28901531  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||||||| |||| ||||| |||||| |||||| |||||||||||||||||    
T  28901532 aacttaaatcgttgcttgttctcaagcaacacagtagcaagaagttagaat 28901582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 10867011 - 10866861
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    ||||||||||||| |  | || |||||| |||  |||||||||||||  ||||||| |||| | ||||||||||||||||| ||| ||||||||||||||    
T  10867011 acaactactctaaatgacctcttatttgccttcgaattcaaagaaaataactaaaatcataccaaaaaatatcatatgatgttccatcatcacaacccca 10866912  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    || ||||||| ||  |||||||||||  ||| |||||||| ||| ||||||    
T  10866911 aaattaaacctttgtttgtcctcaagctacaaaatagcaaaaagatagaat 10866861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 13082029 - 13082137
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccc 184  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||||| ||||| | |||||||||| |  ||||||||||||||    
T  13082029 acaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaaagtactaaaaacataatcaaaa-tgtcatatgatgttttgtcatcacaacccc 13082127  T
Q  185 aaacttaaac 194  Q
    ||||||||||    
T  13082128 aaacttaaac 13082137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 256 - 397
Target Start/End: Complemental strand, 24120066 - 24119925
Alignment:
Q  256 agattttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaa 355  Q
    |||||| |||||||||||||||| | |||||| |||   ||||||  |||||| |||||||||||  ||||| ||| |||||||||||  ||||||| ||    
T  24120066 agatttggctcagattgtcactctttccaccaacaggtttaactagcttaccacttccatgcaagcagaacagactaagagaagatactcttactttaaa 24119967  T
Q  356 ccagataaaattccaagatacacgtatgtacctcctaaagcc 397  Q
    | | ||| ||||||||||||||||||||||||| | ||||||    
T  24119966 cgacatataattccaagatacacgtatgtacctgccaaagcc 24119925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 490
Target Start/End: Complemental strand, 12755987 - 12755799
Alignment:
Q  303 ttaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatgg 402  Q
    |||||| |||||||||||  | |||  ||||||||||||||  |||||||||||| | || |||||||||||| || |||||| ||| ||||||   |||    
T  12755987 ttaccacttccatgcaagtgggacattcttagagaagatactcttactttcaaccggttacaattccaagatatacatatgtatctcataaagctagtgg 12755888  T
Q  403 ggctggtcaaggcatttgtcaca-ctcagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtc 490  Q
     | |||||||  |||||||||||  ||| || |||| || ||||||||| ||||  |||| ||| ||||||||| ||||||||||||||    
T  12755887 agttggtcaaaacatttgtcacatttcattcgtcatatggttgtaccttgctataggattaaaggaattctaaacagacattcaaggtc 12755799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 5570305 - 5570386
Alignment:
Q  151 aaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagtta 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||| ||||| |||||  |||||||||  |||||||||    
T  5570305 aaaatatcatatgatgctccgttatcacaaccccaaacttaaattgttgcttgtactcaaacaacacaataataagaagtta 5570386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 12956512 - 12956431
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgc 167  Q
    |||||| |||||| ||||||| ||||| |||| |||| |||||||||||||||||||||||  ||||||||||| |||||||    
T  12956512 acaactcctctaactctcatcttatttatcttcaaatgcaaagaaaagtactaaaaacatagacaaaaatatcacatgatgc 12956431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 14977199 - 14977280
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgc 167  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||||| |||||||||||   ||||||||||||||||||    
T  14977199 acaactcctctaactctcatcttatttgtcttaaaatgcaaagaaaagtgctaaaaacatagttaaaaatatcatatgatgc 14977280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 28973490 - 28973573
Alignment:
Q  149 caaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagtta 232  Q
    |||||||||||||||||| |  |||||  ||||||||||||||||| ||| ||||||   ||||||||||||| ||||||||||    
T  28973490 caaaaatatcatatgatgttttgtcattgcaaccccaaacttaaacagttgcttgtcggtaagaaacacaataacaagaagtta 28973573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 11310318 - 11310379
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    ||||| |||| |||| |||||| |||||||||||||||| | ||||||||||||||||||||    
T  11310318 tatttttcttcaaatgcaaagataagtactaaaaacatagcaaaaaatatcatatgatgctc 11310379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 16054317 - 16054225
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||||| |||||| ||| ||| |||||||||| |||| ||||||||| |||||||| ||||| |||||| | ||||||||||||| ||||||||    
T  16054317 acaactcctctaactcttatcttatttgtcttcaaatgcaaagaaaaagtactaaagacatagccaaaa-tgtcatatgatgctctgtcatcac 16054225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 29291755 - 29291670
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaa 210  Q
    ||||||||  || ||||||||| || |||||||||||||||| ||||| |||| |||| |||||||||| |||| ||| |||||||    
T  29291755 aaagaaaataacaaaaaacatagcctaaaatatcatatgatgttccgtaatcataacctcaaacttaaatcgttgcttatcctcaa 29291670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 32239310 - 32239219
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||||| | ||| ||| | |||| ||||  |||||||||| ||||||||||| |||||||||||||| ||||| || ||||||    
T  32239310 acaactcctctaattattatcttatctatcttcaaatgtaaagaaaagtgctaaaaacatagccaaaaatatcatacgatgcaccatcatca 32239219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 6358727 - 6358629
Alignment:
Q  80 ccatcaacaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||| ||||||| |||||  ||||| | ||| |||||| |||| |||| |||||||||||||||||| || ||||| ||||||  ||||| ||||||||    
T  6358727 ccattaacaactcctctatctctcaacttatatgtcttcaaatgcaaataaaagtactaaaaacatagcccaaaatgtcatatagtgctctgtcatcac 6358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 12957559 - 12957621
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    ||||||| || |||||||||||||||||||||||||  || |||||  |||||||||||||||    
T  12957559 acgataagcttactactttattacttgttacgatttagtgcacttgtcaatttcgtccatcaa 12957621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 17664706 - 17664672
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  17664706 ctgtcataccccaaattttgaccacttttctctat 17664672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 26873670 - 26873636
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  26873670 ctgtcataccccaaattttgaccacttttctctat 26873636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 5570508 - 5570565
Alignment:
Q  337 aagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaa 394  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||| || ||||||||    
T  5570508 aagatactattactttcaaccacatacaatttcaagatacacgtatatatctcctaaa 5570565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 17683861 - 17683828
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  17683861 tgtcataccccaaattttgaccacttttctctat 17683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 17973565 - 17973598
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  17973565 tgtcataccccaaattttgaccacttttctctat 17973598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 26876119 - 26876086
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  26876119 tgtcataccccaaattttgaccacttttctctat 26876086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 30938282 - 30938315
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  30938282 tgtcataccccaaattttgaccacttttctctat 30938315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 32240446 - 32240511
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||||| || |||||||||||||||||||| ||||  || |||||| ||||| |||||||||    
T  32240446 agaacgataaacttactactttattacttgttacaatttggtgcacttgccaattttgtccatcaa 32240511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 29047408 - 29047499
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| ||||||| || |||| ||||||||| ||||||| || ||| |||||  ||||||||||||||| |||||||    
T  29047408 acaactcctctaactctcatcttatttgttttcaaatgcaaagaaaaagtactaataatatagccaaat-tatcatatgatgctctgtcatca 29047499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 13305658 - 13305721
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatc 84  Q
    |||||||||| || |||||||||||||||||||| ||||   | |||||| |||||||||||||    
T  13305658 agaacgataaactaactactttattacttgttacaattttgcgcacttgccaatttcgtccatc 13305721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 13803147 - 13803096
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||| |||||||||||||||||||| ||| |||||  |||||||||||||||    
T  13803147 actattttattacttgttacgatttgatgcacttgtcaatttcgtccatcaa 13803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 395
Target Start/End: Original strand, 28292459 - 28292525
Alignment:
Q  329 acttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaag 395  Q
    ||||| |||||||||  ||| |||||||||  || ||||| ||||||||||||| ||||||||||||    
T  28292459 acttaaagaagatactcttaatttcaaccacttataattcaaagatacacgtatctacctcctaaag 28292525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 30851230 - 30851284
