View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7017_low_35 (Length: 341)

Name: NF7017_low_35
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7017_low_35
NF7017_low_35
[»] chr5 (19 HSPs)
chr5 (1-331)||(30136426-30136756)
chr5 (253-322)||(21522736-21522805)
chr5 (253-322)||(21533302-21533371)
chr5 (264-324)||(41995455-41995515)
chr5 (255-322)||(31084309-31084376)
chr5 (251-305)||(12159955-12160009)
chr5 (253-307)||(40131622-40131676)
chr5 (253-322)||(10298555-10298624)
chr5 (251-300)||(30098334-30098383)
chr5 (253-301)||(8420034-8420082)
chr5 (253-301)||(41633742-41633790)
chr5 (269-307)||(883652-883690)
chr5 (253-315)||(33178018-33178080)
chr5 (262-300)||(38749576-38749614)
chr5 (264-305)||(15405070-15405111)
chr5 (261-322)||(22013400-22013461)
chr5 (253-302)||(22423816-22423865)
chr5 (264-301)||(43001807-43001844)
chr5 (253-305)||(21542033-21542085)
[»] chr8 (16 HSPs)
chr8 (253-322)||(18170486-18170555)
chr8 (253-322)||(18634054-18634123)
chr8 (253-322)||(15816133-15816202)
chr8 (253-322)||(18964163-18964232)
chr8 (253-322)||(22651962-22652031)
chr8 (262-305)||(3677789-3677832)
chr8 (249-300)||(7208123-7208174)
chr8 (263-330)||(9382950-9383017)
chr8 (253-303)||(4948657-4948707)
chr8 (264-322)||(36450769-36450827)
chr8 (253-302)||(7658469-7658518)
chr8 (253-302)||(14134705-14134754)
chr8 (253-298)||(22493504-22493549)
chr8 (262-302)||(13203647-13203687)
chr8 (253-305)||(29447114-29447166)
chr8 (253-301)||(31236581-31236629)
[»] chr6 (22 HSPs)
chr6 (253-322)||(10770678-10770747)
chr6 (253-322)||(15489736-15489805)
chr6 (253-324)||(16833292-16833363)
chr6 (253-315)||(7977834-7977896)
chr6 (264-322)||(12696310-12696368)
chr6 (253-315)||(34595127-34595189)
chr6 (264-301)||(17435206-17435243)
chr6 (253-321)||(7801160-7801228)
chr6 (257-305)||(24115855-24115903)
chr6 (264-307)||(31384921-31384964)
chr6 (255-321)||(1681745-1681811)
chr6 (255-301)||(2117083-2117129)
chr6 (264-322)||(8776988-8777046)
chr6 (250-300)||(25038072-25038122)
chr6 (253-322)||(7938102-7938171)
chr6 (253-322)||(8365523-8365592)
chr6 (254-299)||(26314639-26314684)
chr6 (256-301)||(33468389-33468434)
chr6 (264-300)||(6349752-6349788)
chr6 (253-297)||(7973665-7973709)
chr6 (253-301)||(33001293-33001341)
chr6 (251-307)||(33925037-33925093)
[»] chr7 (19 HSPs)
chr7 (256-321)||(35861951-35862016)
chr7 (253-322)||(27945027-27945096)
chr7 (253-321)||(32094024-32094093)
chr7 (262-302)||(18013087-18013127)
chr7 (263-299)||(27980805-27980841)
chr7 (253-300)||(7438714-7438761)
chr7 (255-322)||(13770677-13770744)
chr7 (261-299)||(3938152-3938190)
chr7 (255-305)||(11665446-11665496)
chr7 (253-298)||(3554510-3554555)
chr7 (243-300)||(4008558-4008615)
chr7 (243-300)||(4013950-4014007)
chr7 (267-300)||(44020983-44021016)
chr7 (253-305)||(3991327-3991379)
chr7 (261-305)||(4024030-4024074)
chr7 (261-293)||(8056957-8056989)
chr7 (253-301)||(21880159-21880207)
chr7 (253-301)||(24146823-24146871)
chr7 (252-300)||(27732242-27732290)
[»] chr4 (13 HSPs)
chr4 (253-305)||(54580027-54580079)
chr4 (251-301)||(31800480-31800530)
chr4 (253-301)||(8423722-8423770)
chr4 (264-324)||(14465090-14465150)
chr4 (262-322)||(36635310-36635370)
chr4 (256-322)||(4383354-4383419)
chr4 (253-315)||(12895120-12895182)
chr4 (273-315)||(32273550-32273592)
chr4 (264-322)||(40481623-40481680)
chr4 (253-322)||(35157989-35158058)
chr4 (253-301)||(2361979-2362027)
chr4 (264-324)||(19482652-19482712)
chr4 (253-305)||(24613705-24613757)
[»] chr3 (14 HSPs)
chr3 (264-315)||(14209106-14209157)
chr3 (253-324)||(16000020-16000091)
chr3 (253-321)||(10954939-10955007)
chr3 (264-315)||(14832092-14832143)
chr3 (264-315)||(34910310-34910361)
chr3 (253-315)||(18426942-18427004)
chr3 (253-315)||(35222931-35222993)
chr3 (262-299)||(8930843-8930880)
chr3 (261-322)||(25948899-25948960)
chr3 (253-322)||(55401061-55401130)
chr3 (202-246)||(34307716-34307760)
chr3 (253-301)||(38731225-38731273)
chr3 (256-296)||(39002044-39002084)
chr3 (256-300)||(47362570-47362614)
[»] chr2 (18 HSPs)
chr2 (251-322)||(6940241-6940312)
chr2 (253-324)||(12668427-12668498)
chr2 (253-324)||(36756348-36756419)
chr2 (264-322)||(21374714-21374772)
chr2 (253-322)||(15657850-15657919)
chr2 (253-322)||(15972859-15972928)
chr2 (253-322)||(18841017-18841086)
chr2 (253-314)||(30335411-30335472)
chr2 (253-322)||(37558963-37559032)
chr2 (253-324)||(21624250-21624322)
chr2 (253-305)||(38442310-38442362)
chr2 (262-329)||(15909645-15909712)
chr2 (255-305)||(12940941-12940991)
chr2 (253-315)||(18420438-18420500)
chr2 (259-300)||(23921261-23921302)
chr2 (264-300)||(1886893-1886929)
chr2 (253-289)||(28341873-28341909)
chr2 (253-301)||(42832280-42832328)
[»] chr1 (15 HSPs)
chr1 (253-315)||(6612175-6612237)
chr1 (253-322)||(1815243-1815312)
chr1 (253-322)||(22881620-22881689)
chr1 (253-322)||(37598818-37598886)
chr1 (251-288)||(46914041-46914078)
chr1 (253-301)||(1486713-1486761)
chr1 (261-309)||(2283665-2283713)
chr1 (262-322)||(6427336-6427396)
chr1 (257-301)||(23531786-23531830)
chr1 (253-305)||(24577190-24577242)
chr1 (253-301)||(38078665-38078713)
chr1 (250-321)||(609459-609530)
chr1 (255-301)||(18190114-18190160)
chr1 (264-305)||(32461478-32461519)
chr1 (253-301)||(21378585-21378633)
[»] scaffold0361 (1 HSPs)
scaffold0361 (264-315)||(14523-14574)
