View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7017_low_40 (Length: 328)
Name: NF7017_low_40
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7017_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 45755999 - 45756302
Alignment:
| Q |
19 |
gtgccaatgtttcttttacatgcaactgaacgagaccctcacatgcacctaatgataataac--tgataatattggttcaattgaaggaggctagtgtta |
116 |
Q |
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| T |
45755999 |
gtgccaatgtttcttttacatgcaactgaacgagaccctcagatgcacctaatgataataacaatgataatattggttcaattgaaggaggctagtgtta |
45756098 |
T |
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| Q |
117 |
attatgaagcaacgaaacgaaagcatggaccaaaaagtacgagttaaatacaatttaggcaccaaaataattaaattgta-gaataccagttattgacaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
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| T |
45756099 |
attatgaagcaacgaaacgaaagcatggaccaaaaagtacgagttaaatacaatttaggcaccaaaataattaaattgtaggagtaccagttattgacaa |
45756198 |
T |
|
| Q |
216 |
taatagtaccaattagtacaaagaaggcattatataataaagcatgtatgagtttgggtaaatgaagttgaagcactaattaagatccgaaacgagtttc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45756199 |
taatagtaccaattagtacaaagaaggcattatataataaagcatgtatgcgtttgggtaaatgaagttgaagcactaattaagatccgaaacgagtttc |
45756298 |
T |
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| Q |
316 |
atct |
319 |
Q |
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|||| |
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| T |
45756299 |
atct |
45756302 |
T |
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