View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7008_low_5 (Length: 211)

Name: NF7008_low_5
Description: NF7008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7008_low_5
NF7008_low_5
[»] chr7 (38 HSPs)
chr7 (25-198)||(19930884-19931057)
chr7 (78-134)||(12843171-12843227)
chr7 (76-128)||(22602704-22602756)
chr7 (88-132)||(38134412-38134456)
chr7 (77-132)||(7328686-7328741)
chr7 (77-132)||(15902831-15902886)
chr7 (79-132)||(6630909-6630962)
chr7 (71-132)||(7438715-7438776)
chr7 (77-130)||(17307904-17307957)
chr7 (88-132)||(4008570-4008614)
chr7 (88-132)||(4013962-4014006)
chr7 (72-132)||(11665430-11665490)
chr7 (88-132)||(12278844-12278888)
chr7 (72-132)||(35297662-35297722)
chr7 (77-132)||(16341505-16341560)
chr7 (69-132)||(18013061-18013124)
chr7 (69-132)||(19206059-19206122)
chr7 (69-132)||(26329369-26329432)
chr7 (89-132)||(42720897-42720940)
chr7 (82-132)||(2525844-2525894)
chr7 (77-131)||(5548686-5548740)
chr7 (88-130)||(18233604-18233646)
chr7 (82-132)||(20549800-20549850)
chr7 (90-132)||(36314635-36314677)
chr7 (90-132)||(38143232-38143274)
chr7 (90-132)||(44172898-44172940)
chr7 (83-132)||(5835256-5835305)
chr7 (82-131)||(9482944-9482993)
chr7 (83-132)||(24146825-24146874)
chr7 (99-132)||(28943431-28943464)
chr7 (79-127)||(1885587-1885635)
chr7 (88-128)||(3520348-3520388)
chr7 (96-132)||(11700812-11700848)
chr7 (102-163)||(17930445-17930502)
chr7 (88-132)||(27732245-27732289)
chr7 (96-132)||(27980805-27980841)
chr7 (88-132)||(30606070-30606114)
chr7 (88-132)||(43250002-43250046)
[»] chr3 (29 HSPs)
chr3 (88-164)||(41319316-41319388)
chr3 (69-132)||(16192737-16192800)
chr3 (72-132)||(8039825-8039885)
chr3 (81-132)||(8930829-8930880)
chr3 (73-132)||(11665953-11666012)
chr3 (82-132)||(7928459-7928509)
chr3 (71-132)||(11093579-11093640)
chr3 (83-132)||(20691328-20691377)
chr3 (83-132)||(40150572-40150621)
chr3 (80-132)||(9210823-9210875)
chr3 (88-132)||(12704663-12704707)
chr3 (84-132)||(29508453-29508501)
chr3 (93-132)||(9624650-9624689)
chr3 (69-132)||(17005606-17005669)
chr3 (82-121)||(35222958-35222997)
chr3 (88-131)||(51512189-51512232)
chr3 (88-146)||(1389821-1389879)
chr3 (79-129)||(39002044-39002094)
chr3 (82-131)||(8789550-8789599)
chr3 (78-127)||(44427855-44427904)
chr3 (89-121)||(7948979-7949011)
chr3 (88-132)||(9789127-9789171)
chr3 (88-132)||(20503474-20503518)
chr3 (84-132)||(21161501-21161549)
chr3 (90-159)||(21478669-21478734)
chr3 (88-132)||(24205047-24205091)
chr3 (88-132)||(24633407-24633451)
chr3 (77-121)||(27513657-27513701)
chr3 (88-132)||(52369784-52369828)
[»] chr5 (36 HSPs)
chr5 (81-192)||(28296281-28296388)
chr5 (72-128)||(41091247-41091303)
chr5 (77-132)||(31084332-31084387)
chr5 (77-132)||(38749558-38749613)
chr5 (72-132)||(22423802-22423862)
chr5 (77-129)||(41558649-41558701)
chr5 (78-132)||(3966512-3966566)
chr5 (79-132)||(6471886-6471939)
chr5 (72-121)||(18592093-18592142)
chr5 (72-129)||(32444778-32444835)
chr5 (79-132)||(36838552-36838605)
chr5 (88-132)||(5467984-5468028)
chr5 (65-128)||(12264812-12264875)
chr5 (89-132)||(32630742-32630785)
chr5 (73-132)||(40211965-40212024)
chr5 (82-132)||(8420036-8420086)
chr5 (82-132)||(17925172-17925222)
chr5 (82-132)||(21576745-21576795)
chr5 (89-152)||(23287356-23287415)
chr5 (82-132)||(30502388-30502438)
chr5 (82-132)||(30542731-30542781)
chr5 (77-130)||(4991372-4991424)
chr5 (92-121)||(5399939-5399968)
chr5 (99-132)||(11596472-11596505)
chr5 (79-132)||(16199282-16199335)
chr5 (95-132)||(30098335-30098372)
chr5 (89-130)||(43208281-43208322)
chr5 (84-132)||(5616214-5616262)
chr5 (92-132)||(16881145-16881185)
chr5 (88-132)||(18607103-18607147)
chr5 (69-132)||(19552532-19552593)
chr5 (88-132)||(19737488-19737532)
chr5 (88-132)||(23012414-23012458)
chr5 (88-132)||(24906307-24906351)
chr5 (88-132)||(31264447-31264491)
chr5 (72-132)||(32766933-32766993)
[»] chr8 (33 HSPs)
chr8 (79-132)||(11927083-11927136)
chr8 (71-132)||(11944674-11944735)
chr8 (72-132)||(25172688-25172748)
chr8 (82-132)||(34897094-34897144)
chr8 (72-132)||(24362192-24362252)
chr8 (88-132)||(31236583-31236627)
chr8 (92-132)||(34201056-34201096)
chr8 (78-128)||(31548289-31548339)
chr8 (71-132)||(4122238-4122299)
chr8 (82-176)||(4786338-4786428)
chr8 (83-132)||(12606830-12606879)
chr8 (83-132)||(29198480-29198529)
chr8 (72-132)||(22651985-22652045)
chr8 (89-132)||(8798838-8798881)
chr8 (83-160)||(14134684-14134757)
chr8 (90-132)||(3508061-3508103)
chr8 (78-132)||(5307070-5307123)
chr8 (82-132)||(12985401-12985451)
chr8 (82-132)||(13844596-13844646)
chr8 (90-132)||(22770971-22771013)
chr8 (92-163)||(37225753-37225820)
chr8 (88-121)||(18964197-18964230)
chr8 (83-132)||(33382020-33382069)
chr8 (84-132)||(1639499-1639547)
chr8 (92-132)||(4611543-4611583)
chr8 (88-132)||(7658472-7658516)
chr8 (99-131)||(10441213-10441245)
chr8 (81-121)||(26902174-26902214)
chr8 (88-132)||(27213556-27213600)
chr8 (72-132)||(28745507-28745567)
chr8 (72-132)||(29447100-29447160)
chr8 (88-132)||(34222956-34223000)
chr8 (88-132)||(44067525-44067569)
[»] chr6 (51 HSPs)
chr6 (68-129)||(8931588-8931649)
chr6 (72-129)||(26562701-26562758)
chr6 (81-132)||(9617443-9617494)
chr6 (82-133)||(9629391-9629442)
chr6 (77-132)||(32320664-32320719)
chr6 (77-131)||(9024171-9024225)
chr6 (78-132)||(9025490-9025544)
chr6 (79-132)||(9195751-9195804)
chr6 (88-132)||(30866150-30866194)
chr6 (82-129)||(7377991-7378038)
chr6 (82-132)||(7265593-7265643)
chr6 (90-132)||(17168903-17168945)
chr6 (79-132)||(28862130-28862184)
chr6 (82-132)||(33001289-33001339)
chr6 (91-132)||(1532249-1532290)
chr6 (82-115)||(12690442-12690475)
chr6 (83-132)||(13851745-13851794)
chr6 (72-176)||(8713948-8714049)
chr6 (72-132)||(15443704-15443764)
chr6 (72-132)||(34073337-34073397)
chr6 (77-132)||(2117085-2117139)
chr6 (69-132)||(5462695-5462758)
chr6 (89-132)||(17341671-17341714)
chr6 (89-132)||(19040361-19040404)
chr6 (76-127)||(19369831-19369882)
chr6 (69-132)||(32313413-32313476)
chr6 (78-132)||(7086804-7086858)
chr6 (78-132)||(9027187-9027241)
chr6 (88-130)||(10157995-10158037)
chr6 (87-129)||(11591875-11591917)
chr6 (82-132)||(12627577-12627627)
chr6 (82-132)||(20371110-20371160)
chr6 (70-132)||(20576621-20576683)
chr6 (82-132)||(28715304-28715354)
chr6 (90-132)||(33419182-33419224)
chr6 (95-132)||(2140494-2140531)
chr6 (90-131)||(4864073-4864114)
chr6 (89-130)||(7112789-7112830)
chr6 (89-130)||(8781315-8781356)
chr6 (79-132)||(10294116-10294169)
chr6 (96-166)||(31579239-31579311)
chr6 (88-132)||(6299521-6299565)
chr6 (88-132)||(6306331-6306375)
chr6 (80-132)||(7151421-7151473)
chr6 (92-132)||(13815171-13815211)
chr6 (148-176)||(18367800-18367828)
chr6 (69-121)||(18367856-18367908)
chr6 (88-132)||(26178687-26178731)
chr6 (88-132)||(26314640-26314684)
chr6 (88-132)||(32299284-32299328)
chr6 (88-132)||(34446574-34446618)
[»] chr4 (35 HSPs)
chr4 (83-181)||(56049841-56049934)
chr4 (84-133)||(11110211-11110260)
chr4 (64-132)||(40742600-40742668)
chr4 (76-131)||(13134460-13134515)
chr4 (89-132)||(18513248-18513291)
chr4 (77-132)||(35952612-35952667)
chr4 (82-132)||(5654589-5654641)
chr4 (69-121)||(32915592-32915645)
chr4 (79-131)||(5225610-5225662)
chr4 (88-132)||(14465300-14465344)
chr4 (88-132)||(19230315-19230359)
chr4 (84-132)||(28158017-28158065)
chr4 (77-132)||(5775353-5775408)
chr4 (77-132)||(12895111-12895166)
chr4 (69-132)||(24613688-24613751)
chr4 (96-131)||(26276023-26276058)
chr4 (89-132)||(40774290-40774333)
chr4 (83-113)||(16066566-16066596)
chr4 (82-132)||(21945512-21945562)
chr4 (71-121)||(31602995-31603045)
chr4 (90-132)||(36635333-36635375)
chr4 (91-133)||(44796971-44797013)
chr4 (83-132)||(7214523-7214572)
chr4 (99-132)||(10546157-10546190)
chr4 (72-121)||(12708167-12708216)
chr4 (149-178)||(13483994-13484023)
chr4 (91-132)||(22440609-22440650)
chr4 (72-132)||(35723374-35723435)
chr4 (92-132)||(903931-903971)
chr4 (88-132)||(8820417-8820461)
chr4 (69-132)||(20743265-20743328)
chr4 (96-132)||(32910560-32910596)
chr4 (88-132)||(40613459-40613503)
chr4 (88-132)||(43300625-43300669)
chr4 (77-121)||(46160916-46160960)
[»] chr2 (32 HSPs)
chr2 (77-132)||(12668418-12668473)
chr2 (72-132)||(30717520-30717580)
chr2 (69-128)||(4882683-4882742)
chr2 (89-132)||(18570981-18571024)
chr2 (82-132)||(34691805-34691855)
chr2 (82-132)||(34714217-34714267)
chr2 (82-132)||(37411244-37411294)
chr2 (79-132)||(40681991-40682044)
chr2 (79-132)||(44860329-44860382)
chr2 (72-132)||(18420424-18420484)
chr2 (72-132)||(27286282-27286342)
chr2 (88-181)||(42205841-42205930)
chr2 (88-132)||(44605145-44605189)
chr2 (81-129)||(45000845-45000893)
chr2 (78-121)||(28341865-28341908)
chr2 (82-132)||(5367201-5367251)
chr2 (90-132)||(19613621-19613663)
chr2 (90-132)||(21616771-21616813)
chr2 (90-132)||(28121557-28121599)
chr2 (78-132)||(29970545-29970599)
chr2 (90-132)||(30563418-30563460)
chr2 (82-132)||(31026704-31026754)
chr2 (72-113)||(35056896-35056937)
chr2 (84-132)||(4229410-4229458)
chr2 (88-132)||(10535765-10535809)
chr2 (88-132)||(23718035-23718079)
chr2 (88-132)||(24105707-24105751)
chr2 (96-132)||(28412359-28412395)
chr2 (92-132)||(28677918-28677958)
chr2 (88-132)||(30471047-30471091)
chr2 (77-121)||(34784977-34785021)
chr2 (89-121)||(37402091-37402123)
[»] chr1 (35 HSPs)
chr1 (69-132)||(9828053-9828116)
chr1 (72-131)||(44482240-44482299)
chr1 (78-132)||(6427359-6427413)
chr1 (90-132)||(17425101-17425143)
chr1 (83-131)||(2445880-2445928)
chr1 (72-132)||(6612161-6612221)
chr1 (72-132)||(9629890-9629950)
chr1 (72-131)||(25361896-25361955)
chr1 (89-132)||(30847727-30847770)
chr1 (89-132)||(40747780-40747823)
chr1 (78-132)||(7918207-7918261)
chr1 (79-132)||(16164312-16164365)
chr1 (65-126)||(34371728-34371789)
chr1 (88-132)||(1864886-1864930)
chr1 (72-132)||(5376490-5376550)
chr1 (74-121)||(5944303-5944350)
chr1 (89-132)||(23804437-23804480)
chr1 (77-132)||(34712378-34712433)
chr1 (77-132)||(40285649-40285704)
chr1 (82-132)||(9709829-9709879)
chr1 (82-132)||(19637777-19637827)
chr1 (82-132)||(38078661-38078711)
chr1 (82-132)||(40181880-40181930)
chr1 (94-132)||(41017416-41017454)
chr1 (82-132)||(52903258-52903308)
chr1 (99-132)||(3921676-3921709)
chr1 (140-177)||(10475031-10475068)
