View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7007_high_7 (Length: 215)

Name: NF7007_high_7
Description: NF7007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7007_high_7
NF7007_high_7
[»] chr3 (35 HSPs)
chr3 (12-196)||(38318943-38319127)
chr3 (60-109)||(482782-482831)
chr3 (62-118)||(21574523-21574579)
chr3 (98-155)||(48397646-48397703)
chr3 (60-113)||(53952079-53952132)
chr3 (62-118)||(48048963-48049019)
chr3 (68-116)||(52619042-52619090)
chr3 (63-102)||(2128255-2128294)
chr3 (62-109)||(3044249-3044296)
chr3 (62-113)||(5391912-5391963)
chr3 (66-113)||(29427631-29427678)
chr3 (62-109)||(31010435-31010482)
chr3 (62-109)||(42745071-42745118)
chr3 (62-113)||(43116427-43116478)
chr3 (62-109)||(50004685-50004732)
chr3 (60-102)||(1360523-1360565)
chr3 (64-118)||(27290882-27290936)
chr3 (63-109)||(52412894-52412940)
chr3 (60-109)||(9279316-9279365)
chr3 (60-113)||(30750031-30750084)
chr3 (62-111)||(36101601-36101650)
chr3 (62-111)||(36139911-36139960)
chr3 (64-109)||(36200131-36200176)
chr3 (69-110)||(39723229-39723270)
chr3 (64-105)||(44374639-44374680)
chr3 (60-109)||(49465926-49465975)
chr3 (62-111)||(50952366-50952415)
chr3 (62-118)||(14548702-14548758)
chr3 (65-109)||(20267164-20267208)
chr3 (62-118)||(26330304-26330360)
chr3 (62-118)||(37273167-37273223)
chr3 (66-102)||(42545677-42545713)
chr3 (62-102)||(45432936-45432976)
chr3 (69-113)||(45541611-45541655)
chr3 (68-112)||(53762381-53762425)
[»] chr8 (40 HSPs)
chr8 (62-120)||(40728396-40728454)
chr8 (61-157)||(39049304-39049400)
chr8 (62-113)||(37444406-37444457)
chr8 (60-110)||(29169086-29169136)
chr8 (62-116)||(42215289-42215343)
chr8 (68-118)||(43368681-43368731)
chr8 (65-110)||(926511-926556)
chr8 (62-111)||(21653114-21653163)
chr8 (64-113)||(38537626-38537675)
chr8 (67-111)||(3254263-3254307)
chr8 (62-118)||(5069730-5069786)
chr8 (62-158)||(6950355-6950451)
chr8 (62-118)||(9835881-9835937)
chr8 (62-118)||(14949899-14949955)
chr8 (62-113)||(7646239-7646290)
chr8 (62-113)||(10383918-10383969)
chr8 (62-113)||(12851209-12851260)
chr8 (62-153)||(29169882-29169973)
chr8 (59-118)||(30191122-30191181)
chr8 (62-116)||(34849136-34849191)
chr8 (62-113)||(43504784-43504835)
chr8 (62-109)||(43704366-43704413)
chr8 (35-118)||(8060669-8060758)
chr8 (55-109)||(11415180-11415234)
chr8 (55-109)||(29262864-29262918)
chr8 (63-109)||(36643883-36643929)
chr8 (63-109)||(37740417-37740462)
chr8 (60-105)||(2492967-2493012)
chr8 (69-110)||(2594986-2595027)
chr8 (60-113)||(7107708-7107761)
chr8 (64-109)||(11185256-11185301)
chr8 (62-103)||(20672783-20672824)
chr8 (60-105)||(25869260-25869305)
chr8 (62-111)||(41606891-41606940)
chr8 (62-118)||(7918427-7918483)
chr8 (60-112)||(11121806-11121858)
chr8 (62-110)||(11183578-11183626)
chr8 (62-118)||(30918146-30918201)
chr8 (62-94)||(31751562-31751594)
chr8 (62-118)||(31875576-31875632)
[»] chr5 (27 HSPs)
chr5 (64-157)||(32172688-32172781)
chr5 (61-113)||(36882100-36882152)
chr5 (62-118)||(37611196-37611252)
chr5 (62-118)||(37787926-37787982)
chr5 (62-118)||(37794679-37794735)
chr5 (62-113)||(17368709-17368760)
chr5 (62-136)||(38728435-38728509)
chr5 (62-118)||(4619740-4619796)
chr5 (62-118)||(19177021-19177077)
chr5 (62-118)||(37526180-37526236)
chr5 (62-118)||(37690617-37690673)
chr5 (38-109)||(11700368-11700438)
chr5 (62-113)||(17258869-17258920)
chr5 (62-109)||(18704026-18704073)
chr5 (60-95)||(28413288-28413323)
chr5 (62-97)||(36638780-36638815)
chr5 (62-96)||(11615534-11615568)
chr5 (62-108)||(12467166-12467212)
chr5 (60-113)||(499717-499770)
chr5 (61-110)||(1899186-1899235)
chr5 (62-95)||(12521561-12521594)
chr5 (62-118)||(8089969-8090025)
chr5 (62-113)||(9106854-9106906)
chr5 (61-105)||(25461310-25461354)
chr5 (61-113)||(35445829-35445881)
chr5 (62-118)||(37588341-37588397)
chr5 (62-113)||(39105497-39105549)
[»] chr6 (28 HSPs)
chr6 (67-118)||(22743519-22743570)
chr6 (62-123)||(28641725-28641786)
chr6 (62-109)||(4420676-4420723)
chr6 (62-113)||(20368166-20368217)
chr6 (62-111)||(34403888-34403937)
chr6 (62-118)||(725636-725692)
chr6 (66-118)||(7931707-7931759)
chr6 (61-109)||(27615263-27615311)
chr6 (62-118)||(32171364-32171420)
chr6 (62-118)||(33498652-33498708)
chr6 (62-113)||(1575928-1575979)
chr6 (63-118)||(5566158-5566213)
chr6 (62-105)||(6536980-6537023)
chr6 (62-109)||(8010390-8010437)
chr6 (71-118)||(8147047-8147094)
chr6 (62-109)||(9667975-9668022)
chr6 (62-113)||(31624123-31624174)
chr6 (63-118)||(32577967-32578022)
chr6 (55-109)||(27595557-27595611)
chr6 (55-109)||(27693429-27693483)
chr6 (69-110)||(696642-696683)
chr6 (60-113)||(34633109-34633162)
chr6 (62-110)||(283128-283176)
chr6 (62-118)||(2455843-2455899)
chr6 (63-107)||(3155209-3155253)
chr6 (71-103)||(20356099-20356131)
chr6 (62-118)||(30863279-30863335)
chr6 (62-118)||(31420978-31421034)
[»] chr4 (26 HSPs)
chr4 (63-113)||(22662233-22662283)
chr4 (67-113)||(32831504-32831550)
chr4 (62-110)||(6466035-6466083)
chr4 (60-111)||(1312872-1312923)
chr4 (62-113)||(20936215-20936266)
chr4 (63-113)||(22666712-22666762)
chr4 (63-113)||(43886117-43886167)
chr4 (65-118)||(1965977-1966030)
chr4 (56-109)||(2874614-2874667)
chr4 (68-109)||(27405848-27405889)
chr4 (62-158)||(6987682-6987778)
chr4 (55-103)||(29467620-29467668)
chr4 (65-137)||(50799992-50800064)
chr4 (62-113)||(1137745-1137796)
chr4 (63-118)||(2996607-2996662)
chr4 (67-110)||(19395060-19395103)
chr4 (62-97)||(41603413-41603448)
chr4 (63-113)||(8469363-8469413)
chr4 (60-97)||(7694012-7694049)
chr4 (58-103)||(21593002-21593047)
chr4 (65-110)||(30631992-30632037)
chr4 (60-113)||(37575922-37575975)
chr4 (68-113)||(52419604-52419648)
chr4 (57-113)||(2841654-2841710)
chr4 (62-118)||(45128291-45128347)
chr4 (62-118)||(53315359-53315415)
[»] chr1 (37 HSPs)
chr1 (62-116)||(37593667-37593721)
chr1 (62-120)||(51929823-51929881)
chr1 (65-118)||(6262056-6262109)
chr1 (60-113)||(35925721-35925774)
chr1 (62-113)||(4699601-4699652)
chr1 (62-157)||(6231758-6231853)
chr1 (62-157)||(15581287-15581382)
chr1 (60-110)||(3597270-3597320)
chr1 (60-118)||(6976956-6977013)
chr1 (68-113)||(4481969-4482014)
chr1 (60-109)||(15437994-15438043)
chr1 (61-109)||(51695484-51695533)
chr1 (62-110)||(6292526-6292574)
chr1 (62-113)||(15942733-15942785)
chr1 (62-110)||(31517729-31517777)
chr1 (62-118)||(43029383-43029439)
chr1 (60-111)||(601072-601122)
chr1 (62-113)||(10280682-10280733)
chr1 (62-113)||(31118076-31118127)
chr1 (71-109)||(3070080-3070118)
chr1 (68-110)||(4202140-4202182)
chr1 (76-110)||(23445381-23445415)
chr1 (54-112)||(34405182-34405240)
chr1 (56-105)||(1509959-1510008)
chr1 (60-97)||(3244930-3244967)
chr1 (60-109)||(15579513-15579562)
chr1 (65-118)||(17628635-17628688)
chr1 (65-110)||(17778993-17779038)
chr1 (61-94)||(27820201-27820234)
chr1 (61-94)||(27820342-27820375)
chr1 (67-108)||(35080060-35080101)
chr1 (64-113)||(37811887-37811936)
chr1 (68-113)||(38578567-38578612)
chr1 (63-118)||(11941296-11941352)
chr1 (63-115)||(12477271-12477323)
chr1 (66-113)||(28287527-28287575)
chr1 (62-102)||(30257716-30257756)
[»] chr2 (28 HSPs)
chr2 (62-110)||(5133805-5133853)
chr2 (62-113)||(1647269-1647320)
chr2 (62-113)||(22681171-22681222)
chr2 (62-113)||(28039318-28039369)
chr2 (60-118)||(1742013-1742071)
chr2 (60-113)||(787363-787416)
chr2 (62-110)||(9174848-9174897)
chr2 (62-119)||(10285893-10285950)
chr2 (62-110)||(29316764-29316812)
chr2 (65-112)||(14451037-14451084)
chr2 (62-109)||(34652026-34652073)
chr2 (62-109)||(41809235-41809282)
chr2 (62-113)||(43529844-43529895)
chr2 (65-112)||(44438826-44438873)
chr2 (62-108)||(1939323-1939369)
chr2 (62-116)||(2410029-2410082)
chr2 (64-118)||(35555162-35555216)
chr2 (63-113)||(43530097-43530147)
chr2 (60-93)||(3235390-3235423)
chr2 (60-113)||(26857096-26857149)
chr2 (60-109)||(27237883-27237932)
chr2 (60-109)||(33525957-33526006)
chr2 (60-109)||(41042012-41042061)
chr2 (63-112)||(43456694-43456743)
chr2 (61-113)||(2964795-2964847)
chr2 (78-118)||(4550796-4550836)
chr2 (62-157)||(38388719-38388815)
chr2 (62-118)||(43065431-43065487)
[»] chr7 (22 HSPs)
chr7 (67-146)||(36598309-36598388)
chr7 (62-113)||(38010747-38010798)
chr7 (56-113)||(6601394-6601451)
chr7 (69-110)||(11048067-11048108)
chr7 (62-109)||(12234879-12234926)
chr7 (62-113)||(15740397-15740448)
chr7 (70-113)||(19719047-19719090)
chr7 (65-112)||(20888381-20888428)
chr7 (62-109)||(48157110-48157157)
chr7 (68-110)||(425813-425855)
chr7 (68-118)||(13960704-13960754)
chr7 (60-118)||(44615085-44615143)
chr7 (62-95)||(2825235-2825268)
chr7 (60-97)||(27496409-27496446)
chr7 (60-97)||(27503067-27503104)
chr7 (60-105)||(27517850-27517895)
chr7 (68-113)||(30317001-30317046)
chr7 (68-109)||(39539771-39539812)
chr7 (69-110)||(43219633-43219674)
chr7 (70-110)||(11047908-11047948)
chr7 (62-118)||(27708778-27708834)
chr7 (62-118)||(46082069-46082125)
[»] scaffold0608 (1 HSPs)
scaffold0608 (68-113)||(9623-9668)
[»] scaffold0311 (1 HSPs)
scaffold0311 (57-118)||(10598-10659)
[»] scaffold0147 (1 HSPs)
