View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7017_low_44 (Length: 317)
Name: NF7017_low_44
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7017_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 50639168 - 50639468
Alignment:
| Q |
1 |
tatattatgcacggaaattttgctggacagctttaatagtacttaagacgaacattaatgatctgtataaactgttacattcaacttgcaaacactgccc |
100 |
Q |
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| T |
50639168 |
tatattatgcacggaaattttgctggacagctttaatagtacttaagatgaacattaatgatctgtataaactgttacattcaacttgcaaacactgccc |
50639267 |
T |
|
| Q |
101 |
aacgaaaccacttatgaaaaatgataatatttgtacaaagttgtttcagttataattgtgcatcatggtactgcctatccaatatgtatctttcagatta |
200 |
Q |
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| T |
50639268 |
aacgaaaccacttatgaaaaatgataatatttgtacaaagttgtttcagttataattgtgcatcatggtactgcctatccaatatgtatctttcagatta |
50639367 |
T |
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| Q |
201 |
caactgctgatcagtaaacaagtcagcaccttctgcccacatgaaatctgcagactttattgcctttctatgattttgatttgatattttgagtatgtaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50639368 |
caactgctgatcagtaaacaagtcagcaccttctgcccacatgaaatctgcagactttattgcctttctatgattttgatttgatattttgagtatgtaa |
50639467 |
T |
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| Q |
301 |
a |
301 |
Q |
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| T |
50639468 |
a |
50639468 |
T |
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