View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7012_low_7 (Length: 262)
Name: NF7012_low_7
Description: NF7012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7012_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 10 - 262
Target Start/End: Original strand, 43169960 - 43170212
Alignment:
| Q |
10 |
aagaatatcaggtaaagggccaaccaaattacaactaatacaagataaatctcttaactgagttgaatcctgcaaagaagaaggaaaattccaaccattg |
109 |
Q |
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| T |
43169960 |
aagaaaatcaggtaaagggccaaccaaattacaactgatacaagataaatctcttaactgagttgaatcctgcaaagaagaaggaaaattccaaccattg |
43170059 |
T |
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| Q |
110 |
ttagaagcattgagattattgttatctaatgcaagagtgtctaaactggttaacccttgaaagaaatccataggaatggaatcgaattcattgttatcaa |
209 |
Q |
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| T |
43170060 |
ttagaagcattgagattattgttatctaatgcaagagtgtctaaactggttaacccttgaaaggaatccataggaatggaatcgaattcattgttatcaa |
43170159 |
T |
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| Q |
210 |
gaaaagcgtatttgagatttgataacccttttagcgacggtaaaggaccttta |
262 |
Q |
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| T |
43170160 |
gaaaagcgtatttgagattagataacccttttagcgacggtaaaggaccttta |
43170212 |
T |
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