View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7017_low_20 (Length: 448)
Name: NF7017_low_20
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7017_low_20 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 109 - 430
Target Start/End: Original strand, 12131580 - 12131909
Alignment:
| Q |
109 |
ccaataccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcac |
208 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12131580 |
ccaataccaactctcatgcgtcaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacatttaggggcagataatctcac |
12131679 |
T |
|
| Q |
209 |
attgtacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcg |
308 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
12131680 |
attgtacatgtcgtgattgtaaccgaagacgcgtcagaacacactctctgcaaatcctccataactaattacgagccttatgatgggaattctccttccg |
12131779 |
T |
|
| Q |
309 |
gattctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcata----gtttaagtactatgcctc----gtgtgtatgtactatt |
400 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
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|
| T |
12131780 |
gattctatgtcactctccttcaacatggaatcgatcagtatgcagcaacttcatcatagcatgtttaagtactatgcctcatgtatgtgtatgtactatt |
12131879 |
T |
|
| Q |
401 |
agtactattatctaatagtacttactaagt |
430 |
Q |
| |
|
| |||||||||||||||||||||||||||| |
|
|
| T |
12131880 |
actactattatctaatagtacttactaagt |
12131909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 88224 - 87888
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||| | |||||||||||| ||| |||||||| ||||||||||||||||||||| | || |||| ||||| | |||| ||||||||||||||||||| |
|
|
| T |
88224 |
ctttctaagcgacatatatcaaaaacaaaatctgccaaactgctcacagttccaactcgcgattgccgcacaatcgaaagtcctgcccaataccaactct |
88125 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||| | ||||| ||||||||| |||| ||||||||||||||| ||||||||| |||||||||| | ||||||||||||||| ||| |
|
|
| T |
88124 |
cacatgccaccgtacaa-------cccacaaaagcatgccaatcatcctcaacaaccgtatcacacg-aggggcagatcacctcacattgtacatgccgt |
88033 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
||||||| |||||||||||| ||||||| | |||||||||||||||||| |||||||| | |||||||| |||||| |||| | ||||| | |||| |
|
|
| T |
88032 |
gattgtaatcggagacgcgtcggaacacatcccctgcaaatcctccataacaaattacgagctttatgatgagaattcaccttccaaattcttttccact |
87933 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|| |||||||| |||| ||||||||||| ||||||| |||||||| |
|
|
| T |
87932 |
cttcttcaacatggaaccgatcagtatgtagcaactccatcatag |
87888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 12131150 - 12131253
Alignment:
| Q |
13 |
aatatcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaa |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12131150 |
aatatcttgactttctgaacgacatatatcaaaaataaaatctgtcaaactgctcacagttccaacacgcggttgcagcacacacaaaagccctgcccaa |
12131249 |
T |
|
| Q |
113 |
tacc |
116 |
Q |
| |
|
|||| |
|
|
| T |
12131250 |
tacc |
12131253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 23 - 263
Target Start/End: Original strand, 18345995 - 18346226
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
18345995 |
ctttctaaacgacatatatcaaaaacaaaatctatcaaactgctcacagttccaactcacggttgcagcacagtcgaaagccctgcccaataccaactct |
18346094 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||| | | |||||||||| ||| ||| ||||| ||||||||| ||||||||| || | || || || |||||||||| || |||| |
|
|
| T |
18346095 |
cacgcgctacc-------gtacaacccac-aaagcataccaatcgtcctcaacaaccgtatcaca-ccagagacaaatcatgtcacattgtatatatcgt |
18346185 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaat |
263 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |||||| |
|
|
| T |
18346186 |
gattgtaatcggagacgcgtcagaacaaactctccgcaaat |
18346226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 21 - 345
Target Start/End: Complemental strand, 20515188 - 20514872
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
|||||||||||| |||||| ||| ||| |||||||| |||||| || ||||||||| | || |||||||||| |||| |||||| |||||||||| |
|
|
| T |
20515188 |
gactttctgaacaacatatgtcaaaaacaaaatctgccaaactagtcttagttccaactcgcgtttgcagcacagttgaaagtcctgccaaataccaact |
20515089 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
||| |||||| | ||||||||||||| ||| ||||||||||||||| ||||||||| ||| ||||| | ||||||||||||||| | |
|
|
| T |
20515088 |
ctcccgcgccac-------ggaacaacccacaaaagcataccaatcatcctcaacaaccgtatcacaccaagga-cagatcacctcacattgtacatgcc |
20514997 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
||| || ||||||||||| ||| |||| | |||||||||||||||||| ||||| | |||||| |||||||| |||| | |||||||||||| |
|
|
| T |
20514996 |
acgattatagttggagacgcgtcggaatacaccccctgcaaatcctccataacaaattatgtgttttatgaggggaattcaccttccagattctatgtca |
20514897 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatca |
345 |
Q |
| |
|
||||||||||||| |||| |||||| |
|
|
| T |
20514896 |
ctctccttcaacatggaaccgatca |
20514872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 315
Target Start/End: Original strand, 34696424 - 34696708
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||||||| || |||||||| |||||||||| |||||||||| | || || ||||||| |||||||||||||||||||||||| |
|
|
| T |
34696424 |
ctttctgaacaacatatatcaaaagcaaaatctgccaaactgctctcagttccaactcgcgttttcagcacagttgaaagccctgcccaataccaactct |
34696523 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||||| | |||||||||||||| |||| |||||||||| || | ||||||| || |||| |||| | ||||||||||||||| || |
|
|
| T |
34696524 |
cacgcgccacc-------gtacaacccacaaaagcatgccaatcatcctaaatactcgtatcgca-ccagggacagaatacctcacattgtacatgccgc |
34696615 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattcta |
315 |
Q |
| |
|
||||||| ||||||||| || ||||| || ||||||||||||||| | ||||| | |||||| |||||||| |||||| ||||||| |
|
|
| T |
34696616 |
aattgtagttagagacgcgtaggagcacacctcctacaaatcctccataacaagttacgtgctttatgaggggaattcacctttcagattcta |
34696708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 315
Target Start/End: Original strand, 34718836 - 34719120
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||||||| || |||||||| |||||||||| |||||||||| | || || ||||||| |||||||||||||||||||||||| |
|
|
| T |
34718836 |
ctttctgaacaacatatatcaaaagcaaaatctgccaaactgctctcagttccaactcgcgttttcagcacagttgaaagccctgcccaataccaactct |
34718935 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||||| | |||||||||||||| |||| |||||||||| || | ||||||| || |||| |||| | ||||||||||||||| || |
|
|
| T |
34718936 |
cacgcgccacc-------gtacaacccacaaaagcatgccaatcatcctaaatactcgtatcgca-ccagggacagaatacctcacattgtacatgccgc |
34719027 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattcta |
315 |
Q |
| |
|
||||||| ||||||||| || ||||| || ||||||||||||||| | ||||| | |||||| |||||||| |||||| ||||||| |
|
|
| T |
34719028 |
aattgtagttagagacgcgtaggagcacacctcctacaaatcctccataacaagttacgtgctttatgaggggaattcacctttcagattcta |
34719120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 39826377 - 39826713
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||| ||| ||| ||||||| ||| | |||| |||||||||| | || ||| |||||| |||| ||||||||||||||||| | |