[»] scaffold0050 (1 HSPs)
scaffold0050 (253-300)||(70286-70333)
[»] scaffold0246 (1 HSPs)
scaffold0246 (264-322)||(19562-19619)
[»] scaffold0022 (1 HSPs)
scaffold0022 (262-300)||(99901-99939)
[»] scaffold0011 (1 HSPs)
scaffold0011 (253-330)||(17753-17830)
[»] scaffold0376 (1 HSPs)
scaffold0376 (253-301)||(6319-6367)
[»] scaffold0004 (1 HSPs)
scaffold0004 (262-294)||(101014-101046)


Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 30136426 - 30136756
Alignment:
Q  1 aaagattagaatggaatatgatgtactatgcttttggttattgaaatgtgacaagtcannnnnnngttatgaatttgtctttttatttccttgtttggac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  30136426 aaagattagaatggaatatggtgtactatgcttttggttattgaaatgtgacaagtcatttttttgttatgaatttgtctttttatttccttgtttggac 30136525  T
Q  101 caaacaaaagacatgtcttggggcacgttaagaggacacttttttactctgcctcctttgaagttcaaatggtgaaaagaatcaatgagaatgtgatgag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30136526 caaacaaaagacatgtcttggggcacgttaagaggacacttttttactctgcctcctttgaagttcaaatggtgaaaagaatcaatgagaatgtgatgag 30136625  T
Q  201 gtatgaagcacaaaaactttttggattaggcgtgtctcagtgtcgatataataccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    |||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  30136626 gtatgaagcacatatacttcttggattaggcgtgtctcagtgtcgatataataccgacatttataattacattgaattacgtaattttttaaaattacta 30136725  T
Q  301 gttgtattggcgtgtgagtgtctgatgtcca 331  Q
    |||||||||||||||||||||| | ||||||    
T  30136726 gttgtattggcgtgtgagtgtccggtgtcca 30136756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 21522805 - 21522736
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| |||||||||| |||||||||||||||||| ||| | ||||||| ||||||    
T  21522805 accgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21522736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 21533371 - 21533302
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| |||||||||| |||||||||||||||||| ||| | ||||||| ||||||    
T  21533371 accgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21533302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 41995515 - 41995455
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||||||||||||||| |||||||  ||||||||||||| | ||||||| ||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctg 41995455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 31084376 - 31084309
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||| || ||||||||||||||||||| ||||||| |||||||||| ||| | ||||||| ||||||    
T  31084376 cgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 12160009 - 12159955
Alignment:
Q  251 ataccgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    |||||||||||| |||||||||| ||||||||  |||||| ||||||||||||||    
T  12160009 ataccgacatttgtaattacattaaattatgtgttttttttaaattattagttgt 12159955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 40131676 - 40131622
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtat 307  Q
    ||||| ||||||||||| | |||||||||| ||||||| ||||||||||||||||    
T  40131676 accgatatttataattaaactgaattatgtgattttttcaaattattagttgtat 40131622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 10298624 - 10298555
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || ||||||||||| ||||||| | ||||| |||||||||||||| | ||||||| ||||||    
T  10298624 accgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtc 10298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 30098383 - 30098334
Alignment:
Q  251 ataccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    |||||||||| ||||||||||||||||||||| ||||| | |||||||||    
T  30098383 ataccgacatctataattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 8420082 - 8420034
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| || ||||||||||||||||||| ||||||| ||||||||||    
T  8420082 accgacacttgtaattacattgaattatgttattttttcaaattattag 8420034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 41633790 - 41633742
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||||| |||||||| |||||||||||| ||||| ||||||||||    
T  41633790 accgacatttgtaattacactgaattatgtaaatttttcaaattattag 41633742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 883690 - 883652
Alignment:
Q  269 acattgaattatgtaattttttaaaattattagttgtat 307  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  883690 acattgaattatgtaactttttaaaattattatttgtat 883652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 33178080 - 33178018
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    ||||||| || |||||||| | |||||||| ||||||| |||||||||||||| | |||||||    
T  33178080 accgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 38749576 - 38749614
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  38749576 tataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 15405070 - 15405111
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||||||||||||| | ||||||| ||||||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattattagttgt 15405111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 22013461 - 22013400
Alignment:
Q  261 ttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||||||| | |||||||||||||||  |||||||||| ||| | ||||||| ||||||    
T  22013461 ttataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtc 22013400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 22423816 - 22423865
