View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7003_low_18 (Length: 322)
Name: NF7003_low_18
Description: NF7003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7003_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 310
Target Start/End: Complemental strand, 7149315 - 7149023
Alignment:
| Q |
18 |
aatacaaaacaggggaaaacccaaaaacctctgtaactgnnnnnnnnnngttgaaaatggataagaacatttttggtgaagtagataatcttcctgaaga |
117 |
Q |
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| T |
7149315 |
aatacaaaaaagcggaaaacccaaaaacctctgtaactgttttttttttgttgaaaatggataagaacatttttggtgaagtagataatcttcctgaaga |
7149216 |
T |
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| Q |
118 |
agataagaaaagaatgactactatggttgaacagcttcaaactcgtgataggtatgtttcaatcttgttactttgtttgtttgaaataaagatcgtatat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7149215 |
agataagaaaagaatgactactatggttgaacagcttcaaactcgtgataggtatgcttcaatcttgttactttgtttgtttgaaataaagatcgtatat |
7149116 |
T |
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| Q |
218 |
agattggggatctgattaactttttgaaaaaatgtcatgtgctgaaaatggatgaggttctgttgtttctgttatctgcaatgtgtgaagaat |
310 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7149115 |
agattggggatctgattaactttttcaaaaaatgtcatgtgctgaaaatggatgaggttctgttgtttctgttatctgcaatgtgtgaagaat |
7149023 |
T |
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