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcaca 179  Q
    ||||||||  |||||||||||| ||||||||||||||||| | ||| ||||||||    
T  30851230 aaagaaaataactaaaaacatagccaaaaatatcatatgacgttccatcatcaca 30851284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 39837628 - 39837594
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| ||||||    
T  39837628 ctgtcataccccaaattttgaccactttcctctat 39837594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 1407138 - 1407105
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  1407138 tgtcataccccaaattttgaccactttcctctat 1407105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 4839847 - 4839814
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||| |||||||||||    
T  4839847 tgtcataccccaaattttgaccgcttttctctat 4839814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 26829472 - 26829427
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaaca 216  Q
    ||||| ||||||||||||||| || |||||||||||||||| ||||    
T  26829472 gtcattacaaccccaaacttagactgtttcttgtcctcaagtaaca 26829427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 26853601 - 26853646
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgattt 59  Q
    |||||| |||||||| | || |||||||||||||||||||||||||    
T  26853601 cctgtggagaacgatgaacttactactttattacttgttacgattt 26853646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 39845670 - 39845637
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  39845670 tgtcataccccaaattttgaccactttcctctat 39845637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 571 - 599
Target Start/End: Original strand, 6670710 - 6670738
Alignment:
Q  571 ctgtcataccccaaattttgaccactttt 599  Q
    |||||||||||||||||||||||||||||    
T  6670710 ctgtcataccccaaattttgaccactttt 6670738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 17099990 - 17099875
Alignment:
Q  372 gatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacact-cagtcatcatgtgattgtaccttactatgagattgaagcaatt 470  Q
    |||||||||||||| |||||||||||  | ||||||||||   |||||||| |||| ||||| |||  ||| |||||||| |||| |  ||||| |||||    
T  17099990 gatacacgtatgtatctcctaaagccagtagggctggtcacaccatttgtc-cactccagtcgtcacatgaatgtaccttgctataaatttgaaacaatt 17099892  T
Q  471 ctaaatagacattcaag 487  Q
    ||||| ||||| |||||    
T  17099891 ctaaacagacaatcaag 17099875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 25180727 - 25180687
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  25180727 gtcatcacaaccccaaacttaaatagtttcttatcctcaag 25180687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 29765397 - 29765357
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  29765397 gtcatcacaaccccaaacttaaattgttgcttgtcctcaag 29765357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 30543763 - 30543711
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcata 161  Q
    ||||||||| |||| |||| |||| ||||||||||||| | ||||||||||||    
T  30543763 atttgtcttcaaatgcaaaaaaaaatactaaaaacatagctaaaaatatcata 30543711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 33878232 - 33878272
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  33878232 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 33878272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 23223434 - 23223284
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| || |||| || ||||||  |||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23223434 acaactcctctaactcccatcttaattgtctcaaaatgcaaagaaaagtacttaaaacatagccaaaaacatcatatgatgctccgtcatcacaacccca 23223335  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||  |||||||||||| ||| |||||||||| |||||||||||||    
T  23223334 aacttaaattgtttcttgtccttaagcaacacaatagaaagaagttagaat 23223284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 21451921 - 21452057
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtt 198  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||| | ||||||||||||  ||||||||||||||||||||||||  ||    
T  21451921 tctcatcttatttgtcttcaaatgcaaagaaaacgtactaaaaacatagccaaaa-tgtcatatgatgctatgtcatcacaaccccaaacttaaactatt 21452019  T
Q  199 tcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
     |||||||||||||||||||||||||||||||||||||    
T  21452020 acttgtcctcaagaaacacaatagcaagaagttagaat 21452057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 30675507 - 30675360
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaa-gaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccc 184  Q
    |||||| |||||||| ||||| |||||||||  ||||  ||| ||||||| ||||||||||| | |||||| ||||||||||||| ||||||||||| ||    
T  30675507 acaactcctctaattttcatcttatttgtctacaaatgaaaaagaaaagttctaaaaacatagcaaaaaatgtcatatgatgctctgtcatcacaacacc 30675408  T
Q  185 aaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagtta 232  Q
     ||||||||| ||| |||||||||||| || || ||||||||||||||    
T  30675407 gaacttaaacagttgcttgtcctcaagcaaaactatagcaagaagtta 30675360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 23223220 - 23223131
Alignment:
Q  409 tcaaggcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 497  Q
    |||||||||||| ||||||| | || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  23223220 tcaaggcatttgccacactccaatcgtcatgtgattgtaccttgctatgagattaaagcaattctaaatagacattcaaggtatatatca 23223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 15299012 - 15299111
Alignment:
Q  137 taaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||| | |||| ||||| ||||  || |||||||| || | |||||||||||||||||||    
T  15299012 taaaaacataacctaaaatatcatatgatgttccatcatcacaatcgcaaatttaaatcgttgattctcctcaagcaaaaaaatagcaagaagttagaat 15299111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 50047204 - 50047113
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||| || ||||| |||||||||| |||| ||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||    
T  50047204 acaactcctctacttttcatcttatttgtcttcaaatgcaaagaaaagtatcaaaaacatagccaaaaatatcatatggtattccgtcatca 50047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 12424020 - 12424097
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||    
T  12424020 tctcatcttatttgtcttcaaatgcaaagaaaaagtactaaaaacatagccaaaa-tatcatatgatgctctgtcatca 12424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 31313553 - 31313425
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaa-aaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcc 206  Q
    |||||| ||| |||| |||||||||  ||||| ||||||  || ||| ||||||||||||  || || |||||||||||||||||||| ||| |||||||    
T  31313553 tatttgccttcaaatgcaaagaaaataactaagaaacatggcctaaattatcatatgatga-ccatcgtcacaaccccaaacttaaactgttgcttgtcc 31313455  T
Q  207 tcaagaaacacaatagcaagaagttagaat 236  Q
    ||| | |||| ||||||||||| |||||||    
T  31313454 tcaggcaacaaaatagcaagaaattagaat 31313425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 26657499 - 26657420
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    |||||| |||||  ||||| | |||||||||| |||| |||||||||||| ||||||||||  |||||||||||||||||    
T  26657499 acaactcctctatctctcaacatatttgtcttcaaatgcaaagaaaagtaataaaaacatagtcaaaaatatcatatgat 26657420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 50048239 - 50048310
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||| |||||||||| || |||||||||||||||||||  |||| ||| |||||| ||||||||||||||    
T  50048239 cctgtggagaacgataaacttactactttattacttgttataatttgatgcacttgccaatttcgtccatca 50048310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 260 - 382
Target Start/End: Original strand, 21452099 - 21452221
Alignment:
Q  260 tttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccag 359  Q
    |||||||||||| ||| || |||||| |||| || | ||||  ||||||  ||||||||||  || |||| ||||||| |||||  |||||||||||||     
T  21452099 tttgctcagattttcattcctcccactatcaaacttgactaggttaccacctccatgcaagcagatcaaatttagagaggatactcttactttcaaccac 21452198  T
Q  360 ataaaattccaagatacacgtat 382  Q
    ||| ||||| |||||||||||||    
T  21452199 atacaattcaaagatacacgtat 21452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 11770093 - 11770178
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||||| ||||||| ||||| |||| |||| ||||||| |||| ||||||||||  |||||||||||| ||||||||  |||||||    
T  11770093 ctctaactctcatcttatttatcttcaaatgcaaagaatagtattaaaaacatagacaaaaatatcatgtgatgctctatcatcac 11770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 25730670 - 25730754
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataac-caaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| ||||||| || |||| |||||||||||||| |||||||| |  |||||||||||||||||||| |||||||    
T  25730670 ctctaactctcatcttatttgttttcaaatgcaaagaaaagtact-aaaacatagcaaaaaaatatcatatgatgctctgtcatca 25730754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 25777932 - 25778013
Alignment:
Q  95 ctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||| ||||||| ||||| | || |||| |||||||||| ||||| |||||| | |||||||||||||||| ||||||||||    
T  25777932 ctaactctcatcttatttattttcaaatgcaaagaaaagcactaagaacatagcaaaaaatatcatatgatactccgtcatc 25778013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 12810345 - 12810256