|
|
| T |
39826377 |
ctttctgaacaacatatgtcaaaaacaaaatctaacaagcggctctcagttccaactcgcgtttgtagcacagttgaaagtcctgcccaataccaacttt |
39826476 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||| | | ||||| ||||| ||| |||| ||||||||||||||| ||||||||| |||||||||| | |||||||||||||| |||| |
|
|
| T |
39826477 |
cacgcgcaatcgtacaa-------cccacgaaagcatgccaatcatcctcaacagccgtatcacacc-aggggcagatcacctcacattgtacatatcgt |
39826568 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|| | | |||||||| || |||||||| | |||||||||| |||||| ||||||| | |||||| |||||||| |||| ||||||||| |||| |
|
|
| T |
39826569 |
gatcgaagtcggagacgagtaggaacacaccccttgcaaatcctgcataacaaattacgtgctttatgaggggaattcaccttctagattctatgccact |
39826668 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||| |||||| |||| | |||||| || | ||||| |||||||| |
|
|
| T |
39826669 |
ctccctcaacatggaaccaatcagtgtgtaacaactccatcatag |
39826713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 136; Significance: 9e-71; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 29368556 - 29368893
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||||||||||||||||||| |||| |||| | ||||||||||||| | ||| || || |||||||||||| |
|
|
| T |
29368556 |
gactttctgaacgacatacatcaaaaacaaaatctgtcaaactgctcatagtttcaactcgcggttgcagcacagtcgaaatcc-tggccaataccaact |
29368654 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
|||||| |||| || |||||||||||||| |||| ||||||||||||||| |||||||||| | |||| || || ||||||||||||||||||| |
|
|
| T |
29368655 |
ctcatgtgcca-ctg------tacaacccacaaaagcatgccaatcatcctcaacagtcgtatcaca-tcagggacatatcatctcacattgtacatgtc |
29368746 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
|| ||||||| || ||||| ||| ||||||||||| |||||||||||||||| |||||||| | |||||| |||||||| |||| | ||| |||| || |
|
|
| T |
29368747 |
gtgattgtaatcgaagacgtgtcggaacacactctttgcaaatcctccataataaattacgagctttatgaggggaattcaccttccatattttatgcca |
29368846 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||| |||||||| |
|
|
| T |
29368847 |
ctctccttcaacatggaatcgatcagtatgtagcaactccatcatag |
29368893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 15606521 - 15606859
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
||||||| |||| |||||| ||| | | ||||| || ||||||||||| ||| ||||| | || ||||||||| | ||||||||||||||||||||| |
|
|
| T |
15606521 |
gactttcagaacaacatatgtcaaagacaaaatttgccaaactgctcaaagtgccaactcgcgcttgcagcacggtcgaaagccctgcccaataccaaca |
15606620 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
||||||||||| | || || |||||||||| |||| |||||||||||||| ||||||| |||| |||| | ||||||||||||||||| |
|
|
| T |
15606621 |
ctcatgcgccaccatataa-------cccacaaaaatatgttaatcatcctcaacagctctatcacacc-agggaaagatcacctcacattgtacatgtc |
15606712 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
|| |||||| ||||||||||| |||||||| | |||||||||||||||||| |||||| | |||||| ||||||| |||| | |||||||| || |
|
|
| T |
15606713 |
gtgattgtagtcggagacgcgttggaacacaccccctgcaaatcctccataacaaattacatgctttatgaggggaatttaccttccatattctatgcca |
15606812 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||||||||||| |||||||||||||||| | ||||| |||||||| |
|
|
| T |
15606813 |
ctctccttcaacatggaatcgatcagtatgtaacaactccatcatag |
15606859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 363
Target Start/End: Original strand, 19364461 - 19364790
Alignment:
| Q |
17 |
tcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaatacc |
116 |
Q |
| |
|
||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||| ||| | ||||||| |||||||||| |
|
|
| T |
19364461 |
tcttggctttctgaacgacatatatgaaaaataaaatttgtcaaactgctcacagttccaactcacggttgcaacactatcgaaagcccagcccaatacc |
19364560 |
T |
|
| Q |
117 |
aactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtaca |
216 |
Q |
| |
|
|||||||| |||| |||| |||||||||||||| |||| |||||||||| || ||||||||| |||||| || | ||||||||||| | | |
|
|
| T |
19364561 |
aactctcacacgcc-----acaa--tacaacccacaaaagcatgacaatcatcct--ac---cgtatcaca-ttagggacaagtcatctcacattgcata |
19364647 |
T |
|
| Q |
217 |
tgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctat |
316 |
Q |
| |
|
|||||| |||||| ||||||| ||||||| ||| | ||| ||||||||| ||||| |||||||| | |||||| | ||| |||| | |||||||| |
|
|
| T |
19364648 |
tgtcgtgcttgtaattggagacgtgtcagaatacaatatcttcaaatcctcaataacaaattacgagctttatgagg----ttcaccttccagattctat |
19364743 |
T |
|
| Q |
317 |
gtcactctccttcaacagggaatcgatcagtatgcagcaacttcatc |
363 |
Q |
| |
|
| ||||||||||||||| |||||| | ||||||| || |||| |||| |
|
|
| T |
19364744 |
gccactctccttcaacatggaatcaaccagtatgtagtaactccatc |
19364790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 142 - 368
Target Start/End: Original strand, 30803178 - 30803403
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcg |
241 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||| | | | || || | |||||||| |||||||||| |||||| ||||||| || |
|
|
| T |
30803178 |
tacaacccacaaaaacatgtcaatcatcttcaacagtcgtatcacact-atgtacatatcacctcacattatacatgtcgtgattgtagtcggagacacg |
30803276 |
T |
|
| Q |
242 |
tcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcg |
341 |
Q |
| |
|
||| ||||||| | |||||||||||||||||| ||||| | |||||| |||||||| |||| | ||||||||||| ||||| ||||||| | || || |
|
|
| T |
30803277 |
tcataacacaccccctgcaaatcctccataacaaattatgtgttttatgaggggaattcaccttccagattctatgtctctctctttcaacatgaaaccg |
30803376 |
T |
|
| Q |
342 |
atcagtatgcagcaacttcatcatagt |
368 |
Q |
| |
|
|||| | || | ||||| ||||||||| |
|
|
| T |
30803377 |
atcactgtggaacaactccatcatagt |
30803403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 367
Target Start/End: Original strand, 11732203 - 11732503
Alignment:
| Q |
59 |
aaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactctcatgcgccaacttacaagttacaacccacaaaaaca |
158 |
Q |
| |
|
|||||||||||| ||||||| | ||||||| |||| | |||||| |||| |||||||||||||| |||||| | |||| |||||||| || |
|
|
| T |
11732203 |
aaactgctcacaattccaactcgtggttgcaacacattcgaaagccttgcctaataccaactctcacgcgccaccgcacaat-------ccacaaaatca |
11732295 |
T |
|
| Q |
159 |
tgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcgtcagaacacactctctg |
258 |
Q |
| |
|
|| |||||||| | |||| |||||||||| ||| || | |||||| ||||||||||||| |||||| ||||||| | | |||||||||||| || |
|
|
| T |
11732296 |
tgccaatcatcttgaacaatcgtatcacaccg-gggtaaggtcatctcaatttgtacatgtcgtgcttgtaatcggagacacataagaacacactctttg |
11732394 |
T |
|
| Q |
259 |
caaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcgatcagtatgcagcaact |
358 |
Q |
| |
|
|||||||||||||| |||||| | | |||||| ||||||| |||| | |||| ||||||||||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
11732395 |
taaatcctccataacaaattacaagctttatgagtggaattcaccttccagattttatgtcactctccttcaacttggaatcgactagtatgtagcaact |
11732494 |
T |
|
| Q |
359 |
tcatcatag |
367 |
Q |
| |
|
||||||||| |
|
|
| T |
11732495 |
tcatcatag |
11732503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 333
Target Start/End: Original strand, 30802603 - 30802792
Alignment:
| Q |
141 |
ttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgc |
240 |
Q |
| |
|
||||||||||| |||||||| |||| ||| |||||| |||||||||| |||| ||||| | ||||| ||||||||||||| |||||| | |||||| |
|
|
| T |
30802603 |
ttacaacccactaaaacatgccaataatcttcaacagtcgtatcaca-ccagggacagatcacctcacgttgtacatgtcgtgattgtagtcagagacgt |
30802701 |
T |
|
| Q |
241 |
gtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaaca |
333 |
Q |
| |
|
||| ||||||| |||||||||| ||||||| ||||| | |||| | |||||||| |||| | ||||||||| ||||||| ||||||| |
|
|
| T |
30802702 |
gtcggaacaca--ctctgcaaattttccataaaaaattatgtgttttataaggggaattcaccttccagattctatgacactctctttcaaca |
30802792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 8e-68; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 49950988 - 49950652
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||| |||| |||||||||||||| | ||||||||||||| ||||||||| ||||||||| |||||| |
|
|
| T |
49950988 |
ctttctgagcgacatatatcaaaaacaaaatctgccaaattgctcacagttccagcttgcggttgcagcacagtcaaaagccccgcccaatactaactct |
49950889 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
| |||||| | ||||| ||||||||| |||| |||||||||||||| | ||| ||| |||| ||||| |||| ||||||||||||||| |
|
|
| T |
49950888 |
cgcgcgccaccgtacaa-------cccacaaaagcatgccaatcatcctcaacgtctttattacaccaaggg-cagattctctcgcattgtacatgtcgt |
49950797 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| | |||||| |||||||| |||| | |||||| ||||||| |
|
|
| T |
49950796 |
gattgtaaccggagacgcgtcggaacacactctctgcaaattctccataacaaattacgagctttatgaggggaattcaccttccagattctctgtcact |
49950697 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
49950696 |
ctccttcaacatggaatcgatcagtatgtagcaactctatcatag |
49950652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 13 - 367
Target Start/End: Complemental strand, 55734684 - 55734338
Alignment:
| Q |
13 |
aatatcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaa |
112 |
Q |
| |
|
||||||| | |||||||| |||||||||||| ||| |||||||| ||| ||||||| | |||||| | |||||||||||| |||||||||||| ||| |
|
|
| T |
55734684 |
aatatctcgtctttctgagcgacatatatcaaaaacaaaatctgccaagctgctcataattccaattcgtggttgcagcacagtcaaaagccctgcgcaa |
55734585 |
T |
|
| Q |
113 |
taccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattg |
212 |
Q |
| |
|
|||||||||||| |||||| | ||||| ||||||||| |||| ||||||||||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
55734584 |
taccaactctcacgcgccaccgtacaa-------cccacaaaagcatgccaatcatcctcaacagccgtatcacccc-aggggcagatcatctcacattg |
55734493 |
T |
|
| Q |
213 |
tacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggatt |
312 |
Q |
| |
|
||||| |||| ||||||| ||||||| |||| |||||||| ||||||||||| |||||||| |||||||| | ||||| | |||||| |||| | |||| |
|
|
| T |
55734492 |
tacatatcgtgattgtaatcggagacacgtcggaacacacactctgcaaatcttccataacaaattacgagctttatggggagaattcaccttccagatt |
55734393 |
T |
|
| Q |
313 |
ctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||| ||||||| |||||||| |
|
|
| T |
55734392 |
ttatgccactctccttcaacatggaatcgatcagtatgtagcaactccatcatag |
55734338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 367
Target Start/End: Complemental strand, 2064524 - 2064184
Alignment:
| Q |
17 |
tcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaatacc |
116 |
Q |
| |
|
|||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||| | | |||||| |||| |||||||||||||||| || |
|
|
| T |
2064524 |
tcttgactttctgaacgagatatatctaaagcaaaatctgccaaactgctcacagttccaactcgcagttgcaacacagttaaaagccctgcccaattcc |
2064425 |
T |
|
| Q |
117 |
aactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtaca |
216 |
Q |
| |
|
|||||||| |||||| | ||||| ||||||||| |||| ||||||||||||||| | |||| ||| ||||| |||| ||||||||||||||| |
|
|
| T |
2064424 |
aactctcacgcgccatcgtacaa-------cccacaaaagcatgccaatcatcctcaacagttgtattacacc-aggggaagatcatctcacattgtaca |
2064333 |
T |
|
| Q |
217 |
tgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctat |
316 |
Q |
| |
|
|| || |||||||||||| || ||| ||||||||||| ||||||| |||||||| ||| |||| | || ||| | |||||| |||| | |||||||| |
|
|
| T |
2064332 |
tgctgtgattgtaaccggaatcgagtcggaacacactct--gcaaatcatccataacaaataacgagctttttgaggagaattcaccttccagattctat |
2064235 |
T |
|
| Q |
317 |
gtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| ||| | | |||||||| |
|
|
| T |
2064234 |
atcactctccatcaacatggaatcgatcagtatgtagctattccatcatag |
2064184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 367
Target Start/End: Original strand, 28538297 - 28538641
Alignment:
| Q |
13 |
aatatcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaa |
112 |
Q |
| |
|
||||||| | ||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||| | |||||||||| || | ||||||| |||| |
|
|
| T |
28538297 |
aatatctcggctttctgaacgacatatatcaaaaacaaagtctgccaaactgctcacagttccaactcgcggttgcagcgcagtcgcaagccctacccag |
28538396 |
T |
|
| Q |
113 |
taccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattg |
212 |
Q |
| |
|
||||||||||| || |||| | |||||||||||||| | |||||||||||||||||| |||| | ||| |||| || | ||||||||||| |
|
|
| T |
28538397 |
taccaactctcttgtgccacc-------gtacaacccacaaaagcttgtcaatcatcctcaacagtcgttttaca-ccagggacataccatctcacattg |
28538488 |
T |
|
| Q |
213 |
tacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggatt |
312 |
Q |
| |
|
|||||||| | ||||||| || || ||||| |||||||| | || || |||||||||||| ||||| | | |||||| |||||||| |||| | |||| |
|
|
| T |
28538489 |
tacatgtcttgattgtaatcgaaggtgcgtcggaacacacaccctacatatcctccataacaaattatgtgctttatgaggggaattcaccttccagatt |
28538588 |
T |
|
| Q |
313 |
ctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||||||| || |||||||| |||| | ||||||||| ||||||| |||||||| |
|
|
| T |
28538589 |
ctatgtca--ctgcttcaacatggaaccaatcagtatgtagcaactccatcatag |
28538641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 347
Target Start/End: Original strand, 32577551 - 32577869
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
|||||||||||| |||||| ||| ||| |||||||| ||| |||||| || ||||||| | || |||||||||| | |||| |||||| |||||||||| |
|
|
| T |
32577551 |
gactttctgaacaacatatgtcaaaaacaaaatctgccaagctgctctcaattccaactcgcgtttgcagcacagtcgaaagtcctgcctaataccaact |
32577650 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
||| |||| | | ||||| ||||| ||| |||| ||||||||||||||| |||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
32577651 |
ttcacgcgcaaccgtacaa-------cccacgaaagcatgccaatcatcctcaacagctgtatcacacc-aggggcagatcacctcacattgtacatgtc |
32577742 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
|| || | | |||||||| || |||||||| | || ||||||||||||||| ||||||| |||||| |||||||| |||| |||||||||||| |
|
|
| T |
32577743 |
gtgatcgaagtcggagacgagtaggaacacaccccctacaaatcctccataacaaattacgtgttttatgaggggaattcaccttcgagattctatgtca |
32577842 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagt |
347 |
Q |
| |
|
|||||| |||||| |||| |||||||| |
|
|
| T |
32577843 |
ctctccctcaacatggaaccgatcagt |
32577869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 29 - 367
Target Start/End: Original strand, 51260057 - 51260387
Alignment:
| Q |
29 |
gaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactctcatgcg |
128 |
Q |
| |
|
|||| |||||| ||| ||| |||||||| |||||| || |||| ||||| | | |||||||||| | |||||||||||||||||||||||||| || |
|
|
| T |
51260057 |
gaacaacatatgtcaaaaacaaaatctgccaaactacttgcagtgccaactcgtgattgcagcacagtcgaaagccctgcccaataccaactctcacgca |
51260156 |
T |
|
| Q |
129 |
ccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgt |
228 |
Q |
| |
|
||| | ||||| ||||||||| |||| ||||||||||||||| | |||||||| |||| || | | ||||||| ||||||||||| ||||| |
|
|
| T |
51260157 |
ccaccgtacaa-------cccacaaaagcatgccaatcatcctcaacagttgtatcacaccaaggg-catagcacctcacatagtacatgtcgtgattgt |
51260248 |
T |
|
| Q |
229 |
aaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctcctt |
328 |
Q |
| |
|
| ||||||||| ||||||||||| | ||||| |||||||||||| ||||| | | |||||| |||| ||| |||| | ||||||||| || ||||||| |
|
|
| T |
51260249 |
agtcggagacgcatcagaacacaccccctgcagatcctccataacaaattatgtgctttatgaggggagttcaccttccagattctatgacattctcctt |
51260348 |
T |
|
| Q |
329 |
caacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||| | || |||| ||||| | ||||| |||||||| |
|
|
| T |
51260349 |
caacatgaaactgatcggtatgtaacaactccatcatag |
51260387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 28425860 - 28425524
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| ||||| ||| ||| |||||||| ||| | |||| |||||||||||| || |||||||||| | |||| ||||||||||||||||| | |
|
|
| T |
28425860 |
ctttctgaacaacatacgtcaaaaacaaaatctgccaagcggctctcagttccaacacgcgtttgcagcacagtcgaaagtcctgcccaataccaacttt |
28425761 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||| | | ||||| || |||||| |||| ||||||||||||||| ||||||||| ||||||| | | ||||||||||||||||| | |
|
|
| T |
28425760 |
cacgcgcaaccgtacaa-------cctacaaaagcatgccaatcatcctcaacagccgtatcacaac-aggggcaaaccaactcacattgtacatgtctt |
28425669 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|| | | |||||||| || |||||||| | |||||||||||||||||| ||||||| | |||||| |||||||| |||| ||||||||| |||| |
|
|
| T |
28425668 |
gatcgaagtcggagacgagtaggaacacaccccctgcaaatcctccataacaaattacgtgctttatgaggggaattcaccttctagattctatgccact |
28425569 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|| | |||||| |||| ||||| || || | ||||| |||||||| |
|
|
| T |
28425568 |
cttcctcaacatggaaccgatccgtgtgtaacaactccatcatag |
28425524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 18442656 - 18442851
Alignment:
| Q |
13 |
aatatcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaa |
112 |
Q |
| |
|
||||||| | |||||||| |||||||||||| | | |||||||| ||||||||||| ||||| || | | ||||||||||| |||||||| || |||| |
|
|
| T |
18442656 |
aatatctcggctttctgagcgacatatatcaaatacaaaatctgccaaactgctcatagttctaattcgcagttgcagcacagtcaaaagccatgtccaa |
18442755 |
T |
|
| Q |
113 |
taccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattg |
212 |
Q |
| |
|
|||||||||||| |||||| | |||||||||||||| |||||||||||||||||| | |||||||||| ||||||||| ||||||||||| |
|
|
| T |
18442756 |
taccaactctcacgcgccacc-------gtacaacccacaaaagcatgtcaatcatcctcaatagtcgtatcaca-ccaggggcagaacatctcacattg |
18442847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 44 - 367
Target Start/End: Complemental strand, 56063646 - 56063331
Alignment:
| Q |
44 |
caaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactctcatgcgccaacttacaagtta |
143 |
Q |
| |
|
|||| |||||||| |||||| || |||| ||||| | | |||||||||| | ||||||||||||||||||||||||||||||||| | || |
|
|
| T |
56063646 |
caaaaaaaatctgccaaactacttgcagtgccaactcgtgattgcagcacagtcgaaagccctgcccaataccaactctcatgcgccac-------ggta |
56063554 |
T |
|
| Q |
144 |
caacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcgtc |
243 |
Q |
| |
|
||||| |||||| |||| ||||||||||||||| | |||||||| | | || | | ||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
56063553 |
caacctacaaaagcatgccaatcatcctcaacagttgtatcacacc-atagacatagcacctcacattgtacatgtcgtgattgtagtcggagacgcgtc |
56063455 |
T |
|
| Q |
244 |
agaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcgat |
343 |
Q |
| |
|
|| |||| | ||||| |||||||||||| ||||||| |||||| |||| ||| |||| | ||||||| | || ||||| |||||| | || | || |
|
|
| T |
56063454 |
gaaatacaccccctgcagatcctccataacaaattacgtgttttatgaggggagttcaccttccagattctaagccattctccgtcaacatgaaacctat |
56063355 |
T |
|
| Q |
344 |
cagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
| ||||| | |||||||||||||| |
|
|
| T |
56063354 |
cggtatgtaacaacttcatcatag |
56063331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 29656187 - 29656341
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||||||| ||| |||||||||||||||||| |||||||||| | ||||| || | |||| ||||||||||||||||||| |
|
|
| T |
29656187 |
ctttctgaacaacatatatcataaacaaaatctgtcaaactgctttcagttccaactcgtctttgcatcatagttgaaagtcctgcccaataccaactct |
29656286 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatc |
184 |
Q |
| |
|
||||||||| | |||||||||||||| || |||| |||||||||||||||||||| |
|
|
| T |
29656287 |
catgcgccacc-------gtacaacccacaaaagcaagtcagtcatcctcaacattcgtatc |
29656341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 187
Target Start/End: Original strand, 37246379 - 37246536
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||| ||| ||| ||||| ||||||||| ||| |||||||||| | || ||||| |||| | |||| |||| |||||||||||| | |
|
|
| T |
37246379 |
ctttctgaacaacatatgtcaaaaacaaaatttgtcaaactactctcagttccaactcgcgtttgcaacacagtcgaaagtcctgtccaataccaacttt |
37246478 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcaca |
187 |
Q |
| |
|
|| ||||| | |||| ||||||||| |||| |||||||||||||||| ||||||||| |
|
|
| T |
37246479 |
cactcgccacc-------gtacagcccacaaaagcatgccaatcatcctcaacatccgtatcaca |
37246536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 26422863 - 26422942
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|||||||||| ||| |||| ||||| ||||||||| ||||||||| | |||| ||||| | ||||||||||||||||||| |
|
|
| T |
26422863 |
tacaacccacgaaagcatgccaatcttcctcaacagccgtatcacactaaggg-cagatcacctcacattgtacatgtcgt |
26422942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 40360874 - 40360794
Alignment:
| Q |
286 |
ttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcata |
366 |
Q |
| |
|
|||||| |||||||| |||| | |||| |||||||||||||||||||| |||| |||||| | || | ||||| ||||||| |
|
|
| T |
40360874 |
ttatgaggggaattcaccttccagattttatgtcactctccttcaacatggaaccgatcaatgtgtaacaactccatcata |
40360794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 51735494 - 51735549
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaac |
78 |
Q |
| |
|
|||||||||| |||||| ||| ||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
51735494 |
ctttctgaacaacatatgtcaaaaacaaaatctgtcaaattgctctcagttccaac |
51735549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 28 - 367
Target Start/End: Complemental strand, 26296018 - 26295687
Alignment:
| Q |
28 |
tgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactctcatgc |
127 |
Q |
| |
|
|||||||||||||||| ||| |||||||| |||| | |||||||||||||| | |||||| |||| | | ||||||||||||||||||||||||| ||| |
