View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7009_high_18 (Length: 248)
Name: NF7009_high_18
Description: NF7009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7009_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 38298786 - 38299017
Alignment:
| Q |
1 |
ccattccactccattgacaattgctaaaccttctcctatcatggttactatcgaaggccttgttttaggctttgcataaaaaccaaatttatttgataaa |
100 |
Q |
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| T |
38298786 |
ccattccactccattgacaattgctaaaccttctcctatcatggttactatcgaaggccttgttttaggctttgcataaaaaccaaatttatttgataaa |
38298885 |
T |
|
| Q |
101 |
atctctttggccagctctacatcagagatgcaaatcctcggttctattccgtaccaatatagaaatctctcccctgcatgcatgcatggtgaaaaattac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38298886 |
atctctttggccagctctacatcagagatgcaaatcctcggttctgttccgtaccaatatagaaatctctcccctgcatgcatgcatggtgaaaaattac |
38298985 |
T |
|
| Q |
201 |
taagaaagtaagaaagaatcatacatatatat |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
38298986 |
taagaaagtaagaaagaatcatacatatatat |
38299017 |
T |
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