scaffold0147 (62-108)||(4926-4972)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 38318943 - 38319127
Alignment:
Q  12 gagtttggagttcttttcttatgtataagctgttttcataagcagagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38318943 gagtttggagttcttttcttatgtataagctgttttcataagcagagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 38319042  T
Q  112 attagctatgcccaacaatcacacaattgcgtatgctagtagataaatttgataaactcaaataatccaacaatgagtgaaggct 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38319043 attagctatgcccaacaatcacacaattgcgtatgctagtagataaatttgataaactcaaataatccaacaatgagtgaaggct 38319127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 482831 - 482782
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  482831 gtttatggaaataagctgaaaatatcatatgagcatgttataagttgttt 482782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 21574523 - 21574579
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||| |||  ||||||||||||||| ||||||||||||||| ||||    
T  21574523 ttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagct 21574579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 48397646 - 48397703
Alignment:
Q  98 tataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagat 155  Q
    ||||||||||||||||||||| | || ||||||| ||||| ||| |||||||||||||    
T  48397646 tataagttgttttcattagctcttccaaacaatctcacaaatgcttatgctagtagat 48397703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 53952079 - 53952132
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||| |||||||||||||| |||| ||||||||||||| || |||||||||    
T  53952079 gtttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcat 53952132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 48049019 - 48048963
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| |||||||| |||||| || ||||| |||||| ||||    
T  48049019 ttatggaaataagctgaaaacagcttatggacatgtcatgagttggtttcataagct 48048963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 52619042 - 52619090
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcattag 116  Q
    ||||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  52619042 aaataaggtgaaaatagcttatgaacatgtcataaattgtttttattag 52619090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 2128294 - 2128255
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataa 102  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  2128294 tatgaaaataagctgaaaacagcttatgaacatgttataa 2128255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 3044296 - 3044249
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||| ||||||| |||||| ||||||||||||||| |||||||||||    
T  3044296 ttatgaaaataagttgaaaacagcttatgaacatgtcataagttgttt 3044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 5391912 - 5391963
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||| |||||||||    
T  5391912 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcat 5391963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 29427678 - 29427631
Alignment:
Q  66 ggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||| |||||||||||||||||||||| || || |||||||||    
T  29427678 ggaaataagttgaaaatagcttatgaacatgtcattaggtgttttcat 29427631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 31010435 - 31010482
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||| ||||||||||| |||||||| |||||| |||||||||||    
T  31010435 ttatggaattaagctgaaaacagcttatggacatgtcataagttgttt 31010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 42745071 - 42745118
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||| |||||| | ||||||||||||| |||||||||||    
T  42745071 ttatggaaataagatgaaaacaacttatgaacatgtcataagttgttt 42745118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 43116478 - 43116427
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| |||||| | |||| ||||||||||||||||||||||||    
T  43116478 ttatgcaaataagttgaaaagaacttaagaacatgttataagttgttttcat 43116427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 50004685 - 50004732
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||| ||||||||||||||| |||||| |||||||| |||||||||||    
T  50004685 ttattgaaataagctgaaaacagcttaagaacatgtcataagttgttt 50004732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 1360565 - 1360523
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataa 102  Q
    |||| |||||||||||||||||||||||||| |||||| ||||    
T  1360565 gtttgtggaaataagctgaaaatagcttatggacatgtcataa 1360523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 27290936 - 27290882
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||| ||||||||  ||||| ||||| ||||||||| ||||    
T  27290936 atggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataagct 27290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 52412940 - 52412894
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||||||| ||||||| ||||||| ||| |||||||    
T  52412940 tatggaaataagctgaaaacagcttataaacatgtcataggttgttt 52412894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 9279365 - 9279316
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||| |||||||||||||||| |||||||  |||||||||||| |||||    
T  9279365 gtttaaggaaataagctgaaaacagcttatatacatgttataagctgttt 9279316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 30750031 - 30750084
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||  ||| ||||||| |||||||| |||||| |||||||||||||||    
T  30750031 gtttatggatctaatctgaaaacagcttatggacatgtcataagttgttttcat 30750084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 36101601 - 36101650
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||| |||||||||||||| ||||| ||||||||| ||||| |||||||    
T  36101601 ttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 36139911 - 36139960
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||| |||||||||||||| ||||| ||||||||| ||||| |||||||    
T  36139911 ttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 36200131 - 36200176
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||| | |||||| |||||| |||||||||||    
T  36200131 atggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 39723270 - 39723229
Alignment:
Q  69 aataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  39723270 aataagctgaaaacagcttatgaacatgtcataagctgtttt 39723229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 44374680 - 44374639
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    ||||||||||| ||||||||||||||| |||||| |||||||    
T  44374680 atggaaataaggtgaaaatagcttatgtacatgtcataagtt 44374639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 49465975 - 49465926
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||| ||||||||| | ||| |||||| |||||||||||    
T  49465975 gtttatggaaataagttgaaaatagttcatggacatgtcataagttgttt 49465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 50952366 - 50952415
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||||||||||||| |||| || |||||||||||| ||||| |||||||    
T  50952366 ttatggaaataagcttaaaacagtttatgaacatgtcataagctgttttc 50952415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 14548758 - 14548702
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| ||| ||| || |||| ||| ||||||||||| ||||    
T  14548758 ttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagct 14548702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 20267164 - 20267208
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||||| | ||||  |||||||||||||||||||    
T  20267164 tggaaataagctgaaaacaacttaccaacatgttataagttgttt 20267208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 26330360 - 26330304
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||| ||||||| | | ||||||||||| | ||||||||||||| ||||    
T  26330360 ttatggaaataacctgaaaagaacctatgaacatgtcagaagttgttttcataagct 26330304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 37273167 - 37273223
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||| |||||| | |||||| |||||| ||||||||||| ||| ||||    
T  37273167 ttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagct 37273223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 42545677 - 42545713
Alignment:
Q  66 ggaaataagctgaaaatagcttatgaacatgttataa 102  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  42545677 ggaaataagctgaaaacagcttatgaacatgtaataa 42545713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 45432976 - 45432936
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataa 102  Q
    |||||||||||||||||||| | ||||||||||||| ||||    
T  45432976 ttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 45541611 - 45541655
Alignment:
Q  69 aataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| ||||||||||||||| ||||| |||||||||    
T  45541611 aataacctgaaaacagcttatgaacatgtcataagctgttttcat 45541655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 53762425 - 53762381
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  53762425 aaataagttgaaaacagcttatgaacatgtcataagctgttttca 53762381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 40728454 - 40728396