chr1 (99-132)||(11571594-11571627)
chr1 (83-132)||(18190109-18190158)
chr1 (90-131)||(25098563-25098604)
chr1 (92-132)||(351094-351134)
chr1 (88-132)||(498403-498446)
chr1 (91-131)||(19324572-19324612)
chr1 (88-132)||(22794084-22794128)
chr1 (104-132)||(40996508-40996536)
[»] scaffold0022 (2 HSPs)
scaffold0022 (72-163)||(99875-99962)
scaffold0022 (83-132)||(90852-90901)
[»] scaffold0376 (1 HSPs)
scaffold0376 (81-132)||(6321-6372)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-132)||(9734-9797)
[»] scaffold0020 (1 HSPs)
scaffold0020 (78-132)||(135308-135362)
[»] scaffold0044 (1 HSPs)
scaffold0044 (72-133)||(53188-53249)
[»] scaffold0011 (1 HSPs)
scaffold0011 (83-181)||(240022-240116)
[»] scaffold0123 (1 HSPs)
scaffold0123 (77-129)||(44520-44572)
[»] scaffold0007 (1 HSPs)
scaffold0007 (88-132)||(225274-225318)
[»] scaffold0004 (2 HSPs)
scaffold0004 (89-121)||(101020-101052)
scaffold0004 (90-119)||(101098-101127)
[»] scaffold0320 (1 HSPs)
scaffold0320 (90-132)||(17044-17086)
[»] scaffold0110 (1 HSPs)
scaffold0110 (78-132)||(28859-28913)
[»] scaffold0085 (1 HSPs)
scaffold0085 (88-132)||(26402-26446)


Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 19930884 - 19931057
Alignment:
Q  25 acaattactcctaggagtaggcttgtcctggtttcggatacgtatctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatc 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  19930884 acaattactcctaggagtaggcttgtcctggtttcggatacgtatctgacattgacacgatatcgacacatataattacattgaattatgtcattttatc 19930983  T
Q  125 aaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtttgagcatgtgcttcacaggtt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19930984 aaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtttgagcatgtgcttcataggtt 19931057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 12843171 - 12843227
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattattga 134  Q
    |||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  12843171 gacacgacactgacacatgtaattacattgaattatgtaattttatcaaattattga 12843227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 22602704 - 22602756
Alignment:
Q  76 tcgacacgacatcgacacatataattacattgaattatgtcattttatcaaat 128  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||    
T  22602704 tcgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 38134412 - 38134456
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  38134412 cgacacatatgattacattgaattatgtcattttctcaaattatt 38134456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 7328686 - 7328741
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattatt 7328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 15902886 - 15902831
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||||||| | |||||||| ||||||||||||||||    
T  15902886 cgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatt 15902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 6630909 - 6630962
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||| ||||||| || | ||| ||||||||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattatt 6630962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 7438776 - 7438715
Alignment:
Q  71 tgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||| |||| |||||| | ||||||||||||||||||| ||||| ||||||||||    
T  7438776 tgacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattatt 7438715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 17307957 - 17307904
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||||||||| | ||||||||||||||| |||||||||| ||||| ||||||||    
T  17307957 cgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 4008570 - 4008614
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  4008570 cgacacatacaattacattgaatcatgtaattttatcaaattatt 4008614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 4013962 - 4014006
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  4013962 cgacacatacaattacattgaatcatgtaattttatcaaattatt 4014006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 11665430 - 11665490
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||| ||||||||||| |||||||| | |||||||||| ||||| ||||||||||    
T  11665430 gacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattatt 11665490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 12278888 - 12278844
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattatt 12278844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 35297662 - 35297722
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||| | ||||||||||||| | |||||||||| ||||| ||||||||||    
T  35297662 gacatcaacacgacaccaacacatataattataatgaattatgtgattttctcaaattatt 35297722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 16341560 - 16341505
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| || |||||||||||||| | |||||||| ||||| ||||||||||    
T  16341560 cgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatt 16341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 18013061 - 18013124
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| || |||||||||  |||||||||||||||| |||||||||| ||||| | ||||||||    
T  18013061 tctgaaatagacacgacactgacacatataattacactgaattatgtaatttttttaaattatt 18013124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 19206122 - 19206059
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| | ||| |||| ||||||||||||||| | |||||||||| ||||| ||||||||||    
T  19206122 tctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattatt 19206059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 26329369 - 26329432
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| |||||||||  ||||||||||||||||| |||||| |||  |||| ||||||||||    
T  26329369 tctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatt 26329432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 42720897 - 42720940
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||    
T  42720897 gacacatataattacatttaattatgtgattttttcaaattatt 42720940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 2525844 - 2525894
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||||| |||| |||||||||||||||||  ||||||||||    
T  2525844 cgacaccgacacatatgattatattgaattatgtcatttgctcaaattatt 2525894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 5548740 - 5548686
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||  |||||||||||||||| |||||||| | ||||| |||||||||    
T  5548740 cgacacgacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 18233604 - 18233646
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||||| |||||||||| |||||||||||||||| ||||||||    
T  18233604 cgacacctataattacactgaattatgtcattttctcaaatta 18233646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 20549850 - 20549800
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| ||||||| || ||||| ||||||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattatt 20549800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 36314635 - 36314677
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||    
T  36314635 acacatatgattacattgaaatatgtcattttctcaaattatt 36314677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 38143274 - 38143232
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||    
T  38143274 acacatataattacattaaattatgtgattttttcaaattatt 38143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 44172898 - 44172940
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| | ||||||||||||||||||||||| ||||||||||    
T  44172898 acacatgtgattacattgaattatgtcattttctcaaattatt 44172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 5835305 - 5835256
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactatt 5835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||| ||||||||||||||||| |||||| ||| ||||| |||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 24146874 - 24146825
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||||||| |||||||||||| ||||| | ||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattatt 24146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 28943431 - 28943464
Alignment:
Q  99 attacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| |||||||||||||||||||||||    
T  28943431 attacattgagttatgtcattttatcaaattatt 28943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 1885635 - 1885587
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaa 127  Q
    |||||||| |||||| | | ||||||||||||||||||||||| |||||    
T  1885635 acacgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 3520348 - 3520388
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaat 128  Q
    |||||||||||||||||||||||||| | ||||| ||||||    
T  3520348 cgacacatataattacattgaattatatgattttctcaaat 3520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 11700848 - 11700812
Alignment:
Q  96 ataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattatt 11700812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 17930502 - 17930445
Alignment:
Q  102 acattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgt 163  Q
    ||||||||| |||||||||| | ||||||    ||||||||||||||||||| |||||||||    
T  17930502 acattgaatgatgtcattttcttaaatta----gtattggtgtcgacgtgtcaatgtcgtgt 17930445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 27732245 - 27732289
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||||    
T  27732245 cgacacatataattacactgaattatgtaattttcttaaattatt 27732289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 27980841 - 27980805
Alignment:
Q  96 ataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||| | ||||||||    
T  27980841 ataattacattgaattatgtcattttttaaaattatt 27980805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 30606070 - 30606114
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||  |||||||||||||||||||||| | ||||||||    
T  30606070 cgacacatatggttacattgaattatgtcattttttgaaattatt 30606114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 43250046 - 43250002
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||| || ||||||||||||| ||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattatt 43250002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 41319316 - 41319388
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgtc 164  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    ||||||||||||||||||| |||||||||    