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||  ||||| | |||||||||||||||  ||||||||||||||||||||||   |||||||||  |||||||| ||||||||    
T  12810345 acaactcctctatctctcaacttatttgtctttaaatataaagaaaagtactaaaaacatagtaaaaaatatc--atgatgcttcgtcatca 12810256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 34935297 - 34935349
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcata 161  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||||||||    
T  34935297 atttgtctttaaattcaaagaaaataactaaaaacatagcctaaaatatcata 34935349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 25266462 - 25266504
Alignment:
Q  112 tgtctttaaattcaaagaaaagtactaaaaacataaccaaaaa 154  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  25266462 tgtcttcaaatgcaaagaaaagtactaaaaacataaccaaaaa 25266504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 30675317 - 30675235
Alignment:
Q  256 agattttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaa 338  Q
    |||||||||||||||||||| || ||||||||||| || ||||||  |||||| ||| ||||||   ||||||||||| ||||    
T  30675317 agattttgctcagattgtcattcttcccaccatcaaacttaactaacttaccacttctatgcaattggaacaaacttatagaa 30675235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 31548522 - 31548556
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  31548522 ctgtcataccccaaattttgaccacttttctctat 31548556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 34522115 - 34522185
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||| |||||||||| || |||| ||||||||||||||||||||  || |||||| |||||| ||||||||    
T  34522115 tgtggagaacgataaacttactattttattacttgttacgatttggtgcacttgccaatttcttccatcaa 34522185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 8247756 - 8247840
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaag-tactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| |||||||||| |||| |||||||||| || ||||||||||  ||||| | ||||||||||||| |||||||    
T  8247756 ctctaactctcatcttatttgtcttcaaatgcaaagaaaaggtattaaaaacatagtcaaaa-tgtcatatgatgctctgtcatca 8247840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 21498963 - 21498930
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctat 21498930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 22624882 - 22624837
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaaca 216  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  22624882 gtcatcacaaccccaaacttaaacggttgcttgtcctcaagtaaca 22624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 25965488 - 25965545
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    ||||||||||||| | |||||||||  ||||||||||||||| |||| ||||||||||    
T  25965488 tatttgtctttaagtacaaagaaaataactaaaaacataacctaaaacatcatatgat 25965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 31313097 - 31313020
Alignment:
Q  412 aggcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaagg 488  Q
    ||||||||| ||||||| | || | |||| |||||||||| |||||||||| || |||||||||||||||| ||||||    
T  31313097 aggcatttgccacactccaatcgtgatgttattgtaccttgctatgagattaaaccaattctaaatagacaatcaagg 31313020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 31539954 - 31539987
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  31539954 tgtcataccccaaattttgaccacttttctctat 31539987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 35104129 - 35104096
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  35104129 tgtcataccccaaattttgaccacttttctctat 35104096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 21914855 - 21914895
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  21914855 gtcatcacaaccccaaacttgaaccgttacttgtcctcaag 21914895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 26102047 - 26101987
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcaca 179  Q
    |||| |||||||||  |||||||||||  || |||||||||||||||||||| ||||||||    
T  26102047 aaatgcaaagaaaataactaaaaacatcgcctaaaatatcatatgatgctccatcatcaca 26101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 487
Target Start/End: Complemental strand, 27754837 - 27754786
Alignment:
Q  436 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 487  Q
    |||||||||||| ||||||||| |||||| |||||||||| ||| |||||||    
T  27754837 atgtgattgtacgttactatgatattgaaacaattctaaacagaaattcaag 27754786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 3432956 - 3432922
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| ||||||    
T  3432956 ctgtcataccccaaattttgaccactttcctctat 3432922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 14397356 - 14397286
Alignment:
Q  391 taaagccgatggggctggtcaaggcatttgtcacact-cagtcatcatgtgattgtaccttactatgagat 460  Q
    ||||||| ||| | |||||||||| ||||| |||||| | ||| ||||||||||||||||| |||||||||    
T  14397356 taaagccaatgagactggtcaaggtatttgccacactaccgtcgtcatgtgattgtaccttgctatgagat 14397286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 17836853 - 17836791
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccat 83  Q
    |||||||||| || |||||||| |||||||||| |||||  || |||||| ||||||||||||    
T  17836853 agaacgataaacttactactttcttacttgttatgatttggtgcacttgccaatttcgtccat 17836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 23224619 - 23224697
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaacaactact 94  Q
    |||| |||| ||||| || ||||| ||||||||||||||||||| | | |||||| ||||||| |||||| ||| ||||    
T  23224619 tgtggagaatgataaacttactaccttattacttgttacgatttgacgcacttgccaatttcgcccatcaccaattact 23224697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 29221554 - 29221520
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||| ||||||||||||    
T  29221554 ctgtcataccccaaattttgactacttttctctat 29221520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 30676667 - 30676729
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccat 83  Q
    ||||||||||  | |||||||||||||||||||||||||  ||||||||  || |||||||||    
T  30676667 agaacgataaatttactactttattacttgttacgatttggtgaacttgtcaagttcgtccat 30676729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 490
Target Start/End: Original strand, 31313107 - 31313161
Alignment:
Q  436 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtc 490  Q
    |||| |||||||||   ||||||||| ||||||||||||||||||| ||||||||    
T  31313107 atgttattgtacctggttatgagattaaagcaattctaaatagacaatcaaggtc 31313161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 572 - 602
Target Start/End: Complemental strand, 44320257 - 44320227
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctc 602  Q
    |||||||||||||||||||||||||||||||    
T  44320257 tgtcataccccaaattttgaccacttttctc 44320227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 20314092 - 20314059
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| |||||    
T  20314092 tgtcataccccaaattttgaccacttttttctat 20314059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 21912072 - 21912112
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||||||  |||||||||||    
T  21912072 gtcatcacaaccccaaacttgaaccgttatttgtcctcaag 21912112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 27682929 - 27682993
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||| |||| || ||||||||||||||||||||| |||  || |||||  ||||||||||||||    
T  27682929 agaacaataaacttactactttattacttgttacggtttggtgcacttgtcaatttcgtccatca 27682993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 574 - 602
Target Start/End: Original strand, 28457556 - 28457584
Alignment:
Q  574 tcataccccaaattttgaccacttttctc 602  Q
    |||||||||||||||||||||||||||||    
T  28457556 tcataccccaaattttgaccacttttctc 28457584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 93 - 236
Target Start/End: Original strand, 28278522 - 28278664
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaa 192  Q
    |||||| |||| || |||||| ||| |||| |||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||| ||||||||    
T  28278522 ctctaactctcttcttatttgccttcaaatgcaaagaaaagtactaaaa-catagcaaaaaatatcatatgatgctctgtcatcacaacccaaaacttaa 28278620  T
Q  193 accgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |  ||| |||||||||||| ||||||||||||||||||||||||    
T  28278621 agtgttgcttgtcctcaagcaacacaatagcaagaagttagaat 28278664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 21505231 - 21505323
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    ||||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  21505231 acaactactctaactctcatcttatttgtcttcaaatgcaaagaaaaatactaaaaacatagccaaaaatatcatatgatgctccgtcatcac 21505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 39730448 - 39730324
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcct 207  Q
    |||||||||| || |  ||||||||  |||||||||||| || ||||||| ||||||||||||| |||||||||||||||||||||  |||  |||||||    
T  39730448 tatttgtcttcaattataaagaaaataactaaaaacatagcctaaaatattatatgatgctccgccatcacaaccccaaacttaaaatgttatttgtcct 39730349  T
Q  208 caagaaacacaatagcaagaagtta 232  Q
    |||| |||| |||||||||||||||    
