View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7009_high_19 (Length: 241)
Name: NF7009_high_19
Description: NF7009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7009_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35753726 - 35753948
Alignment:
| Q |
1 |
caatgtcgaagaaatcaaatcaagcactcagctctaccataccattttgaggttgggattgaaatatgagaatgagacctcttctaaatctatgacaatt |
100 |
Q |
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| T |
35753726 |
caatgtcgaagaaatcaaatcaagcactcagctctaccataccattttgaggttgggattgaaatatgagaatgagacctcttctaaatctatgacaatt |
35753825 |
T |
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| Q |
101 |
cataacaaaccaaaagtaaagtttttacatgaaatcatactaaatatgcaatattttgaaatattcccaagaaaatggttaaaagtaagcaaaggaaaaa |
200 |
Q |
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||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
35753826 |
cataacaaaccaaaaataaagtttttacatgtaatcatactaaatatgcaattttttgaaatattcccaagaaaatggttaaaagtaagcaaacgaaaaa |
35753925 |
T |
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| Q |
201 |
agtaattaaaattatgttggtta |
223 |
Q |
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| T |
35753926 |
attaattaaaattatgttggtta |
35753948 |
T |
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