T  41319316 cgacacatacaattacattgaattatgtcattttttcaaattat----tattggtgtcgacgtgtccgtgtcgtgtc 41319388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 16192737 - 16192800
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||||| ||||| ||||||||||    
T  16192737 tctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatt 16192800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 8039825 - 8039885
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||| ||||||||||||||||| |||||||| | ||||| ||||||||||    
T  8039825 gacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattatt 8039885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 8930829 - 8930880
Alignment:
Q  81 acgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||||| ||||||||| ||||| | ||||||||    
T  8930829 acgacatcgacacatataattacatcgaattatgtgattttttaaaattatt 8930880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 11666012 - 11665953
Alignment:
Q  73 acatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||| ||||||||||||||||| | |||| ||| ||||||||||||||||    
T  11666012 acatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattatt 11665953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 7928509 - 7928459
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattatt 7928459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 11093640 - 11093579
Alignment:
Q  71 tgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||||||||| | |||||| | ||||| ||||||||||||||||| ||||||||||    
T  11093640 tgacattgacacgacaccaacacatctgattactttgaattatgtcattttttcaaattatt 11093579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 20691377 - 20691328
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||| |||||| |||||||||||||||| ||||||||||    
T  20691377 gacaccgacacatatgattacactgaattatgtcattttctcaaattatt 20691328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 40150572 - 40150621
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||| ||||||||||||||| ||||||| ||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatt 40150621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 9210823 - 9210875
Alignment:
Q  80 cacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||| | ||| ||||||||||||||||||| ||||||||||    
T  9210823 cacgacattgacacatgtgattccattgaattatgtcattttctcaaattatt 9210875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 12704663 - 12704707
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||    
T  12704663 cgacacctatgattacattgaattatgtcattttttcaaattatt 12704707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 29508501 - 29508453
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  29508501 acatcgacacatataattacactgaattatatgattttttcaaattatt 29508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 9624689 - 9624650
Alignment:
Q  93 catataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattatt 9624650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 17005606 - 17005669
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| | |||| ||| |||||| |||||||||| |||||||| | ||||||||||||||||    
T  17005606 tctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattatt 17005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Complemental strand, 35222997 - 35222958
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  35222997 cgacaccgacacatataattacattgaattatgtgatttt 35222958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 51512189 - 51512232
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  51512189 cgacacatatgattccattgaattatgtgattttatcaaattat 51512232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 1389879 - 1389821
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcg 146  Q
    |||||| ||| ||| ||| ||||||||| |||||||||||||||| | |||||||||||    
T  1389879 cgacacgtatgattccatagaattatgtgattttatcaaattatttattattggtgtcg 1389821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 39002094 - 39002044
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    ||||||||  |||| |||||||||||||||||||||| ||||| |||||||    
T  39002094 acacgacactgacatatataattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 8789550 - 8789599
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||| |||||||||||||||||  ||||||||| ||||| |||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 44427904 - 44427855
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaa 127  Q
    ||||||||| |||||||| | ||||||||| ||||||||||||| |||||    
T  44427904 gacacgacaccgacacatgtgattacattggattatgtcattttctcaaa 44427855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 7949011 - 7948979
Alignment:
Q  89 gacacatataattacattgaattatgtcatttt 121  Q
    |||||||| ||||||||||||||||||||||||    
T  7949011 gacacatacaattacattgaattatgtcatttt 7948979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 9789171 - 9789127
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||| |||||| | ||||||| ||||||||    
T  9789171 cgacacatataattacattaaattatattattttataaaattatt 9789127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 20503518 - 20503474
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| | |||||||| |||||||||||||||| ||||||||||    
T  20503518 cgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 21161501 - 21161549
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| || ||| | ||||| ||||||||||    
T  21161501 acatcgacacatataattacattcaactatattattttttcaaattatt 21161549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 21478734 - 21478669
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtc 159  Q
    |||||||| |||||||||| ||||||||| || | ||||||||    |||||||||||| ||||||||||    
T  21478734 acacatatgattacattgatttatgtcatcttgtgaaattatt----attggtgtcgacatgtccatgtc 21478669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 24205047 - 24205091
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||| || ||||||||||||| ||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattatt 24205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 24633407 - 24633451
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  24633407 cgacacatataattacattgaattacgtgatttttccaaattatt 24633451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 27513657 - 27513701
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||| |||| |||||||||| |||||||||||| ||||||||||    
T  27513657 cgacaagacaccgacacatatgattacattgaataatgtcatttt 27513701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 52369828 - 52369784
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||||||| ||||| ||||||||||    
T  52369828 cgacacctatgattacattgaattatgtaattttctcaaattatt 52369784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 5e-18; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 28296388 - 28296281
Alignment:
Q  81 acgacatcgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtttga 180  Q
    |||||| | |||||||| | ||||||||||||||||||||| |||||||||    ||| ||||||||| |||||||||||||||  ||||| ||||||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattat----tatcggtgtcgacttgtccatgtcgtgtcttgtgtctgtgtttga 28296293  T
Q  181 gcatgtgcttca 192  Q
    |  |||||||||    
T  28296292 gtttgtgcttca 28296281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 41091247 - 41091303
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaat 128  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  41091247 gacattgacacgacatcgacacatataattacactgaattatgtgattttctcaaat 41091303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 31084387 - 31084332
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||    
T  31084387 cgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattatt 31084332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 38749558 - 38749613
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  38749558 cgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatt 38749613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 22423802 - 22423862
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||| ||||| ||||||||| |||||||||||| ||||| ||||||||||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattatt 22423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 41558649 - 41558701
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||| |||||||    
T  41558649 cgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 3966566 - 3966512
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattatt 3966512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 6471886 - 6471939
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| | ||||||||||||||| |||||||||| ||||| ||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattatt 6471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 18592142 - 18592093
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    |||| |||||||||| || ||||||||||||||||||||||||| |||||    
T  18592142 gacaccgacacgacaccggcacatataattacattgaattatgtaatttt 18592093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 32444835 - 32444778
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    ||||| ||||||||| |||||||| | |||||||||||||||||||| || |||||||    
T  32444835 gacattgacacgacaccgacacatttgattacattgaattatgtcatcttctcaaatt 32444778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 36838605 - 36838552
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattatt 36838552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 5467984 - 5468028
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatt 5468028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 12264812 - 12264875
Alignment:
Q  65 cgtatctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaat 128  Q
    ||||||||||| ||| | ||||| |||||||||||||||| ||||| |||| ||||| ||||||    
T  12264812 cgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaat 12264875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 32630742 - 32630785
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||    
T  32630742 gacacatataattacattgaattatataattttctcaaattatt 32630785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 40212024 - 40211965
Alignment:
Q  73 acatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||| ||| |||||| |||| |||||||||||| ||||| |||| |||||    