T  39730348 caagcaacaaaatagcaagaagtta 39730324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 31449955 - 31449830
Alignment:
Q  111 ttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaa 210  Q
    ||||||| |||| |||| ||||  |||||||||||| |  ||||||||||| ||| |||| ||||||||||||||||||||||| ||| |||||||||||    
T  31449955 ttgtcttcaaatgcaaataaaataactaaaaacatagcttaaaatatcataagatactccatcatcacaaccccaaacttaaactgttgcttgtcctcaa 31449856  T
Q  211 gaaacacaatagcaagaagttagaat 236  Q
    | |||| | ||||||||||| |||||    
T  31449855 gtaacaaattagcaagaagtcagaat 31449830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 32276638 - 32276752
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacaca 218  Q
    |||| |||||||||  |||||||||||| |||||| || ||||||||| ||| ||||||||||||||||||||||| |||||||||||| | | |||| |    
T  32276638 aaatgcaaagaaaataactaaaaacatatccaaaagtaccatatgatgttccttcatcacaaccccaaacttaaacggtttcttgtccttacgcaacaaa 32276737  T
Q  219 atagcaagaagttag 233  Q
    ||| |||||| ||||    
T  32276738 ataacaagaacttag 32276752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 39730217 - 39730111
Alignment:
Q  364 aattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactca-gtcatcatgtgattgtaccttactatgagattg 462  Q
    |||| ||||||||| |||||||||||||||||||  || | |||||||||| ||||| |||||||| |||||| ||||||||||| ||||||||||||||    
T  39730217 aatttcaagatacatgtatgtacctcctaaagccagtgag-ctggtcaaggtatttgccacactcaagtcatcgtgtgattgtacattactatgagattg 39730119  T
Q  463 aagcaatt 470  Q
    | ||||||    
T  39730118 atgcaatt 39730111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 364 - 489
Target Start/End: Original strand, 22389140 - 22389265
Alignment:
Q  364 aattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactcagtcatcatgtgattgtaccttactatgagattga 463  Q
    ||||||||| |||| |  ||||||||||||||    || |||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||| |||||    
T  22389140 aattccaagctacaggattgtacctcctaaaggtagtgaggctggtcaaggtatttgccacacccagtcgtcatgtgactgtaccttgctatgaaattga 22389239  T
Q  464 agcaattctaaatagacattcaaggt 489  Q
    || |||| |||| | |||||||||||    
T  22389240 agtaattataaacaaacattcaaggt 22389265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 32619643 - 32619586
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    |||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  32619643 tatttgtcttcaaatgcaaagaaaagtactaaaaatatagccaaaaatatcatatgat 32619586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 17415496 - 17415588
Alignment:
Q  303 ttaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaag 395  Q
    |||||| ||||| |||||  ||||||||||||| |||||||  ||||||||||| |     ||||||||||||||||||||||||||||||||    
T  17415496 ttaccacttccacgcaagtggaacaaacttagaaaagatactcttactttcaactattcccaattccaagatacacgtatgtacctcctaaag 17415588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 260 - 380
Target Start/End: Original strand, 28278704 - 28278823
Alignment:
Q  260 tttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccag 359  Q
    |||||||| ||||||| || |||||| ||||||  | ||||  |||||| |||||||||||   |||||| |||||||||||||  ||||||| |||||     
T  28278704 tttgctcatattgtcattc-tcccactatcagatttgactagtttaccacttccatgcaagcgaaacaaagttagagaagatactcttacttttaaccac 28278802  T
Q  360 ataaaattccaagatacacgt 380  Q
    ||| |||||||||||||||||    
T  28278803 atagaattccaagatacacgt 28278823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 31000597 - 31000669
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||| |||| ||||| || |||||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  31000597 cctgtggagaatgataaacttactactttattacttgttacaatttgatgcacttgcaaatttcgtccatcaa 31000669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 35707826 - 35707735
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||||  ||||| | ||||||||||||| |||||||    
T  35707826 acaacttctctaactctcatcttatttgtcttcaaatacaaagaaaaagtactaaaaacatagtcaaaa-tgtcatatgatgctctgtcatca 35707735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 25474060 - 25473969
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| |||||||||| ||||  ||| |||| |||||||||||||| |||||| | ||||||||||||| |||||||    
T  25474060 acaactcctctaactctcatcttatttgtcttcaaatgaaaataaaatgtactaaaaacatagccaaaa-tgtcatatgatgctctgtcatca 25473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 18236418 - 18236485
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||| ||| |||| |||||||||  |||||||||||| |  |||||||||||||||||||||||||||    
T  18236418 tttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgctccgtcatca 18236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 1733123 - 1733042
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    |||||| |||||| |||||||  ||||||||| ||||  ||| ||||||||||||||||||| | ||||| ||||||||||||    
T  1733123 acaactcctctaactctcatctcatttgtcttcaaatgaaaaaaaaagtactaaaaacataa-ctaaaatgtcatatgatgct 1733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 15944623 - 15944589
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  15944623 ctgtcataccccaaattttgaccacttttctctat 15944589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 20621517 - 20621551
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  20621517 ctgtcataccccaaattttgaccacttttctctat 20621551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 29769660 - 29769610
Alignment:
Q  138 aaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaac 188  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||||||    
T  29769660 aaaaacatagcctaaaatattatatgatgctccgtcatcataaccccaaac 29769610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 35138592 - 35138626
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  35138592 ctgtcataccccaaattttgaccacttttctctat 35138626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 35146928 - 35146962
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  35146928 ctgtcataccccaaattttgaccacttttctctat 35146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 41233910 - 41233876
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  41233910 ctgtcataccccaaattttgaccacttttctctat 41233876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 14582925 - 14582958
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  14582925 tgtcataccccaaattttgaccacttttctctat 14582958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 15953137 - 15953104
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  15953137 tgtcataccccaaattttgaccacttttctctat 15953104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 17687463 - 17687430
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  17687463 tgtcataccccaaattttgaccacttttctctat 17687430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 20372378 - 20372345
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  20372378 tgtcataccccaaattttgaccacttttctctat 20372345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 25483601 - 25483634
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  25483601 tgtcataccccaaattttgaccacttttctctat 25483634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 25491207 - 25491240
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  25491207 tgtcataccccaaattttgaccacttttctctat 25491240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 27918127 - 27918224
Alignment:
Q  139 aaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||||||| | |||||||||||||| |  ||| |||||||| |||||||||||||  ||| |||||| ||||  || ||| ||| |||||||||||||    
T  27918127 aaaacatagctaaaaatatcatatgttattccatcatcacatccccaaacttaaattgttgcttgtcatcaaacaaaacattagtaagaagttagaat 27918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 42249520 - 42249487
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  42249520 tgtcataccccaaattttgaccacttttctctat 42249487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 22388934 - 22388997
Alignment:
Q  172 tcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||| ||||||||||||||| | |||| |||||| |||||||| | |||||||||||||||||||    
T  22388934 tcattacaaccccaaacttatatcgttgcttgtcatcaagaaa-aaaatagcaagaagttagaat 22388997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 601
Target Start/End: Original strand, 24292371 - 24292401
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttct 601  Q
    |||||||||||||||||||||||||||||||    
T  24292371 ctgtcataccccaaattttgaccacttttct 24292401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 42565995 - 42565961
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| ||||||    
T  42565995 ctgtcataccccaaattttgaccactttcctctat 42565961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 601
Target Start/End: Original strand, 24285696 - 24285725
Alignment:
Q  572 tgtcataccccaaattttgaccacttttct 601  Q
    ||||||||||||||||||||||||||||||    
T  24285696 tgtcataccccaaattttgaccacttttct 24285725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 34070669 - 34070636
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||| |||||||||||||    