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctat 120  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  40728454 ttatggaaataaactgaaaatatcttatgaacatgctataagttgttttcataagctat 40728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 39049304 - 39049400
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataa 157  Q
    |||||| ||| ||| |||||| |||||||  |||||||||||||||||||||| |||| |  | ||||||| ||||| ||  |||||||||||||||    
T  39049304 tttatgcaaacaagttgaaaacagcttattgacatgttataagttgttttcataagctttcacaaacaatctcacaaatgtttatgctagtagataa 39049400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 37444457 - 37444406
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| |||||||||||||||| ||||| ||||||||| |||||||||||||    
T  37444457 ttatgaaaataagctgaaaataacttataaacatgttaaaagttgttttcat 37444406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 29169136 - 29169086
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||||||| |||||||||||||| | |||||||||| ||||||    
T  29169136 gtttatggaaataagccgaaaatagcttatggatatgttataagctgtttt 29169086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 42215343 - 42215289
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattag 116  Q
    ||||| |||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  42215343 ttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattag 42215289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 43368731 - 43368681
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||| ||||    
T  43368731 aaataagttgaaaatagctaatgaacatgtcataagttgttttcataagct 43368681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 926511 - 926556
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||    
T  926511 tggaaataagctgaaaacggcttatgaacatgtcataagttgtttt 926556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 21653114 - 21653163
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||| ||||    
T  21653114 ttatgaaaataagctgaaaatagcttatgaacgtgtcataagttgatttc 21653163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 38537626 - 38537675
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  38537626 atggaaataagccgaaaatagcttatgagcatgtcgtaagttgttttcat 38537675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 3254263 - 3254307
Alignment:
Q  67 gaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  3254263 gaaataagctgaaaacagcttatgaacatgtcataagctgttttc 3254307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 5069730 - 5069786
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| |||||||||||||||  ||||||||||||||||||| ||||| ||| ||||    
T  5069730 ttatgaaaataagctgaaaatgacttatgaacatgttataagatgtttccataagct 5069786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 6950355 - 6950451
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataaa 158  Q
    |||||||||||||||||||| | |||||  |||||| ||| ||||||| ||| |||| | || ||||||| ||||| ||  ||||| ||||||||||    
T  6950355 ttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaa 6950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 9835937 - 9835881
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||| |||||| ||||||||||||||| ||||| ||||| ||| ||||    
T  9835937 ttatggaaataagatgaaaacagcttatgaacatgtcataagctgtttacataagct 9835881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 14949899 - 14949955
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| ||||||||||||||| |||||||| |||||| ||||||| ||||||| ||||    
T  14949899 ttatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagct 14949955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 7646239 - 7646290
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||||||||||||| || ||||||| |||||  ||||||||    
T  7646239 ttatggaaataagctgaaaatagctgatcaacatgtcataagcagttttcat 7646290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 10383918 - 10383969
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||| ||| |||||||||| |||| ||||| |||||||||    
T  10383918 ttatggaaataagctgtaaacagcttatgaaaatgtcataagctgttttcat 10383969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 12851209 - 12851260
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| |||||||| ||||| | ||||||||||||||||||| |||||||||    
T  12851209 ttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcat 12851260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 29169973 - 29169882
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtag 153  Q
    |||||||||| |||| ||||||||||||| | |||| ||| | ||||||||| |||| | || ||||||  ||||| ||| |||||||||||    
T  29169973 ttatggaaatgagctaaaaatagcttatggatatgtcatatgctgttttcataagctctcccaaacaatttcacaagtgcttatgctagtag 29169882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 30191181 - 30191122
Alignment:
Q  59 tgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||||||||||| |  || ||||||||| ||||||||||| ||| ||||    
T  30191181 tgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagct 30191122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 34849136 - 34849191
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttat-aagttgttttcattag 116  Q
    |||||||||| |||||||||  |||||||||||||| || ||||||||||||||||    
T  34849136 ttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattag 34849191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 43504784 - 43504835
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||||||| ||||||| |||| ||  ||||||||||||||    
T  43504784 ttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcat 43504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 43704413 - 43704366
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||| |||| || |||||||||||| |||||||||||    
T  43704413 ttatggaaataagcttaaaacagtttatgaacatgtcataagttgttt 43704366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 8060669 - 8060758
Alignment:
Q  35 tataagctgttttcataagca------gagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||||      ||| | |||||||||||||||||||||| ||||||||| |   |||| |||||||||| ||||    
T  8060669 tataagctgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaactttccataatttgttttcataagct 8060758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 11415180 - 11415234
Alignment:
Q  55 agagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||| |||| || ||||||||||| ||||||||||| |||||||||||| |||||    
T  11415180 agagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgttt 11415234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 29262918 - 29262864
Alignment:
Q  55 agagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||| ||||| |||||| |  |||||||||||||||||||||| |||||||||||    
T  29262918 agagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgttt 29262864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 36643929 - 36643883
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||||| ||| |||| ||| |||||||||||    
T  36643929 tatggaaataagctgaaaatagtttacgaacgtgtgataagttgttt 36643883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 37740462 - 37740417
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||    
T  37740462 tatggaaataagctgaaaatag-ttatggacatgtcataagttgttt 37740417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 2492967 - 2493012
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    ||||||||||||||||  |||| | |||||||||||||||||||||    
T  2492967 gtttatggaaataagcaaaaaacaacttatgaacatgttataagtt 2493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 2595027 - 2594986
Alignment:
Q  69 aataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||| | ||||||||||||| ||||||||||||    
T  2595027 aataagctgaaaacaacttatgaacatgtcataagttgtttt 2594986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 7107761 - 7107708
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||| | |||||  ||||||| ||||||||||||||||| ||||    
T  7107761 gtttatggaaataaacagaaaaccgcttatggacatgttataagttgttgtcat 7107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 11185256 - 11185301
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||| |||||| | ||||||||||||||||||| |||||    
T  11185256 atggaaataagttgaaaacaacttatgaacatgttataagatgttt 11185301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 20672783 - 20672824
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataag 103  Q
    ||||| |||||||||||||| ||||||||||||||| |||||    
T  20672783 ttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 25869305 - 25869260
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    |||||||||||||||||||||| | |||||| |||||| |||||||    
T  25869305 gtttatggaaataagctgaaaacaacttatggacatgtcataagtt 25869260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 41606940 - 41606891
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    |||||||||||||||||||| | ||| ||||||||| ||||| |||||||    
T  41606940 ttatggaaataagctgaaaacaacttttgaacatgtcataagctgttttc 41606891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 7918483 - 7918427
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| |||||||| || ||| |||||||||||||||  |||||||||||||| ||||    
T  7918483 ttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagct 7918427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 11121806 - 11121858