T  40212024 acatcgacacgacaccgatacatatgattatattgaattatgtaattttctcaatttatt 40211965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 8420086 - 8420036
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||| | ||||||||||||||||||| ||||| ||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattatt 8420036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 17925172 - 17925222
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||||| ||||||||||||||||| ||||| | ||||||||    
T  17925172 cgacaccgacacatattattacattgaattatgtgattttcttaaattatt 17925222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 21576745 - 21576795
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||| | |||||||| |||||||||| ||||| ||||||||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattatt 21576795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 23287356 - 23287415
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgt 152  Q
    |||||||||||||| ||||||||||||||||||   |||||||    |||||||||||||||||    
T  23287356 gacacatataattatattgaattatgtcattttcctaaattat----tattggtgtcgacgtgt 23287415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 30502388 - 30502438
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| ||||||| || ||||| ||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattatt 30502438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 30542731 - 30542781
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| ||||||| || ||||| ||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattatt 30542781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 4991372 - 4991424
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||||||||| |||||||| ||||||||| || |||||||||||| ||||||||    
T  4991372 cgacacgacaccgacacatctaattacat-gatttatgtcattttctcaaatta 4991424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 121
Target Start/End: Complemental strand, 5399968 - 5399939
Alignment:
Q  92 acatataattacattgaattatgtcatttt 121  Q
    ||||||||||||||||||||||||||||||    
T  5399968 acatataattacattgaattatgtcatttt 5399939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 11596472 - 11596505
Alignment:
Q  99 attacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  11596472 attacattgaattatgtcattttctcaaattatt 11596505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 16199282 - 16199335
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||  ||| | |||| |||||||||||||||||| ||||||||||    
T  16199282 acacgacatcgatgcatgtgattaaattgaattatgtcattttgtcaaattatt 16199335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 30098372 - 30098335
Alignment:
Q  95 tataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattatt 30098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 43208281 - 43208322
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||| |||| ||||||||||||||||||||||| ||||||||    
T  43208281 gacagatatgattacattgaattatgtcattttctcaaatta 43208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 5616214 - 5616262
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| || ||| | ||||| ||||||||||    
T  5616214 acatcgacacatataattacattcaactatattattttttcaaattatt 5616262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 16881185 - 16881145
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||| |||||||||||||| ||||||||||    
T  16881185 acatatgattacattaaattatgtcattttttcaaattatt 16881145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 18607103 - 18607147
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||||||| ||||| ||||||||||    
T  18607103 cgacacctatgattacattgaattatgttattttctcaaattatt 18607147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 19552532 - 19552593
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| ||||||||||||||||| ||||  |||| | |||||||| ||||| ||||||||||    
T  19552532 tctgacaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattatt 19552593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 19737488 - 19737532
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| ||| ||||||||||||| ||||| ||||||||||    
T  19737488 cgacacatatgattgcattgaattatgtaattttctcaaattatt 19737532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 23012414 - 23012458
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||| |||||| | ||||| ||||||||||    
T  23012414 cgacacatataattacattaaattatatgattttctcaaattatt 23012458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 24906307 - 24906351
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| | |||||||| |||||||||||||||| ||||||||||    
T  24906307 cgacacttgtaattacactgaattatgtcattttttcaaattatt 24906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 31264491 - 31264447
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattatt 31264447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 32766933 - 32766993
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||   |||||||||||||||||||||| ||  ||||| ||||||||||    
T  32766933 gacaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattatt 32766993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 11927083 - 11927136
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatt 11927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 11944735 - 11944674
Alignment:
Q  71 tgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| |||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||    
T  11944735 tgacatcaacacgacaccgacacatataattacactgagttatgtgattttatcaaattatt 11944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 25172688 - 25172748
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||    
T  25172688 gacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattatt 25172748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 34897144 - 34897094
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattatt 34897094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 24362192 - 24362252
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||| |||||||||||||||| |||||||||| ||| | ||||||||||    
T  24362192 gacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattatt 24362252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 31236583 - 31236627
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattatt 31236627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 34201056 - 34201096
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatt 34201096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 31548289 - 31548339
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaat 128  Q
    |||| |||| |||||||| | ||||||||||||||||||||||||||||||    
T  31548289 gacatgacaccgacacatgtgattacattgaattatgtcattttatcaaat 31548339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 4122238 - 4122299
Alignment:
Q  71 tgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||||| ||| ||||||||||||||||| |||||||| | |||||||| |||||||    
T  4122238 tgacattgacacaacaccgacacatataattacaatgaattatataattttatctaattatt 4122299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 4786338 - 4786428
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgt 176  Q
    ||||| ||||||||||||||||| |||||||||| ||||| | |||||||    || |||||||| ||||||  |||||||| ||||||| ||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattat----taatggtgtcggcgtgtcagtgtcgtgttcggtgtcagtgt 4786428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 12606830 - 12606879
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||||||||||||||||||| | ||||| ||||||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattatt 12606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 29198480 - 29198529
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||| ||||| ||||||||||||||||||||||| ||||||||||    
T  29198480 gacattgacgcatatgattacattgaattatgtcattttctcaaattatt 29198529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 22652045 - 22651985
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||| |||||| | |||||| |||||||||||| ||||| ||||||||||    
T  22652045 gacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattatt 22651985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 8798838 - 8798881
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||    
T  8798838 gacacatataattatattgaattatgttattttctcaaattatt 8798881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 14134757 - 14134684
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcg 160  Q
    |||| ||||| ||||||||||| |||||||||| ||||| |||||||||| |||||   ||||||||||||| |||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattatt-agtat---tgtcgacgtgtccgtgtcg 14134684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 3508103 - 3508061
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||    
T  3508103 acacatatgattacattgaattatgttattttctcaaattatt 3508061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 5307123 - 5307070
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| |||||| ||| ||| ||||||||||||||||||| ||||||||||    
T  5307123 gacacgacaccgacacttatgatttcattgaattatgtcatttt-tcaaattatt 5307070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 12985451 - 12985401
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  12985451 cgacaccgacatatatgattacattgaattatgtgattttctcaaattatt 12985401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 13844596 - 13844646
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattatt 13844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 22771013 - 22770971
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  22771013 acacatatgattacattgaattatgttgttttatcaaattatt 22770971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 37225753 - 37225820
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgt 163  Q
    |||||| ||||||||||||||||| ||||| |||||||||    ||||||||| ||| |||| |||||||||    
T  37225753 acatatgattacattgaattatgttattttctcaaattat----tattggtgtagacatgtctatgtcgtgt 37225820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 18964230 - 18964197
Alignment:
Q  88 cgacacatataattacattgaattatgtcatttt 121  Q
    |||||||||||||||||||||||||||| |||||    
T  18964230 cgacacatataattacattgaattatgtgatttt 18964197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 33382020 - 33382069
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||||||    