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagt 302  Q
    |||||||| |||||||| |||||||||||| ||||| | |||||||||||    
T  22423816 accgacatatataattatattgaattatgtgattttctcaaattattagt 22423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 43001844 - 43001807
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 21542085 - 21542033
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| || |||||||| |||||||||| || |||| ||||||||||||||    
T  21542085 accgacacttgtaattacactgaattatgttatctttttaaattattagttgt 21542033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 18170486 - 18170555
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||| |||| | ||||||| ||||||    
T  18170486 accgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtc 18170555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 18634054 - 18634123
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||| |||| | ||||||| ||||||    
T  18634054 accgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtc 18634123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 15816133 - 15816202
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| ||||||||||| | |||||||| ||||||| |||||||||||||| | ||||||| ||||||    
T  15816133 accgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 18964232 - 18964163
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||  ||||||||||||||||||||| ||||| |||||  ||||||||| ||| ||||| ||||||    
T  18964232 accgacacatataattacattgaattatgtgattttctaaaaaaattagttgtcttgacgtgtcagtgtc 18964163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 22652031 - 22651962
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||| |||||||||||| ||||||| |||||||||| ||| | ||||||| ||||||    
T  22652031 accgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 22651962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 3677832 - 3677789
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||    
T  3677832 tataattacatagaattatgtgattttttaaaattattaattgt 3677789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 7208174 - 7208123
Alignment:
Q  249 taataccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    |||||||||||  |||||||| ||| ||||||||||||||| ||||||||||    
T  7208174 taataccgacacatataattatatttaattatgtaatttttaaaaattatta 7208123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 9383017 - 9382950
Alignment:
Q  263 ataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctgatgtcc 330  Q
    ||||||||||||||||||||| |||| | ||||||||  | |||| ||||||| |||||| |||||||    
T  9383017 ataattacattgaattatgtagttttctcaaattattcatggtatcggcgtgtcagtgtccgatgtcc 9382950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 4948707 - 4948657
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagtt 303  Q
    ||||||| || |||||||| |||||||||| ||||||| ||||||||||||    
T  4948707 accgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 36450769 - 36450827
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||| |||||| ||| ||||||| |||||||||||||| | ||||||| ||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 36450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 7658518 - 7658469
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagt 302  Q
    |||||||  |||||||||| |||||||||||||||| | |||||||||||    
T  7658518 accgacaaatataattacactgaattatgtaattttctcaaattattagt 7658469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 14134754 - 14134705
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagt 302  Q
    |||||||| |||||||||| |||||||||| ||||| | |||||||||||    
T  14134754 accgacatatataattacactgaattatgtgattttctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 22493549 - 22493504
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattat 298  Q
    |||||||| ||| |||||| |||||||||| |||||||||||||||    
T  22493549 accgacatatatgattacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 13203687 - 13203647
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattattagt 302  Q
    |||||||||| |||||||||||||||| | |||||||||||    
T  13203687 tataattacactgaattatgtaattttctcaaattattagt 13203647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 29447114 - 29447166
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| || || |||||||||||||||| ||||| | ||||||||||||||    
T  29447114 accgacacttgtagttacattgaattatgtgattttctcaaattattagttgt 29447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 31236581 - 31236629
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||  ||||||||||||||||||||| ||||| | ||||||||||    
T  31236581 accgacacatataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 10770678 - 10770747
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| |||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  10770678 accgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 15489736 - 15489805
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || ||||||||||||||| ||||||||||| |||||||||||||| | | ||||| ||||||    
T  15489736 accgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtc 15489805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 16833363 - 16833292
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||| || |||||||| |||| ||||| ||||||| |||||||||||||| | ||||||| ||||||||    
