View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7009_low_19 (Length: 257)
Name: NF7009_low_19
Description: NF7009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7009_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 4 - 251
Target Start/End: Complemental strand, 38298723 - 38298474
Alignment:
| Q |
4 |
actttagttttctccgtaactatatgcacaaca--atgtcttaaaaggggaaattttcacataatttgtatactaaactcatcattaaaatatgacataa |
101 |
Q |
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| T |
38298723 |
actttagttttctccgtaactatatgcacaacacaatgtcttaaaaggggaaactttcacataatttgtatactaaactcatcattaaaatatgacataa |
38298624 |
T |
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| Q |
102 |
aactataatgagattttttattcaaagatcctttctcgaatacaaaaatgttttatgggcatccacttggatcgttgatccaagatgtaagagattgaaa |
201 |
Q |
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| T |
38298623 |
aactataatgagattttttattcaaagatcctttctcgaatacaaaaatgttttatgggcatccacttggatcgttgatccaagatgtaagagattgaaa |
38298524 |
T |
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| Q |
202 |
attcagtttgaaatgaaaaactcatcatatataccaaacatattcttcga |
251 |
Q |
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| T |
38298523 |
attcagtttgaaatgaaaaactcatcatatataccaaacatatttttcga |
38298474 |
T |
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