T  33382020 gacaccgacacatataattactctgaattatgtcattttcttaaattatt 33382069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 1639547 - 1639499
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||  | ||||||||||||||||||||||| ||||| ||||    
T  1639547 acatcgacacacgttattacattgaattatgtcattttctcaaaatatt 1639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 4611583 - 4611543
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||| |||||||||| ||||| ||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattatt 4611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 7658516 - 7658472
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||| |||||||||| ||||| ||||||||||    
T  7658516 cgacaaatataattacactgaattatgtaattttctcaaattatt 7658472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 10441245 - 10441213
Alignment:
Q  99 attacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||||||||||||||| |||||||||    
T  10441245 attacattgaattatgtcattttctcaaattat 10441213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 26902174 - 26902214
Alignment:
Q  81 acgacatcgacacatataattacattgaattatgtcatttt 121  Q
    |||||| ||||||||||||||||| |||||||||| |||||    
T  26902174 acgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 27213600 - 27213556
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||||    
T  27213600 cgacacatataattacagtgaattatgtgattttctgaaattatt 27213556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 28745567 - 28745507
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||||||||  | || |||||||||||||||| | ||| ||||||||||    
T  28745567 gacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattatt 28745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 29447100 - 29447160
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||| |||| |||||| | || |||||||||||||||| ||||| ||||||||||    
T  29447100 gacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 29447160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 34223000 - 34222956
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| | |||||||| ||||||| ||||||||    
T  34223000 cgacacatataattacacttaattatgtgattttattaaattatt 34222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 44067569 - 44067525
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||| || ||||||||||||| ||||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattatt 44067525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 8931588 - 8931649
Alignment:
Q  68 atctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||| ||||| |||||||    
T  8931588 atctgacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatt 8931649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 26562758 - 26562701
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  26562758 gacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 9617494 - 9617443
Alignment:
Q  81 acgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 9629442 - 9629391
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattattg 133  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattg 9629391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 32320664 - 32320719
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  32320664 cgacacgacaccgatacatataatgacattgaattatgtgattttatcaaattatt 32320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 9024171 - 9024225
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||    
T  9024171 cgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 9025490 - 9025544
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattatt 9025544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 9195751 - 9195804
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatt 9195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 30866150 - 30866194
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattatt 30866194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 7378038 - 7377991
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatt 7377991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 7265593 - 7265643
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattatt 7265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 17168945 - 17168903
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  17168945 acacatatagttacattgaattatgtcattttttcaaattatt 17168903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 28862184 - 28862130
Alignment:
Q  79 acacgacatcgacacatataattacattgaatta-tgtcattttatcaaattatt 132  Q
    |||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||    
T  28862184 acacgacaccgacacatatgattacactgaattaatgtcattttatcaaattatt 28862130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 33001289 - 33001339
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||||| |||||||| ||||| ||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattatt 33001339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 1532290 - 1532249
Alignment:
Q  91 cacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattatt 1532249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 12690475 - 12690442
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgt 115  Q
    ||||||||||||||||||||||||||||||||||    
T  12690475 cgacatcgacacatataattacattgaattatgt 12690442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 13851794 - 13851745
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||| ||||||| || ||||| ||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattatt 13851745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 8714049 - 8713948
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttat-caaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgt 170  Q
    |||| |||||||||| | |||  | |||||||| |||||||||| ||||| | ||||||||| | |    ||||||||||||||||||| ||||||||||    
T  8714049 gacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaact----gtgtcgacgtgtccatgtcatgtccggtgt 8713954  T
Q  171 ccgtgt 176  Q
    ||||||    
T  8713953 ccgtgt 8713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 15443764 - 15443704
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||| ||| | ||| ||||||||| |||||||||||| ||||| ||||||||||    
T  15443764 gacatcgacacaacaccaacatatataattatattgaattatgttattttctcaaattatt 15443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 34073337 - 34073397
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||| |||| |||||||||||| |||||||||  ||||| ||||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattatt 34073397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 2117139 - 2117085
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| |||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  2117139 cgacacgaca-cgacacttataattgcattgaattatgtgattttttcaaattatt 2117085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 5462758 - 5462695
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||| || |||||| ||| ||||||||||| |||||||||| ||||| ||||||||||    
T  5462758 tctgatatcggcatgacatcaacatatataattacaatgaattatgtgattttctcaaattatt 5462695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 17341671 - 17341714
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatt 17341714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 19040404 - 19040361
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattatt 19040361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 19369882 - 19369831
Alignment:
Q  76 tcgacacgacatcgacacatataattacattgaattatgtcattttatcaaa 127  Q
    ||||||||||| |||||| | | ||||||||||||||||||||||| |||||    
T  19369882 tcgacacgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 32313476 - 32313413
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| |||||||||| | |||||||||||| |||||||| |||| ||||| |||| |||||    
T  32313476 tctgacaccgacacgacacccacacatataattgcattgaatcatgttattttctcaacttatt 32313413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 7086858 - 7086804
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||| ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattatt 7086804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 9027241 - 9027187
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| |||||||||||||||||  ||||||||| ||| | ||||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattatt 9027187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 10158037 - 10157995
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||||||| | ||||||||||||||||||||||| ||||||||    
T  10158037 cgacacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 11591875 - 11591917
Alignment:
Q  87 tcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    |||||||||||||||||| |||||||||| ||||| |||||||    
T  11591875 tcgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 12627577 - 12627627
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||| |||||| |||||||||| ||||| ||| ||||||    
T  12627577 cgacatcgacacatattattacactgaattatgtgattttttcacattatt 12627627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 20371110 - 20371160
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattatt 20371160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 20576621 - 20576683
Alignment:
Q  70 ctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| | |||| |||||||||| |||||||||  ||||| || |||||||    
T  20576621 ctgacatcgacacgacaccaacacttataattacactgaattatgcaattttctcgaattatt 20576683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 28715354 - 28715304
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||| | |||||||| |||||||||||||||| ||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 28715304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 33419224 - 33419182
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||    
T  33419224 acacatataattacattgaattatatcaatttttcaaattatt 33419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 2140494 - 2140531
Alignment:
Q  95 tataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  2140494 tatagttacattgaattatgtcattttctcaaattatt 2140531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 4864114 - 4864073
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  4864114 acacatataattaaattaaattatgtcattttttcaaattat 4864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 7112830 - 7112789
