View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7007_high_3 (Length: 321)
Name: NF7007_high_3
Description: NF7007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7007_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 307
Target Start/End: Complemental strand, 35448766 - 35448477
Alignment:
| Q |
18 |
agtacaacctgaatattcaagttttcctcacatgtctggtgctgatagaaatgccgtggagaccggctcaaatgtccgcgatgcttcagctatgccaatc |
117 |
Q |
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| T |
35448766 |
agtacaacctgaatattcaagttttcctcacatgtctggtgctgatagaaatgccgtggagaccggctcaaatgtccgcgatgcttcagctatgccaatc |
35448667 |
T |
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| Q |
118 |
tctggtgtcgagtccaactcagattctgacaatgaagcagttatggattttctaaacatttgttctagctttccggatcttgtttctctgttttctggta |
217 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
35448666 |
tctggtatcgagtccaactcagattctgacaatgaagcagttatggattttctaaacacttgttctagctttccggatcttgtttctctgttttctggta |
35448567 |
T |
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| Q |
218 |
tgtcctctctcttgtgtttctgtgggtcaatgtgcgcgtttaaataaaatgttcaaagcttattttggattaatcataaccagtactgat |
307 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
35448566 |
tgtcctctctcttgtgtttctgtgggtcaatgtgcatgtttaaataaaatgttcaaagcttagtttggattaatcataaccagtactgat |
35448477 |
T |
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