T  16833363 accgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctg 16833292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 7977834 - 7977896
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    ||||||| || |||||||| |||||||||||||||||| |||||||||| ||| | |||||||    
T  7977834 accgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgt 7977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 12696368 - 12696310
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||| |||||||||||||||||| |||||||||| ||| | ||||||| ||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtc 12696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 34595189 - 34595127
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    ||||||| || |||||||| |||||||||| ||||||| |||||||||||||| | |||||||    
T  34595189 accgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34595127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 17435243 - 17435206
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||| |||||||||||||||||||||||||||||    
T  17435243 taattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 7801160 - 7801228
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgt 321  Q
    ||||||| || |||||||  |||||||||| ||||||| |||||||||||||| | ||||||| |||||    
T  7801160 accgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 24115855 - 24115903
Alignment:
Q  257 acatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    |||| |||||||| |||||||||||| ||||||| ||||||||||||||    
T  24115855 acatatataattatattgaattatgtgattttttgaaattattagttgt 24115903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 31384964 - 31384921
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtat 307  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattattagttgtat 31384921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgt 321  Q
    ||||| || |||||||| ||||||| || ||||||| |||||||||||||| | ||||||| |||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 2117129 - 2117083
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||| |||||||| ||||||||||||| ||||||| ||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 8776988 - 8777046
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||| |||||| ||| ||||||| |||||||||||||| | ||||||| ||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 8777046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 25038072 - 25038122
Alignment:
Q  250 aataccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||||||||| |||||||| | |||||||||||||| | |||||||||    
T  25038072 aataccgacatttgtaattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 7938171 - 7938102
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| ||||||||||| | |||||| | ||||||| |||||||||| ||| | ||||||| ||||||    
T  7938171 accgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 8365523 - 8365592
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || ||||||||  ||||||||| || |||| |||||||||||||| | ||||||| ||||||    
T  8365523 accgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 8365592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 26314639 - 26314684
Alignment:
Q  254 ccgacatttataattacattgaattatgtaattttttaaaattatt 299  Q
    ||||||| ||||||||||||||||||| | ||||||| ||||||||    
T  26314639 ccgacatatataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 33468389 - 33468434
Alignment:
Q  256 gacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||| |||||||||||||||||| || ||||||| ||||||||||    
T  33468389 gacatatataattacattgaattaagttattttttcaaattattag 33468434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 6349752 - 6349788
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattatta 300  Q
    |||||||| |||||||||||||||||| |||||||||    
T  6349752 taattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 7973709 - 7973665
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaatta 297  Q
    ||||||| ||||||||||| | |||||||||||||||| ||||||    
T  7973709 accgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 33001293 - 33001341
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||  |||||||||||| |||||||| ||||||| ||||||||||    
T  33001293 accgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 33925037 - 33925093
Alignment:
Q  251 ataccgacatttataattacattgaattatgtaattttttaaaattattagttgtat 307  Q
    |||||||||  ||| |||||| |||||||| ||||||||||||||| ||||| ||||    
T  33925037 ataccgacacatattattacactgaattatataattttttaaaattgttagtagtat 33925093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 35862016 - 35861951
Alignment:
Q  256 gacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgt 321  Q
    |||| ||| |||||||||||||||||| ||||||| |||||||||||||| | ||||||| |||||    
T  35862016 gacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 27945096 - 27945027
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| |||||||||||||||| | ||||||||||| || | ||||||| ||||||    
T  27945096 accgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtc 27945027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 32094024 - 32094093
Alignment:
Q  253 accgacatttataattacattgaattatgtaatttttta-aaattattagttgtattggcgtgtgagtgt 321  Q
    |||||||||| |||||||| |||||||||| |||||||  |||||||||||||| ||||| ||| |||||    
T  32094024 accgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgt 32094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 18013087 - 18013127