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  7112830 gacacatataattacatttaattatttcattttctcaaatta 7112789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 8781315 - 8781356
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaatta 130  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  8781315 gacacatataattacatttaattatttcattttctcaaatta 8781356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 10294169 - 10294116
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| |||||||||||||||||||||| ||||  ||| | ||||||||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattatt 10294116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 31579239 - 31579311
Alignment:
Q  96 ataattacattgaattatgtcattttatcaaattattga--gtattggtgtcgacgtgtccatgtcgtgtccg 166  Q
    ||||||||| |||||||||| ||||| |||||||||| |  || ||||||| |  ||||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 6299565 - 6299521
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||    
T  6299565 cgacacctatcattacattgaattatatcattttctcaaattatt 6299521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 6306375 - 6306331
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||    
T  6306375 cgacacctatcattacattgaattatatcattttctcaaattatt 6306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 7151473 - 7151421
Alignment:
Q  80 cacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| | ||||||||||||||| | |||||||| ||||| ||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatt 7151421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 13815171 - 13815211
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||| |||||||||||||||| ||||||||    
T  13815171 acatattattacattcaattatgtcattttatgaaattatt 13815211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 18367828 - 18367800
Alignment:
Q  148 cgtgtccatgtcgtgtccggtgtccgtgt 176  Q
    |||||||||||||||||||||||||||||    
T  18367828 cgtgtccatgtcgtgtccggtgtccgtgt 18367800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 18367908 - 18367856
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||||| |||||||||| ||||||||||||||||| || ||| ||| |||||    
T  18367908 tctgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 18367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 26178687 - 26178731
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| |||||| | |||||||| ||||||||||||||||    
T  26178687 cgacacatatgattacactaaattatgtgattttatcaaattatt 26178731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 26314640 - 26314684
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||||||||||||||| | ||||| ||||||||||    
T  26314640 cgacatatataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 32299328 - 32299284
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||||| ||||||||||||||| ||||| ||||||||||    
T  32299328 cgacacgtataactacattgaattatgtgattttctcaaattatt 32299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 34446618 - 34446574
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||||    
T  34446618 cgacacctatgattacactgaattatgtcattttctcaaattatt 34446574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 56049934 - 56049841
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtttgag 181  Q
    |||| |||||||||| ||||||||||| ||||||||||  ||||||||||    || |||||||| |||||| ||||||||||||||||||||| ||||    
T  56049934 gacaccgacacatatgattacattgaactatgtcatttc-tcaaattatt----atcggtgtcgatgtgtccgtgtcgtgtccggtgtccgtgtctgag 56049841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 11110260 - 11110211
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattattg 133  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  11110260 acatcgacacatatgattacatcgaattatgtcattttctcaaattattg 11110211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 40742668 - 40742600
Alignment:
Q  64 acgtatctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||| |||||||||||||||||||||||||||| |  ||||| | ||||| ||||||||||    
T  40742668 acgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatt 40742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 13134515 - 13134460
Alignment:
Q  76 tcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||    
T  13134515 tcgacacgacatcgacacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 18513248 - 18513291
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  18513248 gacacatatgattacattgaattatgtcattttctcaaattatt 18513291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 35952612 - 35952667
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||  || |||||||||||||||||||||| | ||||||||||||||||    
T  35952612 cgacacgacactgatacatataattacattgaattatatgattttatcaaattatt 35952667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 5654589 - 5654641
Alignment:
Q  82 cgacatcgacaca--tataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||  ||| ||||||||||||||||||||||| ||||||||||    
T  5654589 cgacatcgacacacgtatgattacattgaattatgtcattttctcaaattatt 5654641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 32915592 - 32915645
Alignment:
Q  69 tctgacatcgacacgacatc-gacacatataattacattgaattatgtcatttt 121  Q
    |||||||||||||||||| | || |||||||||||||||||||||||| |||||    
T  32915592 tctgacatcgacacgacaaccgaaacatataattacattgaattatgtgatttt 32915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 5225610 - 5225662
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    |||||||| |||||||||| ||| ||||||||||||||||| | |||||||||    
T  5225610 acacgacaccgacacatattattgcattgaattatgtcattatctcaaattat 5225662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 14465300 - 14465344
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| |||| |||||||||||||||||| ||||||||||    
T  14465300 cgacacatatgattaaattgaattatgtcattttctcaaattatt 14465344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 19230315 - 19230359
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||    
T  19230315 cgacacctataattacattgaattatgttattttctcaaattatt 19230359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 28158065 - 28158017
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||||||||||||||||| ||| |||||||||| ||||||||||    
T  28158065 acattgacacatataattacattaaatcatgtcattttttcaaattatt 28158017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 5775353 - 5775408
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||| ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattatt 5775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 12895111 - 12895166
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| |||||| | ||||||| ||||||||||| ||||| ||||||||||    
T  12895111 cgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattatt 12895166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 24613688 - 24613751
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| ||||| |||| |||||| | || |||||||||||||||| ||||| ||||||||||    
T  24613688 tctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattatt 24613751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 131
Target Start/End: Original strand, 26276023 - 26276058
Alignment:
Q  96 ataattacattgaattatgtcattttatcaaattat 131  Q
    |||||||||||||||||||||||||| |||||||||    
T  26276023 ataattacattgaattatgtcattttctcaaattat 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 40774333 - 40774290
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||    
T  40774333 gacacatataattacattgaattatctgattttataaaattatt 40774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 113
Target Start/End: Original strand, 16066566 - 16066596
Alignment:
Q  83 gacatcgacacatataattacattgaattat 113  Q
    |||||||||||||||||||||||||||||||    
T  16066566 gacatcgacacatataattacattgaattat 16066596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 21945562 - 21945512
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||| | |||||||| |||||||||||||||| ||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 21945512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 31602995 - 31603045
Alignment:
Q  71 tgacatcgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||| |||||    
T  31602995 tgacaccgacacgacttcgaaacatatgattacattgaattatgtgatttt 31603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 36635375 - 36635333
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattatt 36635333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 44796971 - 44797013
Alignment:
Q  91 cacatataattacattgaattatgtcattttatcaaattattg 133  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||    
T  44796971 cacatgtaattacattgaattatgttattttctcaaattattg 44797013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 7214523 - 7214572
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||| |||||||||||||| |||||||| ||||| ||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattatt 7214572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 10546190 - 10546157
Alignment:
Q  99 attacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  10546190 attacattgaattatgtcattttctcaaattatt 10546157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 12708216 - 12708167
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||| |||||||||||||||| | |||||||| |||||||| |||||||    
T  12708216 gacatagacacgacatcgacacttgtaattacactgaattatttcatttt 12708167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 13484023 - 13483994
Alignment:
Q  149 gtgtccatgtcgtgtccggtgtccgtgttt 178  Q
    ||||||||||||||||||||||||||||||    
T  13484023 gtgtccatgtcgtgtccggtgtccgtgttt 13483994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 22440609 - 22440650
Alignment:
Q  91 cacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||| |||||||||| ||||| ||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattatt 22440650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 35723374 - 35723435
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgt-cattttatcaaattatt 132  Q
    |||| ||| ||||||  |||||||||||||||||||||||||||  ||||| ||||||||||    
T  35723374 gacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattatt 35723435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 903971 - 903931