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||||||||||||||||||||| | |||| ||||| ||| | ||||||||    
T  11121806 gtttatggaaataagctgaaaatagataatgatcatgtcatatgctgttttca 11121858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 11183578 - 11183626
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||||||||||| |||||||  |||| | ||||||||||||    
T  11183578 ttatggaaataagctgaaaacagcttatagacatatcataagttgtttt 11183626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 30918146 - 30918201
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| | |||||||| |||| | ||||||||||||| ||||    
T  30918146 ttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgttttcataagct 30918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 31751594 - 31751562
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaaca 94  Q
    ||||| |||||||||||||||||||||||||||    
T  31751594 ttatgaaaataagctgaaaatagcttatgaaca 31751562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 31875632 - 31875576
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| ||||||| ||||||| ||||||| |||||| ||||||||||| ||| ||||    
T  31875632 ttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagct 31875576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 32172688 - 32172781
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataa 157  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||| ||| |||| | || ||| ||| ||||| ||| |||||||||| ||||    
T  32172688 atggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataa 32172781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 36882152 - 36882100
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  36882152 tttatggaaataagatgaaaataggttatgaacatgttatatgttgttttcat 36882100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 37611252 - 37611196
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||| ||||||| ||||||||||||||| | ||||||||||||| ||||    
T  37611252 ttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagct 37611196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 37787982 - 37787926
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||| ||||||| ||||||||||||||| | ||||||||||||| ||||    
T  37787982 ttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagct 37787926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 37794735 - 37794679
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| |||||||||| |||| ||||||||||||||| ||||||||||||||| ||||    
T  37794735 ttatcgaaataagctcaaaacagcttatgaacatgtcataagttgttttcataagct 37794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 17368709 - 17368760
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||||||||  || ||||||||||| |||||||||||||||    
T  17368709 ttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcat 17368760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 38728435 - 38728509
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacaca 136  Q
    |||||||||||||||||||| |||||| || ||||| ||||| | ||||||| |||| | || ||||||||||||    
T  38728435 ttatggaaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaacaatcacaca 38728509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 4619740 - 4619796
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||| |||||  ||||||||||||||| || |||||||||||| ||||    
T  4619740 ttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagct 4619796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 19177021 - 19177077
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||| | ||||||||||||| |||||| ||  ||||||||||||||||    
T  19177021 ttatggaaataaggtaaaaatagcttatggacatgtcatcggttgttttcattagct 19177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 37526236 - 37526180
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| ||||||| ||||||| ||| ||||| ||||| ||||    
T  37526236 ttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagct 37526180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 37690673 - 37690617
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| ||||||| ||||||| ||| ||||| ||||| ||||    
T  37690673 ttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagct 37690617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 11700438 - 11700368
Alignment:
Q  38 aagctgttttcataagcagagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||| |||||||  || ||||||| |||||| ||||||| |||||||| |||||| |||||||||||    
T  11700438 aagctgtttccataagct-agagtttatgaaaataatctgaaaacagcttatggacatgtcataagttgttt 11700368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 17258920 - 17258869
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| |||||||||||||| ||||||||||||||| ||||| | |||||||    
T  17258920 ttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcat 17258869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 18704073 - 18704026
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||| | |||||  ||||||||||||||||||    
T  18704073 ttatggaaataagctgaaaacaacttatagacatgttataagttgttt 18704026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 28413323 - 28413288
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacat 95  Q
    |||||||||||||||||||||| |||||||||||||    
T  28413323 gtttatggaaataagctgaaaacagcttatgaacat 28413288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Original strand, 36638780 - 36638815
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgt 97  Q
    |||||||||||||||||||| |||||||||||||||    
T  36638780 ttatggaaataagctgaaaaaagcttatgaacatgt 36638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 11615534 - 11615568
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatg 96  Q
    |||||||||||||||||||| ||||||||||||||    
T  11615534 ttatggaaataagctgaaaacagcttatgaacatg 11615568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 12467166 - 12467212
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtt 108  Q
    ||||| |||||||||||||| ||||||| ||||||| ||||||||||    
T  12467166 ttatgaaaataagctgaaaacagcttataaacatgtcataagttgtt 12467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 499770 - 499717
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||||||||| | ||| | ||||||| ||||| |||||||||    
T  499770 gtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcat 499717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 1899186 - 1899235
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||||||||||| | |||||| |||||| ||||| ||||||    
T  1899186 tttatggaaataagctgaaaacaacttatgcacatgtcataagctgtttt 1899235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 12521561 - 12521594
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacat 95  Q
    |||||||||||||||||||| |||||||||||||    
T  12521561 ttatggaaataagctgaaaacagcttatgaacat 12521594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 8089969 - 8090025
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| |||||||||||||| |||||| ||| || | ||||||||||||||| ||||    
T  8089969 ttatgaaaataagctgaaaacagcttaggaatatatcataagttgttttcataagct 8090025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 9106854 - 9106906
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatg-aacatgttataagttgttttcat 113  Q
    |||||||||||||||||||| |||||||| || |  |||||||||||||||||    
T  9106854 ttatggaaataagctgaaaacagcttatgaaatacattataagttgttttcat 9106906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 25461354 - 25461310
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    |||||| |||||||||||||| |||| |||||||||| |||||||    
T  25461354 tttatgaaaataagctgaaaacagctaatgaacatgtcataagtt 25461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 35445881 - 35445829
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||| ||||||| |||||||  || |||||||||||||||| |||||||||    
T  35445881 tttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcat 35445829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 37588397 - 37588341
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| ||||||| ||||| | ||| ||||| ||||| ||||    
T  37588397 ttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagct 37588341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 39105497 - 39105549
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaac-atgttataagttgttttcat 113  Q
    ||||| ||||||||| |||||||||||||||| |||| ||||| |||||||||    
T  39105497 ttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcat 39105549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 22743519 - 22743570
Alignment:
Q  67 gaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  22743519 gaaataagctgaaaacagcttatgaacatgtaataagttgttttcatgagct 22743570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 28641786 - 28641725
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcc 123  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| ||||||||| |||| ||||    
T  28641786 ttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataagctctgcc 28641725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 4420676 - 4420723
