View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7015_low_6 (Length: 230)
Name: NF7015_low_6
Description: NF7015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7015_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 41548228 - 41548031
Alignment:
| Q |
17 |
aaatgaagaaagtacaagaaagttataatgctctcttgaaggaagccaagacggctgaaaaaactcataataagttgaaacaagaaagtaaggaaactat |
116 |
Q |
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| T |
41548228 |
aaatgaagaaagtacaagaaagttataatgctctcttgaaggaagccaagacggctgaaaaaactcataataagttgaaacaagaaagtaaggaaactat |
41548129 |
T |
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| Q |
117 |
tgaatttctaagaaagagaaacgttgggttgaagtgtgaggttgacaggttgaacgnnnnnnngatggaggaagaccatgaacttgaagtgttgagac |
214 |
Q |
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| T |
41548128 |
tgaatttctaagaaagagaaacgttgggttgaagtgtgaggttgacaggttgaacgaaaaaaagatggaggaagaccatgaacttgaagtgttgagac |
41548031 |
T |
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