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||| |||||||||| ||||| ||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatt 903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 8820461 - 8820417
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| | | ||||||||||||| ||||||||||||||||    
T  8820461 cgacacatatgactccattgaattatgtgattttatcaaattatt 8820417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 20743265 - 20743328
Alignment:
Q  69 tctgacatcgacac-gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||| |||| | |||| ||| |||||| |||||||||||||||| ||||||||||    
T  20743265 tctgacatcgacaccgaca-caacacctatgattacactgaattatgtcattttctcaaattatt 20743328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 32910596 - 32910560
Alignment:
Q  96 ataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  32910596 ataattacactgaattatgtcattttctcaaattatt 32910560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 40613503 - 40613459
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  40613503 cgacacatataattacactgaattatgtgattttctcaaaatatt 40613459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 43300669 - 43300625
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  43300669 cgacaaatatgattacattgaattatgtaattttctcaaattatt 43300625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 46160960 - 46160916
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    |||||||||| ||||||||||||| ||| |||||||||| |||||    
T  46160960 cgacacgacaccgacacatataataacactgaattatgttatttt 46160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 12668418 - 12668473
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||    
T  12668418 cgacacgacaccgacacttataattacactgaattatgtcattttttcaaattatt 12668473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 30717520 - 30717580
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| ||||||||||||||||| | |||||||| |||||||||| ||||| ||||||||||    
T  30717520 gacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattatt 30717580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 4882683 - 4882742
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaat 128  Q
    ||||||| ||||||||||||||||| | |||||||| |||||||| ||||||| ||||||    
T  4882683 tctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaat 4882742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 18571024 - 18570981
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  18571024 gacacatatgattacattgaattatgtcattttctcaaattatt 18570981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 34691805 - 34691855
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| |||||||| | ||||||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattatt 34691855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 34714217 - 34714267
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| |||||||| | ||||||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattatt 34714267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 37411244 - 37411294
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattatt 37411294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 40682044 - 40681991
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||| |  |||||||||||||||||||||||| ||||||||||    
T  40682044 acacgacattgacacgtgcaattacattgaattatgtcattttctcaaattatt 40681991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 44860382 - 44860329
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||| |||||||||  ||||| ||||||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattatt 44860329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 18420424 - 18420484
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||| ||| |||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  18420424 gacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattatt 18420484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 27286282 - 27286342
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| ||||| ||||| |||||||||| | |||||||| || |||||||||||||    
T  27286282 gacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattatt 27286342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 42205841 - 42205930
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtttgag 181  Q
    |||||||||| ||||  || ||||| |||||||| ||||||||||    |||||||| | | |||| ||||||||||||||||| |||||||||    
T  42205841 cgacacatatgattattttcaattaagtcattttctcaaattatt----attggtgttggcatgtcaatgtcgtgtccggtgtctgtgtttgag 42205930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 44605145 - 44605189
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||    
T  44605145 cgacacatgtaattacattgaattatgttattttctcaaattatt 44605189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 45000845 - 45000893
Alignment:
Q  81 acgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    |||||| |||||||||| ||||||||||||| ||||||||| |||||||    
T  45000845 acgacaccgacacatatgattacattgaattgtgtcattttctcaaatt 45000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 28341865 - 28341908
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||    
T  28341865 gacacgacaccgacatctataattacattgaattatgtcatttt 28341908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 5367251 - 5367201
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| |||||||||| ||||  ||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatt 5367201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 19613621 - 19613663
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||    
T  19613621 acacatatcattacattgaattatgttattttctcaaattatt 19613663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 21616813 - 21616771
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattatt 21616771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 28121557 - 28121599
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||    
T  28121557 acacatataattacattgatttatgccattttctcaaattatt 28121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 29970545 - 29970599
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||| |||||| |||| ||||  ||||| ||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattatt 29970599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 30563460 - 30563418
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||| |||| |||||||||||||||||||||| ||||||||||    
T  30563460 acacctatagttacattgaattatgtcattttctcaaattatt 30563418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 31026754 - 31026704
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||| |||| ||||||||||||||||||||||| | ||||||||    
T  31026754 cgacaccgacatatatgattacattgaattatgtcattttcttaaattatt 31026704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 35056937 - 35056896
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattat 113  Q
    |||| |||||||||| ||||||||||||||||| ||||||||    
T  35056937 gacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 4229410 - 4229458
Alignment:
Q  84 acatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||| |||||| |||||||||||||| | | ||||||||    
T  4229410 acatcgacacatatgattacactgaattatgtcattctcttaaattatt 4229458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 10535765 - 10535809
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattatt 10535809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 23718079 - 23718035
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||| | ||| ||||||||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattatt 23718035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 24105751 - 24105707
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||| | ||| ||||||||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattatt 24105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 28412395 - 28412359
Alignment:
Q  96 ataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattatt 28412359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 28677958 - 28677918
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||| |||||||||| ||||| ||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattatt 28677918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 30471091 - 30471047
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||| ||||||||| ||||| ||||| ||||    
T  30471091 cgacacatataattacatcgaattatgtgattttctcaaaatatt 30471047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 34784977 - 34785021
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    |||||||||| ||||||||||||||||| | |||||||| |||||    
T  34784977 cgacacgacaccgacacatataattacactaaattatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 37402091 - 37402123
Alignment:
Q  89 gacacatataattacattgaattatgtcatttt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  37402091 gacacatatgattacattgaattatgtcatttt 37402123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 9828116 - 9828053
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||  ||||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||    
T  9828116 tctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatt 9828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 44482299 - 44482240
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    |||| |||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||    
T  44482299 gacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 6427413 - 6427359
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattatt 6427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 17425101 - 17425143
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattatt 17425143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 2445928 - 2445880
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  2445928 gacatcgacacatatgattaaattgaattatgtcattttctcaaattat 2445880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 6612161 - 6612221
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||| |||||| | |||||||| |||||||||| ||||| ||||||||||    
T  6612161 gacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatt 6612221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 9629890 - 9629950
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||| |||||| |||||| ||| |||||||| | ||||||||||||||||    