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  4420676 ttatggaaataagctgaaaacagcttatgaacatgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 20368217 - 20368166
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| ||||| |||||||||||||||| |||||||||||||||    
T  20368217 ttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcat 20368166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 34403888 - 34403937
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||||||||||| |||||| | ||||||||||||| |||||||||||||    
T  34403888 ttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttc 34403937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 725692 - 725636
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||||||  || | |||||| ||||||||||||||| ||||    
T  725692 ttatggaaataagctgaaaatagtctacggacatgtcataagttgttttcataagct 725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 7931759 - 7931707
Alignment:
Q  66 ggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||| | |||| |||||||| ||||||||||||||| ||||    
T  7931759 ggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagct 7931707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 27615311 - 27615263
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||| |  |||||||||||||||||||||| |||||||||||    
T  27615311 tttatggaaattacttgaaaatagcttatgaacatgtcataagttgttt 27615263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 32171420 - 32171364
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||||||||| || || ||| ||||| ||||||||| ||||    
T  32171420 ttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagct 32171364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 33498652 - 33498708
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||||| | |||  |||||| ||||||||||||||| ||||    
T  33498652 ttatggaaataagctgaaaataacctatagacatgtcataagttgttttcataagct 33498708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 1575928 - 1575979
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| | |||| ||||||||||||||| |||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcat 1575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 5566213 - 5566158
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||| |||||| | |||||| |||||| ||||| ||||||||||||||    
T  5566213 tatggaaataagttgaaaacaacttatggacatgtaataagctgttttcattagct 5566158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 6536980 - 6537023
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    |||||||||||||||||||| | ||||||||||||| |||||||    
T  6536980 ttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 8010390 - 8010437
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||| ||||||| ||||||||||||||||||||||| || ||||||||    
T  8010390 ttatagaaataaactgaaaatagcttatgaacatgtcatgagttgttt 8010437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 8147094 - 8147047
Alignment:
Q  71 taagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  8147094 taagttgaaaatagcttatgcatatgttataagttgttttcataagct 8147047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 9668022 - 9667975
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||| |||||| |||||||| |||||| |||||||||||    
T  9668022 ttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 9667975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 31624123 - 31624174
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||| |||||||||    
T  31624123 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcat 31624174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 32578022 - 32577967
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||||||| |||| | | |||||| ||||||||||||||| ||||    
T  32578022 tatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagct 32577967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 27595611 - 27595557
Alignment:
Q  55 agagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||| ||||| |||||| |  |||||||||||||||||||||| |||||||||||    
T  27595611 agagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgttt 27595557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 27693483 - 27693429
Alignment:
Q  55 agagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||| ||||| |||||| |  |||||||||||||||||||||| |||||||||||    
T  27693483 agagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgttt 27693429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 696642 - 696683
Alignment:
Q  69 aataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  696642 aataagctgaaaacagcttatgaacatgtcataagctgtttt 696683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 34633162 - 34633109
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||| ||||||||||||||||||||  | ||||| ||| |||||||||||||||    
T  34633162 gtttgtggaaataagctgaaaatagactctgaacctgtcataagttgttttcat 34633109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 283128 - 283176
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||| |||||||||||||||||| ||||| |||||| ||||| ||||||    
T  283128 ttatagaaataagctgaaaatagtttatggacatgtcataagctgtttt 283176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 2455843 - 2455899
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||| ||||||||| |||||  ||||| ||||||||||| ||| ||||    
T  2455843 ttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagct 2455899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 3155209 - 3155253
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgt 107  Q
    ||||||||||||||||||| |||||||  |||||| |||||||||    
T  3155209 tatggaaataagctgaaaacagcttatagacatgtcataagttgt 3155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 20356131 - 20356099
Alignment:
Q  71 taagctgaaaatagcttatgaacatgttataag 103  Q
    |||||||||||||||| ||||||||||||||||    
T  20356131 taagctgaaaatagctaatgaacatgttataag 20356099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 30863279 - 30863335
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| ||| ||||||||||| | |||||| |||||| ||||||||||||||| ||||    
T  30863279 ttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataagct 30863335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 31420978 - 31421034
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| |||||||||||||| | |||||||| |||  ||||||||||||||| ||||    
T  31420978 ttatgaaaataagctgaaaacaacttatgaatatgcgataagttgttttcataagct 31421034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 22662283 - 22662233
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  22662283 tatggaaataagctgaaaatagcttatgaacatatcataagtttttttcat 22662233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 32831550 - 32831504
Alignment:
Q  67 gaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32831550 gaaataagctgaaaatatcttatgaatatgttataagttgttttcat 32831504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 6466083 - 6466035
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  6466083 ttatggaaataagttgaaaatagcttatgaacatctcataagttgtttt 6466035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 1312872 - 1312923
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    |||||||||||||||||||||| || ||||||| |||| |||||||||||||    
T  1312872 gtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttttc 1312923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 20936266 - 20936215
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||| |||||| ||||||||||||| | |||||||||||||||    
T  20936266 ttatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcat 20936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 22666762 - 22666712
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||| ||||||||||||||||||||| | ||||||| |||||||    
T  22666762 tatggaaataaactgaaaatagcttatgaacatatcataagtttttttcat 22666712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 43886167 - 43886117
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||||||||||||||||| |||  ||||| |||||||||    
T  43886167 tatggaaataagctgaaaatagcttatgaaaatgccataagctgttttcat 43886117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 1965977 - 1966030
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||| | |||| ||||||||||||||| ||||||||||||||| ||||    
T  1965977 tggaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagct 1966030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 2874667 - 2874614
Alignment:
Q  56 gagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||| |||||||||||||| |||||||| ||||| |||||| |||||||||||    
T  2874667 gagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgttt 2874614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 27405848 - 27405889
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  27405848 aaataagctgaaaatagcttaagaaaatgttataagttgttt 27405889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 6987778 - 6987682
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataaa 158  Q
    ||||||||||||| ||||||||| ||||| |||||| ||||||||| | ||| |||| | || |||| || |||||   | ||||||||||||||||    
T  6987778 ttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcacaaacacttatgctagtagataaa 6987682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 29467668 - 29467620
