View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7011_high_17 (Length: 227)
Name: NF7011_high_17
Description: NF7011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7011_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 29194172 - 29194292
Alignment:
| Q |
95 |
ctcaaacactacttgaagcaacttctcagaaaatgctattagctagttaaaaaacgttataagctcatgagannnnnnnnnaccaaacaggtttatttcg |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
29194172 |
ctcaaacactacttgaagcaacttctcagaaaatgctataagctagttaaaaaacgttataagctcatgagatttttttttaccaaacaggtttatttcg |
29194271 |
T |
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| Q |
195 |
gtcctataaggttataagtat |
215 |
Q |
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||||||||||||||||||||| |
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| T |
29194272 |
gtcctataaggttataagtat |
29194292 |
T |
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