View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7017_low_56 (Length: 269)
Name: NF7017_low_56
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7017_low_56 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16420625 - 16420872
Alignment:
| Q |
1 |
gaaatgagtttttaatcatgataagatatttctaacccaacttatactcatgaatacaaagacaaaccagaatagaattaataataggttgaaagtatct |
100 |
Q |
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| T |
16420625 |
gaaatgagtttctaatcatgataagatatttctaacccaacttatactcatgaatacaaagacaaatcaggatagaattaataataggttgaaagtatct |
16420724 |
T |
|
| Q |
101 |
tgtcaagtgtatcaaacgaaatatatgaatatg--atagagttatcatatcatattttagcatggccatcatattggtacatctatgtgtgtgtataagg |
198 |
Q |
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| T |
16420725 |
tgtcaagtgtatcaaacgaaatatatgaatatgatatagagttatcatatcatgttttagcatgaccatcatactggtacacctatgtgtgtgtataagg |
16420824 |
T |
|
| Q |
199 |
acaaaaccaaataaactactaggatggtaaaaattaacattcttatgt |
246 |
Q |
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||||||||||| ||||||||||||||||||||||||||| |||||||| |
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| T |
16420825 |
acaaaaccaaacaaactactaggatggtaaaaattaacactcttatgt |
16420872 |
T |
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