Alignment:
Q  55 agagtgtttatggaaataagctgaaaatagcttatgaacatgttataag 103  Q
    |||| |||||||||||||||||||||| |||||||| |||||| |||||    
T  29467668 agagagtttatggaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 50800064 - 50799992
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaa 137  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||| |||||| | | || ||||||| |||||    
T  50800064 tggaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctcccaaacaatctcacaa 50799992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 1137745 - 1137796
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||| ||||||| | ||||||||||||| ||||| |||||||||    
T  1137745 ttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcat 1137796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 2996607 - 2996662
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| ||||||| |||||| |||||||| |||||| ||||||||||||||| ||||    
T  2996607 tatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagct 2996662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 19395103 - 19395060
Alignment:
Q  67 gaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  19395103 gaaataagctgaaaatagcttataaacatgtcgtaagttgtttt 19395060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 41603448 - 41603413
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgt 97  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41603448 ttatggaaataagctgaaaatagcttatgaatatgt 41603413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 8469413 - 8469363
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||||||| | ||||||||||||| |||| ||| ||||||    
T  8469413 tatggaaataagctgaaaacaacttatgaacatgtcataaattgctttcat 8469363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 7694049 - 7694012
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgt 97  Q
    |||||||||||||||||||||| | |||||||||||||    
T  7694049 gtttatggaaataagctgaaaacaacttatgaacatgt 7694012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 21593047 - 21593002
Alignment:
Q  58 gtgtttatggaaataagctgaaaatagcttatgaacatgttataag 103  Q
    |||||||||||||||||||||||  ||||||| ||||||| |||||    
T  21593047 gtgtttatggaaataagctgaaagcagcttataaacatgtcataag 21593002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 30631992 - 30632037
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||| |||| ||||||||||||||  ||||||||||||    
T  30631992 tggaaataagcttaaaacagcttatgaacatgccataagttgtttt 30632037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 37575975 - 37575922
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||| ||||||||| | |||||||  |||||||||||| |||||||    
T  37575975 gtttatggaaatgagctgaaaacaacttatgagtatgttataagttattttcat 37575922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 52419648 - 52419604
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||||    
T  52419648 aaataagctgaaa-tagtttatgaacatgtaataagttgttttcat 52419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 2841654 - 2841710
Alignment:
Q  57 agtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||| |||||||||||| | |||||  |||||| |||||||| ||||||    
T  2841654 agtgtttatggatataagctgaaaacaacttattgacatgtcataagttgctttcat 2841710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 45128347 - 45128291
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| |||| ||| ||||| ||| |||||||| ||| ||||    
T  45128347 ttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagct 45128291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 53315359 - 53315415
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| ||||||| | ||||||||||||| |||||| ||| ||||||||||| ||||    
T  53315359 ttatgaaaataagttaaaaatagcttatggacatgtgatatgttgttttcataagct 53315415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 37593721 - 37593667
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattag 116  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  37593721 ttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattag 37593667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 51929881 - 51929823
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctat 120  Q
    |||||||||||| ||||||||| ||||||||| ||||||||| ||||||||| ||||||    
T  51929881 ttatggaaataacctgaaaatatcttatgaacttgttataagctgttttcataagctat 51929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 6262056 - 6262109
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||| ||||    
T  6262056 tggaaataagttgaaaatagcttatgaacatgtcataagttgttctcataagct 6262109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 35925721 - 35925774
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||    
T  35925721 gtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcat 35925774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 4699652 - 4699601
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  4699652 ttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcat 4699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 6231853 - 6231758
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataa 157  Q
    |||| ||||||||||||||| || ||||| |||||| || |||||||| ||| |||||| |  ||||||| ||||| ||  |||||||||||||||    
T  6231853 ttatagaaataagctgaaaacagtttatggacatgtcattagttgtttccatgagctatccagaacaatctcacaaatgtttatgctagtagataa 6231758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 15581287 - 15581382
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataa 157  Q
    |||| |||||| |||||||| |||||||  |||||| ||||||||||| |||||||| | || ||||||| ||||| ||| ||||  |||||||||    
T  15581287 ttatagaaataggctgaaaacagcttatagacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataa 15581382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 3597320 - 3597270
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||| ||||    
T  3597320 gtttatggaaataagctgaaaatagcttatggccatgtcataagttatttt 3597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 6976956 - 6977013
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||| | |||| ||||||||||||||| ||||||||||| ||||||||    
T  6976956 gtttatggaaataagtt-aaaacagcttatgaacatgtcataagttgtttccattagct 6977013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 4481969 - 4482014
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  4481969 aaataagctaaaaacagcttatgaacatgtaataagttgttttcat 4482014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 15437994 - 15438043
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||| ||||||||||||||| || ||||||||||||| |||||||||||    
T  15437994 gtttacggaaataagctgaaagtaacttatgaacatgtcataagttgttt 15438043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 51695533 - 51695484
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaac-atgttataagttgttt 109  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  51695533 tttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgttt 51695484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 6292526 - 6292574
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||| |||||||||||||| ||||||||||||||| ||||| ||||||    
T  6292526 ttatgaaaataagctgaaaacagcttatgaacatgtcataagctgtttt 6292574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 15942785 - 15942733
Alignment:
Q  62 ttatggaaataagctgaaaata-gcttatgaacatgttataagttgttttcat 113  Q
    |||| ||||||||||||||| | |||||||||||||| |||||||||||||||    
T  15942785 ttattgaaataagctgaaaacatgcttatgaacatgtcataagttgttttcat 15942733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 31517777 - 31517729
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||| |||||||||||||| ||||||||||||||| || |||||||||    
T  31517777 ttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgtttt 31517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 43029439 - 43029383
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||||||||||||||||  |||||| ||||  ||||||||| ||||    
T  43029439 ttatggaaataagctgaaaatagcttatagacatgtaataaactgttttcataagct 43029383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 601072 - 601122
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 111  Q
    ||||||| |||||||||||||||||||||  ||||||| |||||||||||||    
T  601072 gtttatgaaaataagctgaaaatagctta-caacatgtcataagttgttttc 601122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 10280682 - 10280733
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||||||| || ||||||||||||||  |||||||||||||||    
T  10280682 ttatgaaaataagctgacaaaagcttatgaacatgaaataagttgttttcat 10280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 31118076 - 31118127
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||||||| | || |||||||||| ||||| |||||||||    
T  31118076 ttatggaaataagctgaaaacaactgatgaacatgtcataagatgttttcat 31118127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 3070118 - 3070080
Alignment:
Q  71 taagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  3070118 taagctgaaaacagcttatgaacatgtcataagttgttt 3070080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 4202182 - 4202140