|
|
| T |
26296018 |
tgaacgacatatatcaaaaacaaaatctgccaaatttctcacagttccaactcgcggttgtagcatagtcgaaagccctgcccaataccaactctcttgc |
26295919 |
T |
|
| Q |
128 |
gccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattg |
227 |
Q |
| |
|
|| | | ||||| |||| |||| |||| ||||||||||||||||||||||||| | | | ||||| | ||||||||||||||||||| |||| |
|
|
| T |
26295918 |
gctaccgtacaa-------cccaaaaaagcatgccaatcatcctcaacattcgtatcac-gccacagacagatcagctcacattgtacatgtcgtgattg |
26295827 |
T |
|
| Q |
228 |
taaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctcct |
327 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||||||||||| ||||||| | |||||| ||| |||| |||| | |||| |||| |||| |||| |
|
|
| T |
26295826 |
taatcggagacgcgtcggaacacactctctgcaaatcctccataataaattacgcgctttatgaggggcattcaccttccagattttatgccactatcct |
26295727 |
T |
|
| Q |
328 |
tcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
26295726 |
tcaacatggaatcgatcagtatgtagcaacttcatcatag |
26295687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 21 - 367
Target Start/End: Complemental strand, 20204623 - 20204290
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| | ||||||| |||| | |||||| ||||||||||||| |
|
|
| T |
20204623 |
gactttctgaacgacatatatcaaaaacaaaatctaccaaactgctcacagttccaattcgtggttgcaacacagtcgaaagcctgacccaataccaact |
20204524 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
|||| |||||| | | || | ||||||||| |||||||||||||||||||| ||||||||| ||||||| || |||| ||||||||| || |
|
|
| T |
20204523 |
ctcacgcgccaccgt----gt---agcccacaaaagcatgtcaatcatcctcaacaaccgtatcacacc-aggggcatatcatctaacattgtacgtg-- |
20204434 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
||||||||||||| || || ||||||||||||| ||||||||||||||| |||||||| | |||||| |||||||| |||| | ||||||| |||| |
|
|
| T |
20204433 |
---attgtaaccggagccgtgttggaacacactctctacaaatcctccataacaaattacgagctttatgaggggaattcaccttccagattctacgtca |
20204337 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||||||||||| | |||||||||||||| | ||||| |||||||| |
|
|
| T |
20204336 |
ttctccttcaacatgaaatcgatcagtatgtaacaactccatcatag |
20204290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 367
Target Start/End: Complemental strand, 25730508 - 25730170
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||| |||||| ||||||||||||| | |||||||| |||| | |||| | ||||||||||||||| |
|
|
| T |
25730508 |
gactttctgaacaacatatatcaaaaacaaaatctgccaaactattcacagttccaactcgcggttgcaccacagtcgaaagtcttgcccaataccaact |
25730409 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
| || |||||| | ||||| ||||||||| |||| ||||||||||||| | |||||||||| ||| |||| | ||||||||| ||||||| |
|
|
| T |
25730408 |
cccacgcgccatcgtacaa-------cccacaaaagcatgccaatcatcctcaatagtcgtatcacaccaagga-cagaccacctcacattgcacatgtc |
25730317 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
|| ||||||| || | | ||||| ||||||| | ||| |||||||||||||| |||||||| | |||||| |||||||| |||| | |||||| || || |
|
|
| T |
25730316 |
gtgattgtaatcgaaaatgcgtcggaacacatcccctgtaaatcctccataacaaattacgagctttatgaggggaattcaccttccagattctttgcca |
25730217 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
| ||||||||||| |||| ||||| ||||| | ||||| ||||||| |
|
|
| T |
25730216 |
cgctccttcaacatggaaccgatcggtatgtaacaactcaatcatag |
25730170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 27292110 - 27291951
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| | ||||||||||||| | ||||||||||||| | ||||| |
|
|
| T |
27292110 |
gactttctgaacgacatatatcaaaaacaaaatctgtcaaacttctcacagttccaactcgcggttgcagcacaatcgaaagccctgcccataaacaact |
27292011 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcaca |
187 |
Q |
| |
|
||||||||||| | |||||||||||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
27292010 |
ctcatgcgccatc-------gtacaacccacaaaagcatgtcaatcatcatcaacatttgtatcaca |
27291951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 30223321 - 30223657
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||| ||| ||| ||||| |||||||||||||||||||||||| | |||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
30223321 |
ctttctgaacaacatatgtcaaaaacaaaatatgtcaaactgctcacagttccaactcgcggttgcaacacagtcgaaagccctgcccaataccaactct |
30223420 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||||| | || |||||| |||| ||||||||||| ||| |||| |||||||||| ||| || || | || |||||||||||||||| |
|
|
| T |
30223421 |
cacgcgccacc-------atataacccataaaagcatgtcaatcacccttaacaatcgtatcaca-ccaggaacatatcaccttacattgtacatgtcgt |
30223512 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|||||| | ||| || || |||||||| ||||| ||||||| |||||| |||||||| |||||| ||| |||| |||| | ||| ||| |||| |
|
|
| T |
30223513 |
gattgtagtcagaggcgggttggaacacaccctctgtaaatccttcataacaaattacgagttttatgagggggattcaccttccagatcctacaccact |
30223612 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||| |||||| |||| | |||||| || | ||||| |||||||| |
|
|
| T |
30223613 |
ctccgtcaacatggaaccaatcagtgtgtaacaactccatcatag |
30223657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 345
Target Start/End: Original strand, 22767779 - 22768093
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||| ||| ||| |||||||| ||| | |||| ||||||||| | || |||||||||| | |||| |||||||||||||||| | |
|
|
| T |
22767779 |
ctttctgaacaacatatgtcaaaaacaaaatctgccaaccggctcttagttccaactcgcgtttgcagcacagtcgaaagttctgcccaataccaacttt |
22767878 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| | || | | ||||| ||||| ||| |||| ||||||||||||||| ||||||||| | |||||||||| | ||||||||||||||||||| |
|
|
| T |
22767879 |
cacgtgcaaccgtacaa-------cccacgaaagcatgccaatcatcctcaacagccgtatcacact-aggggcagatcacctcacattgtacatgtcgt |
22767970 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|| | | | |||||| || |||||||| | ||||||||||||||||| ||||||| | |||||| |||||||| |||| | ||||||||| |||| |
|
|
| T |
22767971 |
gatcgaagtcagagacgagtaggaacacaccccatgcaaatcctccataacaaattacgtgctttatgaggggaattcaccttccagattctatgccact |
22768070 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatca |
345 |
Q |
| |
|
|||| |||||| |||| |||||| |
|
|
| T |
22768071 |
ctccctcaacatggaaccgatca |
22768093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 142 - 367
Target Start/End: Complemental strand, 8387634 - 8387410
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcg |
241 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||| |||||||| | || || | | ||||||||||||||||||| |||||| ||||||| || |
|
|
| T |
8387634 |
tacaacccacaaaagcatgccaatcatcctcaacaactgtatcacacc-acggacatagcacctcacattgtacatgtcgtgattgtagtcggagacacg |
8387536 |
T |
|
| Q |
242 |
tcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcg |
341 |
Q |
| |
|
||||||||||| | ||||| |||||||||||| |||||| | |||||| |||| ||| |||| | |||||||||||| |||||||||||| | || || |
|
|
| T |
8387535 |
tcagaacacaccccctgcatatcctccataacaaattacatgctttatgaggggagttcaccttccagattctatgtcattctccttcaacatgaaaccg |
8387436 |
T |
|
| Q |
342 |
atcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||| ||||| | ||||| |||||||| |
|
|
| T |
8387435 |
atcggtatgtaacaactccatcatag |