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattattagt 302  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  18013087 tataattacactgaattatgtaatttttttaaattattagt 18013127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 27980841 - 27980805
Alignment:
Q  263 ataattacattgaattatgtaattttttaaaattatt 299  Q
    |||||||||||||||||||| ||||||||||||||||    
T  27980841 ataattacattgaattatgtcattttttaaaattatt 27980805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 7438761 - 7438714
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||||||    
T  7438761 accgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 13770744 - 13770677
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||| || |||||||| |||||||||||||||||| |||||||||| ||| | ||||| | ||||||    
T  13770744 cgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtc 13770677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 3938190 - 3938152
Alignment:
Q  261 ttataattacattgaattatgtaattttttaaaattatt 299  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  3938190 ttataattacattgaattatgtgatttttttaaattatt 3938152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 11665446 - 11665496
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||| ||||||||| | |||||||||| ||||||| ||||||||||||||    
T  11665446 cgacacttataattagactgaattatgtgattttttcaaattattagttgt 11665496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 3554510 - 3554555
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattat 298  Q
    |||||||| |||||||||||| |||||||||||||| | |||||||    
T  3554510 accgacatctataattacattaaattatgtaattttcttaaattat 3554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 4008558 - 4008615
Alignment:
Q  243 tcgatataataccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    |||||| ||||||||||  || ||||||||||||| |||||||||| | |||||||||    
T  4008558 tcgatacaataccgacacatacaattacattgaatcatgtaattttatcaaattatta 4008615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 4013950 - 4014007
Alignment:
Q  243 tcgatataataccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    |||||| ||||||||||  || ||||||||||||| |||||||||| | |||||||||    
T  4013950 tcgatacaataccgacacatacaattacattgaatcatgtaattttatcaaattatta 4014007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 44021016 - 44020983
Alignment:
Q  267 ttacattgaattatgtaattttttaaaattatta 300  Q
    |||||||||||||||||||||||| |||||||||    
T  44021016 ttacattgaattatgtaattttttcaaattatta 44020983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 3991379 - 3991327
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| || |||||| | |||||||||| ||||||| ||||||||||||||    
T  3991379 accgacacttgtaattatactgaattatgtgattttttcaaattattagttgt 3991327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 4024074 - 4024030
Alignment:
Q  261 ttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||||| ||| |||||||| ||||||| ||||||||||||||    
T  4024074 ttataattatattaaattatgtcatttttttaaattattagttgt 4024030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 8056957 - 8056989
Alignment:
Q  261 ttataattacattgaattatgtaattttttaaa 293  Q
    ||||||||||| |||||||||||||||||||||    
T  8056957 ttataattacactgaattatgtaattttttaaa 8056989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 21880207 - 21880159
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| || |||||||| |||||||||||||||| | ||||||||||    
T  21880207 accgacacttgtaattacactgaattatgtaattttctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 24146871 - 24146823
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||  |||||||| |||||||||||| ||||| ||||||||||||    
T  24146871 accgacacatataattatattgaattatgtgattttctaaaattattag 24146823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 27732242 - 27732290
Alignment:
Q  252 taccgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||||  |||||||||| |||||||||||||||| | |||||||||    
T  27732242 taccgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 54580027 - 54580079
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  54580027 accgacacttataattacactgaattatgtgattttttcaaattattagttgt 54580079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 31800480 - 31800530
Alignment:
Q  251 ataccgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||||| || |||||||||| |||||| ||||||||||||||||||||    
T  31800480 ataccgacacttgtaattacattaaattatttaattttttaaaattattag 31800530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 8423722 - 8423770
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||||||||||||||| |||||||||| ||||| | ||||||||||    
T  8423722 accgacatttataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 14465090 - 14465150
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||||||||||||||| ||||||| |||||||||| ||| || | |||| ||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctg 14465150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 36635370 - 36635310
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||||| |||||||||| ||||| | ||||||||||| || ||||||||| ||||||    
T  36635370 tataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtc 36635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 4383419 - 4383354
Alignment:
Q  256 gacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| |||||||| |||||||||| |||||| ||| ||||||||||||| | ||||| ||||||    
T  4383419 gacatttgtaattacactgaattatgtgatttttcaaa-ttattagttgtatcgacgtgtcagtgtc 4383354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 12895120 - 12895182
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    ||||||| || ||||||| ||||||||||| ||||||| |||||||||| ||| | |||||||    
T  12895120 accgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 32273550 - 32273592
Alignment:
Q  273 tgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||||| ||||||| |||||||||||||| |||||||||    
T  32273550 tgaattatgttattttttcaaattattagttgtgttggcgtgt 32273592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 40481680 - 40481623
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||| |||||||||| |||||| ||| ||||||||||||| ||||||| ||||||    
T  40481680 taattacactgaattatgtgatttttcaaa-ttattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 35157989 - 35158058
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| ||||||||||| | |||||||| ||||||  |||||||||||||  | ||||||| ||||||    
T  35157989 accgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtc 35158058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 2361979 - 2362027
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| || |||||||| | |||||||||||||||| ||||||||||    
T  2361979 accgacacttttaattacactaaattatgtaattttttcaaattattag 2362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 19482712 - 19482652
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||||  ||||||||| || |||| |||||||||||||| | ||||||| ||||||||    
T  19482712 taattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctg 19482652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 24613705 - 24613757
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| || || |||||||||||||||| ||||| | ||||||||||||||    
T  24613705 accgacacttgtacttacattgaattatgtgattttctcaaattattagttgt 24613757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 14209157 - 14209106
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||| |||||||||| |||||||||||||||||||||| | |||||||    
T  14209157 taattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 16000020 - 16000091
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||| || || ||||| |||||||||| ||||||| |||||||||||||| | ||||||| ||||||||    
T  16000020 accgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctg 16000091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 10955007 - 10954939
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgt 321  Q
    ||||||| || | |||||| |||||||||| ||||||| |||||||||||||| | ||||||| |||||    
T  10955007 accgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 14832143 - 14832092
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||||||| |||||| ||||||| |||||||||| ||||| |||||||    
T  14832143 taattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 34910361 - 34910310
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||| |||||||||| ||||||| |||||||||||||| | |||||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 18427004 - 18426942
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||| ||||||||||  ||||||||| ||||||| ||||||||||| || | |||||||    
T  18427004 accgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgt 18426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 35222993 - 35222931
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||  ||||||||||||||||||||| ||||| ||||| | |||||||| | |||||||    
T  35222993 accgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtcggcgtgt 35222931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 8930843 - 8930880
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattatt 299  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  8930843 tataattacatcgaattatgtgattttttaaaattatt 8930880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 25948899 - 25948960
Alignment:
Q  261 ttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||||||| |||||||||| ||||||| ||||||||||  |||| ||| ||| ||||||    
T  25948899 ttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtc 25948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 55401130 - 55401061
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| | |||||||| ||||||| |||||||||||||| | ||||| | ||||||    
T  55401130 accgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtc 55401061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 34307716 - 34307760
Alignment:
Q  202 tatgaagcacaaaaactttttggattaggcgtgtctcagtgtcga 246  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  34307716 tatgaagcacataaatttattggattaggcgtgtctcagtatcga 34307760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 38731273 - 38731225
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||  ||||| |||| |||||||||| ||||||||||||||||||    
T  38731273 accgacacatataactacactgaattatgtgattttttaaaattattag 38731225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 39002084 - 39002044
Alignment:
Q  256 gacatttataattacattgaattatgtaattttttaaaatt 296  Q
    ||||| ||||||||||||||||||||| ||||||| |||||    
T  39002084 gacatatataattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 47362614 - 47362570
Alignment:
Q  256 gacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||    