T  34070669 tgtcataccccaaattttgatcacttttctctat 34070636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 38168422 - 38168389
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||| |||||||||||||||||||||||||    
T  38168422 tgtcatactccaaattttgaccacttttctctat 38168389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 42574618 - 42574585
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  42574618 tgtcataccccaaattttgaccactttcctctat 42574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 44372705 - 44372738
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| |||||    
T  44372705 tgtcataccccaaattttgaccacttttttctat 44372738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 44388616 - 44388649
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| |||||    
T  44388616 tgtcataccccaaattttgaccacttttttctat 44388649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 1504312 - 1504352
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  1504312 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 1504352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 20379377 - 20379417
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    ||||||||||||||||||||| || ||| ||||||||||||    
T  20379377 gtcatcacaaccccaaacttagactgttgcttgtcctcaag 20379417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 25873209 - 25873169
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  25873209 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 25873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 25886197 - 25886157
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  25886197 gtcatcacaaccccaaacttaaattgttgcttgtcctcaag 25886157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 28455196 - 28455128
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatc 84  Q
    |||| ||||| |||| || ||||||||| ||||||||| |||||  || |||||| |||||||||||||    
T  28455196 tgtggagaaccataaacttactactttaatacttgttatgatttggtgtacttgccaatttcgtccatc 28455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 31914047 - 31914099
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcat 160  Q
    |||||||||| |||| ||||||||| ||||||||||||| | |||||| ||||    
T  31914047 tatttgtcttcaaatgcaaagaaaaatactaaaaacatagcaaaaaatgtcat 31914099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 45456306 - 45456266
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  45456306 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 45456266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 1676403 - 1676537
Alignment:
Q  102 tcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttct 201  Q
    ||||| |||||||||| ||||  |||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |     
T  1676403 tcatcttatttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcatcacaaccccaaacttaaactgttgca 1676502  T
Q  202 tgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||| ||||| |||||| |||||||||||||||||    
T  1676503 tgtcttcaagcaacacagtagcaagaagttagaat 1676537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 1682931 - 1683065
Alignment:
Q  102 tcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttct 201  Q
    ||||| |||||||||| ||||  |||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |     
T  1682931 tcatcttatttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcatcacaaccccaaacttaaactgttgca 1683030  T
Q  202 tgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||| ||||| |||||| |||||||||||||||||    
T  1683031 tgtcttcaagcaacacagtagcaagaagttagaat 1683065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 304 - 428
Target Start/End: Original strand, 1696893 - 1697017
Alignment:
Q  304 taccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggg 403  Q
    ||||| |||||||||||  ||||||||||||||| |||||  ||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||  ||||    
T  1696893 taccacttccatgcaagcagaacaaacttagagaggatacttttactttcaaccacatacaattccaagatacacatatgtaccttctaaagccagtggg 1696992  T
Q  404 gctggtcaaggcatttgtcacactc 428  Q
    ||||||||||||||||| |||||||    
T  1696993 gctggtcaaggcatttgccacactc 1697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 1696675 - 1696809
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgttt 199  Q
    ||||||| |||||||||| ||||  ||| |||||||||||| |  || |||||||| ||||||||||||   ||||||||||| ||||||||||| |||     
T  1696675 tctcatcttatttgtcttcaaatgtaaataaaagtactaaata--tagccaaaaatgtcatatgatgctttatcatcacaacctcaaacttaaactgttg 1696772  T
Q  200 cttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||| || ||||| |||||| |||||||||||||||||    
T  1696773 cttatcttcaagcaacacagtagcaagaagttagaat 1696809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 15192212 - 15192137
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcat 175  Q
    ||||||| |||||||||| |||| ||||||||||||| ||||||||||| |||||| ||||||||||||| |||||    
T  15192212 tctcatcttatttgtcttcaaatgcaaagaaaagtacgaaaaacataacaaaaaatgtcatatgatgctctgtcat 15192137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 34850839 - 34850752
Alignment:
Q  149 caaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||| |||||||| || |||||| |||| ||||| |||||| ||| ||||| | |||||||||||||| ||||||||||||||    
T  34850839 caaaaatattatatgatgttctgtcatcgcaactccaaatttaaactgttgcttgttcgcaagaaacacaataacaagaagttagaat 34850752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 34864383 - 34864458
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcata 161  Q
    |||||| |||||| | | ||| |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  34864383 acaactcctctaacttttatcttatttgtcttcaaatacaaagaaaagtactaaaaacataacaaaaaatatcata 34864458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 12111446 - 12111510
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtca 174  Q
    |||||||| |||| |||| |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  12111446 tttgtcttcaaatgcaaataaaagtactaaaaacataacaaaaaatgtcatatgatgctctgtca 12111510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 18897992 - 18897921
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcaca 179  Q
    |||||||||| |||| |||||||||||| |||||||| | |||||||| |||||||||| |||| |||||||    
T  18897992 tatttgtcttcaaatgcaaagaaaagtagtaaaaacacagccaaaaatgtcatatgatgatccgccatcaca 18897921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 5906819 - 5906905
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaa-atatcatatgatgctccgtcatcac 178  Q
    |||||| ||||||| | |||||||| |||| |||| |||||||||||||||||| | |||| ||||||||||||| | |||||||||    
T  5906819 ctctaactctcatcttgtttgtcttcaaatgcaaataaaagtactaaaaacatagcaaaaatatatcatatgatgtttcgtcatcac 5906905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 10576437 - 10576371
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaactta 191  Q
    ||||||||  ||||||||||||  | ||||||||||||||| |||| ||||||||||||||||||||    
T  10576437 aaagaaaataactaaaaacatagtctaaaatatcatatgatactccatcatcacaaccccaaactta 10576371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 434 - 500
Target Start/End: Original strand, 15787861 - 15787927
Alignment:
Q  434 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcacca 500  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||    
T  15787861 tcatttgattgtaccttgctatgagattgaatcaattttaaatagacatttaaagtctatattacca 15787927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 47023622 - 47023552
Alignment:
Q  15 ctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||||||| ||||| || ||||| ||||||||||||||||||| ||| |||||| |||||||| |||||    
T  47023622 ctgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgttcatca 47023552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 20717941 - 20718004
Alignment:
Q  23 aacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||| || |||||||||||||||||||||||||  || |||||| ||||||||| |||||    
T  20717941 aacgataaacttactactttattacttgttacgatttggtgcacttgccaatttcgtctatcaa 20718004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 605
Target Start/End: Original strand, 52295602 - 52295637
Alignment:
Q  570 gctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||||    
T  52295602 gctgtcataccccaaattttgaccacttttctctat 52295637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 8094348 - 8094314
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  8094348 ctgtcataccccaaattttgaccacttttctctat 8094314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 9288204 - 9288142
Alignment:
Q  115 ctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||| || ||||||||| ||||||||||||| || ||||||||||||| |||||| ||||||    
T  9288204 ctttatatgcaaagaaaactactaaaaacatatcctaaaatatcatatggtgctccttcatca 9288142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 12996475 - 12996509
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  12996475 ctgtcataccccaaattttgaccacttttctctat 12996509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 8103153 - 8103120
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  8103153 tgtcataccccaaattttgaccacttttctctat 8103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 10638328 - 10638361