8387410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 27533419 - 27533537
Alignment:
| Q |
13 |
aatatcttgactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaa |
112 |
Q |
| |
|
||||||| | ||||||||||||||||||||| ||| ||||||||| ||||| | || ||||||||| | || |||||||||| | |||||||||||||| |
|
|
| T |
27533419 |
aatatctcggctttctgaacgacatatatcaaaaacaaaatctgttaaactacccatagttccaactcgcgattgcagcacagtcgaaagccctgcccaa |
27533518 |
T |
|
| Q |
113 |
taccaactctcatgcgcca |
131 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27533519 |
taccaactctcatgcgcca |
27533537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 204 - 363
Target Start/End: Complemental strand, 27285028 - 27284871
Alignment:
| Q |
204 |
ctcacattgtacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcc |
303 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||| |||||||||| | |||||||||| ||||||| | |||||| ||| |||| || |
|
|
| T |
27285028 |
ctcacattgtacatgtcgtgattgtaatcggagacgcgtcgaaacacactctat--caatcctccatgctaaattacgcgctttatgaggggcattcacc |
27284931 |
T |
|
| Q |
304 |
tttcggattctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatc |
363 |
Q |
| |
|
|| | |||| ||| ||||||||||||| | |||||||||||||||| ||||||| |||| |
|
|
| T |
27284930 |
ttccagattttataccactctccttcaatatggaatcgatcagtatgtagcaactccatc |
27284871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 12660011 - 12659767
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
|||||||||||| |||||| ||| |||||||||||| |||||||||| || |||||| | |||||||||| | |||| ||||||||||||||||| |
|
|
| T |
12660011 |
gactttctgaacaacatatgtcaaaaataaaatctgccaaactgctctcaaatccaactcgtctttgcagcacagtcgaaagtcctgcccaataccaact |
12659912 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
|||| ||||| | ||||||| | |||| |||| ||||||||||||||| ||||||||| |||| || || ||||||||||||||||| | |
|
|
| T |
12659911 |
ctcacacgccacc-------gtacaacctagaaaagcatgccaatcatcctcaacaggcgtatcaca-ccagggacatatcatctcacattgtacatgcc |
12659820 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataac |
273 |
Q |
| |
|
|| |||||| || | |||||||| || ||| | || ||||||||||||||| |
|
|
| T |
12659819 |
gtgattgtagtcgaatacgcgtcaaaatacagccccttcaaatcctccataac |
12659767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 84 - 367
Target Start/End: Complemental strand, 53496661 - 53496386
Alignment:
| Q |
84 |
gttgcagcacacacaaaagccctgcccaataccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtat |
183 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||| | | ||||| ||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
53496661 |
gttgcagcacagtcgaaagccctgcccaataccaactctcatgcgctaccgtacaa-------cccacaaaagcatgccaatcatcctcaacattcgtat |
53496569 |
T |
|
| Q |
184 |
cacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaa |
283 |
Q |
| |
|
|||| | || ||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
53496568 |
cacacc-acggacagatcagctcacattgtacatgtcgtgattgtaatcggagacgcgtcggaacacactctctgcaaatcctccataataaattacgcg |
53496470 |
T |
|
| Q |
284 |
ccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
| |||||| ||| |||| |||| | |||| |||| ||||||||||||||| |||||||||||||||| ||||||| |||||||| |
|
|
| T |
53496469 |
ctttatgaggggcattcaccttccagattttatgccactctccttcaacatggaatcgatcagtatgtagcaactccatcatag |
53496386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 55199073 - 55198973
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcg |
241 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||| | | || | ||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
55199073 |
tacaacccacaaaagcatgtcaatcatcctcaacaactgtatcaca-ccacgaacatagcatctcacattgtacatgtcgtgattgtagtcggagacgcg |
55198975 |
T |
|
| Q |
242 |
tc |
243 |
Q |
| |
|
|| |
|
|
| T |
55198974 |
tc |
55198973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 53496711 - 53496659
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagtt |
73 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| | |||||| ||||||||| |
|
|
| T |
53496711 |
gactttctgaacgacatatatcaaaaacaaaatcagccaaacttctcacagtt |
53496659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 21 - 328
Target Start/End: Complemental strand, 5609006 - 5608707
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| | ||||||| ||||| | |||| ||||||||||||||||| |
|
|
| T |
5609006 |
gactttctgaacgacatatatcaaaaataaaatctgccaaactactcacagttccaactcgcggttgccgcacagtcgaaagtcctgcccaataccaact |
5608907 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
|||| ||||| ||| |||||||||||||| ||| ||||||||||||||| | |||||||| | || || || | ||||||||||||||||| |
|
|
| T |
5608906 |
ctcacgcgcc-----aca--gtacaacccacaaaagcattccaatcatcctcaacaattgtatcaca-ccaaggacaaatcacctcacattgtacatgtc |
5608815 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
| ||||||| |||||||||||||||||||| | || ||||||||||| ||| ||||| | | |||||| |||||||| |||| | |||||| || || |
|
|
| T |
5608814 |
atgattgtaatcggagacgcgtcagaacacatcccctacaaatcctccacaacaaattataagctttatgaggggaattcaccttccagattctttgcca |
5608715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 24 - 333
Target Start/End: Complemental strand, 51112979 - 51112678
Alignment:
| Q |
24 |
tttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactctc |
123 |
Q |
| |
|
|||| |||| |||||| ||| ||| |||||||| |||||| || |||| ||||| | | |||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
51112979 |
tttcggaacaacatatgtcaaaaacaaaatctgccaaactacttgcagtgccaactcgtgattgcagcacaatcgaaagccctgcccaataccaactctc |
51112880 |
T |
|
| Q |
124 |
atgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgta |
223 |
Q |
| |
|
| |||||| | ||||| |||||||||||||| ||||||| ||||||| |||||| | | | || | | ||||||||||||||||||| |
|
|
| T |
51112879 |
acgcgccaccgtacaa-------cccacaaaaacatgccaatcattctcaacaactgtatcatacc-acagacatagcacctcacattgtacatgtcgtg |
51112788 |
T |
|
| Q |
224 |
attgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactc |
323 |
Q |
| |
|
|||||| |||||||||||| |||||||| | || || |||||||||||| ||||||| | |||||| |||| ||| |||| | ||||||||| || || |
|
|
| T |
51112787 |
attgtagtcggagacgcgtcggaacacaccccctacagatcctccataacaaattacgtgctttatgaggggagttcaccttccagattctatgccattc |
51112688 |
T |
|
| Q |
324 |
tccttcaaca |
333 |
Q |
| |
|
| |||||||| |
|
|
| T |
51112687 |
ttcttcaaca |
51112678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 36733359 - 36733108
Alignment:
| Q |
22 |
actttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactc |
121 |
Q |
| |
|
||||||||||| |||||| ||| ||| ||||||||||||||||||| ||||||||| | || |||||||||| | |||| |||||||||||||||| |
|
|
| T |
36733359 |
actttctgaacaacatatgtcaaaaacaaaatctgtcaaactgctctcagttccaattcgcgtttgcagcacagtcgaaagttctgcccaataccaactt |
36733260 |
T |
|
| Q |
122 |
tcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcg |
221 |
Q |
| |
|
||| ||||| | |||||| | ||||| |||||||||| ||||||||| |||||||| |||||||||| | |||||||||||||| ||| |
|
|
| T |
36733259 |
tcacacgccacc-------gtacaactctcaaaagcatgtcaatcgtcctcaacaactgtatcaca-ccaggggcagatcacctcacattgtacatatcg |