T  47362614 gacatgtataattacattcaattatgtaattttcttaaattatta 47362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 6940312 - 6940241
Alignment:
Q  251 ataccgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||||| || |||||||| | |||||||||| |||||||||||||||| ||| | ||||||| ||||||    
T  6940312 ataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtc 6940241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 12668427 - 12668498
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||| ||||||||||| |||||||||| ||||||| |||||||||||| | | ||||||| ||| ||||    
T  12668427 accgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctg 12668498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 36756348 - 36756419
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||| ||||||||||| |||||||||| |||| || |||||||||||||| | | ||||| ||||||||    
T  36756348 accgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctg 36756419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 21374714 - 21374772
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||| |||||||||||||||||| |||||||||| ||| | ||||||| ||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtc 21374772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 15657919 - 15657850
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||||| |||||||| |||||||||| ||||||  |||||||||||||  | ||||||| ||||||    
T  15657919 accgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtc 15657850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 15972928 - 15972859
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| |||||| ||||||||||| ||||||||| |||| | ||||||| ||||||    
T  15972928 accgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtc 15972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 18841017 - 18841086
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| | |||||||||||||||| |||||||||||||| |  |||||| ||||||    
T  18841017 accgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtc 18841086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 30335472 - 30335411
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtg 314  Q
    |||||||||| |||||||| | |||||||| ||||||| |||||||||||||| | ||||||    
T  30335472 accgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtg 30335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 37559032 - 37558963
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || ||||||||||||||||||| ||||||  |||||||||| ||| | ||||||| ||||||    
T  37559032 accgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtc 37558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 21624322 - 21624250
Alignment:
Q  253 accgacatttataattacattgaattatg-taattttttaaaattattagttgtattggcgtgtgagtgtctg 324  Q
    ||||||| || |||||||| ||||||||| || ||||||||||||||||| ||| | ||||||| ||||||||    
T  21624322 accgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctg 21624250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 38442362 - 38442310
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| ||||||||| |||||||||||| ||||||| |||| |||||||||    
T  38442362 accgacacttataattatattgaattatgtgatttttttaaatcattagttgt 38442310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 15909645 - 15909712
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctgatgtc 329  Q
    |||||||||| |||||||||||||||| | ||| | |||| ||||| ||||||| |||||||| ||||    
T  15909645 tataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtctggtgtc 15909712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 12940941 - 12940991
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    |||||||| |||||||| |||||||| | ||||||| ||||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgt 12940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 18420438 - 18420500
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    ||||||| |||||||| ||||||||||||| ||||| | ||||||||||  || |||||||||    
T  18420438 accgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgt 18420500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 23921302 - 23921261
Alignment:
Q  259 atttataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||||||||| |||||||||||||||| | |||||||||    
T  23921302 atttataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 1886893 - 1886929
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  1886893 taattacattgaattatgtaaatttttcaaattatta 1886929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 28341873 - 28341909
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttt 289  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  28341873 accgacatctataattacattgaattatgtcattttt 28341909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 42832280 - 42832328
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| ||||||||||| |||| ||||||||||| | ||||||||||    
T  42832280 accgacacttataattacactgaaatatgtaattttctcaaattattag 42832328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 6612175 - 6612237
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    ||||||| || |||||||| |||||||||||||||||| |||||||||  ||||| |||||||    
T  6612175 accgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgt 6612237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 1815312 - 1815243