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  10638328 tgtcataccccaaattttgaccacttttctctat 10638361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 12428543 - 12428510
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  12428543 tgtcataccccaaattttgaccacttttctctat 12428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 21532369 - 21532336
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  21532369 tgtcataccccaaattttgaccacttttctctat 21532336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 27343756 - 27343723
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  27343756 tgtcataccccaaattttgaccacttttctctat 27343723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 12840761 - 12840697
Alignment:
Q  22 gaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    ||||||||| || ||||||||| ||||||||||||||   || |||||| |||||||||||||||    
T  12840761 gaacgataaacttactactttaatacttgttacgattcagtgcacttgccaatttcgtccatcaa 12840697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 22219945 - 22220009
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||||||| || ||||||||||||||||||| |||||  || |||||  ||||||||||||||    
T  22219945 agaacgataaacttactactttattacttgttatgatttagtgcacttgtcaatttcgtccatca 22220009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 25315323 - 25315414
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtact-aaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||  ||||||| ||||| |||| ||||  ||||||||||||| |||||||||| | ||||| ||||||||||||| |||||||    
T  25315323 acaactcctctatctctcatcttatttatcttcaaatgtaaagaaaagtactaaaaaacataa-ctaaaatgtcatatgatgctcggtcatca 25315414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 24580004 - 24580047
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgattt 59  Q
    |||| |||||||||| || |||||||||||||||||||||||||    
T  24580004 tgtggagaacgataaactaactactttattacttgttacgattt 24580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 25050164 - 25050227
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaata 156  Q
    |||||| | ||||| |||||||||| |||| |||| |||| ||||||||||||| |||||||||    
T  25050164 ctctaactttcatcttatttgtcttcaaatacaaataaaaatactaaaaacatagccaaaaata 25050227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 30797703 - 30797754
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatt 75  Q
    ||||||| || ||||||||||||||||||||||||| ||| |||||| ||||    
T  30797703 acgataaacttactactttattacttgttacgatttgatgcacttgccaatt 30797754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 4523745 - 4523712
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  4523745 tgtcataccccaaattttgaccactttcctctat 4523712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 10320350 - 10320394
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    |||||||| ||||||||||||| | |||||| |||||||||||||    
T  10320350 aaagaaaattactaaaaacatagcgaaaaatgtcatatgatgctc 10320394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 17339927 - 17339995
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||||| ||||||||  ||| ||||  | |||||||||| || |||||||||||||||||||| |||||    
T  17339927 tatttgcctttaaatgtaaataaaataattaaaaacatagcctaaaatatcatatgatgctccatcatc 17339995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 19826707 - 19826667
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  19826707 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 19826667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 260 - 568
Target Start/End: Complemental strand, 11520971 - 11520659
Alignment:
Q  260 tttgctcagattgtcactcatcccaccatcagacgtaactatattaccatttccatgcaagatgaacaaacttagagaagatacaattactttcaaccag 359  Q
    |||||||||||||||| || |||||| |||| || | ||||  ||||||  ||||| |||   |  |||||||||||  |||||  |||||||||||||     
T  11520971 tttgctcagattgtcattcctcccactatcaaacttgactagcttaccacatccatacaaccagttcaaacttagagtggatactcttactttcaaccac 11520872  T
Q  360 ataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-agtcatcatgtgattgtaccttactatgag 458  Q
    | | ||||| |||||||||||||||| || ||||| |   |||| |||||||||||||||| ||||||| |||| |||| |||||||||||| |||||||    
T  11520871 aaacaattcaaagatacacgtatgtatcttctaaatctagtgggactggtcaaggcatttgccacactctagtcgtcatatgattgtaccttgctatgag 11520772  T
Q  459 attgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttcaaggttatcacgtggttgaggttaaggtggggtat 555  Q
    |||||||||||| |||  ||||||||||||| |||||||  | |||||   |   |||  ||||||||||||| |||||| |||||| |||||||| |||    
T  11520771 attgaagcaattataagcagacattcaaggtatatatcataacacacagacatagaggacttttcaaggttataacgtggatgaggtaaaggtgggatat 11520672  T
Q  556 atttgagaaagta 568  Q
    ||||  |||||||    
T  11520671 atttaggaaagta 11520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 21017899 - 21017750
Alignment:
Q  87 caactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaa-tatcatatgatgctccgtcatcacaacccca 185  Q
    ||||| |||||| ||||||| ||||| |||| |||| ||||||||| ||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||    
T  21017899 caactcctctaactctcatcttatttttcttcaaatgcaaagaaaaatactaaaaacataacaaaaaaatatcatatgatgctctgttatcacaacctca 21017800  T
Q  186 aacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaa 235  Q
    |||||||| |||| |||||||| ||| ||||||||| |||||||||||||    
T  21017799 aacttaaatcgttgcttgtccttaagcaacacaataacaagaagttagaa 21017750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 13911263 - 13911138
Alignment:
Q  111 ttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaa 210  Q
    ||||||| |||| ||||||||| |||||||||||||   ||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||| ||    
T  13911263 ttgtcttcaaatacaaagaaaattactaaaaacatagaaaaaaatatcatttgattctccgtcatcacaaccctaaacttaaaccgttgcttgtcctaaa 13911164  T
Q  211 gaaacacaatagcaagaagttagaat 236  Q
    | ||||||||||||| ||||||||||    
T  13911163 gtaacacaatagcaataagttagaat 13911138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 25919564 - 25919647
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  25919564 tctaactctcatcttatttgtcttcaaattcaaagaaatgtactaaaaacataaccagaaatatcatatgatgctccatcatca 25919647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 8402693 - 8402792
Alignment:
Q  137 taaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||| |||| ||| ||| |||| ||||||    
T  8402693 taaaaacatagtctaaaatatcatatgatgctctgtcatcacaaccccaaacttaaatcgttgcttttcctcaagcaacaaaattgcaggaagatagaat 8402792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 17637126 - 17637035
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||| ||||| ||| ||||||||||||| | |||||||||||| || ||||||| |||||||| |||||||||||||||||||||    
T  17637126 acaactcctcttattcttatcttatttgtctttaattacaaagaaaagtaatataaacatagccaaaaatgtcatatgatgctccgtcatca 17637035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 487
Target Start/End: Original strand, 5632859 - 5633000
Alignment:
Q  347 tactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacact-cagtcatcatgtgattgt 445  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||| || | |   |  |||||| |||||||||||| ||||| | |||| ||| |    
T  5632859 tactttcaaccacttacaattccaagatacacgtatgtacctcctaaagtcggtagacataatcaaggaatttgtcacactgcagtcgtaatgtaattat 5632958  T
Q  446 accttactatgagattgaagcaattctaaatagacattcaag 487  Q
    ||||| | || ||||||||||||||||||| | |||||||||    
T  5632959 accttgcaattagattgaagcaattctaaacatacattcaag 5633000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 5632668 - 5632732
Alignment:
Q  172 tcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||| ||| |||||||||||||||    
T  5632668 tcatcacaaccccaaacttaaaccgttgcttgtccccaagcaacaaaatggcaagaagttagaat 5632732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 11521090 - 11521039
Alignment:
Q  159 atatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaa 210  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  11521090 atatgatgctctgtcatcacaacgccaaacttaaaccgttgcttgtcctcaa 11521039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 33914654 - 33914714
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacata 146  Q
    |||||| || ||| ||||||| |||||||||| |||| |||||||||||||||||||||||    
T  33914654 acaactcctataactctcatcttatttgtcttgaaatgcaaagaaaagtactaaaaacata 33914714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 12573305 - 12573231
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    ||||| ||||||| ||||||||||  ||| ||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  12573305 tctaactctcatcttatttgtcttctaatgcaaagaaaaagtactaaaaacataacc-aaaatgtcatatgatgct 12573231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 13549769 - 13549695
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    ||||| ||||||| ||||||||||  ||| ||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  13549769 tctaactctcatcttatttgtcttctaatgcaaagaaaaagtactaaaaacataacc-aaaatgtcatatgatgct 13549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 8197762 - 8197728