T  9629890 gacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattatt 9629950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 25361955 - 25361896
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattat 131  Q
    |||| ||||||||||  |||||||||||||||| |||||||||| ||||| |||||||||    
T  25361955 gacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 30847727 - 30847770
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  30847727 gacacatatgattacattgaattatgtcattttttcaaattatt 30847770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 40747780 - 40747823
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
T  40747780 gacacctataattacattgaattatgtcattttctcaaattatt 40747823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 7918207 - 7918261
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||  |||||||||||||||| |||||||||| ||||| ||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattatt 7918261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 16164312 - 16164365
Alignment:
Q  79 acacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||  |||||||||||||||||| |||||||| ||||| ||||||||||    
T  16164312 acacgacaatgacacatataattacattaaattatgtgattttttcaaattatt 16164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 34371789 - 34371728
Alignment:
Q  65 cgtatctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaa 126  Q
    |||||| |||| | |||||||| ||||||||||||||||| |||||||||| ||||| ||||    
T  34371789 cgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 1864886 - 1864930
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  1864886 cgacacatataattacactgaattatgtgattttctcaaattatt 1864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 5376490 - 5376550
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||| |||||| | |||||||| |||||||||| ||||| | ||||||||    
T  5376490 gacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattatt 5376550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 5944350 - 5944303
Alignment:
Q  74 catcgacacgacatcgacacatataattacattgaattatgtcatttt 121  Q
    ||||||||||||| |||||| |||||||||| |||||||||| |||||    
T  5944350 catcgacacgacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 23804480 - 23804437
Alignment:
Q  89 gacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||| |||||| | ||||||||||||||||    
T  23804480 gacacatataattacattaaattatataattttatcaaattatt 23804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 34712378 - 34712433
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||  |||||||||||||||| | |||||||| ||||| ||||||||||    
T  34712378 cgacacgacactgacacatataattacactaaattatgttattttctcaaattatt 34712433  T

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Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 40285649 - 40285704
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||| | |||| |||||||||  ||||| ||||||||||    
T  40285649 cgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattatt 40285704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 9709879 - 9709829
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||||||||||||  ||||||||| ||||| ||||||||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattatt 9709829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 19637827 - 19637777
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||||||| |||||||||||| |||||||||| | ||||||||    
T  19637827 cgacaccgacacatatgattacattgaataatgtcattttcttaaattatt 19637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 38078661 - 38078711
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| |||||| | ||||||||||||||||||| ||||| ||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattatt 38078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 40181930 - 40181880
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||| ||||||||||||| |||||||||| ||||| ||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattatt 40181880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 41017416 - 41017454
Alignment:
Q  94 atataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  41017416 atataattacattaaattatgtcattttctcaaattatt 41017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 52903308 - 52903258
Alignment:
Q  82 cgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||||||||||||||||| |||||||| | ||||||| ||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattatt 52903258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 3921709 - 3921676
Alignment:
Q  99 attacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  3921709 attacattgaattatgtcattttctcaaattatt 3921676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 10475031 - 10475068
Alignment:
Q  140 ggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtt 177  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  10475031 ggtgtcggcgtgtcaatgtcgtgtccggtgtccgtgtt 10475068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 11571627 - 11571594
Alignment:
Q  99 attacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  11571627 attacattgaattatgtcattttctcaaattatt 11571594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 18190109 - 18190158
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||| | |||||||| |||||||||| ||||| ||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattatt 18190158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 25098563 - 25098604
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattat 131  Q
    ||||||||||||||| |||||||||| ||||| |||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 351094 - 351134
Alignment:
Q  92 acatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||| ||||||||||||| ||||||||||||||||    
T  351094 acatatgattccattgaattatgtgattttatcaaattatt 351134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 498403 - 498446
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||    
T  498403 cgacaaatgtaattacattgaattatgtcatttt-tcaaattatt 498446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  91 cacatataattacattgaattatgtcattttatcaaattat 131  Q
    |||||||||||||| |||||||||| ||||| |||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 22794084 - 22794128
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||| || ||||||||||||| ||||||||||    
T  22794084 cgacacctataattacactgtattatgtcattttttcaaattatt 22794128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 40996536 - 40996508
Alignment:
Q  104 attgaattatgtcattttatcaaattatt 132  Q
    |||||||||||||||||||||||||||||    
T  40996536 attgaattatgtcattttatcaaattatt 40996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 99962 - 99875
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgt 163  Q
    ||||| ||||||||| | |||||||||||||||||||||||||| ||||| | |||||||    ||| ||||||||| ||||| ||||||||    
T  99962 gacattgacacgacaccaacacatataattacattgaattatgttattttctaaaattat----tatcggtgtcgacatgtccgtgtcgtgt 99875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 90901 - 90852
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||||||| ||||||||||| |||||||| | ||||| ||||||||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattatt 90852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 6372 - 6321
Alignment:
Q  81 acgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||||||||||    
T  6372 acgacaccgacacatataattacattgaattatgcaattttgtcaaattatt 6321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 9734 - 9797
Alignment:
Q  69 tctgacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||| | |||||||| ||||||||||||||||| ||||||| || ||||| ||||||||||    
T  9734 tctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattatt 9797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 135308 - 135362
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||| |||||||||||||||||  ||||||||| ||||| ||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattatt 135362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 53249 - 53188
Alignment:
Q  72 gacatcgacacgacatcgacacatataattacattgaattatgtcattttatcaaattattg 133  Q
    |||| ||||||| || |||||| |||||||||| |||||||||| ||||| |||||||||||    
T  53249 gacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattg 53188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 240022 - 240116
Alignment:
Q  83 gacatcgacacatataattacattgaattatgtcattttatcaaattattgagtattggtgtcgacgtgtccatgtcgtgtccggtgtccgtgtttgag 181  Q
    |||| |||||||||| ||||||||||||||| | ||||| ||||||||||    || | |||| || ||||| |||| |||||||||||||||| ||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattatt----atagttgtcaacatgtccgtgtcatgtccggtgtccgtgtctgag 240116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 44520 - 44572
Alignment:
Q  77 cgacacgacatcgacacatataattacattgaattatgtcattttatcaaatt 129  Q
    |||||||| | ||||||||||||||||| |||||||||| ||||| |||||||    
T  44520 cgacacgataccgacacatataattacactgaattatgtgattttctcaaatt 44572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 225274 - 225318
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattatt 225318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 101052 - 101020
Alignment:
Q  89 gacacatataattacattgaattatgtcatttt 121  Q
    |||||||||||||||||||||||||||||||||    
T  101052 gacacatataattacattgaattatgtcatttt 101020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 101127 - 101098
Alignment:
Q  90 acacatataattacattgaattatgtcatt 119  Q
    ||||||||||||||||||||||||||||||    
T  101127 acacatataattacattgaattatgtcatt 101098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 17044 - 17086
Alignment:
Q  90 acacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||    
T  17044 acacatataattacattgatttatgccattttctcaaattatt 17086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 28913 - 28859
Alignment:
Q  78 gacacgacatcgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||| ||| |||||||||||||||||||||||||||  ||||| | ||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattatt 28859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 26446 - 26402
Alignment:
Q  88 cgacacatataattacattgaattatgtcattttatcaaattatt 132  Q
    ||||||||||||  |||||||||||||| ||||| ||||||||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattatt 26402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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