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| |||||||||| |||||||||||| |||| |||| | ||||||| ||||||    
T  1815312 accgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 1815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 22881620 - 22881689
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| || |||||||| | |||||||| ||||||| |||||||||||||| | ||||||| ||||||    
T  22881620 accgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 37598886 - 37598818
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||| ||||||||||| |||||| ||| ||||||| |||||||||||||| | ||||||| ||||||    
T  37598886 accgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 37598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 46914041 - 46914078
Alignment:
Q  251 ataccgacatttataattacattgaattatgtaatttt 288  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46914041 ataccgacatttataattacattgaattatgttatttt 46914078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 1486713 - 1486761
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||||||||||    
T  1486713 accgacacttataattacactgaattatgtgattttttcaaattattag 1486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 2283713 - 2283665
Alignment:
Q  261 ttataattacattgaattatgtaattttttaaaattattagttgtattg 309  Q
    ||||||||||||||||| |||| ||||||| ||||||| ||||||||||    
T  2283713 ttataattacattgaatcatgtgattttttcaaattataagttgtattg 2283665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 6427396 - 6427336
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    ||||||||||||||||||||| ||||| | ||||||||||  || ||||||||| ||||||    
T  6427396 tataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 23531786 - 23531830
Alignment:
Q  257 acatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||||||||||||||||||||| || |||| ||||||||||    
T  23531786 acatttataattacattgaattatgtgatattttcaaattattag 23531830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 24577190 - 24577242
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgt 305  Q
    ||||||| || |||||||| |||||||||| ||||||| ||||||||||||||    
T  24577190 accgacacttgtaattacactgaattatgtgattttttcaaattattagttgt 24577242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 38078665 - 38078713
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| || ||||||||||||||||||| ||||||| ||||||||||    
T  38078665 accgacacttgtaattacattgaattatgtgattttttcaaattattag 38078713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 609459 - 609530
Alignment:
Q  250 aataccgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgt 321  Q
    ||||||||||| ||| ||||  ||||||||||||||||| | ||||||||||| || | ||||||| |||||    
T  609459 aataccgacatatatgattatgttgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgt 609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 18190114 - 18190160
Alignment:
Q  255 cgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||| || |||||||| |||||||||||||||||| ||||||||||    
T  18190114 cgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 32461478 - 32461519
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgt 305  Q
    |||||||||| |||||||| ||||||| ||||||||||||||    
T  32461478 taattacattaaattatgtgattttttcaaattattagttgt 32461519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 21378633 - 21378585
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    ||||||| || |||||||| |||||||||||||||||| || |||||||    
T  21378633 accgacacttgtaattacactgaattatgtaattttttcaatttattag 21378585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 14574 - 14523
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgt 315  Q
    |||||||| |||||||||| ||||||| |||||||||||||| | |||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 70333 - 70286
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||| ||||||||||| |||||||||| ||||||| |||||||||    
T  70333 accgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 19619 - 19562
Alignment:
Q  264 taattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtc 322  Q
    |||||||| |||||||||| |||||| ||| ||||||||||||| ||||||| ||||||    
T  19619 taattacactgaattatgtgatttttcaaa-ttattagttgtatcggcgtgtcagtgtc 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 99939 - 99901
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaattatta 300  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  99939 tataattacattgaattatgttattttctaaaattatta 99901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 17753 - 17830
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattagttgtattggcgtgtgagtgtctgatgtcc 330  Q
    ||||||| || |||||||| | |||||||| ||||||| |||||||||||||| |  |||||| | |||| |||||||    
T  17753 accgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccgatgtcc 17830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 6367 - 6319
Alignment:
Q  253 accgacatttataattacattgaattatgtaattttttaaaattattag 301  Q
    |||||||  |||||||||||||||||||| |||||| | ||||||||||    
T  6367 accgacacatataattacattgaattatgcaattttgtcaaattattag 6319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 101046 - 101014
Alignment:
Q  262 tataattacattgaattatgtaattttttaaaa 294  Q
    ||||||||||||||||||||| |||||||||||    
T  101046 tataattacattgaattatgtcattttttaaaa 101014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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