View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7007_low_7 (Length: 308)
Name: NF7007_low_7
Description: NF7007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7007_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 37640864 - 37640590
Alignment:
| Q |
17 |
caagattgaatctgacggtaacctcgccgctaattgttccggaatcgctgatatccctttcgccggaagagtattttctccaagagcgagacacttgaag |
116 |
Q |
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| T |
37640864 |
caagattgaatctgacggtaacctcgccgctaattgttccggaatcgctgatatccctttcgccggaagagtattttctccaagagcgagacacttgaag |
37640765 |
T |
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| Q |
117 |
atgaaatcgaataatctagaagttgtttcgagttctggatcgaagaagattcccccgaaaaacggtcggaagaatcttccgatgatcgaatctgaaaatc |
216 |
Q |
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| T |
37640764 |
atgaaatcgaataatctagaagttgtttcgagttctggatcgaagaagattcccccgaaaaacggtcggaagaatcttccgatgatcgaatctgaaaatc |
37640665 |
T |
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| Q |
217 |
ctagcttcttcagtaagtcaattgtgggaatttcttctgcggtgagaatttgttcatcggattttgtaaggacac |
291 |
Q |
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| T |
37640664 |
ctagcttcttcagtaagtcgattgtgggaatttcttctgcggtgagaatttgttcatcggattttgtaaggacac |
37640590 |
T |
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