36733168 |
T |
|
| Q |
222 |
taattgtaaccggagacgcgtcagaacaca-ctctctgcaaatcctccataactaattacg |
281 |
Q |
| |
|
| || | | ||||||| ||| |||||| ||| |||||||||||||||||| ||||||| |
|
|
| T |
36733167 |
tgatcgaagttggagacgagtcgaaacacatctc-ctgcaaatcctccataacaaattacg |
36733108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 23 - 267
Target Start/End: Complemental strand, 16098148 - 16097912
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||| |||||||||||||| ||| |||||||||||| |||||| |||||||| || | | ||||| ||| | ||| |||| ||||||||||||||| |
|
|
| T |
16098148 |
ctttcttaacgacatatatcaaaaacaaaatctgtcaacatgctcatagttccaatacgcagatgcagaacagtcgaaatccctacccaataccaactct |
16098049 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
||||||||| | ||||| |||| |||| |||| |||| ||||||||| |||||||||| |||| ||||| ||||||||||||||||||||| |
|
|
| T |
16098048 |
catgcgccaccgtacaa-------cccataaaagcatgcaaatcgtcctcaacagtcgtatcacacc-agggacagatcatctcacattgtacatgtcgt |
16097957 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctc |
267 |
Q |
| |
|
||||||| |||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
16097956 |
gattgtaatcggagatgcgtcggaacacactctctgcaaatcctc |
16097912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 271
Target Start/End: Complemental strand, 17877078 - 17876839
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| ||| ||||||||||||||| |
|
|
| T |
17877078 |
ctttctgaccgacatatatcaaaaataaaatttgtcaaactgctcacagttccaacttgcggttgcagcaaagttaaaagaccttcccaataccaactct |
17876979 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| | ||| | ||||| |||||||| |||| |||||||||||||| ||||||||| |||| || || || |||||||||||||| || |
|
|
| T |
17876978 |
cacacaccaccgtacaa--------ccacaaaagcatgccaatcatcctcaactgccgtatcaca-ccagggacatatcattgcacattgtacatgttgt |
17876888 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccata |
271 |
Q |
| |
|
|||||||||| ||||||| | |||||||||| ||||||||||||||| |
|
|
| T |
17876887 |
gattgtaaccgaagacgcgccgaaacacactctttgcaaatcctccata |
17876839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 333
Target Start/End: Complemental strand, 22288824 - 22288604
Alignment:
| Q |
105 |
ctgcccaataccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatc |
204 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||| |||||||| |||| ||||||||||||||| |||||||||| | || || | | | |
|
|
| T |
22288824 |
ctgcccaataccaactctcatgcgccaccgtacaa-------cccacaaacgcatgccaatcatcctcaacagtcgtatcacacc-acggacatagcacc |
22288733 |
T |
|
| Q |
205 |
tcacattgtacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcct |
304 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||| |||||||| | || || || ||||||||| ||||||| | |||||| |||| ||| ||| |
|
|
| T |
22288732 |
tcacattgtacatgtcgtgattgtagtcggagacgcgtcggaacacaccccctacagattctccataacaaattacgtgctttatgaggggagttcacct |
22288633 |
T |
|
| Q |
305 |
ttcggattctatgtcactctccttcaaca |
333 |
Q |
| |
|
||| |||||||||||| |||||||||||| |
|
|
| T |
22288632 |
ttcagattctatgtcattctccttcaaca |
22288604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 358
Target Start/End: Complemental strand, 1581280 - 1580947
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||| |||||||||||||||| | | ||| ||| |||||| |||||||||| ||| | |||||| | || | | |||||||||||||||| |||||| |
|
|
| T |
1581280 |
ctttttgaacgacatatatcaaagacaaagtctaccaaacttctcacagttcaaactcgcggttggaacatagtcgcaagccctgcccaatacaaactct |
1581181 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||||| | ||||| ||||||||| |||| ||||||||||||||| || ||| | ||| || || ||||||||||||||||||||| |
|
|
| T |
1581180 |
cacgcgccaccgtacaa-------cccacaaaagcatgccaatcatcctcaacaactgtttcagacaaagga-catatcatctcacattgtacatgtcgt |
1581089 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataacta------attacgaaccttatgatgggaattctcctttcggattctat |
316 |
Q |
| |
|
||||||| || || ||||| ||||||||||||| ||||||||||||| | | ||||| | | |||||| |||||||| |||| | |||| ||| |
|
|
| T |
1581088 |
gattgtaatcgaaggagcgtcggaacacactctctacaaatcctccatagcaagttacgattacaagctttatgaggggaattcaccttccagattttat |
1580989 |
T |
|
| Q |
317 |
gtcactctccttcaacagggaatcgatcagtatgcagcaact |
358 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
1580988 |
gtcattctccttcaacatggaatcgatcagtatgtagcaact |
1580947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 16096773 - 16096667
Alignment:
| Q |
262 |
atcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttca |
361 |
Q |
| |
|
||||||||||| |||||||| | |||||| |||||||| |||| | ||||||||||||||||||||||||| ||||| |||| ||||| |||||||||| |
|
|
| T |
16096773 |
atcctccataataaattacgagctttatgaggggaattcaccttccagattctatgtcactctccttcaacatggaattgatcggtatgtagcaacttca |
16096674 |
T |
|
| Q |
362 |
tcatagt |
368 |
Q |
| |
|
||||||| |
|
|
| T |
16096673 |
tcatagt |
16096667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 9329123 - 9329459
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||| ||| ||| |||||||||||| | |||| |||||||||| | || ||||| |||| | |||| | | ||||||||||||| | |
|
|
| T |
9329123 |
ctttctgaacaacatatgtcaaaaacaaaatctgtcaagcggctctcagttccaactcacgtttgcaacacagtcgaaagtcttacccaataccaacttt |
9329222 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| ||| | | ||||| ||||| |||||||| ||||||||||||||| ||| |||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
9329223 |
cacgcggaaccgtacaa-------cccacgaaaacatgccaatcatcctcaacaactgtaccacacc-aggggcagatcacctcacattgtacatgtcgt |
9329314 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|| | | ||||||| || |||||||| | ||| |||||||||||||| ||||||| |||||| |||||||| |||| ||||||||| |||| |
|
|
| T |
9329315 |
gatcgaagtcggagacaagtaggaacacaccccctgaaaatcctccataacaaattacgtgttttatgaggggaattcaccttcgagattctatgccact |
9329414 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||| |||||| ||| |||||||| || | ||||| |||||||| |
|
|
| T |
9329415 |
ctccctcaacatagaaccgatcagtgtgtaacaactccatcatag |
9329459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 347
Target Start/End: Original strand, 29201557 - 29201700
Alignment:
| Q |
204 |
ctcacattgtacatgtcgtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcc |
303 |
Q |
| |
|
|||||||||| |||||||| |||||| | |||| || || |||||||| | ||||||||||||||| | ||||||| | |||||| |||||||| || |
|
|
| T |
29201557 |
ctcacattgtgcatgtcgtgattgtagtctgagatgcatcggaacacaccccatgcaaatcctccatagcaaattacgtgctttatgaggggaattcacc |
29201656 |
T |
|
| Q |
304 |
tttcggattctatgtcactctccttcaacagggaatcgatcagt |
347 |
Q |
| |
|
|| | ||||||||||||||||| ||||||| | | ||||||||| |
|
|
| T |
29201657 |
ttccagattctatgtcactctcattcaacatgaagtcgatcagt |
29201700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 16731546 - 16731466
Alignment:
| Q |
88 |
cagcacacacaaaagccctgcccaataccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaac |
175 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||| |||||| | ||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
16731546 |
cagcacagtcaaaagccccgcccaataccaactctcacgcgccacc-------ttataacccacaaaagcatgtcaatcatcctcaac |