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||    
T  4202182 aaataagctgaaaatagcttatggacatgtcataagctgtttt 4202140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 23445381 - 23445415
Alignment:
Q  76 tgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||||||||||||| ||||||||||||    
T  23445381 tgaaaatagcttatgaacatgtcataagttgtttt 23445415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 34405182 - 34405240
Alignment:
Q  54 cagagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||| | ||| ||| |||||||||||| ||||||||||||||||||| | ||||||    
T  34405182 cagagtgctgatgaaaaaaagctgaaaataacttatgaacatgttataagctcttttca 34405240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 1510008 - 1509959
Alignment:
Q  56 gagtgtttatggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    |||| |||||| |||||||||||||| |||| |||||||||| |||||||    
T  1510008 gagtatttatgaaaataagctgaaaacagctaatgaacatgtcataagtt 1509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 3244930 - 3244967
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgt 97  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  3244930 gtttatggaaataagttgaaaatagcttatggacatgt 3244967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 15579513 - 15579562
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||||||| || | |||||| |||||| |||||||||||    
T  15579513 gtttatggaaataagctgagaacaacttatggacatgtcataagttgttt 15579562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 17628635 - 17628688
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||| |||||||| |||||||| |||||| ||||||||||| ||| ||||    
T  17628635 tggaaatatgctgaaaacagcttatggacatgtcataagttgtttccataagct 17628688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 17778993 - 17779038
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||| |||||| || ||||||||| |||||||||||||||    
T  17778993 tggaaataaggtgaaaacagtttatgaacacgttataagttgtttt 17779038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 27820234 - 27820201
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaaca 94  Q
    |||||| |||||||||||||||||||||||||||    
T  27820234 tttatgaaaataagctgaaaatagcttatgaaca 27820201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 27820375 - 27820342
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaaca 94  Q
    |||||| |||||||||||||||||||||||||||    
T  27820375 tttatgaaaataagctgaaaatagcttatgaaca 27820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 35080101 - 35080060
Alignment:
Q  67 gaaataagctgaaaatagcttatgaacatgttataagttgtt 108  Q
    |||||||||| |||| ||||||||||||||| ||||||||||    
T  35080101 gaaataagctcaaaacagcttatgaacatgtcataagttgtt 35080060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 37811887 - 37811936
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||| |||||| || |||||||||||| ||||| |||||||||    
T  37811887 atggaaataagttgaaaacagtttatgaacatgtcataagctgttttcat 37811936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 38578567 - 38578612
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||| |||| | |||||||| ||||||||||||||||||||    
T  38578567 aaataagctcaaaacaacttatgaatatgttataagttgttttcat 38578612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 11941296 - 11941352
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaac-atgttataagttgttttcattagct 118  Q
    |||| |||||||||||||| ||||||||||| |||||||||| | ||||||| ||||    
T  11941296 tatgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagct 11941352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 12477323 - 12477271
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcatta 115  Q
    ||||||||||||||||||| | |||||| |||||| ||||| || ||||||||    
T  12477323 tatggaaataagctgaaaacaacttatggacatgtcataagctgctttcatta 12477271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 28287575 - 28287527
Alignment:
Q  66 ggaaataagctgaaaatag-cttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||| |  |||||||||||||||||| ||||||||||    
T  28287575 ggaaataagctgaaaacattcttatgaacatgttataaattgttttcat 28287527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 30257716 - 30257756
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataa 102  Q
    |||| ||||||||||||||| ||||||||||||||| ||||    
T  30257716 ttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 5133805 - 5133853
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  5133805 ttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttt 5133853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 1647269 - 1647320
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||||||| ||||||||| ||||| ||||| |||||||||    
T  1647269 ttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcat 1647320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 22681222 - 22681171
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||| |||| ||||||||||||||||||  |||||||||||    
T  22681222 ttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcat 22681171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 28039369 - 28039318
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||||||||||| |||||||||||| || |||| ||||||||||    
T  28039369 ttatggaaataagctgaaaacagcttatgaacaagtcataacttgttttcat 28039318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 1742071 - 1742013
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||||||| ||| ||||    
T  1742071 gtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagct 1742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 787363 - 787416
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||| |||||||||||| |||||||| |||||| ||||| |||||||||    
T  787363 gtttatggagataagctgaaaacagcttatggacatgtcataagctgttttcat 787416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 9174848 - 9174897
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaac-atgttataagttgtttt 110  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  9174848 ttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgtttt 9174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 10285893 - 10285950
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagcta 119  Q
    ||||||||||||| |||||| |||||||| |||||| ||||||| ||||||| |||||    
T  10285893 ttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataagcta 10285950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 29316812 - 29316764
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||||||||||||| | ||||||||||||| ||||| ||||||    
T  29316812 ttatggaaataagctgaaaagaacttatgaacatgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 14451084 - 14451037
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||||||||||||| ||||||||  ||||| ||||||||||||||    
T  14451084 tggaaataagctgaaaacagcttatggtcatgtcataagttgttttca 14451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 34652073 - 34652026
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||| |||||| |||||||| |||||| |||||||||||    
T  34652073 ttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 34652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 41809282 - 41809235
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||| |||| | ||||||||||||| |||||||||||    
T  41809282 ttatggaaataagctaaaaacaacttatgaacatgtcataagttgttt 41809235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 43529895 - 43529844
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| |||||| ||||||||||||||||||||||  ||||| |||||||||    
T  43529895 ttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcat 43529844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 44438873 - 44438826
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||||||||||||| || |||||||||||| ||||| ||||||||    
T  44438873 tggaaataagctgaaaacaggttatgaacatgtcataagctgttttca 44438826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 1939369 - 1939323
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtt 108  Q
    ||||||||||||| |||||| |||||||| |||||| ||||||||||    
T  1939369 ttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 2410082 - 2410029
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattag 116  Q
    |||||||||||||||||||||||| ||||||||||  |||||| |||| ||||||    
T  2410082 ttatggaaataagctgaaaatagc-tatgaacatgccataagtggtttccattag 2410029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 35555162 - 35555216
Alignment:
Q  64 atggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||||||||| |||||| ||||| ||||  ||||||||| ||||    
T  35555162 atggaaataagctgaaaatagtttatgatcatgtaataatctgttttcataagct 35555216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 43530147 - 43530097
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||| |||||||||||| ||||||||| ||||  |||||||||    
T  43530147 tatggaaataagttgaaaatagcttgtgaacatgtcataatctgttttcat 43530097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 3235423 - 3235390
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaac 93  Q
    |||||||||||||||||||||| |||||||||||    
T  3235423 gtttatggaaataagctgaaaacagcttatgaac 3235390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 26857149 - 26857096