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  8197762 ctgtcataccccaaattttgaccacttttctctat 8197728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 14538671 - 14538637
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  14538671 ctgtcataccccaaattttgaccacttttctctat 14538637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 17919198 - 17919232
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  17919198 ctgtcataccccaaattttgaccacttttctctat 17919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 27341401 - 27341367
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  27341401 ctgtcataccccaaattttgaccacttttctctat 27341367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 30541 - 30508
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  30541 tgtcataccccaaattttgaccacttttctctat 30508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 16970241 - 16970177
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtc 173  Q
    ||||||| || |||| |||||||||| ||||||||||||  ||||||||||||||| |||||||||    
T  16970241 tatttgtgttcaaatacaaagaaaagcactaaaaacatagtcaaaaatatcatatg-tgctccgtc 16970177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 17628265 - 17628298
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  17628265 tgtcataccccaaattttgaccacttttctctat 17628298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 19219317 - 19219394
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| ||||| |||| |||  ||||||||| ||||||||||| | | |||| |||||||||||||| ||||||||    
T  19219317 tctcatcttatttatcttcaaaagcaaagaaaaatactaaaaacacagctaaaagtatcatatgatgcttcgtcatca 19219394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 28470282 - 28470249
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  28470282 tgtcataccccaaattttgaccacttttctctat 28470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 50824352 - 50824385
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  50824352 tgtcataccccaaattttgaccacttttctctat 50824385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 50851508 - 50851475
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  50851508 tgtcataccccaaattttgaccacttttctctat 50851475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10343000 - 10343064
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtc 80  Q
    |||| |||||||||| || |||| ||||||||| ||||||||||  || ||||||||||||||||    
T  10343000 tgtggagaacgataaacttactattttattactcgttacgattttgtgcacttgctaatttcgtc 10343064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 10884024 - 10883984
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  10884024 gtcatcacaaccccaaacttgaaccgttccttgtcctcaag 10883984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 18065828 - 18065761
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||||| ||||||| | ||| ||||||||| |||||||| ||| || |||| |||||||||    
T  18065828 tttgtctttaaatgcaaagaatattaccaaaaacatagccaaaaatgtcacataatgccccgtcatca 18065761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 1475374 - 1475463
Alignment:
Q  88 aactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||| |||||| ||||||| |||| | ||| |||| ||||||||| |||||||||||||| || ||||| ||||||||||||  |||||||    
T  1475374 aactcctctaactctcatcttattagacttcaaatgcaaagaaaaagtactaaaaacatagcc-aaaatgtcatatgatgctatgtcatca 1475463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 8154710 - 8154676
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||| ||||||    
T  8154710 ctgtcataccccaaattttgaccactttcctctat 8154676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 9525500 - 9525466
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||| |||||||||||||    
T  9525500 ctgtcataccccaaattttgatcacttttctctat 9525466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 17933654 - 17933688
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||| ||||||||||    
T  17933654 ctgtcataccccaaattttgaccaattttctctat 17933688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 572 - 602
Target Start/End: Original strand, 18039011 - 18039041
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctc 602  Q
    |||||||||||||||||||||||||||||||    
T  18039011 tgtcataccccaaattttgaccacttttctc 18039041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 31477705 - 31477771
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtca 174  Q
    ||||||||||||||| |||||||||  |||||||||||| || || ||||||  ||||||| |||||    
T  31477705 tatttgtctttaaatacaaagaaaataactaaaaacatatcctaatatatcaagtgatgcttcgtca 31477771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 41006555 - 41006589
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||| ||||||||||    
T  41006555 ctgtcataccccaaattttgaccatttttctctat 41006589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 41015335 - 41015369
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||| ||||||||||    
T  41015335 ctgtcataccccaaattttgaccatttttctctat 41015369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 2211239 - 2211272
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||| |||||||||||||||||||||||    
T  2211239 tgtcataccctaaattttgaccacttttctctat 2211272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 9555173 - 9555140
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||| |||||||||||||    
T  9555173 tgtcataccccaaattttgatcacttttctctat 9555140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 33913461 - 33913400
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtcca 82  Q
    ||||||||||  | |||||||||||||||||||| ||||  || |||||| |||||||||||    
T  33913461 agaacgataaatttactactttattacttgttacaatttggtgcacttgccaatttcgtcca 33913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 571 - 599
Target Start/End: Complemental strand, 6959006 - 6958978
Alignment:
Q  571 ctgtcataccccaaattttgaccactttt 599  Q
    |||||||||||||||||||||||||||||    
T  6959006 ctgtcataccccaaattttgaccactttt 6958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 8770880 - 8770928
Alignment:
Q  372 gatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttg 420  Q
    |||||||||||||| |||||||||||  | |||||||||| ||||||||    
T  8770880 gatacacgtatgtatctcctaaagccagtagggctggtcacggcatttg 8770928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 16223572 - 16223612
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  16223572 gtcatcacaaccccaaacttaaattgttgcttgtcctcaag 16223612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 18541814 - 18541774
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  18541814 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 18541774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 31283909 - 31283869
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    ||||||||||||||||||||||||  || ||||||||||||    
T  31283909 gtcatcacaaccccaaacttaaactattgcttgtcctcaag 31283869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 47053967 - 47053927
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  47053967 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 47053927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 110 - 232
Target Start/End: Original strand, 22661 - 22783
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctca 209  Q
    |||||||| |||| |||| |||||||| ||||||||| ||||||||   |||||||| ||  ||||||||||||||||||||||  ||| |||| |||||    
T  22661 tttgtcttcaaatgcaaataaaagtacaaaaaacatagccaaaaatggtatatgatggtctatcatcacaaccccaaacttaaagtgttgcttgccctca 22760  T
Q  210 agaaacacaatagcaagaagtta 232  Q
    || ||||||||||||||||||||    
T  22761 agcaacacaatagcaagaagtta 22783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 1952 - 2071
Alignment:
Q  115 ctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaa 214  Q
    |||||||| |||||||||  ||||||||||||   ||||| ||||||| ||  ||| ||||| |||||||||||||||| |||| |||||| ||||| ||    
T  1952 ctttaaatgcaaagaaaataactaaaaacatagttaaaaacatcatattatattccatcatcgcaaccccaaacttaaaacgttacttgtcatcaagcaa 2051  T
Q  215 cacaatagcaagaagttaga 234  Q
     | |||||||||||||||||    
T  2052 aaaaatagcaagaagttaga 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 470
Target Start/End: Original strand, 2186 - 2323
Alignment:
Q  334 gagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtcacactc-agtc 432  Q
    ||||||||||  |||||||||||||  || || | ||||| ||| |||||||||||||||||||  ||  | |||| | || ||||| ||||||| ||||    
T  2186 gagaagatactcttactttcaaccacgtacaaattcaagacacatgtatgtacctcctaaagccagtgcagatggttacggtatttgccacactcaagtc 2285  T
Q  433 atcatgtgattgtaccttactatgagattgaagcaatt 470  Q
     |||||||||||||| || |||||| ||||||| ||||    
T  2286 gtcatgtgattgtactttgctatgaaattgaagtaatt 2323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 6205 - 6128
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| ||||||| |||||||  |||||||||||||||||||||| ||||||||  |||||||||||  |||||||    
T  6205 tctcatcttatttgtgtttaaatggaaagaaaagtactaaaaacatagccaaaaatgccatatgatgctatgtcatca 6128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7349 - 7421
