View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7009_low_16 (Length: 283)
Name: NF7009_low_16
Description: NF7009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7009_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 45451795 - 45452054
Alignment:
| Q |
7 |
tcgaagaatatttatccattacaaaagcaatcactatagagtctctaccctctcaagacaattctgtttccaatccttcaacataactgaaaacagaaaa |
106 |
Q |
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| T |
45451795 |
tcgaacaatttttatccattacaaaagcaatcactatagaatctctaccctctcaagacaattctgtttccaatccttcaacataactgaaaacagaaaa |
45451894 |
T |
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| Q |
107 |
ggtatctcttattttatttagtaataaattaatttcttagatagtggcaagtgtatatttgttagcaacaaaccgagcaataattttgtgcatgtcaaca |
206 |
Q |
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| T |
45451895 |
ggtatctcttattttatttagtaataaattaatttcttagatagtggcaagtgtatatttgttagcaacaaaccgagcaataattttgtgcatgtcaaca |
45451994 |
T |
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| Q |
207 |
aaccagtttagttgtaagattaagaatcaatttgattaacagaatatttgatcactcaag |
266 |
Q |
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| T |
45451995 |
aaccagtttagttgtaagattaagaatcaatttgattaacagaatatttgatcactcaag |
45452054 |
T |
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