View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7011_high_15 (Length: 238)
Name: NF7011_high_15
Description: NF7011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7011_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 29194001 - 29193830
Alignment:
| Q |
43 |
gttgtcatttcatacttatcaactaatttcaatcgtaaattttagcaaatactacaagttcaatatgctaaactatccattattcgttgtaagttgatcc |
142 |
Q |
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| T |
29194001 |
gttgtcatttcatatttatcaactagtttcaatcgtaaaatttagcaaatactacaagttcaatatgctaaactagccattattcgttgtaagttgatcc |
29193902 |
T |
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| Q |
143 |
gcaatcagctagtttctcagctatcaatggccttttaccaacgagaggctaagtcaatccaatcatactctt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
29193901 |
gcaatcagctagtttctcagctatcaatggccttttaccaacaagaggctaagtcaatccaatcatactctt |
29193830 |
T |
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