Alignment:
Q  13 acctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||| |||||||||| || |||||||||||||||||||||||||  || |||||  ||||||||||||||    
T  7349 acctgtggagaacgataaacttactactttattacttgttacgatttggtgcacttgtcaatttcgtccatca 7421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 21398 - 21336
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctcc 170  Q
    ||||| |||| |||| |||||||||  |||||||||||||  |||||||||||||||||||||    
T  21398 tatttttcttcaaatgcaaagaaaaacactaaaaacataataaaaaatatcatatgatgctcc 21336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 8816 - 8892
Alignment:
Q  101 ctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||| |||| ||||  ||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  8816 ctcatcttatttttcttaaaatgaaaataaaagtactaaaaaaataaccaaaaatatcatatgatgttccatcatca 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 13170 - 13239
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatat 162  Q
    |||||| ||||||| |||||||||| | ||  ||| |||||||||||||||||||| |||||||||||||    
T  13170 ctctaactctcatcttatttgtcttaatatgaaaataaaagtactaaaaacataactaaaaatatcatat 13239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 3237 - 3134
Alignment:
Q  324 aacaaacttagagaagatacaattactttcaaccagataaaattccaagatacacgtatgtacctcctaaagccgatggggctggtcaaggcatttgtca 423  Q
    |||||||||||| | |||||  ||||||||||||| ||| |||| |||||||||| |||||| |||||||  |   ||||  ||||||||||||||||||    
T  3237 aacaaacttagaaaggatactcttactttcaaccacatacaatttcaagatacacatatgtatctcctaagactagtgggattggtcaaggcatttgtca 3138  T
Q  424 cact 427  Q
    ||||    
T  3137 cact 3134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 3127 - 3075
Alignment:
Q  455 tgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac 507  Q
    |||||||||||||||| |||||||||||| ||||| ||||||| || ||||||    
T  3127 tgagattgaagcaattataaatagacattgaaggtatatatcatcacacacac 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 447014 - 446937
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaag-aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||||||| ||||  |||| |||||||||||||||||| | |||||||||||||||||||| |||||||    
T  447014 tctcatcttatttgtcttcaaatgtaaaggaaaagtactaaaaacatagc-aaaaatatcatatgatgctctgtcatca 446937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 121228 - 121261
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  121228 tgtcataccccaaattttgaccacttttctctat 121261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 27068 - 27128
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    ||||| |||| |||| ||||||||||||||||||||||| || |||||||||| |||||||    
T  27068 tatttatcttcaaatgcaaagaaaagtactaaaaacatagccgaaaatatcatgtgatgct 27128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 605
Target Start/End: Original strand, 192526 - 192561
Alignment:
Q  570 gctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||||    
T  192526 gctgtcataccccaaattttgaccacttttctctat 192561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 605
Target Start/End: Original strand, 23463 - 23497
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    |||||||||||||||||||||||||||||||||||    
T  23463 ctgtcataccccaaattttgaccacttttctctat 23497  T

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Target: scaffold0991 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 438 - 405
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  438 tgtcataccccaaattttgaccacttttctctat 405  T

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Target: scaffold0497 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 10993 - 11026
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  10993 tgtcataccccaaattttgaccacttttctctat 11026  T

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Target: scaffold0431 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 139 - 172
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  139 tgtcataccccaaattttgaccacttttctctat 172  T

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Target: scaffold0156 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 35421 - 35388
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  35421 tgtcataccccaaattttgaccacttttctctat 35388  T

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Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 33035 - 33068
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  33035 tgtcataccccaaattttgaccacttttctctat 33068  T

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Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 15813 - 15846
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  15813 tgtcataccccaaattttgaccacttttctctat 15846  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 7694 - 7661
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  7694 tgtcataccccaaattttgaccacttttctctat 7661  T

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Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 24041 - 24001
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  24041 gtcatcacaaccccaaacttaaaccattccttgtcctcaag 24001  T

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Target: scaffold0048; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 28279 - 28239
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  28279 gtcatcacaaccccaaacttgaaccgttccttgtcctcaag 28239  T

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Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 40898 - 40865
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||||||||||    
T  40898 tgtcataccccaaattttgaccacttttctctat 40865  T

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Target: scaffold0863 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 601
Target Start/End: Complemental strand, 438 - 408
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttct 601  Q
    |||||||||||||||||||||||||||||||    
T  438 ctgtcataccccaaattttgaccacttttct 408  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 25216 - 25278
Alignment:
Q  174 atcacaaccccaaacttaaaccgtttcttgtcctcaagaaacacaatagcaagaagttagaat 236  Q
    |||||||||||||||||||   ||| |||||||||||| |||| ||||| || ||||||||||    
T  25216 atcacaaccccaaacttaatatgttgcttgtcctcaagtaacaaaatagaaaaaagttagaat 25278  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 81852 - 81818
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||| |||||||||||||||||||||||    
T  81852 ctgtcataccctaaattttgaccacttttctctat 81818  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 65744 - 65710
Alignment:
Q  571 ctgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||| |||||||||||||||||||||||    
T  65744 ctgtcataccctaaattttgaccacttttctctat 65710  T

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Target: scaffold0222 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 601
Target Start/End: Complemental strand, 20547 - 20518
Alignment:
Q  572 tgtcataccccaaattttgaccacttttct 601  Q
    ||||||||||||||||||||||||||||||    
T  20547 tgtcataccccaaattttgaccacttttct 20518  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 149 - 116
Alignment:
Q  572 tgtcataccccaaattttgaccacttttctctat 605  Q
    ||||||||||||||||||||||||||| ||||||    
T  149 tgtcataccccaaattttgaccactttcctctat 116  T

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Target: scaffold0084 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 28585 - 28544
Alignment:
Q  170 cgtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    ||||||||||||||||||||| |||| || ||||||||||||    
T  28585 cgtcatcacaaccccaaacttgaaccattccttgtcctcaag 28544  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 571 - 599
Target Start/End: Complemental strand, 10974 - 10946
Alignment:
Q  571 ctgtcataccccaaattttgaccactttt 599  Q
    |||||||||||||||||||||||||||||    
T  10974 ctgtcataccccaaattttgaccactttt 10946  T

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Target: scaffold0321 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 3841 - 3881
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  3841 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 3881  T

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Target: scaffold0270 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 1054 - 1094
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  1054 gtcatcacaaccccaaacttgaaccattccttgtcctcaag 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 4023 - 3979
Alignment:
Q  172 tcatcacaaccccaaacttaaaccgtttcttgtcctcaagaaaca 216  Q
    ||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  4023 tcatcacaaccccaaacttgaaccctttctagtcctcaaggaaca 3979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 38382 - 38422
Alignment:
Q  171 gtcatcacaaccccaaacttaaaccgtttcttgtcctcaag 211  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  38382 gtcatcacaaccccaaacttaaattgttgcttgtcctcaag 38422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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