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||| ||||||||||||||||||||  | ||||| ||| |||||||||||||||    
T  26857149 gtttgtggaaataagctgaaaatagactctgaacctgtcataagttgttttcat 26857096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 27237932 - 27237883
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||||| |||| |||||||| |||||| ||||| |||||    
T  27237932 gtttatggaaataagctaaaaacagcttatgtacatgtcataagctgttt 27237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 33526006 - 33525957
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  33526006 gtttatagaaataagctgaaaccaacttatggacatgttataagttgttt 33525957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 41042061 - 41042012
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    ||||||||||||||| |||||| |||| ||| |||||| |||||||||||    
T  41042061 gtttatggaaataagttgaaaacagctgatggacatgtaataagttgttt 41042012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 43456743 - 43456694
Alignment:
Q  63 tatggaaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||||||||||||||| || ||||| |||||| || |||||||||||    
T  43456743 tatggaaataagctgaaaacagtttatggacatgtcatgagttgttttca 43456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 2964847 - 2964795
Alignment:
Q  61 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||||||||| |||| |  ||||||| ||||| |||||||||    
T  2964847 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcat 2964795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 4550796 - 4550836
Alignment:
Q  78 aaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||||||||||| ||||||||||| ||| ||||    
T  4550796 aaaatagcttatgaacatgtcataagttgtttccataagct 4550836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 38388719 - 38388815
Alignment:
Q  62 ttatggaaataagctg-aaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatgctagtagataa 157  Q
    |||||||||||||||| |||| || |||||||||||| ||||||||||  ||| || | | || |||  |||||||| ||| || ||||||||||||    
T  38388719 ttatggaaataagctgaaaaacagtttatgaacatgtcataagttgttaccataagttctcccaaacggtcacacaagtgcttaagctagtagataa 38388815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 43065487 - 43065431
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||| ||||||||||||||| |  ||||| |||||| ||||||||||||||| ||||    
T  43065487 ttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagct 43065431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 36598388 - 36598309
Alignment:
Q  67 gaaataagctgaaaatagcttatgaacatgttataagttgttttcattagctatgcccaacaatcacacaattgcgtatg 146  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||| ||| |||| |  | ||||||| ||||||||| ||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaattgcttatg 36598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 38010747 - 38010798
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||||||||| |||| ||||||||||||||||||  |||||||||||    
T  38010747 ttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcat 38010798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 6601394 - 6601451
Alignment:
Q  56 gagtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||| ||||||||||| ||||||||||| |||| |||||| ||||||||||    
T  6601394 gagtgcttatgaaaataagctgagaatagcttatggacattttataatttgttttcat 6601451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 11048067 - 11048108
Alignment:
Q  69 aataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  11048067 aataagctgaaaacagcttatgaacatgtcataagttgtttt 11048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 12234926 - 12234879
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||    
T  12234926 ttatggaaataagctgaaaacagcttatagacatgtcataagttgttt 12234879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 15740448 - 15740397
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||| ||||||| | |||| ||||||||||||||| |||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcat 15740397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 19719047 - 19719090
Alignment:
Q  70 ataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    |||||||||||| || |||||||||||| |||||||||||||||    
T  19719047 ataagctgaaaacagtttatgaacatgtcataagttgttttcat 19719090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 20888428 - 20888381
Alignment:
Q  65 tggaaataagctgaaaatagcttatgaacatgttataagttgttttca 112  Q
    ||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  20888428 tggaaataagctgaaaacaacttatgaacatggcataagttgttttca 20888381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 48157157 - 48157110
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||    
T  48157157 ttatggaaataagctgaaaacagcttatggacatggcataagttgttt 48157110  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 425855 - 425813
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||    
T  425855 aaataagctggaaatagcttatgaacatgtcataagctgtttt 425813  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 13960754 - 13960704
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    |||||||||||| |||||||||| || ||||||||| ||||||||| ||||    
T  13960754 aaataagctgaacatagcttatggacttgttataagctgttttcataagct 13960704  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 44615143 - 44615085
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||  |||||| ||||| || |||||| ||||||||||||||| ||||    
T  44615143 gtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagct 44615085  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 2825268 - 2825235
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacat 95  Q
    |||||||||||||||||||||| |||||||||||    
T  2825268 ttatggaaataagctgaaaataacttatgaacat 2825235  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 27496446 - 27496409
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgt 97  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  27496446 gtttatggaaataagctgaaaacagcttatggacatgt 27496409  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 27503104 - 27503067
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgt 97  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  27503104 gtttatggaaataagctgaaaacagcttatggacatgt 27503067  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 27517895 - 27517850
Alignment:
Q  60 gtttatggaaataagctgaaaatagcttatgaacatgttataagtt 105  Q
    ||||||||||||||||||||||  ||||||| |||||| |||||||    
T  27517895 gtttatggaaataagctgaaaactgcttatggacatgtcataagtt 27517850  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 30317001 - 30317046
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||| |||||| ||||||| ||||| |||||||||||||||||    
T  30317001 aaataagttgaaaacagcttattaacattttataagttgttttcat 30317046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 39539812 - 39539771
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttt 109  Q
    |||||||||||||| |||||||| |||||| |||||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagttgttt 39539771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 43219674 - 43219633
Alignment:
Q  69 aataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  43219674 aataagctgaaaacagcttatgaacatgtcataagctgtttt 43219633  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 11047908 - 11047948
Alignment:
Q  70 ataagctgaaaatagcttatgaacatgttataagttgtttt 110  Q
    ||||||| |||| ||||||||||||||| ||||||||||||    
T  11047908 ataagctaaaaacagcttatgaacatgtcataagttgtttt 11047948  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 27708834 - 27708778
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| ||||||| ||||||||||||||||||| ||| ||| || ||||||| ||||    
T  27708834 ttatgaaaataagttgaaaatagcttatgaacacgttgtaaattattttcataagct 27708778  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 46082069 - 46082125
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||| |||||||||||||| | ||||||  ||||| ||||||||||||||| ||||    
T  46082069 ttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagct 46082125  T

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Target: scaffold0608 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9668 - 9623
Alignment:
Q  68 aaataagctgaaaatagcttatgaacatgttataagttgttttcat 113  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  9668 aaataagctaaaaacagcttatgaacatgtaataagttgttttcat 9623  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 10659 - 10598
Alignment:
Q  57 agtgtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcattagct 118  Q
    ||||||||||||||||||||||||| | |||||| |||||| || |||||||| ||| ||||    
T  10659 agtgtttatggaaataagctgaaaacaacttatggacatgtcattagttgtttacataagct 10598  T

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Target: scaffold0147 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 4972 - 4926
Alignment:
Q  62 ttatggaaataagctgaaaatagcttatgaacatgttataagttgtt 108  Q
    |||||||  ||||||||||| | ||||||||||||||||||||||||    
T  4972 ttatggagttaagctgaaaacaacttatgaacatgttataagttgtt 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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