16731466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 17709680 - 17709600
Alignment:
| Q |
88 |
cagcacacacaaaagccctgcccaataccaactctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaac |
175 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||| |||||| | ||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
17709680 |
cagcacagtcaaaagccccgcccaataccaactctcacgcgccacc-------ttataacccacaaaagcatgtcaatcatcctcaac |
17709600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 79; Significance: 9e-37; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 43318550 - 43318885
Alignment:
| Q |
23 |
ctttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaactct |
122 |
Q |
| |
|
|||||||||| |||||| ||| ||| |||||||| |||||||||| || ||||||| | || ||||||||| || |||| ||||||||||||||||| | |
|
|
| T |
43318550 |
ctttctgaacaacatatgtcaaaaacaaaatctgccaaactgctctcatttccaactcgcgtatgcagcacagacgaaagtcctgcccaataccaacttt |
43318649 |
T |
|
| Q |
123 |
catgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgt |
222 |
Q |
| |
|
|| |||||| | ||||| ||||||||| |||| ||||||||||||||| ||||||||| || || || | ||||||||||||||| ||| |
|
|
| T |
43318650 |
cacgcgccaccgtacaa-------cccacaaaagcatgccaatcatcctcaacaaccgtatcacaccaagaa-caaatcacctcacattgtacatgacgt |
43318741 |
T |
|
| Q |
223 |
aattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcact |
322 |
Q |
| |
|
|| ||| |||||| ||||| ||||||| | ||||||||||||||||| ||||| | | |||||| |||||||| |||| | |||||||||||| | |
|
|
| T |
43318742 |
gatcgtagtcggagatgcgtcgaaacacaccc-ctgcaaatcctccataataaattatgtgctttatgaggggaattcaccttccagattctatgtcatt |
43318840 |
T |
|
| Q |
323 |
ctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||||||||| |||| |||||||| || | ||||| |||||||| |
|
|
| T |
43318841 |
ctccttcaacatggaaccgatcagtgtgtaacaactccatcatag |
43318885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 21371558 - 21371895
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
|||||||||||| || ||| ||| |||||||||||| |||||||||| |||||||||| | || |||||||||| | |||| ||||||||||||||||| |
|
|
| T |
21371558 |
gactttctgaacaacttatgtcaaaaataaaatctgccaaactgctctcagttccaactcgcgtttgcagcacagtcgaaagtcctgcccaataccaact |
21371657 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
|||| ||||| ||| ||||||| |||||| |||| ||||||||||||||| | |||| ||| |||| ||||| | |||||||||||||||| |
|
|
| T |
21371658 |
ctcacgcgcc-act------gtacaacctacaaaagcatgccaatcatcctcaacagttgtattaca-ccagggacagatcacctcacattgtacatgtt |
21371749 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
|| |||||| ||||||| | | | |||| | | | ||||||||||||||| |||||| | |||||| || ||||| |||| | ||||||||| || |
|
|
| T |
21371750 |
gtgattgtagtcggagacacattgggacac-cccccgacaaatcctccataacaaattacatgctttatgagggaaattcaccttccagattctatgcca |
21371848 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||||||||| || |||| |||||||| || | |||||||||||||| |
|
|
| T |
21371849 |
ctctccttcatcatggaaccgatcagtgtgtaccaacttcatcatag |
21371895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 40589235 - 40589555
Alignment:
| Q |
21 |
gactttctgaacgacatatatcacaaataaaatctgtcaaactgctcacagttccaacacccggttgcagcacacacaaaagccctgcccaataccaact |
120 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| | | |||| ||||| | |||| ||| ||||||||||||| |
|
|
| T |
40589235 |
gactttctgaacgacatatatcaaaaataaaatctgcaaaactactcacagttccaactcgtgattgccgcacagtcgaaagtcctacccaataccaact |
40589334 |
T |
|
| Q |
121 |
ctcatgcgccaacttacaagttacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtc |
220 |
Q |
| |
|
||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||| |||| || || | ||||||||||||||||| |
|
|
| T |
40589335 |
ctcatgcgccacc-------gtacaacccacaaaagcatgtcaatcatcctcaacaaatgtatcaca-ccagggacaaatcacctcacattgtacatgtc |
40589426 |
T |
|
| Q |
221 |
gtaattgtaaccggagacgcgtcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtca |
320 |
Q |
| |
|
|| ||| |||||||| |||||||||||||| ||||| |||||||| | |||||| |||||||| || | | |||| ||||||| |
|
|
| T |
40589427 |
gt------------------gtcggaacacaccctctgcaaatcctcgataacaaattacgagctttatgaggggaattcaccatccagattttatgtca |
40589508 |
T |
|
| Q |
321 |
ctctccttcaacagggaatcgatcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
||||||||||||| | || ||||| |||| ||||||| | |||||| |
|
|
| T |
40589509 |
ctctccttcaacatgaaactgatcactatgtagcaactccttcatag |
40589555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 367
Target Start/End: Complemental strand, 7126776 - 7126552
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcg |
241 |
Q |
| |
|
||||||||||||| |||| |||||||| ||||||| |||| |||| | || ||||||| | | ||||||||||||||||| || | | |||||||| | |
|
|
| T |
7126776 |
tacaacccacaaatgcatgccaatcatcatcaacatccgtaacaca-tcagaggcagatcaccccacattgtacatgtcgtgatcgaagtcggagacgag |
7126678 |
T |
|
| Q |
242 |
tcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcg |
341 |
Q |
| |
|
| |||||||| | |||||||||||||||||| ||||||| | |||||| |||||||| |||| |||| |||| |||| ||| |||||| |||| || |
|
|
| T |
7126677 |
taggaacacaccccctgcaaatcctccataacaaattacgtgctttatgaggggaattcaccttcaagattttatgccactatccctcaacatggaaccg |
7126578 |
T |
|
| Q |
342 |
atcagtatgcagcaacttcatcatag |
367 |
Q |
| |
|
|||||| || | ||||| |||||||| |
|
|
| T |
7126577 |
atcagtgtgtaacaactccatcatag |
7126552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 331
Target Start/End: Original strand, 478689 - 478877
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtatcacagttaggggcagataatctcacattgtacatgtcgtaattgtaaccggagacgcg |
241 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||| ||||||||| ||| || || | ||||||||||||||| ||| || ||| |||||||| |
|
|
| T |
478689 |
tacaacccacaaaagcatgccaatcatcctcaacagccgtatcacaccaagga-caaatcacctcacattgtacatgacgtgatcgtagtaagagacgcg |
478787 |
T |
|
| Q |
242 |
tcagaacacactctctgcaaatcctccataactaattacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaa |
331 |
Q |
| |
|
|| |||||||| | ||| ||||||||||||| ||||||| | |||||| |||||||| |||| | ||| |||||||| |||||||||| |
|
|
| T |
478788 |
tcggaacacaccccctgtaaatcctccataataaattacgtgctttatgaggggaattcaccttccagatcctatgtcattctccttcaa |
478877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 368
Target Start/End: Original strand, 8451815 - 8451907
Alignment:
| Q |
276 |
attacgaaccttatgatgggaattctcctttcggattctatgtcactctccttcaacagggaatcgatcagtatgcagcaacttcatcatagt |
368 |
Q |
| |
|
||||||| |||||||| |||||||| | || | ||||||||| ||||||||||||||| |||| |||||| | || | ||||||||||||||| |
|
|
| T |
8451815 |
attacgagccttatgaggggaattcacattccagattctatgccactctccttcaacatggaaccgatcattgtgtaacaacttcatcatagt |
8451907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 8451747 - 8451788
Alignment:
| Q |
142 |
tacaacccacaaaaacatgtcaatcatcctcaacattcgtat |
183 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8451747 |
tacaacccacaaaaacatgccaatcatcctcaacattcgtat |
8451788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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