View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7003_low_26 (Length: 250)
Name: NF7003_low_26
Description: NF7003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7003_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 11248265 - 11248359
Alignment:
| Q |
8 |
tagcagagacatccaatttcttaccttacttttgtatctttgactatgttttcgacatgtattatcaatcggattgctaatgaaatgctataagc |
102 |
Q |
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| T |
11248265 |
tagcaaaggcatccaactccttaccttacttttgtatctttgatgaggtttccgacatgtattatcaatcggattgctaatgaaatgctataagc |
11248359 |
T |
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Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 11248452 - 11248513
Alignment:
| Q |
189 |
tacaattaaacatattaattaacattgttaatacgtgtataaatcctaattttaggattgat |
250 |
Q |
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| T |
11248452 |
tacaattaaacatattaattaacattgttaatatgtgtataaatcctaattttatgattgat |
11248513 |
T |
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